Yashwantrao Chavan Maharashtra Open University Graduate Degree Programme: B.Sc. in Bio-Technology, Bio-Informatics and Genetics SBT/ SBI/ SGS035: Lab Course B. Sc. (BT, BI, GS) Semester 3 Lab Workbook 1 Yashwantrao Chavan Maharashtra Open University Vice-Chancellor-Dr. Rajan Welukar Expert Advisory Committee Mr. Manoj Killedar Director, School of Science & Technology, Y.C.M. Open University, Nashik Mrs. Sunanda More School of Science & Technology, Y.C.M. Open University, Nashik Mrs. Chetana Kamlaskar School of Science & Technology, Y.C.M. Open University, Nashik Dr. Sunil Ganatra 135, Krushnakunj, Toata Colony, Lakadganj, Nagpur Prof. Indira Ghosh Bio-Informatics Center, University of Pune, Pune Prof. Urmila Kulkarni-Kale Bio-Informatics Center, University of Pune, Pune Prof. Dr. Piyali Kar Maharashtra Education Foundation, CBD Belapur, Navi Mumbai Course Writers Mrs Sheetal Mhaske and Ms Manjiri Ukey G.H.Raisoni Institute of Interdisciplinery Sciences, Pune - 01 Course Editor Mrs Nandini Joshi-Kotharkar G.H.Raisoni Institute of Interdisciplinery Sciences, Pune - 01 Course Coordinator and IT Editor Mrs. Sunanda More School of Science & Technology, Y.C.M. Open University, Nashik E-Production Manoj Killedar, Director, School of Architecture, Science & Technology E-Version available at http://www.ycmou.com=>Architecture, Science and Technology=>Online Prospectus =>Syllabus & Learning Resource => SBT => Sem03 © Yashwantrao Chavan Maharashtra Open University, Nashik Printed & Published by: Shri. S.P. Kowale, Registrar, Y.C.M. Open University, Nashik 2 CERTIFICATE This is to certify that Mr./Mrs./Smt. ……………………………………………………………………. has successfully completed experiment as per the following details: (1) Total number of experiment completed: ……………….………………… (2) Serial number of experiment completed: ………………………………… Laboratory Instructor Name : ……………………………………….……………………. Signature & date : ………………………………………….……………………… Programme co-ordinator Name: ………………………………….…………….………… Signature & date : ……………………………………….……………………… External Examiner Name : …………………………………………….….………………… Signature & date : ………………………………..…………….……………………………… 3 List of Experiments of Semester 03 Biotechnology Lab Sr.No Name of Experiment 1. Preparation of solutions of given molarity, molality and normality. 2. Preparation of buffers of specified pH using pH meter. 3. Quantitative analysis of carbohydrates and non carbohydrate: glucose, fructose, maltose, lactose, galactose, protein, lipids, creatinine and urea 4. Spot test for amino acids. 5. Detection of sugar, glucose and albumin from urine. 6. Demonstration of different equipment and techniques used in microbiology 7. Preparation of nutrient slant, and broth 8. Preparation of cotton plugs 9. Isolation of single colony on solid media : Streak plate and Spread plate method 10. Enumeration of bacteria by i)Breed method (ii) Pour plate method 11. Staining techniques : Simple staining, Gram staining, Acid fast staining, Endospore staining and Viable count 12. Demonstration of presence of α-amylase in saliva 13. Estimation of blood glucose by Nelson-Somogyi method 14. RBC count 15. WBC count 16. Measurement of blood pressure by spygmomanometer 17. Estimation of protein by Lowry’s method 18. Determination of acid value of fats 19. Determination of clotting time of blood by capillary tube method 20. Assay of hemoglobin by haemoglobinometer 21. Differential leukocytes count of blood 22. Colorimetric estimation of protein by biuret method 23. Detection of bacterial motility by hanging drop method 24. Oligodynamic activity test of metals Page No. 4 BASIC RULES OF A MICROBIOLOGY LABORATORY A microbiology laboratory is a place for working with a variety of microorganisms. Since several culture media are prepared and organic materials are present, the chances exist for the presence of high spectrum of microbial community. Secondly, while working with pure culture one should always follow the microbiological rules so that neither the experiment should be unsuccessful nor any hazard may occur. If a large number of students are working in a microbiology laboratory, they should be aware what to do or what not? What are the apparatus/instruments/equipments present in the laboratory and what is their functioning? What are the chemical solutions and stains and how to handle? How should the students enter in the microbiology laboratory and how should they work? Therefore, the fresher such as students, teachers, laboratory assistants and helper must follow the following guidelines: 1) Always wear an apron (a white coat or gown) before entering the microbiology laboratory to protect from microbial contamination and laboratory hazards. At regular intervals get the apron washed. 2) Cut nails regularly. 3) Tie long hairs back to avoid contamination and fire hazard. 4) Keep your working laboratory bench clean of everything. Nothing should be laying on the bench. 5) Never keep books, purses, bags, etc. on the working bench. 6) Always wash your hands with soap in running tap water before and after the work. 7) Clean your working bench with ethanol (70%) or phenol (1:100). 8) Never spit and smoke in the laboratory. 9) Don’t put anything of the laboratory (e. g. pencil, thread, labels, inoculation needle, pins, etc) in your mouth, ears, nose and eyes. 10) Don’t put your fingers in your eyes, ears, mouth. It may facilitate the chance of infection by pathogenic microorganisms. 11) Don’t eat or drink or talk while working with microorganisms. 12) Don’t mishandle the chemical solution, stains, spirit lamp, UV light, instruments/apparatus or electricity. 5 13) Always keep the burner at distance from the organic solvents. Your sincere care will avoid fire accident. The burner must be turned off soon after the use. 14) Always maintain aseptic condition while working with microorganisms. 15) Always use flame sterilized inoculation needle/loop. 16) Don’t open the culture tubes/plates directly and never inhale them nor observe with naked eyes. 17) Open the culture tubes/plates near the vicinity of flame of the burner. 18) While working with broth culture don’t suck the suspension with mouth. Always use pipette sucker. 19) After completion of work always label the cultures with names, code and date of work. It will help recording the data. 20) Always keep plates in tiers and culture tubes in upright in basket or racks. Finally, transfer all the culture in the incubator at desired temperature of where ever to keep. 21) Never leave your cultures on working table or seat. 22) Clean the working table/bench when the work is completed. 23) Clean lenses of objective with tissue paper. 24) Keep the stains, reagents, stock cultures to their respective places when the work is completed. 25) After completion of work keep your slides/pipette/culture tubes/plates in container and steam sterilize before washing. 26) Record your result at time. 27) For any difficulty, ask your laboratory assistant or concerned teachers. 6 Experiment No: 1 Aim: Preparation of solution of given Molarity, Molality and Normality. Theory and Principle: Normality: The number of gram equivalent of the solute present per liter of its solution . N = Weight in gram of solute/ litre of solution Equivalent weight in gram. Or = equivalent weight/ 1000. Molarity: Gram molecular weight of solute per litre of solution . M = Molecular weight of solute 1000ml of solvent . Molality : It represent the number of moles of solute present in 1000g of solvent . 1m = Molecular weight of compound 1000g of solvent. Procedure : 1. Weigh the required amount of solute. 2. Dissolve in required amount of solvent. A. Prepare 0.1N, 1M, 0.2M Solution of NaOH. Molecular weight of NaOH = 23+16+1 = 40 Equivalent weight of NaOH = molecular wt. No.of replaceable H/OH = 40 a. To prepare 0.1 N solution of NaOH . To prepare 1N solution: Dissolve 40g NaOH in 1000 ml of solvent. 0.1N NaOH=4g of NaOH in 1000 ml of solvent (Distilled Water) Molarity = Molecular weight / 1000ml of solvent . For 1M of NaoH : Dissolve 40g NaOH in 1000ml of solvent (D.W.) Molality = Molecular weight of compound 100g of solvent For water; volume = mass/ density = 1000ml = mass of water 1g/ml =1000g = mass of water For 1M of NaoH = 40g of NaoH dissolved in 1000ml of water Therefore, 0.2M Of NaoH= 8g of NaoH dissolved in 1000ml of water. B. To prepare 0.5N, 2M, 0.4M of HCL in 1000ml of solvent Molecular Weight of HCl = 1+35.5=36.5 7 For HCl specific gravity = 1.18 Volume = Mass/specific gravity =36/1.18 = 30.51ml Therefore for 1N HCl = Dissolve 30.51ml of HCl in 1000ml of solvent (D.W.) For 0.5N HCl = 15.25ml Of Hcl in 1000ml of solvent (D.W.) For 1M HCl =Dissolve 30.51ml of Hcl in 1000ml of solvent(D.W.) For 2M HCl =Dissolve 61.02ml of Hcl in 1000ml of Solvent(D.W.). Result: 8 Experiment No: 2 Aim: - Preparation of buffer of specified pH using pH meter. Theory:- Buffers are defined as substances that resist changes in the pH of the system. Weak acids or bases,in the presence of their salts with strong bases or strong acids respectively form buffer system. Ex: Phosphate/monohydrogen phosphate. Carbonic acid/bicarbonate Proteins/proteinate. pH:- The pH of the solution is the value with which defines its hydrogen ion concentration in aqueous solution, it is relative strength of hydrogen ion reach species called acid and the hydrogen ion deficient species called base which determines the net pH of a solution. Measurement of pH :pH indicators:- These are usually organic compounds of natural or synthetic origin whose colour is dependent on the pH of the solution. Indicators are dependent on the pH of the solution. Indicators are usually weak acids which dissociates in solution. pH meter:- The most reliable and accurate method for the routine measurement of pH is the pH meter in which a change in pH is measured as change in electrical potential. If a metal rod is placed in solution of its salt, it acquires potential. If two dissimilar metals are dipped into the solution of their salts, the difference in potential can be measured or calculated from the two separate potentials. The standard electrode is thus required against which the potential of other electrodes can be compared. This is the “standard hydrogen electrode”, consisting of platinum rod dipped in the aqueous solution with a given H+ activity in which hydrogen gas is bubbled continuously at 1 atmospheric pressure. But this is too cumbersome to be used, as reference electrode for routine use, other secondary reference electrode of known potential in relation to standard hydrogen electrode are used. Example:- Calomel electrode, glass electrode. Precautions:1. The glass electrode is fragile and must be handled with care. 2. Electrode must not be left to dry. 3. The temperature compensation dial must be set before it is 9 Calibrated as potential is produced dependent on temperature. 4. The meter must be calibrated first with a standard buffer of pH 7 and then with pH 4 or pH 9. Procedure:1. Prepare the solution of given molarity as per the table. 2. Do the addition for specific buffer as per the table. 3. Make up the volume up to 1000ml. 4. Check the pH with the help of pH meter. Observation Table:S.No 1 2 pH 2 4 3 6 4 5 9 10 Solution To Be Used 0.2M KCl + 0.2M HCl 0.2M succinic acid + 0.2M NaOH 0.2M succinic acid + 0.2M NaOH 0.1M KCl + 0.1M H3BO3 1M NaHCO3 + 1M Na2CO3 Volume In ml 65ml + 250ml 250ml + 100ml 250ml + 435ML 250ml+250ml+208ml 13.8ml + 12ml Result:- 10 Experiment No.3 Aim: Quantative analysis of carbohydrates and non carbohydrate: glucose ,fructose, maltose lactose, galactose protein, lipids, creatinine and urea. Principle: The Benedict’s quantitative reagent contains potassium thiocynate and potassium Ferro cyanide in addition to sodium citrate,sodium carbonate and CuSO4.Glucose reduces cupric ions in solution to cuprous ions which react with potassium thiocynate to form white colored cuprous thiocynate. The small amount of potassium thiocynate acid is keeping cuprous oxide in solution. As precipitate formed is white. The loss of all blue color is readily observed which indicates complete reduction of cupric ions. Requirements: I Chemicals 1. Benedict’s reagent 2. 1% Glucose 3. 1% fructose 4. 1% Lactose 5. 1% Maltose 6. 1% Galactose II Apparatus: 1. Test tubes 2. Pipettes 3. Water Bath Procedure: 1. Take 5ml of Benedicts solution reagent and 2ml of Carbohydrate sample. 2. Boil in water bath for 5 min. Observation: Observe the color change with respect to carbohydrate use, Glucose, fructose gives dark brown color Maltose galactose gives orange color Sucrose turns colorless. Result: 11 Experiment No.4 Aim: Spot test for amino acids. Principle: Chromatography is a method by which members of groups are separated using continuous distribution and redistribution between two phases: I. Stationary phase II. Mobile phase A liquid – Liquid chromatographic system is used to separate amino acid. What man No.1 filter paper is used as a supporting medium. Cellulose in What man No.1 filter paper makes an ideal support medium where water is observed between the cellulose fibers and forms a stationary hydrophilic phase. A small amount (2-3 µl) of amino acid solution is applied on the What man no.1 sheet and it is introduced to liquid- liquid system(Reservoir Buffer),various amino acids get separated according to their respective Rf values. The separated amino acids are stained by ninhydrin reagent which reacts with the amino acid to from violet complex. Requirements: 1.Alanine 2.Methionine 3.Valine 4.Lysine 5.Test amino Acid sample 1 6.Test amino Acid sample 2 7. Whatman No.1filter paper. 8.Capillary tube 9.Reservior Buffer Procedure : 1. Add sufficient quantity of the reservoir buffer system in the chromatography container. Cover it with an airtight lid. 2. Perform the experiment next day (i.e. after 18-24 hrs) so that the container becomes saturated with the vapors of the reservoir buffer system 3. Mark six points with the help of pencil leaving 2-3 cm distance from the base on one of the side of the Whatman No.1 paper for application of the standard and test amino acid samples. 4. By using separate glass capillary for separate standards and samples apply each solution on the marked point of application. 12 5. Tide the other end of the Whatman No.1 paper with the thread or some other support to keep it exactly straight when dipped in reservoir buffer. 6. Allow the reservoir buffer to run until it reaches near the periphery of paper. 7. Remove the paper from the reservoir tank. Mark the solvent front. 8. Dry this paper in hot air over(at 100 0C) for 5 to 10 minutes. 9. Spray dried paper with ninhydrin solution. 10. Make the spots of separated amino acid and determine their Rf values. Result: 13 Experiment No.5-a Aim: Detection of glucose from Urine Principle: When Benedict’s quantitative reagent (5ml) is heated with eight drops of urine (about 0.5 ml) glucose present in urine reduces cupric ions present in the regent to cuprous ions. Alkaline medium is provide to the cuprous ions. Alkaline medium is provided to the reaction by sodium carbonate present in the reagent. The original colour of Benedict’s reagent is blue. It changes to green, yellow, orange and red according to the concentration of glucose present in urine. Requirements: Chemicals 1. Benedict’s reagent 2. Urine sample Apparatus: 1. Test tubes 2. Burner 3. Water bath Procedure: 1. Take 5ml benedict’s solution ,Add 0.5 ml or 8 drops of urine sample. 2. Boil in water bath for 5 min 3. Observe in color change. Result: 14 Experiment No.5-b Aim: Detection of albumin in urine. Principle:All the methods are based on the principle of precipitation of protein by chemical agents (acids) or co-agulation by heat. If the turbidity is due to phosphate precipitation, it will clear. RequirementsChemicals:Glacial acetic acid Urine Sample Appratus:Test Tubes Burner Procedure : 1.Take 5-10 ml of clear urine in test tube. 2.Boil the upper portion over flame. 3.If the turbidity develops , add 1-2 drops of glacial acedic acid. 4. The turbidity is due to phosphate precipitation, it will clear. 5.Reboil the specimen. Observation :No formation turbidity at upper portion of urine indicates absence of protein in urine. Result:- 15 Experiment No:- 6 Aim: - Demonstration of different equipments and techniques used in microbiology. Common Glassware: The most glassware used in a microbiological laboratory are: test tubes, culture tubes, Petri dishes, Erlenmeyer flasks, measuring cylinder, pipettes, glass spreader, volumetric flasks, screw-capped glass bottles, haemocytometer, etc. I Test tube, culture tube and screw-capped tubes: 1.These are made up of glass, one-end of which is closed and the other end open. 2. If the side wall of the open end is slightly curved out side, it is called test tube; if the side wall is smooth, it is called culture tube. When the side wall of the tube has screws so that a plastic cap may be fitted, it is called screw-capped tube. 3. These are used in microbiological laboratory. 4. The test tubes are used for testing the chemicals such as pH, etc.Culture tubes are used for preparation of agar slants and purification of microorganisms. The open end is plugged with non-absorbent cotton plug. 5. Some times the microorganisms are purified and preserved in screw-capped tubes. II Petri dish:1. It consists of two shallow glass dishes, the upper half or lid and the lower half or bottom half. 2. For isolation and cultivation of different types of microorganisms these dishes are used. 3. According to the requirement, its diameter varies. 4. Molten agar medium is aseptically poured on the bottom half of the sterilized Petri dish and then covered with the upper half. 5. The Petri dishes are sterilized by putting them in a Petri dish container and in turn in an oven/autoclave. 6. Now, disposable sterile plastic Petri dishes are also available for the same purpose. III. Pipette 1. It is a cylindrical and graduated glass apparatus. 2. Its one end (lower side) tapers, while the other end (mouth piece) is normal. The middle portion is wider or of the same size as mouth end. 16 3. It is graduated with numbers 1, 2…..10. 4. It has different measuring capacity such as 0.1, 0.5, 1, 5, 10ml, etc. hence measures different quantities. 5. It is used for transferring appropriate amount of liquid in other containers. 6. It should be sterilized in an oven/autoclave before use by keeping in pipette container after being plugged with cotton. 7. For safety point, liquid should be sucked by attaching pipettesucker at the normal end of pipette. 8. Pipettes should be sterilized by keeping them first in a steal can (steal container) the steal can then is sterilized at 121o C for 30 minutes. IV Pasteur pipette 1. The Pasteur pipette can be made by selecting a hollow glass tube of similar diameter as of standard pipette or graduated pipette of which one end is heated so as to blow the glass to form a narrow end similar to 10 ml pipette. On another end, a rubber bulb is fitted. 2. Before being sterilized all the pipettes are usually plugged with cotton in order to avoid contamination. Pasteur pipettes are generally used once and then transferred into disinfectant. V. Erlenmeyer flasks 1.It has narrow beak at top with a opening and a broad bottom. 2.The flasks of different sizes, hence measure different volume such as 100, 250, 500, 1000, 2000ml liquid. 3.The flasks are of round bottom or flat bottom. 4.Some times the flasks are also graduated to represent the volume of liquid. 5.Certain modifications are made in Erlenmeyer flask according to requirement, for e.g. a beak is fabricated near the neck of the flask to connect to other equipment with rubber tubing. Such flasks are called side-arm flasks. 6.During sterilization cotton plug is inserted in the mouth of the flask. 7.It must be sterilized before microbiological usage. VI. Volumetric flasks 1. It is used to prepare solution of accurate strength. 17 2. Its upper part is cylindrical and narrow, and marked at a point. This mark denotes the water level to be maintained at this point. 3. The lower half is rounded and voluminous. 4. Its base is flat so that it may be properly placed on the surface. VII. Glass spreader 1. Glass spreader is made by bending a glass rod and making a L-shaped structure. 2. It is used to spread evenly the microorganisms on agar surface present in liquid medium. 3. The long arm is hold in hand and the small arm is flamesterilized and put on agar surface. 4. It is brought forth and back so that microorganisms present in liquid may be dissociated and evenly spread on entire surface of agar. VIII. Haemocytometer 1. It is used to measure the blood cells. 2. It is also used for counting the other cells viz, spores, bacteria, etc. 3. It consists of big squares. Each square has 1*1*0.1mm=0.1mm 4. There are 25 medium-sized squares in each large square where each medium squares is 0.2mm length, 0.2mmwidth and 0.1mm depth with a volume of 0.04mm3. 18 INSTRUMENTS I. Inoculation needle and inoculation loop. 1. These are the most commonly used tools. 2. Inoculation needle/loop is made up of a long platinum wire fixed into a metallic rod. 3. A wire loop has a handle with steel screw shaft in which nichrome or platinum wire is to be fitted. 4. The loop should be such so as to retain a small circular film in it by dipping in solution (5-7cm). 5. The needle straight wire is used for transferring culture from solid medium. II. Waterbath. 1. It is an instrument that is used to provide constant temperature. 2. Temperature is controlled through a thermostat. 3. It is more useful to microbiologist because it provides a uniform heat to the sample material mean for incubation. III. Autoclave. 1. The killing action of heat on the organisms can be done by using increase in the steam in a closed system. 2. Autoclave usually of pressure-cooker type made up of gun metal sheets which is supported in a iron case. 3. The steam passes from below at the base. The side walls are heated by steam jacket. 4. It is based on moist heat that used in sterilization. 5.Autoclave is usually operated at 15lb. /inch2 steam pressure for 30 minutes. This temperature for 30 minutes is 19 enough to kill all spores and cells of microorganism. IV. Laminar air flow. 1.It is an apparatus consist of an air blower in the rare side of the chamber. There is a special filter system of highefficiency particulate air filter (HEPA) which can remove as 0.3mn.Inside the chamber one florescent tube and the other UV tube are fitted. Switch on the UV light for 30 minutes before using it. 2.Due to uniform velocity and parallel flow of air current, pouring of media, plating, slant preparation, etc, without any kind of contamination are performed. V Incubators. 1. It is an instrument that consists of copper/ steel chamber, around which warm water or air is circulated by electric current or by means of small gas flame. 2. It is generally design that can allow the desired micro organism to grow at particular temperature. I. Hot air oven. 3. It is generally used for sterilization of glass ware, metal 20 devices and other articles which are spoiled by autoclaving. For such purposes dry heat sterilization is used.It kills the microbes by oxidizing there chemical constituent. 4.There is an in-built thermostat when required, it help in regulating the temperature. 5.For sterilization, if the temperature of oven is 160o, the holding time should be one hour but at 180oit should be 30 minutes. 6.The glass material should be wipe and dried before keeping inside the chamber in the oven. VI. pH meter 1. pH can be defined as a negative log of hydrogen ions concentration pH=-log10(H+)=7. 2. pH is the degree of acidity and alkalinity of a solution on a scale 1 to 14. 3. pH values 1 to 7 show the acid values, pH 7 neutrality and pH 7 to14 alkalinity. pH of water is 7at 25o C. 4. The acid is proton donor and base is proton accepter i.e. acid dissociates and produces hydrogen ion concentration(H+) 5. Maintenance of pH values is an important parameter for the growth and process of any organism. 6. A standard ph meter has two electrodes, one glass electrodes and second mercury-mercurous chloride (calomel) or silver-silver chloride reference electrode. The reference electrode is emerge in saturated KCl solution. 21 VII Water Distillation Unit - Metal (Wall Type) Water distillers produce highly treated and disinfected water for laboratory usage. The distillation process removes minerals and microbiological contaminants and can reduce levels of chemical contaminants. Water distillers are neither intended to treat water that is visually contaminated nor intended to convert waste water to safe, microbiologically Working Principle A water distiller works by boiling water into water vapour, condensing it and then returning it to its liquid state. It is collected in a storage container. The process occurs in several steps: 1. Municipal or well water is manually or automatically fed into the distiller unit’s boiling chamber. 2. A heating element in the boiling chamber heats the water until it boils. 3. The steam rises from the boiling chamber. Volatile contaminants (gases) are discharged through a built-in vent. Minerals and salts are retained in the boiling chamber as hard deposits or scale. 4. The steam enters a coiled tube (condenser), which is cooled by cool water. 5. Water droplets form as condensation occurs. 22 6. The distilled water is collected in a storage tank. If the unit is an automatic model, it is set to operate to fill the storage tank. Construction: Made of heavy gauge stainless sheet inside and outside, with immersion type heaters. The still provides continuous supply of pyroxene free distilled water and is equipped with brackets for wall mounting plug and cord and connector. Output 2 ltr/hour Output 4 ltr/Hour Output 6 ltr/Hour Power Requirements: To work on 220/230Volts, 50 Hz single phase AC supply. VIII Balance. 1. There are various types of balance used for weighing such as single pan, chemical or analytical and electric balances. 2. These balances are used according to requirement and the amount of the materials to be weighed. 23 IX Colorimeter 1. It is an instrument that utilizes light as a source of radiation and measures changes in optical density or absorbance. 2. It has three basic principals (i) The source of radiation (ii) a unit for dispersing the radiation at different wavelengths, (iii) a device that detect the amount of radiation at different wavelengths. 3. Spectrophotometer uses monochromatic (narrow wavelengths) radiation, whereas colorimeter uses broad wavelength bands. 4. For quantitative estimation the absorbance of different concentration of a substance can be measured following Beer’s law. The mathematical expression of Beer’s law is Log Io/I=Kc. Where, Io= Original intensity of light beam I = Intensity of beam passing through a solution C = Concentration of the solution in moles/I K = Constant A plot of absorbance (Y-axis) versus concentration (X-axis) yields a calibration curve. This shows the range of Beer’s law. It may be used for quantitative estimation. X Centrifuges 1. Centrifuges are the instruments which operate through the centrifugation technique. Centrifugation technique is based on molecular mass, shape and density of the particles. The rate or velocity at which particles sediment is proportional to force rate and velocity of sedimentation applied forces. The apply of larger force tan does the earth’s gravitational field, thus increase the rate of sedimentation of particles. The different particles sediment separately due to variation in their density, shape or size. 2. Principle of sedimentation: The centrifugal force is applied which induces the gravitational force of the materials present in a solution. The centrifugal force acts in a direction away from the centre of the axis. If the speed of rotation is faster, the force will be higher accordingly. However, the rate of sedimentation depends upon the applied centrifugal field (G). The G is the function of square of the angular velocity (radians/sec.) of the rotor and the radial distance (r, in cm) of the particles present from the axis of rotation. G=ω2 r. 3. Types of centrifuge : i. Small bench centrifuge. ii. Refrigerated centrifuge of large capacity. 24 iii. iv. High- speed refrigerated centrifuge. Ultracentrifuge. XI Microscope 1. For studying basic and applied microbiology, microscope holds an important place among all the tools required in a laboratory. The tiny microorganisms are visible only under microscope that are invisible to the naked eyes. Some are even colourless but some microscope with phase contrast attachment tends to visualize them in high resolution. The basic microscope consists of eyepiece (10Xmagnification) that is fitted inot the microscope tube. The magnification varies in ocular eyepiece. For identification, another low power lenses called objectives are used which have varying power (10X, 40X).For high magnification an oil immersion (100X) is also used. The oil immersion objective may bring the objectives close to bring in focus when rotated by the nosepiece carrier. The fine details are easily visible by oil immersion (100X) objective. The other part of microscope is stage with a mechanical holding device or simple clips. It has an iris diaphragm and a filter that is moved below the objective lens. The condenser consists of aplanatic lenses, has a numerical aperture of 1.3 to1.4 under high resolution. The microscope has light source (lamp) either built in or externally separately movable device located under the condenser, if fixed in position, directs the light up by tilting. The use of lamp with a lens projects sharp image resulting in improvement in observing the details of microorganism. 25 26 EXPERIMENT NO.7 Aim – I. Preparation of nutrient slant and broth. Principle:-When the autoclaved agar medium is poured in to the culture tubes and the later is placed in slanting positions, it gives agar slants after solidification. Requirements 1.Agar Medium (e.g. PDA(Potato dextrose agar), Nutrient agar Medium.) 2.Culture tubes 3.Test tube stand. 4. Aluminum foil or paper Procedure 1. Prepare nutrient medium as follows, Peptone 5.0 grm Beef extract 3.0 grm NaCl 5.0 grm Agar 15.0grm Distilled water 1000ml pH 7 - 7.4 2.Dispense 8- 10 ml of medium into each tube and put cotton plug and tie it with a rubber band. The amount of medium may be increased or decreased according to the volume of culture tubes. 3.Transfer all the tubes in to the a test tube stand or iron basket and autoclave at 121º C for 20 minutes. 4.Take out the culture tubes when temperature cools down and place them in slanting position by giving a support . Wait for about 30 minutes. 5.Thereafter, medium is solidified and agar slants are prepared. 6.Use the slants for culture transfer if required or store them for further use. II. Preparation of nutrient broth Principle : Bacteria are generally cultivated in broth ,i.e the medium devoid of agar. In fact requirement of nutrients is met by 27 supplementing beef extract(which is a source of mineral salts, organic carbon and nitrogen,vitamins,etc) and peptone (which is semi-digested protein).. Requirements HCL 1N NaOH 1N pH meter Distilled water Autoclave Culture tubes Glass rod Beaker Measuring cylinder Method of preparation of nutrient broth is as follows. Peptone 5.0 gm Beef extract 3.0 gm NaCl 5.0 gm Distilled water 1000ml pH 7.0 Procedure 1.Accurately weigh the chemical ingredients of the nutrient broth and transfer them into a beaker containing 500ml distilled water. 2.Dissolve the ingredients properly. 3.Add distilled water to make the volume to 1000ml. 4.Measure pH of the broth by using a pH meter and adjust the pH to 7.0 by adding drops of either HCL or NaOH solution. 5.Dispense 10ml to each culture tubes. 6.Put cotton plugs. 7. Transfer all the tubes in to the a test tube stand or iron basket and autoclave at 121º C for 20 minutes. 8. Take out the culture tubes when temperature cools down. 9. Use the broth tube when required or store them for further use. Result: 28 Experiment no.8 Aim : Preparation of cotton plugs. Microorganism are ubiquitous in distribution. It is difficult to study a particular type of microbe unless we know their ecological nature. The anaerobic bacteria do not require oxygen, while aerobic require ,and micro-aerophiles require but in a very low concentration .Therefore we need cotton plugs to create aerobic environment and making the growing culture free from undesired microbial contaminant. They are adhered on the surface of cotton fibres and therefore, prevented to enter inside the flasks, tubes, etc. Air facilitates the growth of microorganisms in glass apparatus. Requirements Non – absorbent cotton rolls Culture tubes Flasks Scissors Procedure 1.Procure a non absorbent cotton roll and remove its paking. 2.Open the roll as per requirement 3.Cut a small piece of cotton sheet with the help of scissors. Based on the requirement the following two types of cotton plugs are prepared. I. Cut, fold and rolled plug 1.Cut a small piece of cotton sheet with the help of scissors as per requirement. i.e flask/culture tube, etc 2.Fold the cut piece from the centre. 3.Roll the sheet from any of ends. Opposite to the folded side has cotton fibres that emerge out freely. 4.Insert the folded and rolled side in the neck/mouth of a flask/culture tube, and the other end of plug bears cotton fibres. 5.If it is tight, open the plug and remove some cotton from one side and readjust as earlier. II.Cut, rolled and fold plug 1. Cut a small piece of cotton sheet with the help of scissors. 29 2. Roll the piece from one end. 3. Fold the rolled piece from the centre. 4. Insert the folded end in the neck/mouth of a flask/culture tube, and the other end bearing cotton fibres out in air. Result:- 30 Experiment no.9 Aim:-Isolation of single colony on solid media: Streak plate and Spread plate method. Principle:-Generally, bacteria exist in mixed population. It is very rare to get a single and pure form. For studying the cultural, morphological, and physiological characters of an individual species, it is essential to separate them from the others to get in the form called pure culture.There are many important methods for isolating pure culture from mixed culture. I. Streak Plate Method from Mixed Culture to Pure Culture. The colonies on a mixed plate are separated by spreading on the plate with good spacing among each other using streak plate method. Requirements Tripod and wire gauze Bunsen burner Beaker of water Wire loop Nutrient agar pour Sterile Petri dish Mixed culture. Procedure 1. Liquefy a tube of nutrient agar and pour into the Petri dish, rotate the plate gently for uniform distribution of the medium. 2. Streak the plate following quadrant or radiant or T-streak or continuous streak. 3. Keep the streaked plates in inverted position at 250 c for 24-48 hrs. 4. Place the Petri dishes upside down to solve the problem of water condensation because if it drops down on the colonies, the organisms of one colony can spread on the other colony. Result 31 II. Spread Plate Method When inoculum is transferred into Petri dishes containing nutrient medium cells are not separated from each other. Therefore,there develop mixed colonies. Hence, isolation of pure culture from mixed colonies is rather difficult. Therefore, spread technique is employed. In this technique the propagules of microorganism are spread over solidified agar medium with the help of L-shaped glass tube called spreader when the Petri plate is spinning on a turn table. Requirements Nutrient broth culture of streptococcus pneumonae and Staphylococcus aureus Nurient agar plates Turn table L-shaped bent glass Ethanol(95%) Bunsen burner Beaker Incubator Inoculation loop. Procedure 1.Take three nutrient agar plates and label them 1,2 and 3 respectively. 2.Aseptically, innoculate plate 1 with a loopful culture of S.pneumonae, plate 2 with S.aureus and plate 3 with both S.pneumonae and S.aureus. 3. Place plate 1 on turn table (revolution platform). 4. Sterilize the bent L-form glass rod by putting it first in ethanol (95%)in a beaker, then on the flame of Bunsen burner and cool the rod for 30 second. 5. Remove the lid of petri plate and spin the turn table. 6. Very gently touch the bent L-form of the glass tube on the surface of agar and move it forth and back to spread bacterial cells on agar surface when the turn table is spinning. 7. When turn table stops running, put the lid over the lower half of petri dish. 8. Sterilise the L-shaped glass rod as in step 4. 9. Repeat steps 3 to 7 for plate 2 and 3 also. 10. Incubate all the plates at 250C for 24 hrs. 32 Result:- 33 Experiment No 10. Aim:- Enumeration of bacteria by Breed Method and Pour plate method. Breed Method Principle :-Term growth as commonly employed in bacteriology refers to the magnitude of total population .growth can be determine by various techniques one such technique is by determining the number of cells . Breed’s method is a direct method where the microscopic cells are counted. In Breed’s method both viable as well as dead cells are counted . Requirements: Bacterial culture Glass slides Methylene blue Pour Plate Method Principle:-The pour plate method is based on diluting the mixed culture with liquefied nutrient agar in such a manner that the colonies formed on the plate are countable. Generally,a loopful of bacteria is inoculated into tube I and dilute into tube II and tube III. This method has an advantage over the streak plate method as it does not require much skill, but it has disadvantage due to the reasons that amount of media and glassware are more. Requirements:Mixed bacterial cultures Nutrient agar Petri plates Hot plate Beaker of water Inoculation loop Glass marker. Procedure:1.Inoculate tube I with a loopful of bacterial and after thorough mixing and transfer a loopful of bacterial in tube II. Shake the tube vigorously between palms and transfer the loopful of culture from tube II to tube III. 2.Note that all the three tubes contain liquefied nutrient agar and are placed on a water beaker which are further kept on hot 34 plate. 3.Pour its content separately on the three plates. After solidifying the medium, incubate at 250C for 24 hrs in inverted position in an incubator. 4.Evaluate the plates for obtaining pure culture. Result:- 35 Experiment No 11. Aim:- Staining Techniques :Simple Staining, Gram Staining, Acid fast Staining, Endospore Staining and Viable Count. I.Simple Staining:Principle: This technique is recommended to study morphology and arrangement of bacterial cells. When a single dye is used, the process is referred to as ‘simple staining’ or ‘monochrome staining’ since only one staining solution is employed for colorization of bacterial smear. In this case, basic stains with positively charged chroma gen (dye) binds with negatively charged cell wall components (slightly acidic in nature). Carbol fuchsin, crystal violet and methylene blue are commonly employed for simple staining. Requirements: Inoculating loop Bunsen burner Staining tray Microscope Glass slide Methylene blue (0.5%) Crystal violet (1%) Carbol fuchsin (diluted 10 times before use) Procedure:1.Fix the smear on a slide by gentle warming over the flame of spirit lamp. 2.Flood the smear with a solution of a basic dye such as carbol fuchsin, crystal violet 2-60 seconds and methylene blue stains within 1-2 minutes. 3.Then gently rinse tap water and dry with blotting paper. 4.Examine the smear under oil immersion objective. Result:- 36 II.Gram Staining:Principle:-This is the most important differential technique used in bacteriology. There are two groups, Gram-positive and Gram-negative bacterial. The smear on the slide is prepared, stained with crystal violet and then treated with iodine solution as a mordant The crystal violet-iodine complex impart purple-black colour to the cells. In Grampositive cells this complex binds to the magnesium-ribonucleic acid component of the cell wall, forming complex which is difficult to remove. This serves as a lipid solvent and a dehydrating agent for protein. The Gram-positive bacteria contains low lipid content, hence the low amount of lipid is easily dissolved by alcohol. This makes minute pores in the cell wall that are closed by dehydration effect of alcohol. In Gram-negative cells, large pores are formed that do not close by dehydration of cell wall protein does not occur completely.This facilitates the release of the unbound crystal violet complex leaving the cell colourless or unstained. If the smear is counter stained with safranine, the Gram-negative cells are easily seen due to absorption of safranine and imparting the cells red colour; while Gram-positive cells retain the blue colour of the primary stain. Requirements:Bacterial slant culture Crystal violet Gram’s iodine Ethyl alcohol 37 Safranine Bunsen burner Inoculating needle Staining tray Glass slide Microscope Procedure:1.Prepare a bacterial smear and heat fixed on the slide using standard procedure. Pour a few drops of crystal violet on the smear. 2.Wait for 1 minute and wash with tap water.Now, flood the smear with Gram’s iodine for 1 minute and again wash with tap water. 3.Decolourise the stain with ethyl alcohol (95%) by dropping the reagent drop-wise until crystal violet fails to wash from the smear. 4.Wash it with tap water and counter stain with safranine for 45 seconds and wash again with water. 5.After drying, examine under oil immersion. Result:- III Acid Fast Staining:Principle:-Certain bacterial and actinomycetes have waxy components of the cell wall, hence their cell wall has limited permeability. Majority of bacterial are stained with simple satin and Gram stain but the members of the genus Mycobacterium can only be stained by acid-fast stain. Once the stain enters inside the cell, it cannot be readily removed even by acid alcohol decolorising agent. Acid-fast staining is widely used as differential staining procedure in bacteriology. However, some bacteria resist colourisation by both acid and alcohol, and hence are referred to as acid-fast organisms. Ziehl-Neelsen Staining method:- In Mycobacterium and some 38 species of Nocardia, the acid-fastness property is correlated with their high lipid contents.Hence for staining of these bacteria heating with strong dye is required. Once the bacteria are stained, it is difficult to decolourise them even with acid and alcohol.Non-acid-fast bacteria lose primary dye and take counter stain. Requirements:Tryticase soy broth for Mycobacterium culture Inoculating loop Bunsen burner Staining tray Microscope Glass slide Decolourising solvent Methylene blue Carbol fuchsin The reagents are prepared as given below: Carbol fuchsin stain: Basic fuchsin 0.3 gm Ethanol(95%) 10 ml Phenol (heat melted crystals) 5 ml The basic fuchsin dissolved in ethanol, and then in phenol in water. Mix them and keep for several days. Filter it before use. Decolourising Solvent: Ethanol (95%) Hydrochloric acid (conc.) Counter Stain: Methylene blue chloride Distilled water 97 ml 3 ml 0.3 gm 100 ml Procedure:1.Place the slide with an air-dried and heat-fixed smear on a hot plate until the steam rises with carbol fuchsin stained smear. Keep the preparation moist with stain and steaming for 5 min. Don’t boil it. 2.Wash the film with gentle stream of water until no colour appears from effluent. 3.Decolourise with HCL (3%) and immediately wash with tap water. Stain should appears faintly pink. 39 4.Now, counter stain with malachite green (1%) for 20-30 seconds and wash with water as before. Result:- IV Endospore Staining:Principle:-Endospores are the dormant structures formed in various bacteria under unfavourable conditions. Their size is irregular and highly refractile and heat-resistant. The differentiation between spore and vegetative cell is made possible. Most of the anaerobes and members of bacilli group of bacteria form spores under unfavourable conditions.When the favourable conditions begin, spore starts germination and gives rise a new vegetative cell. Procedure 1. Using aseptic technique, prepare a bacterial smear on a clean slide, air dry and gently heat fix. 2. Prepare a boiling water bath. 3. Cover the slide with a piece of paper towel, and place on a staining 40 rack over the water bath. 4. Flood the paper towel on the slide with Malachite green (primary stain). 5. Steam the slide for five minutes. 6. Remove the slide from the water bath, and remove the paper towel from the slide. 7. Allow the slide to cool, and then rinse with deionized water until the water runs clear. 8. Pour off any excess water and apply Safranin (counterstain) for two minutes. 9. Rinse excess Safranin off with deionized water, and blot the slide dry with paper. 10. Examine the slide with a light microscope under oil immersion. The vegetative cells are pink/red and the endospores are green. 41 Experiment No.12 Aim : Demonstration of presence of α - amylase in saliva. Principle :Starch is made up of maltose unit which is hydrolysed by enzyme amylase. Amylase is an extracellular hydrolytic enzyme it breaks the 1,4 glycosidic linkages in starch and convert it in to dextrin and finally in to maltose. α – amylase secreated by Aspergillus oryzae and amylase is secreted by Bacillus subtilis. The reduced products are determined by 3,5 dinitro salicylic acid (DNS). The concentration of reduced DNS form by the amount of starch hydrolyzed is directly proportional to enzyme activity .It turns solution from yellow to brick red color which can be determined by using colorimeter. Protocol:Reagent Phosphate Buffer (pH 6.7,0.1N) Starch solution NaCl, 1% 1 2.5 2 2.5 3 2.5 4 2.5 5 2.5 2.5 1.0 --1.0 ---1.0 2.5 1.0 2.5 1.0 Mix well and keep tubes for 10 min at 370c Water 1.0 1.0 0.5 0.5 Diluted saliva -----0.5 0.5 0.5 0.5 Prepare tubes in duplicate Immediately after the addition of saliva and diluting. Add 0.5ml 2N NaOH to tube 5 to stop the reaction. This is called the ‘Zero’ time control. The rest of the tubes are incubated at 370c for 15 minutes, at the end of which the reaction is stopped by the addition of 0.5 ml 2N NaOH. Now add 0.5ml of dinitrosalicylic acid reagent mix,well and heat the tubes in a boiling water bath for 5 minutes .cool the tubes to room temperature and measure their O.D at 520nm using tube 1 as blank. This does not contain any enzyme. Tube 2 is also a control since this does not contain the substrate or the enzyme source. Tube 3 contains the enzyme but not the substrate and any reading in tube is due to contamination from the enzyme source. This reading has to be subtracted from the value of readings for tubes 4 and 5 comparing tubes 4 and 5 ,it is seen that they contain complete mixture. Expect that the reaction in 5 has been stopped immediately on addition of enzyme .In other word it is the zero time control. So, that amount of maltose formed in 15 min by the amount of saliva added is : 42 (O.D. of tube 4 – O.D. of tube 3) – (O.D. of tube 5-O.D. of tube 3) From this std .graph of maltose, one can calculate the corresponding amount of maltose formed per ml of saliva. Result:- 43 Experiment No.13 Aim:-The Determination of Blood Glucose by Nelson Somogyi Method Reagents-Analytical reagent grade or the equivalent. 1. Copper Reagent A. Dissolve 25 gm. of Na2C03 (anhydrous), 25 gm. of Rochelle salt, 20 gm. of NaHCO3, and 200 gm. of Na2SO4 (anhydrous) in about 800 ml. of water and dilute to 1 liter. Filter if necessary. This solution should be stored where the temperature will not fall below 200. Sediment may form after a few days. This may be filtered off without detriment to the reagent. 2. Copper Reagent B. 15% CuSO4.5H2O containing one or two drops of concentrated sulfuric acid per 100 ml. 3. Arsenomolybdate color reagent. Dissolve 25 gm. of ammonium molybdate in 450 ml. of distilled water, add 21 ml. of concentrated H2SO4 mix, add 3 gm. of Na2HAsO4.7H20 dissolved in 25 ml. of H2O, mix, and place in an incubator at 37” for 24 to 48 hours. If a reagent is needed quickly, an alternative procedure is to heat to 55” for about 25 minutes. However, stirring must be adequate to prevent local overheating; otherwise decomposition of the chromogen may occur. This is accompanied by the precipitation of a bright yellow compound. The first procedure has been uniformly successful and is the recommended one; the second is inconvenient, and with certain preparations of sodium arsenate yields reagents which, though useful, are inferior in potential color development to those prepared by the first procedure. This reagent should be stored in a glass-stoppered brown bottle.2 4. 5 per cent ZnS04.6H2O. 5. Approximately 0.3 N Ba(OH)2. The zinc and barium solutions should be adjusted so that 5 ml. of zinc require between 4.7 and 4.8 ml. of barium to produce a definite pink to phenolphthalein. The zinc should be diluted to 20 or 25 ml. with H20 and the Ba(OH)2 added dropwise with constant mixing during the titration. Store in a bottle protected by soda lime from the carbon dioxide of the air. It is convenient to have 44 an arrangement for direct delivery of the Ba(OH) 2 into a 5 ml. burette graduated to 0.01 or 0.02 ml. Procedure The blood filtrates are prepared as follows:1.Add 1 volume of blood to 15 volumes of water, mix, add 2 volumes of Ba(OH)2, mix, and after the mixture has turned brown add 2 volumes of ZnSO4 and mix. After a few minutes the mixture may be filtered; somewhat more filtrate may be secured by a preliminary centrifugation. 2.For finger-tip blood, one may wash 0.1 ml. Of blood from a pipette calibrated “to contain” into 1.5 ml. of water contained in a small vial or test-tube. After 0.2 ml. each of Ba(OH)2 and ZnS04 is added. the mixture is centrifuged. The filtrate is then drawn into a 1 ml. pipette tipped with washed cotton. 3.1ml. of filtrate is pipetted into a narrow test-tube graduated at 25 ml. 4.1ml. of a mixture (prepared the day of use) of 25 parts of Reagent A to 1 part of Reagent B is added. Since this latter volume is not critical, a burette or measuring pipette may be used. 1 ml. portions of appropriate standards and 1 ml. of distilled water, to serve as a blank, are set up in the same way. The solutions are mixed and heated for 20 minutes in a boiling water bath. At the end of 20 minutes the tubes are cooled in a pan of cold water. 1 ml. of the arsenomolybdate reagent is then added to each; a measuring pipette is convenient and adequate for this measurement. The color develops very rapidly and will be completed by the time thorough mixing and evolution of CO2 are completed. The mixture is then diluted to the mark, mixed, and read in a photoelectric calorimeter at 500 or 520 mµ. The photometer is adjusted so as to read 100 per cent transmission through the blank. The color is very stable and may therefore be read at convenience. The stability of the color is absolute and not relative; the density of the blanks as well as of the more deeply colored solutions remains unchanged with time. {The deproteinieation procedure given is one suggested to us by Dr. Somogyi several years ago. It has been well known (Benedict Somogyi that the ZnSO4-NaOH deproteinization procedure leaves a small amount of Zn remaining in the filtrate and that this trace apparently accelerates the reoxidation of cuprous oxide. The extent of this is small and relatively unimportant in a macro blood sugar estimation, but decidedly significant in a microdetermination. We had encountered this difficulty and devised a procedure similar to but more 45 cumbersome than the one Somogyi was using to overcome the same difficulty. We have found his method a very useful technique for various purposes, since it has the advantage of yielding a filtrate practically free of the deproteinizing reagents. (The high Na2S04 concentration of the reagent gives adequate protection against reoxidation for most purposes; so that neither the constricted Folin-Wu tube norcovered tubes are essential.)} 46 Experiment No.:14 Aim:- RBC Count Introduction The red blood cell count (RBC cont) is important in diagnostic hematology. It permits the MCV and MCH values to be calculated. The manual method of RBC count is time consuming and imprecise. The reference methods preferred for RBC count is an automated method Normal valuesMale : 4.5to6.0 x106 cell/ cu mm (u1). Female : 4.0 to4.5 x 106 cell/ cu mm (u1). 47 A hemocytometer. The two semi-reflective rectangles are the counting chambers. Principle:The blood specimen is diluted 1.200 with the RBC diluting fluid and cells are counted under high power (40 x Objective) by usine a counting chmber. The number of cells in undiluted blood are calculated and reported as the number of red cells per cu mm (ul) of whole blood . Specimens 1.Double oxalated or EDTA blood or 2.Capillary blood (The specimen need not be a fastine sample) Requirements 1. Microscope 2. Improved Neubauer Chamber 3. RBC pipette 4. RBC diluting fluid It is prepared as follows a) Sodium citrated : 3.0g b) Formalin :1.0ml c) Distilled water to : 100ml This solutions is stables at room temperature (250C ± 50C) for at least one year. Procedure 1. Mix the anticoagulated blood care fully by swirling the bulb. 2. In the case of capillary blood the lancet stab should be Sufficiently deep to allow free flow of blood. It is drawn quickly in the RBC pipette. 3. Draw blood up to 0.5 mark.The pipette by using cotton or a gauze.Draw diluting fluid up to 101mark 4. The pipette in rotated rapidly by keeping it horizontal during mixing. 5. After five minted, by discarding few drops from the pipette and holding it slightly inclined small volume of the fluid is introduced under the cover slip which is placed on the counting chamber. 6. Allow the cells to settle for 2to 3 minutes. 7. Place the counting chamber on the stage of the microscope. 8. Switch to low power (10x) objective. Adjust light and located the large square in the center with 25 small squares. 48 9. Now switch to high power (40x) objective. 10. The red blood cells in the four corner squares and in the center squar (marked in the diagram as ‘R’) are counted. 11. Use following formulae for the calculation of red blood cells. Total red blood cells per liter of blood =RBCs/ cumm (u1) x106 Or use following formulaRed cell count (per liter) =No. of cell counted Volume counted (u1) x Dilution x 106 Total red blood cells counted x Dilution Area counted x Depth of fluid Where (1) dilution = 1.200 (i.e,200) (2) Area counted = 80 400 ═ 1 Sq. mm. 5 Result 49 Experiment No 15 Aim: WBC Count. Principle:- The glacial acetic acid lyses the red cells while the gentian violet slightly stain the nuclei of the leukocyte. The blood specimen is diluted 1:20 in WBC pipette with the diluting fluid and the cells are counted under low power of microscope by using a counting chamber. The no. of cells in undiluted blood are reported per cu mm(ul) of whole blood. Clinical Significance: Increase in total leukocyte count of more than 10000/cu mm(ul) is known as leukocytosis and decrease of less than 4000/cu mm(ul) as leucopenia. Normal Values: Adults At birth 1-3 yrs 4-7 yrs 8-12 yrs 4000-10000/cu mm(ul) 10000-25000/cu mm(ul) 6000-18000/cu mm(ul) 6000-15000/cu mm(ul) 4500-13500/cu mm(ul) Specimen: Double oxalated EDTA Blood Capillary Blood (Specimen need not be a fasting sample) Requirements: Microscope Improved Neubaur’s chamber WBC Pipette WBC Diluting Fluid; it is prepared as follows: a) Glacial acetic acid 2ml b) 1% w/v Gentain violet 1ml c) Distilled water 97ml This solution is stable at room temperature. Thymol may added as preservative. Procedure 1. Draw blood upto 0.5 mark of a WBC pipette. 2. Carefully wipe excess blood by using cotton. 3. Draw diluting fliud upto 11 mark. 4. Mix the content in a pipette and after 5 min by discarding few 50 drops,fill the counter chamber and allow the cells to settle for 23 mins. 5.Focus on W-marked areas (each having 16 small squares) by turning objectives to low power(10X). 6.Count the cells in all 4 W-marked chambers. Calculations: No.of White cells/cu mm(ul) of whole blood =No. of white cells counted X dilution Area counted X depth of fluid Where, Dilution=20 Area counted=4X1 sq mm=4sq mm Depth of fluid = 0.1mm (constant) Therefore,Whole blood=No. of cells counted X 20 4X 0.1 =No of cell counted X 50 Result 51 Experiment No.16 Aim: Measurement of blood pressure by spygmonameter. Principle: when an external pressure is appliaed over the artery, the blood flow through it is obstructed.and the pressure required to cause occlusion of blood flow indicates the pressure inside the vessel. Requirements: Apparatus : Sphygmonometer Stethoscope Procedure : 1.Brachial artery is usually chosen because of convinence. 2.The arm cuff is tied around upper arm above the cubital fossa. 3.The cuff should not be to tight or loose. The cuff is attached to Sphygmonometer . 4.First the radial pulse is felt. While feeling the pulse, the pressure is increased in the cuff by inflating air in to it,with the help of a hand pump. 5.While doing this, the mercury column in the Sphygmonometer shows the pressure of the cuff. 6.When the radial pulse disappears, the pressure is further increased by about 20nm Hg. 7.Then ,the pressure in the cuff is slowly reduced by releasing the valve of the hand pump. This is done by feeling the pulse and simultaneously watching the mercury column. 8.Pressure is noted when the pulse reappears, this indicates the systolic pressure. 9.After determine the systolic pressure , the pressure in the cuff is raised by about 120 mm Hg. Above that level so that, the brachial artery is occluded due to compression. Now the stethoscope is placed over the cubita fossa, the pressure of the cuff is released . 10.While doing so the series of sound are heard in four phases through the stethoscope . 11.First phase:-While decreasing the pressure from the arm cuff, the occlusion of the artery is relived and when the blood flows through the artery the first sound appears suddenly it indicates the systolic pressure. it slowly becomes loader when the pressure is reduced. 12.Second phase:- After the taping sound a murmuring sound is heard when the pressure id further by about 15 mm Hg. 52 13.Third phase:- After murmuring sound ,a very clear and loader sound is heard. This is of gong type. it is heard while reducing pressure by another 15mm Hg. 14.Fourth phase:- After the gong type sound ,a mild and muffled sound is heard till the pressure falls further by 5mm Hg It disappears afterwards .this disappearance of sound indicates diastolic pressure. Result: 53 Experiment No: 17 Aim- Protein estimation by Lowry’s method. Principle-The principle of this method is based on the facts that the Folin-Ciocalteu regents reacts with aromatic residues of proteins and yields blue color which in turn is read in colorimeter. The different proteins contain different aromatic residues. Blue color develops because the alkaline copper reacts with proteins; tyrosin and tryptophan present in protein reduce phosphomolybdate.(present in Folin-Ciocalteu reagent) Requirements1. 1N NaOH Solution. 2. ALKALINE SODIUM CARBONATE Solution-Dissolve 20gm of Na2 CO3 in 100 ml of 0.1N NaoH solution, prepare fresh. 3.Copper Sulphate-Sodium Potassium Tartarate SolutionDissolve 0.5g/lt of CuSo4.5H2o in 1% OF sod-pot. tartrate solution, prepare fresh. 4.Alkaline Copper Reagent- Mix 50ml of reagent 2 and 1ml of reagent 3 only on the day of use. 5.Folin-Ciocalteau Reagent-It is a solution of Sodium tungstate and Sodium molybdate in phosphoric and hydrochloric acids (available commercially).Dilute the commercial reagent with an equal volume of distilled water only on the day of use. Procedure:a) Transfer1N NaoH solution in a test tube and heat up to 100oC. b) Suspend 1 ml of protein sample into the above solution for 4-5 minutes. c) Add 5ml of reagent 4, mix properly and leave this mixture at room temperature for 10 minutes. d) Add 0.5 ml of Folin-Ciocaltue reagent rapidly with immediate mixing. e) Leave it for 30 minutes; thereafter measure the absorbance of solution at750 nm in the colorimeter. 54 Protocol:- Sr No Stock of Distille Concentration protein d water of protein (ml) (ml) Alkaline Fcr Reagent (ml) 1 0.0 1.0 0 5ml 0.5 2 0.1 0.9 0.02 5ml 0.5 3 0.2 0.8 0.04 5ml 0.5 4 0.3 0.7 0.06 5ml 0.5 5 0.4 0.6 0.08 5ml 0.5 6 0.5 0.5 0.1 5ml 0.5 7 0.6 0.4 0.12 5ml 0.5 8 0.7 0.3 0.14 5ml 0.5 9 0.8 0.2 0.16 5ml 0.5 10 0.9 0.1 0.18 5ml 0.5 11 10 0.0 0.2 5ml 0.5 12 Unknown1 - - 5ml 0.5 13 Unknown2 - - 5ml 0.5 O.D Result- Concentration of protein in unknown sample was found to be – Unknown 1 – mg/ml Unknown 2 – mg/ml 55 Experiment No:-18 Aim:- To determine acid value of fats. Principle:-During storage, fats may become rancid as a result of peroxide formation at the double bonds by atmospheric oxygen and hydrolysis by micro-organisms with the liberation of free acid.The amount of free acid present therefore gives an indication of the age and quantity of the fat. It is suggested that each pair of students choose one lipid and assay(a) of fresh sample and (b) one that has been exposed to atmosphere.Results should then be compared with other groups who have determined other lipids. The acid value is the number of milligrams of KOH required to neutralize the free fatty acid present in 1gm of fat. Materials:1. Olive oil, butter and margarine (use a fresh sample and one that has stood for several days at room temperature)- 200gms. 2. Fat solvent (equal volumes of 95% v/v alcohol and ether neutralized to phenolphthalein)- 6 litres. 3. Phenolphthalein (10gm/litre in alcohol)- 200ml. 4. Potassium hydroxide (0.1 mol/litre)-1 litre. 5. Burettes (5ml and 25ml)-50. Method:1.Accurately weigh out 10 gm of the test compound and suspend the melted fat in about 50ml of fat solvent. 2. Add 1ml of phenolphthalein solution, mix thoroughly, and titrate with 0.1 mol/litre KOH until the faint pink colour persists for 20-30s. 3. Note the number of milliltres of standard alkali required and acid value of the fat. (Note: 0.1 mol/litre KOH contains 5.6gm/litre). Result:- 56 Experiment No. 19 Aim: Determination of Blood clotting time. Principle : Blood is collected in a capillary tube after a finger prick and the stop watch is started. The formation of fibrin string is noted by breaking the capillary tube at regular intervals. The time is noted at the first appearance of the fibrin string. Requirement: Sterile lancet capillary tubes (1.5 mm diameter and 10 to 15 cm length) cotton. 70% alcohol Stop watch Procedure 1. By using a piece of cotton, apply 70% alcohol to the patient’s fingertip. 2. Make a deep (1mm) incision with a sterile lancet and start the stopwatch. 3. Wipe off the first blood drop and collect blood in the Capillary up to 2/3 of its length. 4. After every half minute. break off about 1 cm of the capillary to find out whether fibrin string has formed. 5. When the fibrin string appears, stop the stop watch and note down the time. Result : 57 Experiment No. 20 Aim:- Assay of hemoglobin by hemoglobinometer. Principle: - When blood is added to 0.1N HCL, hemoglobin is converted to brown colour acid hemation. The resulting colour after dilution is compared with standard brown glass reference blocks of a Sahli hemoglobinometer. Clinical Significance:- A decrease in below normal range is indication of anemia. Normal Values: Hb, gm/dl Male 13-18 Women 12-16.5 Children(upto 1yr) 11-13 Children(10-12yr) 11.5-14.5 Infant 13.5-19.5 Specimen:- Capillary blood or thoroughly mixed ant coagulated(EDTA or double oxylated) venous blood. The specimen need not be a fasting sample. Requirement:-Sahli’s hemoglobinometer;it consist of a) A std brown glass mounted on a comparator. b) A graduated tube. c) Hb pipette 0.02ml. -0.1N HCL -Distilled Water -Pasteur pipette. Procedure:1. By using Pasteur Pipette :- Add 0.1 N HCL in the tube upto the lowest mark (20% mark). 2. Draw blood upto 20ul mark in the Hb pipette.Adjust the blood coloum,carefully without bubble. 58 Result: 59 Experiment No. 21 Aim: Differential Leukocyte count Principle:-Differential count is useful to identify changes in the distribution of white cells which may be related to specific types of disorders. It also gives idea regarding the severity of the disease and the degree of response of the body. Normal values Neutrophilia: 40-75% (mean: 57%) a) Segmented 2-6% (mean: 3%) b) Band forms 50-70% (mean: 54%) Eosinophils 1-4% (mean: 2%) Basophils 0-1% Lymphocytes 20-45% (mean: 37%) Monocytes 2-8% (mean: 6%) The polychromic staining solutions (Wright, Leishman, Giemsa) contain methylene blue and eosin. These basic and acidic dyes induce multiple colours when applied to cells. Methanol acts as fixative and also as a solvent. The fixative does not allow any further change in the cells and makes them adhere to the glass slide. The basic component of white cells is stained by acidic dye and they are described as eosinophilic or acidophilic. The acidic components (Eg nucleus in nucleic acid) take blue to purple shades by the basic dye and they are called basophilic. The neutral components of the cell are stained by both the dyes. Requirements:Microscope Slides Glass spreader Immersion oil Reagents: Wright’s Stain:1. Weigh 0.2 gm of powder. 2. Transfer part of it in a clean dry mortar. 3. Add acetone-free methanol (above25ml). 4. Grind the powder by using a pistle. 5. Transfer the ground staining solution to the clean and dry amber colored bottle by filtering through a filter paper. 6. Repeat the procedure till all the powder and total 100ml of methanol is used up. 60 7. Stored in an amber colored bottle at room temperature. 8. The stain improves on standing for about a week. Buffer: pH 7. 1. Sodium dihydrogen phosphate (NaH2PO4.2H2O) 3.76gm 2. Potassium dihydrogen phosphate (KH2PO4) 2.10gm 3. Distilled water 1000ml Keep at room temperature. Procedure: 1. A thin smear is prepared by spreading a small drop of blood evenly on a slide. Making the film: -Take a clean, dry (grease free slide). -Transfer a small drop of blood near the edge of the slide. -Place the spreader slide at an angle of 300. -Pull back the spreader until it touches the drop of blood. Let the blood run along the edge of the spreader. -Push the spreader forward to the end of the slide with a smooth movement. -Dry the blood smear at the room temperature. Adequate drying is essential to preserve the quality of the film. Result: 61 Experiment No:-22 Aim:- Estimation of Protein by Biuret Method. Principle: The proteins are made up of amino acids containing peptide bonds. Two or more peptide bonds react with copper sulphate and result in violet colored product. The Cu atoms form complex with four of nitrogen atoms of peptide chain and develop the color. The number of peptide bonds present in a sample governs the color intensity of the sample. Materials:1. Protein Standard (5mg albumin/ml).Prepare fresh. 2. Biuret reagent.(Dissolve 3gm of copper sulphate (CuSo4 5H2O) and 9 gm of sodium potassium tartar ate in 500ml of 0.2 mol/litre sodium hydroxide; add 5gm of potassium iodide and make up to 1 litre with0.2 mol/litre sodium hydroxide). 3. Water bath at 370C. Method:1. 2. 3. 4. Protocol:Regent 1 Std. protein solution Distilled Water Biuret solution Add 3ml of Biuret reagent . Add 2 ml of protein solution. Mix them and warm at 370C for 10 mins. Cool and read at 540 nm. 2 3 4 5 6 7 8 9 10 Blank Unknown 0. 1 0. 2 0. 3 0. 4 0. 5 0. 6 0. 7 0. 8 0. 9 1 ------ ------ 3. 9 6 3. 8 6 3. 7 6 3. 6 6 3. 5 6 3. 4 6 3. 3 6 3. 2 6 3. 1 6 4 4 ------ 6 6 6 Keep all tubes at 370C for 10 min read O.D at 540 nm. Calculation:Conc. Of unknown = O.D. of unknown O.D. of Std χ Conc. of std. Result:62 Experiment No. 23 Aim:- Detection of bacterial motility by hanging drop method. Principle: This technique is meant for microscopic observation of living bacteria. Due to their small size and close refractive index to that of water,do not allow them to observe readily under unstained condition. The motility and binary fission may seen using this technique. Requirements: 1. Bacterial culture 2. Microscope 3. Cavity slide 4 .Cover slip 5. Vaseline or petroleum jelly 6. Inoculating needle 7. Bunsen burner Procedure: I. II. III. Place a loopful or 1 drop of sample in the center of a cover slip. Invert it over the well of a cavity slide in such a way that the drop does not move or contact the side wall of the well. Apply Vaseline or petroleum jelly at four corners of cover slip (to seal the edges). Observation Observe the slide under microscope. First focus it under low power of objective and then under 45x . Result: 63 Experiment No.24 Aim: Oligodynamic activity test of metals. Principle: The oligodynamic acton (oligo = Small, dynamic = power) is effect of small amount of heavy metals on bacteria .This effect is due to high affinity of heavy metals with the cellular proteins of the bacteria. The bacterial cells die due to cumulative effects of metal ions within the cell. The oligodynamic action of different metals on bacteria can be compared. Requirements: 1.Nutrient agar tube 2.Culture of E.coli or S.aureus 3.Perti dishes 4.Copper or aluminum coins 5.Incubator Procedure: 1. Prepare culture tube of nutrient agar or liquefy nutrient agar in a tube. 2. Cool to 500C and inoculate with E. coli or S. aureus. 3. Pour half of the medium into a sterile petri plate and leave the other half on water bath. 4. Leave the plates to solidify. 5. Meanwhile take copper and aluminum coins,clean them with detergent and water. As soon as they are cleaned place them on the surface of agar. 6. Pour the remaining medium seeded with bacteria over the metal coins and incubate the plate at 370C for 48 hours. 7. Bacterial growth occurs. The clearing zone may be visible around the coins. 8. Measure the diameter of clearing zone may be visible around the coins. 9. Measure the diameter of clearing zone or zone of inhibition and compare the effect of both the metallic coins on growth of the bacteria. Observations: The clearing zone surrounding the coin indicates no growth, Narrow zone showing heavy bacterial growth called stimulatory growth as low amount of heavy metal coins induced bacterial growth. Rest of the area contains normal growth. Such phenomenon confirms oligodynamic action. 64 Result: 65