AP Biology Transformation Lab Results Name_____________________________ Date ______________________ Per ___ 1. Label the following on E. coli cell below: Ribosomes, Plasma membrane, Plasmids, Chromosomal DNA Observe the results on the plates under normal lighting conditions. Then observe using a UV light. Draw your results from the plates on the corresponding spaces below. I LB (-) LB =_________________ II LB/Amp (-) III IV LB/Amp (+) LB/Amp/Ara (+) Amp = _________________ Ara =_________________ (+) =_________________ (-) =_________________ 2. Which plate(s) should have exhibited bacterial growth? ________________________ Explain: __________________________________________________________________________ ____________________________________________________________________________________ ____________________________________________________________________________________ 3. Which plate shouldn’t have contained any bacterial growth? ____________________ Explain: __________________________________________________________________________ ___________________________________________________________________________________ 4. If the genetically transformed cells have acquired the ability to live in the presence of the antibiotic ampicillin, then what might be inferred about the other genes on the plasmid used in the experiment? ___________________________________________________________________________________ ___________________________________________________________________________________ 5. Which plate shows bioluminescence when exposed to UV-light? ________________ 6. Explain why the plasmid does not fluoresce, but the E. coli does _____________________________ ___________________________________________________________________________________ 1 GM/2009 7. Which plates are meant to be control plates? ________________________________ Explain your answers. _________________________________________________________________ ____________________________________________________________________________________ ____________________________________________________________________________________ 8. The insertion site of the DNA molecule is called _____________________________ 9. Enzymes that cut DNA at specific sites are called. ____________________________ 10. The attraction in “Sticky Ends” are caused by _______________________________ 11. Enzymes that catalyze phosphodiester bonds between two DNA fragments are called ____________ Explain the purpose of each step in #12-14: 8. The addition of transformation solution (CaCl2) the suspension 9. The addition of LB Broth to the suspension 10. “Heat shocking” the E coli. Read: Appendix D - Gene Regulation online to help answer #15-18. 15. Describe the arabinose operon. 16. Sketch the Arabinose Operon. 17. Explain the role of arabinose in gene regulation. 18. Explain why the GFP gene is only expressed on the plate with arabinose. 2 GM/2009 Transformation Efficiency Count the total # of cells growing on the LB/Amp/Ara plate: To determine the amt of DNA (pGLO) in the bacterial suspension spread on the LB/Amp/Ara plate follow the steps below. 1. Calculate the total amt of DNA (µg) used in the experiment Amt of DNA used = (concentration of DNA µg/µl) x (volume of DNA µl) (You used 10 µl of pGLO at 0.03 µg/µl concentration, meaning each microliter of solution contained 0.03 µg of pGLO DNA) Amt of DNA used = ( µg/µl) x ( µl) = ____µg DNA 2. From the lab directions determine the fraction of DNA in the bacterial suspension spread on LB/AMP/ARA plate: Fraction of DNA used in exp = Volume spread on LB/Amp/Ara plate Total sample volume in test tube Fraction of DNA spread: __ µl = µl 3. Multiply the total amt of DNA used x the fraction of DNA spread = DNA (pGLO) in the bacterial suspension spread on the LB/AMP/ARA _____ µg DNA x _____ = _____ µg DNA in spread __ Transformation efficiency: Total # of cells growing on the LB/Amp/Ara plate Amt of DNA in the E. coli suspension spread on the plate Transformation efficiency: __________ = transformants/ µg Convert the answer above into scientific notation transformants/ µg 3 GM/2009 Transformation Efficiency Sample Problems. Problem 1 Calculate the transformation efficiency using the following experimental results. DNA Plasmid concentration: 0.03 µg/µl 250 µl transformation solution (CaCl2) 10 µl of plasmid solution 250 µl LB broth 100 µl cell suspension spread on the plate 227 colonies counted transformants/ µg Transformation efficiency: __________ = transformants/ µg Convert the answer above into scientific notation Problem 2 Using the same concentration of DNA, and fraction of cells spread on the plate, plus a transformation efficiency of 3 x 103 bacteria/ µg of DNA, calculate the number of transformants that would be expected to grow on the LB/Amp/Ara plate. Total cells = 4 GM/2009