How Cells Release Chemical Energy Chapter 8 Impacts, Issues: When Mitochondria Spin Their Wheels More than forty disorders related to defective mitochondria are known (such as Friedreich’s ataxia); many of those afflicted die young 8.1 Overview of Carbohydrate Breakdown Pathways Photoautotrophs make ATP during photosynthesis and use it to synthesize glucose and other carbohydrates Most organisms, including photoautotrophs, make ATP by breaking down glucose and other organic compounds Comparison of the Main Pathways Aerobic respiration • Aerobic metabolic pathways (using oxygen) are used by most eukaryotic cells Fermentation • Anaerobic metabolic pathways (occur in the absence of oxygen) are used by prokaryotes and protists in anaerobic habitats Comparison of the Main Pathways Aerobic respiration and fermentation both begin with glycolysis, which converts one molecule of glucose into two molecules of pyruvate After glycolysis, the two pathways diverge • Fermentation is completed in the cytoplasm, yielding 2 ATP per glucose molecule • Aerobic respiration is completed in mitochondria, yielding 36 ATP per glucose molecule Comparison of the Main Pathways Fig. 8-2b, p. 124 A Carbohydrate breakdown pathways start in the cytoplasm, with glycolysis. B Fermentation pathways are completed in the semifluid matrix of the cytoplasm. C In eukaryotes, aerobic respiration is completed inside mitochondria. Fig. 8-2b, p. 124 Animation: Where pathways start and finish Overview of Aerobic Respiration Three stages • Glycolysis • Acetyl-CoA formation and Krebs cycle • Electron transfer phosphorylation (ATP formation) C6H12O6 (glucose) + O2 (oxygen) → CO2 (carbon dioxide) + H2O (water) • Coenzymes NADH and FADH2 carry electrons and hydrogen Overview of Aerobic Respiration Cytoplasm glucose 2 ATP ATP Glycolysis 4 ATP (2 net) ATP 2 NADH 2 pyruvate Krebs Cycle 6 CO2 2 ATP ATP 8 NADH, 2 FADH2 ATP oxygen Electron Transfer Phosphorylation 32 ATP A The first stage, glycolysis, occurs in the cell’s cytoplasm. Enzymes convert a glucose molecule to 2 pyruvate for a net yield of 2 ATP. During the reactions, 2 NAD+ pick up electrons and hydrogen ions, so 2 NADH form. Mitochondrion B The second stage occurs in mitochondria. The 2 pyruvates are converted to acetyl–CoA, which enters the Krebs cycle. CO2 forms and leaves the cell. 2 ATP form. During the reactions, 8 NAD+ and 2 FAD pick up electrons and hydrogen ions, so 8 NADH and 2 FADH2 also form. C The third and final stage, electron transfer phosphorylation, occurs inside mitochondria. 10 NADH and 2 FADH 2 donate electrons and hydrogen ions to electron transfer chains. Electron fl ow through the chains sets up H+ gradients that drive ATP formation. Oxygen accepts electrons at the end of the chains. Fig. 8-3a, p. 125 Cytoplasm glucose 2 ATP ATP Glycolysis 4 ATP (2 net) ATP 2 NADH 2 pyruvate Krebs Cycle 6 CO2 2 ATP ATP 8 NADH, 2 FADH2 ATP oxygen Electron Transfer Phosphorylation 32 ATP A The first stage, glycolysis, occurs in the cell’s cytoplasm. Enzymes convert a glucose molecule to 2 pyruvate for a net yield of 2 ATP. During the reactions, 2 NAD+ pick up electrons and hydrogen ions, so 2 NADH form. Mitochondrion B The second stage occurs in mitochondria. The 2 pyruvates are converted to acetyl–CoA, which enters the Krebs cycle. CO2 forms and leaves the cell. 2 ATP form. During the reactions, 8 NAD+ and 2 FAD pick up electrons and hydrogen ions, so 8 NADH and 2 FADH2 also form. C The third and final stage, electron transfer phosphorylation, occurs inside mitochondria. 10 NADH and 2 FADH 2 donate electrons and hydrogen ions to electron transfer chains. Electron fl ow through the chains sets up H+ gradients that drive ATP formation. Oxygen accepts electrons at the end of the chains. Stepped Art Fig. 8-3a, p. 125 Fig. 8-3b, p. 125 Animation: Overview of aerobic respiration 8.1 Key Concepts: Energy From Carbohydrate Breakdown Various degradative pathways convert the chemical energy of glucose and other organic compounds to the chemical energy of ATP Aerobic respiration yields the most ATP from each glucose molecule; in eukaryotes, it is completed inside mitochondria 8.2 Glycolysis – Glucose Breakdown Starts Glycolysis starts and ends in the cytoplasm of all prokaryotic and eukaryotic cells An energy investment of ATP starts glycolysis Glycolysis Two ATP are used to split glucose and form 2 PGAL, each with one phosphate group Enzymes convert 2 PGAL to 2 PGA, forming 2 NADH Four ATP are formed by substrate-level phosphorylation (net 2 ATP) Glycolysis glycolysis occurs in the cytoplasm Animal Cell (eukaryotic) Plant Cell (eukaryotic) Bacterial Cell (prokaryotic) Fig. 8-4a, p. 126 Fig. 8-4a (1), p. 126 Fig. 8-4a (2), p. 126 Fig. 8-4b, p. 127 Fig. 8-4b (1), p. 127 ATP-Requiring Steps Glycolysis A An enzyme transfers a phosphate group from ATP to glucose, forming glucose6-phosphate. glucose ATP ADP glucose-6-phosphate ATP ADP fructose-1,6-bisphosphate B A phosphate group from a second ATP is transferred to the glucose6- phosphate. The resulting molecule is unstable, and it splits into two three- carbon molecules. The molecules are interconvertible, so we will call them both PGAL (phosphoglyceraldehyde). So far, two ATP have been invested in the reactions. Fig. 8-4b (1), p. 127 Fig. 8-4b (2), p. 127 2 PGAL 2 NAD+ + 2 Pi NADH 2 reduced coenzymes 2 PGA 2 ADP ATP 2 ATP produced by substrate-level phosphorylation 2 PEP 2 ADP ATP 2 pyruvate 2 ATP produced by substrate-level phosphorylation Net 2 ATP + 2 NADH to second stage ATP-Generating Steps C Enzymes attach a phosphate to the two PGAL, and transfer two electrons and a hydrogen ion from each PGAL to NAD+. Two PGA (phosphoglycerate) and two NADH are the result. D Enzymes transfer a phosphate group from each PGA to ADP. Thus, two ATP have formed by substratelevel phosphorylation. The original energy investment of two ATP has now been recovered. E Enzymes transfer a phosphate group from each of two intermediates to ADP. Two more ATP have formed by substrate-level phosphorylation. Two molecules of pyruvate form at this last reaction step. F Summing up, glycolysis yields two NADH, two ATP (net), and two pyruvate for each glucose molecule. Fig. 8-4b (2), p. 127 Animation: Glycolysis 8.2 Key Concepts: Glycolysis Glycolysis is the first stage of aerobic respiration and of anaerobic routes such as fermentation pathways Enzymes of glycolysis convert glucose to pyruvate 8.3 Second Stage of Aerobic Respiration The second stage of aerobic respiration finishes breakdown of glucose that began in glycolysis Occurs in mitochondria Includes two stages: acetyl CoA formation and the Krebs cycle (each occurs twice in the breakdown of one glucose molecule) Acetyl CoA Formation In the inner compartment of the mitochondrion, enzymes split pyruvate, forming acetyl CoA and CO2 (which diffuses out of the cell) NADH is formed The Krebs Cycle Krebs cycle • A sequence of enzyme-mediated reactions that break down 1 acetyl CoA into 2 CO2 • Oxaloacetate is used and regenerated • 3 NADH and 1 FADH2 are formed • 1 ATP is formed Inside a Mitochondrion Fig. 8-5a, p. 128 outer membrane (next to cytoplasm) inner membrane inner mitochondrial compartment outer mitochondrial compartment (in between the two membranes) Fig. 8-5a, p. 128 Fig. 8-5b, p. 128 glucose (glycolysis) 2 pyruvate OUTER COMPARTMENT 6 2 acetyl-CoA Krebs Cycle CO2 2 ATP 8 NADH 2 FADH2 INNER COMPARTMENT Breakdown of 2 pyruvate 6 CO2 yields 2 ATP. Also, 10 coenzymes (8 NAD+, 2 FAD) are reduced. The coenzymes carry hydrogen ions and electrons to the third stage of aerobic respiration. Fig. 8-5b, p. 128 Animation: Functional zones in mitochondria Acetyl CoA Formation and the Krebs Cycle A An enzyme splits a pyruvate molecule into a two-carbon acetyl group and CO2. Coenzyme A binds the acetyl group (forming acetyl–CoA). NAD+ combines with released hydrogen ions and electrons, forming NADH. Acetyl–CoA Formation pyruvate NAD+ coenzyme A NADH CO2 B The Krebs cycle starts as one carbon atom is transferred from acetyl– CoA to oxaloacetate. Citrate forms, and coenzyme A is regenerated. acetyl–CoA coenzyme A H The final steps of the Krebs cycle regenerate oxaloacetate. citrate C A carbon atom is removed from an intermediate and leaves the cell as CO2. NAD+ combines with released hydrogen ions and electrons, forming NADH. D A carbon atom is removed from another intermediate and leaves the cell as CO2, and another NADH forms. CO2 oxaloacetate Krebs Cycle NAD+ G NAD+ combines with hydrogen ions and electrons, forming NADH. NADH NADH NAD+ CO2 NAD+ FADH2 FAD NADH Pyruvate’s three carbon atoms have now exited the cell, in CO2. ADP + Pi ATP F The coenzyme FAD combines with hydrogen ions and electrons, forming FADH2. E One ATP forms by substrate-level phosphorylation. Stepped Art Fig. 8-6, p. 129 Animation: The Krebs Cycle - details 8.4 Aerobic Respiration’s Big Energy Payoff Many ATP are formed during the third and final stage of aerobic respiration Electron transfer phosphorylation • Occurs in mitochondria • Results in attachment of phosphate to ADP to form ATP Electron Transfer Phosphorylation Coenzymes NADH and FADH2 donate electrons and H+ to electron transfer chains Active transport forms a H+ concentration gradient in the outer mitochondrial compartment H+ follows its gradient through ATP synthase, which attaches a phosphate to ADP Finally, oxygen accepts electrons and combines with H+, forming water Electron Transfer Phosphorylation Summary: The Energy Harvest Typically, the breakdown of one glucose molecule yields 36 ATP • Glycolysis: 2 ATP • Acetyl CoA formation and Krebs cycle: 2 ATP • Electron transfer phosphorylation: 32 ATP Summary: Aerobic Respiration Animation: Third-stage reactions 8.3-8.4 Key Concepts: How Aerobic Respiration Ends The final stages of aerobic respiration break down pyruvate to CO2 Many coenzymes that become reduced deliver electrons and hydrogen ions to electron transfer chains; energy released by electrons flowing through the chains is captured in ATP Oxygen accepts electrons at ends of the chains 8.5 Anaerobic Energy-Releasing Pathways Fermentation pathways break down carbohydrates without using oxygen The final steps in these pathways regenerate NAD+ but do not produce ATP Fermentation Pathways Glycolysis is the first stage of fermentation • Forms 2 pyruvate, 2 NADH, and 2 ATP Pyruvate is converted to other molecules, but is not fully broken down to CO2 and water • Regenerates NAD+ but doesn’t produce ATP Provides enough energy for some single-celled anaerobic species Two Pathways of Fermentation Alcoholic fermentation • Pyruvate is split into acetaldehyde and CO2 • Acetaldehyde receives electrons and hydrogen from NADH, forming NAD+ and ethanol Lactate fermentation • Pyruvate receives electrons and hydrogen from NADH, forming NAD+ and lactate Two Pathways of Fermentation Fig. 8-9a, p. 132 Glycolysis glucose 2 NAD+ 2 ATP 2 NADH 4 ATP pyruvate Alcoholic Fermentation 2 CO2 acetaldehyde 2 NADH 2 NAD+ ethanol Fig. 8-9a, p. 132 Fig. 8-9b, p. 132 Glycolysis glucose 2 NAD+ 2 ATP 2 NADH 4 ATP pyruvate Lactate Fermentation 2 NADH 2 NAD+ lactate Fig. 8-9b, p. 132 Glycolysis 2 ATP glucose 2 NAD+ 2 NADH Glycolysis 2 ATP 2 NADH 4 ATP 4 ATP pyruvate pyruvate Alcoholic Fermentation glucose 2 NAD+ 2 CO2 acetaldehyde Lactate Fermentation 2 NADH 2 NAD+ 2 NADH 2 NAD+ lactate ethanol Stepped Art Fig. 8-9, p. 132 Animation: Fermentation pathways Alcoholic Fermentation Fig. 8-10a, p. 133 Fig. 8-10b, p. 133 Fig. 8-10c, p. 133 8.6 The Twitchers Slow-twitch muscle fibers (“red” muscles) make ATP by aerobic respiration • Have many mitochondria • Dominate in prolonged activity Fast-twitch muscle fibers (“white” muscles) make ATP by lactate fermentation • Have few mitochondria and no myoglobin • Sustain short bursts of activity Sprinters and Lactate Fermentation Fig. 8-11b, p. 133 8.5-8.6 Key Concepts: How Anaerobic Pathways End Fermentation pathways start with glycolysis Substances other than oxygen accept electrons at the end of the pathways Compared with aerobic respiration, the net yield of ATP from fermentation is small 8.7 Alternative Energy Sources in the Body Pathways that break down molecules other than carbohydrates also keep organisms alive In humans and other mammals, the entrance of glucose and other organic compounds into an energy-releasing pathway depends on the kinds and proportions of carbohydrates, fats and proteins in the diet The Fate of Glucose at Mealtime and Between Meals When blood glucose concentration rises, the pancreas increases insulin secretion • Cells take up glucose faster, more ATP is formed, glycogen and fatty-acid production increases When blood glucose concentration falls, the pancreas increases glucagon secretion • Stored glycogen is converted to glucose Energy From Fats About 78% of an adult’s energy reserves is stored in fat (mostly triglycerides) Enzymes cleave fats into glycerol and fatty acids • Glycerol products enter glycolysis • Fatty acid products enter the Krebs cycle Compared to carbohydrates, fatty acid breakdown yields more ATP per carbon atom Energy from Proteins Enzymes split dietary proteins into amino acid subunits, which enter the bloodstream • Used to build proteins or other molecules Excess amino acids are broken down into ammonia (NH3) and various products that can enter the Krebs cycle Alternative Energy Sources in the Human Body FOOD FATS fatty acids glycerol acetyl–CoA PGAL COMPLEX CARBOHYDRATES PROTEINS glucose, other simple sugars amino acids acetyl–CoA Glycolysis NADH pyruvate Krebs Cycle oxaloacetate or another intermediate of the Krebs NADH, FADH2 Electron Transfer Phosphorylation Fig. 8-12, p. 135 FOOD FATS fatty acids acetyl–CoA glycerol COMPLEX CARBOHYDRATES PROTEINS glucose, other simple sugars amino acids acetyl–CoA PGAL Glycolysis NADH pyruvate Krebs Cycle oxaloacetate or another intermediate of the Krebs NADH, FADH2 Electron Transfer Phosphorylation Stepped Art Fig. 8-12, p. 135 Animation: Alternative energy sources 8.7 Key Concepts: Other Metabolic Pathways Molecules other than glucose are common energy sources Different pathways convert lipids and proteins to substances that may enter glycolysis or the Krebs cycle 8.8 Reflections on Life’s Unity Life’s diversity and continuity arise from unity at the level of molecules and energy • Energy inputs drive the organization of molecules into cells (one-way flow of energy) Energy from the sun sustains life’s organization • Photosynthesizers use energy from the sun to feed themselves and other forms of life • Aerobic respiration balances photosynthesis Links Between Photosynthesis and Aerobic Respiration energy in (mainly from sunlight) Photosynthesis glucose, oxygen Aerobic Respiration carbon dioxide, water energy out (ATP, heat) energy out (ATP, heat) Fig. 8-13, p. 136 Animation: Electron transfer phosphorylation Animation: Electron transfer system and oxidative phosphorylation Animation: Krebs cycle overview Animation: Links with photosynthesis Animation: Recreating the reactions of glycolysis Video: When mitochondria spin their wheels