KunLiang Guan, Ph.D. CURRICULUM VITAE PERSONAL DATA Kun-Liang Guan Sanford Consortium for Regenerative Medicine, RM 4010, 2880 Torrey Pines Scenic Dr., La Jolla, CA 92037-0695. Tel: 858-822-7945, e-mail: kuguan@ucsd.edu EDUCATION: 1978-1982 Undergraduate student in the Department of Biology. Hangzhou University, China, B.S. 1982-1983 CUSBEA student, Graduate student in Shanghai Institute of Plant Physiology, Shanghai, China 1983-1989 Graduate student in the Department of Biochemistry, Purdue University, West Lafayette, Indiana, Ph.D. (Dec.17, 89) (Biochemistry, Mentor: Henry Weiner) 1989-1991 Post doctoral fellow in the Department of Biochemistry, Purdue University (Mentor, Jack Dixon) ACADEMIC APPOINTMENTS 1992-1996 Assistant Professor, Department of Biological Chemistry, University of Michigan 1996-2000 Associate professor, Department of Biological Chemistry, University of Michigan 2000-2007 Professor, Department of Biological Chemistry, University of Michigan 2002 Visiting professor, Department of Chemistry and Biochemistry, University of Colorado at Boulder 2003-2007 Research professor, Life Sciences Institute, University of Michigan 2003-2007 Halvor N. Christensen Collegiate Professor in Life Sciences, University of Michigan 2005Adjunct professor, Fudan University, China 2007Adjunct professor, Department of Biological Chemistry, University of Michigan 2009Adjunct professor, Life Sciences Institute, Zhejiang University, China 2007Professor, Department of Pharmacology, Member, Moores Cancer Center, University of California, San Diego PATENT DNA encoding an 18 kD cdk6 inhibitor protein, Ser. No. 08/482,069 Diagnosis and treatment of diseases arising from defects in the tuberous sclerosis pathway, US patent 7169594 (issued January 30, 2007); Foreign patent references WO93/19752 SCIENTIFIC ACTIVITY Panel member of the NSF cell biology study section, 1995-1999 Editorial board member, Journal of Biological Chemistry, 1997-2002 Editorial board member, Biological Signals and Receptors. 1999-2002 Editorial board member, Experimental & Mol. Medicine, 2005-2013 1 KunLiang Guan, Ph.D. Editorial board member, JMCB, 2009Editorial board member, Cell Research, 2009NIH Study Section, Molecular Biology (Ad Hoc), 1998 NIH Study Section, CDF-3, 1999-2003 Reviewer member, National Natural Science Foundation, China, 2003-2006 Ad Hoc Reviewer for NCI Laboratory of Immunobiology, Oct.1-3, 2003; LIRR study section, Oct. 18, 2005 Ad Hoc Reviewer for DOD, Oct 15, 2003; April, 2005 HHMI International investigator reviewer, 2011 Consultant. College for Life Sciences, Nazarbayev University, Kazakhstan, 2012Session Chair or Organizer for FASEB Summer Conference, Gordon Research Conference, Cold Spring Harbor Phosphorylation Meeting, Ray Wu Society meeting, Salk Institute Protein Phosphorylation Meeting, ASBMB Annual meetings, Keystone Symposium GRANT SUPPORT Past University of Michigan Geriatrics Center - Regulation of Protein Tyrosine Phosphatases in Yeast, $25,000, [7/1/92 - 6/30/93], K. Guan, P.I. American Cancer Society - Regulation of Protein Tyrosine Phosphorylation, 7/1/936/30/96, $100,000 for last years, [7/1/93-6/30/96], K. Guan, P.I. University of Michigan G.I. Peptide Center - Regulation of Protein Phosphorylation/Dephosphorylation in Growth Hormone Response, 9/1/93-8/31/95, $60,000, [9/1/93-8/31/96], K. Guan, co-P.I. University of Michigan Geriatrics Center - Activation of the Protein Kinase Cascade in Mitogenic Growth Hormone Response. $25,000, [7/1/93-6/30/94], K. Guan, P.I. Park-Davis/Warner Lambert - The Regulation of Mitogen Activated Protein Kinases in Cellular Growth and Differentiation. $60,000, K. Guan, Co-P.I. Taisho Excellency in Research Program, $71,000 (direct cost for the last year), 19972000, P.I. GM51586-National Institute of Health-Protein Phosphorylation and Growth Factor Function, $165,000 (direct cost for the last year,1994-1998), P.I. National Institute of Health-Protein kinase in T-cell activation, $31,200 (for the last year, 1997-1998), P.I. Parke-Davis/Warner Lambert-Function of the KSR kinase in signal transduction, $90,000, Co-P.I. GM89570-National Institute of Health-Regulation of protein tyrosine phosphorylation, $123,974 (annual), 1995-1999, P.I. RPG-98-352-American Cancer Society, The functions of Smads in TGFb signal transduction, $80,000 (direct cost annually), P.I. GM51586-National Institute of Health-Protein Phosphorylation and Growth Factor Function, $193,000 (direct cost for the last year), 1998-2003, P.I. GM62694-National Institute of Health-Signal transduction of the Ras family small GTPases, $190,000 (direct cost for current year), 2000-2004, P.I. 2 KunLiang Guan, Ph.D. Regulation of the Raf kinase, Walther Cancer Institute, $95,000 (direct cost for current year), 2000-2004, P.I. R41CA101611-NIH-S6K and mTOR as targets for tuberous sclerosis. $155,222, 20032004, P.I. Dec. 2002-Nov. 2005 NIH-Regulation and function of tuberous sclerosis complex TSC1/TSC2 gene products in kidney diseases, (pilot grant for the nephrology center program grant), $60,000 (direct cost for the current year for Guan), co-PI (PI, Wiggins). Dec. 2004-Dec. 2005 F011886-Department of Defense-Regulation of TSC1/TSC2 stability and Rheb GTP level by Herc1. $100,000, P.I. Dec. 2005-Dec. 2006 F011886- -Department of Defense-BIG1 as a potential guanine nucleotide exchange factor for Rheb. $100,000 (total cost), P.I. Apr. 2003-May 2007 GM51586-National Institute of Health-Protein Phosphorylation and Growth Factor Function, $235,000 (Annual direct cost). June 2007-May 2008 W81XWH-07-1-0179, USAMRMC, DOD. Title: Regulation of the mTOR pathway by a novel Rheb binding protein BNIP3, $100,000, P.I. R01GM62694-08 (PI: Guan), 07/04-06/08, $203,860, Rheb Small GTPase signaling in tuberous sclerosis R01CA108941-04 (PI: Guan), 09/04-06/08, $198,644, TSC2 tumor suppressor protein in cellular energy response. R01CA113793-02 (PI: You) 02/08/06-1/31/11, $218,035 ($90,000 to Guan), Chemoprevention with mTOR and farnesyltransferase inhibitors, mTOR signaling: A novel mechanism of WNTS’s anabolic effects on bone R01GM62694-10 (PI: Guan) 07/08-06/12 1.44 calendar months NIH/GM $190,000 Title: Regulation of Ras and Rheb modification by GCN2 W81XWH-09-1-0279, (PI, Guan) Department of Defense Title: Regulation of mTOR by nutrients 6/09-5/12 $150,000 .96 calendar months CURRENT R01CA108941-05 (PI: Guan) NIH/ NCI 12/08-11/13 1.92 calendar months $178,780 $ 229,650 ARRA Supplement Title: TSC2 tumor suppressor protein in cellular energy response. The main object of this project is to investigate the function of TSC2 tumor suppressor in cellular energy starvation response, particularly how energy limitation regulating translation and metabolism. R01GM51586-15 (PI: Guan) 04/11-03/15 NIH/GM $238,500 Title: Protein phosphorylation and growth factor function. 3 1.44 calendar months KunLiang Guan, Ph.D. The objectives of this project are to study the biochemical mechanism of protein phosphorylation in regulation of cell growth in response to mitogenic growth factor stimulation. R01CA132809-01 (PI: Guan) 03/08-02/13 1.92 calendar months NIH/NCI $ 207,500 Title: Regulation and function of the YAP transcription co-activator oncoprotein The long term goals of this project are to determine the function and regulation of the Hippo pathway in development of human cancers. RB2-01547 (PI: Guan) 8/1/10-7/31/13 2.40 CIRM $278,220 Title: The Function of YAP in embryonic stem cells. The major goal of this project is to investigate the function of YAP transcription co-activator in human embryonic stem, induction inducible pluripotent stem cells. R01 DE015964-04 (PI: Wang) 4/1//10-3/31/15 .60 calendar months NIH/NIDCR $250,000 ($100,000 to Guan) Title: Molecular and Genetic Determinants of invasion in HNSCC The main goals of this project are to investigate the mechanism of tumor invasion of head and neck squamous cell carcinoma. Dr. C. Wang is the PI of this grant. R01 EY022611 (PI: Guan) 09/01/12-08/31/16 2.40 NIH/NEI $250,000 Title: Regulation of the Hippo pathway and its role in uveal melanoma The main goal of this project is to determine the mechanism of YAP regulation by G-proteins and elucidate the function of YAP activation in uveal melanoma, particularly those with activating mutations in Gq and G11. HONORS AND AWARDS 1984 Membership of The Honor Society of Agriculture, Gamma Sigma Delta 1989 The Arnold Kent Balls Award, Department of Biochemistry, Purdue University 1998-2003 MacArthur Fellow, The John D. Catherine T. MacArthur Foundation 1999 Schering-Plough Award (Young Investigator Award), American Society of Biochemistry and Molecular Biology 1999 Yong Investigator Award, Society of Chinese Bioscientist Association April 1999 Procter & Gamble Lecture, Purdue University April 2004 Susan Swerling Lecture, Dana-Farber Cancer Institute, Harvard Medical School 2004 Faculty Recognition Award, University of Michigan 2006 Distinguished Alumni Award, Purdue University Agriculture School 2011 AAAS fellow 4 KunLiang Guan, Ph.D. 2011 2011 2012 Ray Wu Award, CBI Society Zhu Kezhen Distinguished Alumni Lecture, Zhejiang University, China Keynote Lecture, Gordon Research Conference, Phosphorylation and Gprotein signaling network MEMBERSHIP AND OFFICES IN PROFESSIONAL SOCIETIES Ray Wu Society American Society of Biochemistry and Molecular Biology TEACHING ACTIVITY 1993-2007 Biochemistry 576, Signal transduction, Course co-director 1995-2001 Biochemistry 585, Cell cycle, Course director 2002-2005 Biochemistry 591, Special topics in Signal Transduction, Course co-director 2003-2007 Biochemistry 597, Critical analysis 2007Biomed 200 (guest lectures) 2008-2010 Biochemistry (for medical students) 2011 BMS 275 (co-director with Jing Yang) Current trainee Postdoctoral fellow Youngchul Kim Haixin Yan Ryan Russell Jenna Jewell Faxing Yu Joungsoon Mo Henry Park Carsten Hansen Toshiro Moroishi Graduate Students: Karen Tumaneng Guangbo Liu Steven Plouffe Past trainee Chaofeng Zheng, Research Fellow (1992-1994), President, Biomyx Steve Dudas, Research Fellow (1993-1995), Scientist, Henry Ford Hospital Elizabeth Butch, Research Fellow (1993-1998), Associate Professor, Eastern Michigan University Toshiro Sugimoto, Research Fellow (1995-1997), Lecturer, Shiga University, Japan Lijyun Syu, Research Fellow (1994-1996), Scientist, University of Michigan 5 KunLiang Guan, Ph.D. Tomas Lanigan, Research Fellow (1999-2002), Director, Vector Core, University of Michigan Bao-Hong Zhang, Research Fellow (2000-2002), Scientist, Metabasis Yong Li, Postdoctoral fellow (2001-2006), Research investigator, University of Michigan Eunjung Kim, Postdoctoral fellow (2004-2007), Assistant professor, Catholic University of Daegu, Korea Ken Inoki, Postdoctoral fellow (2002-2004), Assistant professor, University of Michigan Hongjiao Ouyang, Postdoctoral fellow (2004-2007), Assistant professor, University of Pittsburgh Weiquan Li, Postdoctoral fellow (1999-2006) Research investigator, University of Michigan Hiroyuki Mori, Postdoctoral fellow (2005-2007), Postdoctoral fellow, University of Michigan Xiaoming Zhou, Postdoctoral fellow (2005-2007), Research investigator, University of Michigan Tsuneo Ikenoue, Postdoctoral fellow (2004-2007), Assistant professor, University of Tokyo Young Kang, Research associate (2007-2008), Assistant professor, Scripps Research Institute Noelia Valbuena, Postdoctoral fellow (2008-2009), Salamaca University, Spain Wei Wang Postdoctoral fellow (2008-2010), Postdoctoral fellow, Burnham Institute Amy Lin, Postdoctoral fellow (2008-2010) Hideki Okazawa, Postdoctoral fellow (2009-2011), Assistant professor, Kobe University, Japan Joungmok Kim, Postdoctoral fellow (2007-2012), Assistant Professor, Kyung Hee University, Korea Jack Zhao, Postdoctoral fellow (2009-2011), Assistant project scientist, UCSD Xiaoduo Xie, Postdoctoral fellow (2008-2011), Scientist, Beigen Bin Zhao, Postdoctoral fellow (2009-2012), Assistant professor, Zhejiang University, China Ian Lian, Postdoctoral fellow (2007-2012) Seong Noh, MD/Ph.D. Student, 2001, Fellow, University of Washington Scott Stewart, Ph.D. Student, 2000, Research associate, the Salk Institute Xiaoli Zhan, Ph.D. Student, 2000, Postdoctoral fellow, UCLA Eric Tang, MD/Ph.D. student, 2002, Postdoctoral fellow, UCLA Haris Vikis, Ph.D. Student, 2003, Assistant Research scientist, Washington University Huira Chong, Ph.D. Graduate student (2005), Postdoctoral fellow, University of Michigan Jeeyong Lee, Ph.D. Student 2005, Postdoctoral fellow, Yongsei University, Korea Jennifer Aurandt, Ph.D. Student, 2005, Assistant Professor, Kettering University Robert Kruger, Ph.D. Student, 2005, Editor, Cell Mike Corradetti, MD/Ph.D. Student, 2006, Fellow, UPenn Medical School Qian Yang, Ph.D. Student, 2007, Postdoctoral fellow, University of Michigan Joe Lee, MD/Ph.D. Student, 2007, Columbia U Bin Zhao, Ph.D. Student, 2009, Zhejiang University Minkan Lu, Ph.D. Student (Zhejiang University) 2011 Li Li, Ph.D. Student 2011, Sanford Burnham Institute Rui Gong, Ph.D. Visiting student Thesis Committee 1993, M. Hull, Ph.D. 1994 K. Quadnt, Ph.D. 1995 M. Szczypka, Ph.D. 6 KunLiang Guan, Ph.D. 1997 Jirundon Yuvaniyama, Ph.D. , Hangjong Duan, Ph.D.; Deb Meyers, Ph.D. 1998 Larry Adams, Ph.D.; Mary Stefa, Ph.D. ; J. Clemens, Ph.D. ; C. Zimmerman, Ph.D. ; Witoon Titrasophon, Ph.D. ; Seong Noh, Ph.D. ; Sean Collin, Ph.D. 2000 Scott Stewart, Ph.D.; X. Liu, Ph.D.; Matt Wishart, Ph.D. 2000 2001 Sarah Ross, Ph.D.; John Stansberry, Ph.D. 2002 Steven Juris, Ph.D.; Eric Tang, Ph.D. 2003 Gary Meyer, Ph.D.; Claudia Fugerson, Ph.D.; Chuanyun Liu, Ph.D.; Timothy Blauwkamp, Ph.D.; Xiaohua Shen, Ph.D.; Mike Roth, Ph.D.; Haris Vikis, Ph.D.; Sunny Lee, Ph.D.; David Karnak, Ph.D. 2004 Huira Chong, Ph.D. 2005 Peng Peng, Ph.D.; Jeeyong Lee, Ph.D.; Stephen Carey, Ph.D.; Jason Kurzer, Ph.D.; Mattabhorn Phimphilai, Ph.D. 2006 Kunyoo Shin, Ph.D., Mike Corradetti, Ph.D., Brian Cha, Ph.D; Ifan Lodi.Ph.D 2007 Qiang Wang, Ph.D.; Matthew Veldam, Ph.D.; Matthew Pratt-Hyatt, Ph.D. 2009 Bin Zhao, Ph.D. 2011 Emi Casas, Ph.D.; Li Li, Ph.D.; Noel Warfel, Ph.D. 2012 Audrey O’Neal, Ph.D., Marina Kolesnichenko, Ph.D. (Oxford University) INVITED PRESENTATIONS (2010-) 7th Annual Cancer Drugs Research and Development Conference, La Jolla, Jan. 2010 University of California at San Diego, Department of Medicine, Jan. 2010 15th Aichi International Cancer Conference, Nagoya, Japan, March 2010 14th International Congress of Endocrinology, Kyoto, Japan, March 2010 LAM Conference, Cincinnati, Apr. 2010 Einstein College of Medicine, Bronx, Apr. 2010 SCBA Houston Chapter Symposium, Houston, May, 2010 Han Yang University, Seoul, Korea, May, 2010 Symposium of System Biology for Biomedical Application, Seoul, Korea, May, 2010 Nanjing University, Nanjing, China, May 2010 International Symposium on Neuro-Signaling, Wuhan, China, May, 2010 Neurooncology, UCSD, June, 2010 Cancer Biology, UCSD, June, 2010 Forth Military Medical University, July, 2010 Peking Union Medical College, July, 2010 University of California at Berkeley, Sep. 2010 FASEB Summer conference on AMPK, Kyoto, Japan, Oct. 2010 Xianshan Conference on Proteomics, Beijing, China, Oct. 2010 Department of pathology, UCSD, La Jolla, Oct. 2010 The Second workshop on the Hippo pathway, Rome, Italy, Nov. 2010 Cancer Metabolism Conference, IRB, Barcelona, Spain, Nov. 2010 mTOR Signaling in Health and Disease, Biochemical Society, London, UK, Nov. 2010 Zhejiang University, Hangzhou, China, Dec. 2010 Duke University, Department of Pharmacology and Cancer Biology, Jan. 2011 University of Nebraska Medical Center, March 2011 Shanghai Institute of Biochemistry and Cell Biology, China, March 2011 7 KunLiang Guan, Ph.D. Institute of Molecular and Cell Biology, Singapore, March 2011 AACR 102nd Annual Meeting, Orlando, April 2011 Northwestern University, Chicago, April 2011 36th Lineberger Symposium on Cancer Metabolism, UNC, Chapel Hill, April 2011 GSK Pharmaceuticals. Collegeville, April 2011 TRCP symposium, Yonsei University, Seoul, Korea, May 2011 Korean Society for Biochemistry and Molecular Biology Annual Meeting, Seoul, May 2011 Wuxi Pharm, Shanghai, China, May 2011 Agios Pharmaceutical, Cambridge, MA, May 2011 Cold Spring Harbor Symposium, Metabolism & Disease, June 2011 FASEB Summer conference on acetylation, Steamboat, June 2011 Molecular Therapeutics of Cancer conference, Pacific Grove, July 2011 FASEB summer conference on protein phosphorylation, Snowmass, July, 2011 Xiamen University, Xiamen, China, July 2011 SCBA conference, Guangzhou, China, July 2011 Guangzhou Institutes of Biomedicine and Health, July 2011 CBI Society Biannual Conference, China, Aug. 2011 FASEB Summer Conference, Nutrient Control of metabolism & Cell Signaling, Steamboat, Aug. 2011 Ontario Institute for Cancer Research, Toronto, Sep. 2011 Genentech, San Francisco, Sep. 2011 RIKEN-Cell Press Symposium, Kobe, Japan, Oct. 2011 MD Anderson Cancer Center, Houston, Oct. 2011 Mayo Clinic, Rochester, Oct. 2011 University of Illinois at Chicago, Nov. 2011 Nazarbayev University, Astana, Kazakhstan, Nov. 2011 Zhejiang University, Hangzhou, China, Nov. 2011 Tsinghua University, Beijing, China, Nov. 2011 Peking University, Beijing, China, Nov. 2011 Zing conference on Autophagy, Cancun Mexico, Dec. 2011 Institute of Molecular Biology, Academia Sinica, Taiwan, Jan. 2012 Scripps Research Institute, La Jolla, Jan, 2012 Oregon Health Sciences University, Portland, Feb. 2012 University of Utah, Salt Lake City, Feb. 2012 Keystone Symposium on Cancer Metabolism, Banff, Canada, Feb. 2012 AACR Annual meeting, Chicago, Apr. 2012 John Hopkins Medical School, Apr. 2012 6th AUHUPO Annual Meeting, Beijing, May, 2012 Ben May Symposium, Cancer Metabolism, University of Chicago, May, 2012 Growth regulation by the TOR pathway, Les Treiles, Nice, France, June, 2012 Phosphorylation & G-protein signaling, Gordon Research Conference, June 2012 Novartis, Shanghai, China, July, 2012 Post-translational regulation of cell signaling, Salk Institute, La Jolla, Aug. 2012 Cancer Metabolism symposium, Sanford Burnham Institute, La Jolla, Aug. 2012 Roswell Park Cancer Institute, Buffalo, Sep. 2012 8 KunLiang Guan, Ph.D. Beth Israel Deaconess Medical Center, Boston, Sep. 2012 Cell Signaling Technology, Salem, Sep. 2012 University of Wisconsin, Madison, Sep. 2012 Memorial Sloan-Kettering Cancer Center, New York, Sep. 2012 University of Alabama at Birmingham, Birmingham, Oct. 2012 Fourth International Stem cell Symposium, City of Hope National Medical Center, Duarte, Oct. 2012 Friedrich Miescher Institute, Basel, Oct. 2012 2012 Louis-Jeantet Symposium, Geneva, Oct. 2012 Pfizer Inc., La Jolla, Nov. 2012 Washington University, St. Louis, Jan. 2013 University of Southern California, Feb. 2013 AACR Annual Meeting, Washington DC, Apr. 2013 COMMITTEE AND ADMINISTRATIVE SERVICE 1994-03 Department Graduate Admission Committee (co-chair of the department recruiting committee) 1996-2001 Review Committee for Rackham Graduate School 1997-07 Student Award Committee 1998-03 PIBS admission committee 2002-07 MDRTC Grant Advisory Council 2002-07 MSTP Operating Committee 2003-06 Biomedical Research Council, member 2003 Faculty search committee chair, Biological Chemistry Department 2004 Faculty search committee chair, Life Sciences Institute 2008Department space committee 2008Co-leader, Biology Program, Moores Cancer Center 2012Executive Committee, Cancer Therapeutic Training Program 2012 Faculty Search Committee BIBLIOGRAPHY Peer reviewed research papers 1. 2. 3. 4. Farres, J., Guan, K-L., and Weiner, H. (1988) Signal peptide sequence of rat mitochondrial aldehyde dehydrogenase deduced from cDNA. Biochem. Biophys. Res. Comm. 150, 1083-1087 Guan, K-L., Pak, Y.K., Tu, G.C., Cao, Q.N., and Weiner, H. (1988) Purification and characterization of beef and pig liver aldehyde dehydrogenases. Alcoholism: Clin. Exp. Res. 12, 713-719 Farres, J., Guan, K-L., and Weiner, H. (1989) Primary structures of rat and bovine liver mitochondrial aldehyde dehydrogenase deduced from cDNA sequences. Eur. J. Biochem. 180, 67-74 Guan, K-L., and Weiner, H. (1989) Influence of the 5’-end region of aldehyde dehydrogenase mRNA on translational efficiency: potential secondary structure inhibition of translation in vitro. J. Biol. Chem. 264, 17764-17769. 9 KunLiang Guan, Ph.D. 5. 6 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. Guan, K-L., and Weiner, H. (1990) Sequence of the precursor of bovine liver mitochondrial aldehyde dehydrogenase as determined from its cDNA and its gene and its functionality. Arch. Biophys. Biochem. 277, 351-360. Guan, K-L., Haun, R.S., Watson, S.J., Geahlen, R.L., and Dixon, J.E. (1990) Cloning and expression of a protein-tyrosine-phosphatase. Proc. Natl. Acad. Sci. USA 87, 1501-1505. Guan, K-L. and Dixon, J.E. (1990) Protein tyrosine phosphatase activity of an essential virulence determinant in Yersinia. Science 249, 553-556. Guan, K-L., and Dixon, J.E. (1991) One step purification of eukaryotic proteins expressed in E. coli: An improved thrombin cleavage and purification procedure of fusion proteins with glutathione-S-transferase. Anal. Biochem. 192, 262-267. Bliska, J.B., Guan, K-L., Dixon, J.E., and Falkow, S.A. (1991) Tyrosine phosphate hydrolysis of proteins by an essential Yersinia virulence determinant. Proc. Natl. Acad. Sci. USA 88, 1187-1191. Guan, K-L., Broyles, S.S., and Dixon, J.E. (1991) Vaccinia virus encodes a Tyr/Ser protein phosphatase. Nature 350, 359-362. Guan, K-L., Deschenes, R.J., Qiu, H., Dixon, J.E. (1991) Cloning and expression of a yeast protein tyrosine phosphatase. J. Biol. Chem. 266, 12964-12970. Guan, K-L. and Dixon, J.E. (1991) Evidence for protein tyrosine phosphatase catalysis proceeding Via a cysteine-phosphate intermediate. J. Biol. Chem. 266, 17026-17030. (Named JBC classic paper, JBC 281, e42, 2006). Ni, L.-Y., Guan, K-L., Zalkin, H., and Dixon, J.E. (1991) De novo purine nucleotide biosynthesis: cloning and expression of a eukaryotic cDNA encoding 5-aminoimidazole4-carboxamide-ribonucleotide transformylase-IMP cyclohydrolase. Gene 106, 197-205. Guan, K-L., Deschenes, R.J., and Dixon, J.E. (1992) Isolation and characterization of a second protein tyrosine phosphatase gene, PTP2, from Saccharomyces cerevisiae. J. Biol. Chem. 267, 10024-10020 Guan, K-L., Hakes, D., Wang, Y., Park, H.D., Cooper, T.G., and Dixon, J.E. (1992) A novel yeast protein phosphatase related to the vaccinia virus VH1 phosphatase is induced by nitrogen starvation. Proc. Natl. Acad. Sci. USA, 89, 12175-12179. Millar, J.B.A., Russell, P., Dixon, J.E., and Guan, K-L. (1992) Negative regulation of mitosis by functionally overlapping PTPases in fission yeast. The EMBO J., 11, 49434952. Guan, K-L., Hakes, D., Park, H.D., Cooper, T.G., and Dixon, J.E. (1993). A eukaryotic homolog to viral Ser/Thr/Tyr phosphatase. Treds in Biochem. Sci. 18, 6. Zheng, C.F. and Guan, K-L. (1993) Cloning and characterization of two distinct human ERK activator kinases, MEK1 and MEK2, J. Biol. Chem. 268, 11435-11439. Zheng, C.F. and Guan, K-L. (1993) Dephosphorylation and inactivation of the mitogen activated protein kinases by a mitogen induced protein phosphatase. J. Biol. Chem. 268, 16116-16119. Guan, K-L., Farh, L., Marshall, T.K., and Deschenes, R.J. (1993) Normal mitochondrial structure and genome maintenance in yeast requires the dynamine like product of the MGM1 gene. Current Genetics 24, 141-148. Zheng, C.F. and Guan, K-L. (1993) Properties of MEKs, the kinases that phosphorylate and activate the extracellular signal-regulated kinases. J. Biol. Chem. 268, 23933-23939. 10 KunLiang Guan, Ph.D. 22. 23. 24. 25. 26. 27. 28. 29. 30. 31. 32. 33. 34. 35. 36. 37. Zheng, C.F. and Guan, K-L. (1994) Activation of MEK family kinases requires phosphorylation of two conserved Ser/Thr residues. The EMBO J. 13, 1123-1131. Zheng, C.F., Ohmichi, M., Saltiel, A.R., and Guan, K-L. (1994) Growth factor induced MEK activation is primarily mediated by an activator different from c-raf. Biochemistry, 33, 5595-5599. Zheng, C.F. and Guan, K-L. (1994) Cytoplasmic localization of the mitogen activated protein kinase activator, MEK. J. Biol. Chem. 269, 19947-19952. Frost, J.A., Alberts, A.S., Sontag, E., Guan, K-L., Mumby, M.C., and Feraminsco, J.R. (1994) Simian virus 40 small T antigen cooperates with mitogen activated kinases to stimulate AP-1 activity. Mol. Cell. Biol. 14, 6244-6252. Guan, K-L., Jenkins, C.W., Li, Y., Nichols, M.A., Wu, X., Matera, G., and Xiong, Y. (1994) Growth suppression by p18, a novel p16INK4/MTS1 and p14INK/MTS2-related CDK6 inhibitor, correlates with wild type pRb function. Genes & Dev. 8, 2939-2952. Guan, K-L. and Butch, E. (1995) Isolation and characterization of a novel dual specific phosphatase, HVH2, which selectively dephosphorylates the mitogen activated protein kinase. J. Biol. Chem. 270, 7197-7203. Pang, R., Zheng, C.-F., Guan, K-L., and Saltiel, A.R. (1995) Nerve growth factor stimulates a novel protein kinase in PC-12 cells that phosphorylates and activates MEK. Biochem. J. 307, 513-519. Pham, C.D., Arlinghaus, R.B., Zheng, C.-F., Guan, K-L., and Singh, B. (1995) Characterization of MEK1 phosphorylation by v-Mos protein. Oncogene 10, 1683-1688. Wu, Y., Han, M. and Guan, K-L. (1995) Mek-2, a Caenorhabditis elegans MAP kinase kinase, functions in Ras-mediated vulval induction and other development events. Genes & Dev. 9, 742-755. Kornfeld, K., Guan, K-L., and Horvitz, H.R. (1995) The C. elegans mek-2 is required for vulval induction and encodes a protein similar to the protein kinase MEK. Genes & Dev. 9, 756-768. Rui, D., Zheng, C.-F., Guan, K-L., and Williams, J. A. (1995) Activation of MAP kinase kinase (MEK) and Ras by cholecystokinin in rat pancreatic acini. Am. J. Physiol. 268, G1060-1065. Wang, Q.M, Guan, K-L., Roach, P.J., and Depaoli-Roach, A.A. (1995) Phosphorylation and activation of the ATP-Mg-Dependent Protein Phosphatase by the Mitogen Activated Protein Kinase. J. Biol. Chem.270, 18352-18358. Zhang, Z. Y., Zhou, G, Denu, J. M., Wu, L., Tang, X., Mondesert, O., Russell, P., Butch, E., and Guan, K-L. (1995) Purification and characterization of the low molecular weight protein tyrosine phosphatase, Stp1, from fission yeast S. pombe. Biochemistry 34, 1056010568. Chaurch, D.L., Guan, K-L. and Lambie, E.J. (1995) mek-2, mpk-1/sur-1 and let-60 ras are required for meiotic cell cycle progression in C. elegans. Development. 121, 25252535. Waters, S. B., Holt, K.H., Ross, S.E., Syu, L.J., Guan, K-L., Saltiel, A.R., Koretzky, G.A., and Pessin, J.E. (1995) Desensitization of Ras activation by a feedback disassociation of the SOS-Grb2 complex. J. Biol. Chem. 270, 20883-20886. Guan, K-L., Jenkins, C.W., Li, Y., Zariwala, M., Noh, S., Wu, X., and Xiong, Y. (1996) Molecular cloning of the CDK6 inhibitor p20 and demonstration of two distinct 11 KunLiang Guan, Ph.D. 38. 39. 40. 41. 42. 43. 44. 45. 46. 47. 48. 49. 50. 51. mechanismd of interaction with CDK proteins for two families of CDK inhibitors. Mol. Biol. Cell. 7, 57-70. Sugimoto,, T., Haneda, M., Togawa, M., Isono, M., Shikano, T., Araki, S.I., Nakahiko, T., Kashiwagi, S., Guan, K-L., and Kikkawa, R. (1996) Atrial natriuretic peptide induces the expression of MKP-1, a mitogen activated protein kinase phosphatase, in glomerular mesangial cells. J. Biol. Chem. 271, 544-547. Wu, X., Noh, S., Zhou, G., Dixon, J.E., Guan, K-L. (1996) Selective activation of MEK-1 but not MEK-2 by A-raf from epidermal growth factor stimulated Hela cells. J. Biol. Chem. 271, 3265-3271. Butch, E. and Guan, K-L. (1996) Characterization of ERK1 activation site mutants and the effect on recognition by MEK1 and EMK2. J. Biol. Chem. 4230-4235. Robinson, M.J., Cheng, M., Khokhlatchev, A., Ebert, D., Ahn, N., Guan, K-L., Stein, B., Goldsmith, E., and Cobb, M.H. (1996) Contributions of the mitogen-activated protein (MAP) kinase backbone and phosphorylation loop to MEK specificity.: J Biol Chem 271, 29734-29739. Gupta, A.K., Lee, Y.L., Galoforo, S.S., Berns, C.M., Martinez, A.A., Corry, P.M., Wu, X., and Guan, K-L. 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Zhang, H., Liu-CY, Zha, ZY., Zhao, B., Yao, J., Zhao, SM., Xiong, Y., Lie, QY., and Guan, K-L. (2009) TEAD transcription factors mediate the function of TAZ in cell growth and epithelial-mesenchymal transition. J. Biol. Chem. 284, 13355-62. 143. Zhou, X., Ikenoue, T., Chen, X., Li, L., Inoki, K., and Guan, K-L. (2009) Rheb controls misfolded protein metabolism by inhibiting aggresome and autophagy. Proc. Nat. Acad. Sci. 106, 8923-8. 144. Mori, H., Inoki, K., Opland, D., Münzberg, H., Villanueva, EC., Faouzi, M., Ikenoue, T., Kwiatkowski, D., MacDougald, OA., Myers, MG., and Guan, K-L. (2009) Critical roles for the TSC-mTOR pathway in -cell function. American J. Physiol. Endocrinol Metab 297, E1013-1022.. 145. Zhao, B., Li, L., Wang, C-Y, and Guan, K-L. (2010) A coordinated phosphorylation by Lats and CK1 regulates YAP stability through SCF-TRCP, Genes & Dev. 24, 72-85. 18 KunLiang Guan, Ph.D. 146. Li, Z., Zhao, B., Wang, P., Chen, F., Dong, Z., Yang, H., Guan, K-L., and Xu, Y. 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(2011) Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction. Mol. Cell 41, 139-49. Inoki, K., Mori, H., Wang, J., Suzuki, T., Hong, S., Yoshida, S., Blattner. S.M., Ikenoue, T., Rüegg, R.A., Hall, M.N., Kwiatkowski, D.J., Rastaldi, M.P., Huber , T.B., Kretzler, M., Holzman, L.B., Wiggins, R.C., Guan, K-L. (2011). mTORC1 activation in podocytes is a critical step in the development of diabetic nephropathy. J. Clin. Invest. 121, 181196. Zheng, M, Wang, Y.H, Wu, X.N, Wu, S.Q, Lu, B.J, Dong, M.Q, Zhang, H, Sun, P, Lin, S.C, Guan, K-L, and Han. J. (2011). Inactivation of Rheb by PRAK-mediated phosphorylation is essential for energy-depletion-induced suppression of mTORC1. Nature Cell Biol. 13, 263-272. Xie, X., Zhang, D., Zhao, B., Lu, M-K., You, M., Condorelli, G., Wang, C.Y., and Guan, K-L. (2011) IKKε and TBK1 activate AKT by direct phosphorylation. Proc. Natl. Acad. Sci. 108, 6474-9. Chen, Y., Zhang, J., Lin, Y., Lei, Q., Guan, K-L., Zhao, S., Xiong, Y. (2011). Tumor suppressor SIRT3 deacetylates and activates manganese superoxide dismutase (SOD2) to scavenge ROS. EMBO Report. 12, 534-41. Jiang, W., Wang, S., Xiao, M., Lin, Y., Lei, Q.Y., Xiong, Y., Guan, K-L., and Zhao, S. (2011). Acetylation regulates gluconeogenesis by promoting PEPCK1 degradation via recruiting the UBR5 ubiquitin ligase. Mol. Cell 43, 33-44. Lv, L., Li, D., Zhao, D., Lin, R., Chu, Y., Zhang, H., Zha., Z., Xu, Y., Li, Z., Wang, G., Huang, Y., Zhao, S., Xiong, Y., Guan, K-L., Lei, Q-Y. (2011) Acetylation Targets the M2 Isoform of Pyruvate Kinase for Degradation through Chaperone-Mediated Autophagy and Promotes Tumor Growth. Mol. Cell, 42, 719-30. Wu, Q., Liu, Y., Chen, C., Ikenoue, T., Qiao, Y., Li, C.S., Li, W., Guan, K-L., Liu, Y., and Zheng, P. (2011) The Tuberous Sclerosis Complex-Mammalian Target of Rapamycin Pathway Maintains the Quiescence and Survival of Naive T Cells. J. Immunol. 187, 1106-12. Gong, R., Li., L., Liu, Y., Wang, P., Yang, H., Wang, L., Cheng, J., Guan, K-L., and Xu, Y. (2011) Crystal Structure of Gtr1p-Gtr2p complex reveals new insights into the amino acid-induced TORC1 activation. Genes & Dev. 25, 1668-73. Yoshida, S., Hong, S., Suzuki, T., Nada, S., Mannan, AM., Wang, J., Okada, M., Guan, K-L., and Inoki, K. (2011) Redox regulates mTORC1 activity by modulating the TSC1/TSC2-Rheb GTPase pathway. J. Biol. Chem. 286, 32651-60. Zhou, X., Li, T., Feng, X., Hsiang, E., Xiong, Y., Guan, K-L., Lei, Q. (2012) Targeted polyubiquitylation of RASSF1C by the Mule and SCFβ-TrCP ligases in response to DNA damage. Biochem. J. 441, 227-36. 20 KunLiang Guan, Ph.D. 172. 173. 174. 175. 176. 177. 178. 179. 180. 181. 182. 183. 184. 185. 186. Zhao, B., Li, L., Wang, L., Wang, C.Y., Yu, J., and Guan, K-L. (2012) Cell detachment activates the Hippo pathway via cytoskeleton reorganization to induce anoikis and inhibit tumor metastasis. Genes & Dev. 26, 54-68. Zhang, T., Wang, S., Lin, Y., Ye, D., Xiong, Y., Zhao, S., Guan, K-L. (2012) Acetylation negatively regulates glycogen phosphorylase by recruiting protein phosphatase 1. Cell Metabolism 15, 75-87. Tang, F., Wu, Q., Ikenoue, T., Guan, K-L., Liu, Y., and Pan, Z. (2012) A critical role for rictor in T lymphopoiesis. J. Immunol. 189, 1850-7. Valbuena, N., Guan, K-L., and Moreno, S. (2012) The Vam6-Gtr1/Gtr2 pathway activates TORC1 in response to amino acids in fission yeast. J. Cell Sci. 125, 1920-8. Xiao, M., Yang, H., Xu, W., et al, Xiong, Y., and Guan, K-L. (2012) KG-dependent histone and DNA demethylases by fumarate and succinate that are accumulated in mutations of FH and SDH tumor suppressors. Genes & Development 26, 1326-38. Huang, W., Lv, X., Liu, C., Zha, Z., Zhang, H., Jiang, Y., Xiong, Y., Lei, Q., and Guan, K-L. (2012) The N-terminal phosphodegron targets TAZ for SCFβ-TrCP dependent degradation in response to PI3K inhibition. J. Biol. Chem. 287, 26245-53. Magee, J.A, Ikenoue T., Nakada, D., Lee, J.Y., Guan, K-L., and Morrison, S.J. (2012) Temporal changes in PTEN and mTORC2 regulation of hematopoietic stem cell selfrenewal and leukemia suppression. Cell Stem Cell 11, 415-428. Yu, F-X., Zhao, B., Panupinthu, N., Jewell, J. L., Wang, L., Zhao, J., Yan, H., Tumaneng, K., Li, H., Fu, X-D., Mills, G. B., and Guan, K-L. (2012) Regulation of the Hippo-YAP pathway by G-protein coupled receptor signaling. Cell 150, 780-91. Purohit, A.A., Li, W., Qu, C., Guan, K-L., and Liu, G. (2012) DSCAM Associates with UNC5C in Netrin-1-Mediated Growth Cone Collapse, J. Biol. Chem. 287, 27126-38. Mo, J.S., Yu, F-X., Gong, R., Brown, J.H., and Guan, K-L. (2012) Regulation of the Hippo-YAP pathway by protease activated receptor PAR. Genes & Dev. 26, 2138-2143. Tumaneng, K., Schlegelmilch, K., Russell, R.C., Yimlamai, D., Basnet, H., Mahadevan, N., Fitamant, J., Bardeesy, N., Camargo, F., and Guan, K-L. (2012) YAP mediates crosstalk between the Hippo and PI3K-TOR pathways by suppressing PTEN via miR-29. Nature Cell Biol. 14, 1322-1329. Kim, J., Kim, Y.C., Fang, C., Russell, R.C., Kim, J.H., Fan, W., Liu, R., Zhong, Q., and Guan, K-L. (2013) Differential regulation of distinct Vps34 complexes by AMPK in nutrient stress and autophagy. Cell 152, 290-303. Li, L. and Guan, K-L. (2013) Microtubule-associated protein/microtubule affinityregulating kinase 4 (MARK4) is a negative regulator of the mammalian target of rapamycin complex 1 (mTORC1). J. Biol. Chem. 288, 703-708. Yang, H., Liu, Y., Bai, F., Zhang, J.Y., Ma, S. H., Liu, J., Xu, Z., Zhu, H-G., Ling, Z.Q., Ye, D., Guan, K-L., and Xiong, Y. (2013) Tumor development is associated with dramatic decreases of TET gene expression and global 5-hydroxymethylcytosine. Oncogene, 32, 663-669. Wang, P., Dong, Q., et al., Ye. D., Guan, K-L., Xiong, Y., Qin, L.X., Chiang, D.Y. (2012). Mutations in isocitrate dehydrogenase 1 and 2 occur frequently in intrahepatic cholangiocarcinomas and share hypermethylation targets with glioblastomas. Oncogene, (in press). 21 KunLiang Guan, Ph.D. 187. 188. 189. Zhao, D., Zou, S-W., Liu, Y., Zou, X., Mo, Y., Wang, P., Xu, Y-H., Dong, B., Xiong, Y., Lei, Q-Y., and Guan, K-L. (2013) Lysine-5 acetylation negatively regulates lactate dehydrogenase A and is decreased in pancreatic cancer. Cancer Cell, 23, 464-476. Russell, R.C., Tian, Y., Yuan, H., Park, H.W., Chang, Y.Y., Kim, J., Jim, H., Neufeld, T., Dillin, A., Guan, K-L. (2013) ULK1 induces autophagy by phosphorylating Beclin-1 and activating Vps34 lipid kinase. Nature Cell Biol. (in press). Yuan, H.X., Russell, R., and Guan, K-L. (2013) Regulation of PIK3C3/VPS34 complexes by mTOR in nutrient stress-induced autophagy. Autophagy (in press). Peer-reviewed reviews 1. Clemens, J.C., Guan, K-L., Bliska, J.B., Falkow, S., and Dixon, J.E. (1991) Microbial Pathogenesis and tyrosine dephosphorylation: Surprising bedfellows. Mol. Microbiol. 5, 2617-2620. 2. Guan, K-L. (1994) The mitogen activated protein kinase signal transduction pathway: from the cell surface to the nucleus. Cellular Signaling 6, 581-589. 3. Li, Y., Jenkins, C. W., Nichols, M. A.,Wu, X., Guan, K-L., and Xiong, Y. (1996). p16 family inhibitors of cyclin-dependent kinase. Pezcoller Foundation Journal. 7, 57-82. 4. Guan, K-L. and Han, M. (1999) A G-protein signaling network mediated by an RGS protein. Genes & Development 13, 1763-1767. 5. Zhang, B. H. and Guan, K-L. (2001) Regulation of the Raf kinase by phosphorylation. Experimental Lung Res. 27, 269-295. 6. Zhan, X., Wishart, M. and Guan, K-L. (2001) Nonreceptor tyrosine phosphatase in cellular signaling: Regulation of mitogen activated protein kinase. Chemical Rev. 101, 2477-2496. 7. Chong, H., Vikis. H., and Guan, K-L. (2003) Regulation of the Raf family protein kinase. Cellular Signaling. 15, 463-469. 8. Wishart, M. and Guan, K-L. (2003) Protein phosphatase. Encyclopedia of Life Science (Nature Publishing Group). In press. 9. Guan, K-L. and Rao, Y. (2003) Signal Transduction Mechanisms Mediating Neuronal Responses to Guidance Cues. Nature Rev. Neuroscience 4, 941-956. 10. Li, Y., Corradetti, M., Inoki, K., and Guan, K-L. (2004) TSC2: filling the GAP of mTOR signaling. TIBS 29, 32-38. 11. Inoki, K., Qwyang, H., Li, Y., and Guan, K-L. (2005) TOR signaling in cell growth control. Microbiol. and Mol. Biol. Rev. 69, 79-100. 12. Inoki, K., Corradetti, and Guan, K-L. (2005) Disease associated with TOR Dysregulation. Nature Genetics. 37, 19-24. 13. Kruger, R., Aurandt., J., and Guan, K-L. (2005) Signaling of semaphorin in axon guidance and other biological processes. Nature Rev. Mol. Cell. Biol. 6, 789-800. 14. Inoki, K. and Guan, K-L. (2006) Complexity of the TOR signaling network. Trends in Cell Biol. 16, 206-12. 15. Corradetti, M. and Guan, K-L. (2006) Upstream of the mammalian target of rapamycin: do all roads pass through mTOR? Oncogene 25, 6347-60. 16. Lee, C.J, Inoki, K., and Guan, K-L. (2007) mTOR Pathway as a Target in Tissue Hypertrophy. Annu. Rev. Pharmacol. Toxicol. 47, 443-67. 22 KunLiang Guan, Ph.D. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. 29. 30. 31. 32. 33. 34. 35. 36. 37. Yang, Q. and Guan, K-L. (2007) Expanding mTOR signaling. Cell Research. 17, 666681. Zhao, B., Lei, Q.Y., and Guan, K-L. (2008) The Hippo-YAP pathway: new connections between regulation of organ size and cancer. Current Opinion in Cell Biology 20, 638646. Kim, E. and Guan, K-L. (2009) RAG GTPases in Nutrient-mediated TOR Signaling Pathway. Cell Cycle 8, 1014-1018. Wang, W. and Guan, K-L. (2009) AMPK and Cancer. Acta Physiol. 196, 55-63. Inoki, K. and Guan, K-L. (2009) Tuberous sclerosis complex, implication from a rare genetic disease to common cancer treatment. Human Molecular Genetics 18, R94-100. Zhao, B., Li, L., Lei, Q., and Guan, K-L. (2010) The Hippo-YAP pathway in organ size control and tumorigenesis. Genes & Dev. 24. 862-874. Zhao, B., Li L, and Guan, K-L. (2010) Hippo signaling at a glance. J. Cell Sci. 123, 4001-6. Guan, K-L. and Xiong, Y. (2011) Regulation of intermediate metabolism by protein acetylation. TIBS 36, 108-116. Kim, J. and Guan, K-L. (2011) Amino acid signaling in mTOR activation. Ann. Rev. Biochem. 80, 1001-32. Zhao, B., Tumaneng, K., and Guan, K-L. (2011) The Hippo tumor suppressor pathway in organ size control, tissue regeneration and stem cell self-renewal. Nature Cell Biol. 13, 877-83. Russell, R.C. Fang, C., and Guan, K-L. (2011) An emerging role for TOR signaling in mammalian tissue and stem cell physiology. Development, 138, 3343-56. Inoki, K. Kim, J., and Guan, K-L. (2011) AMPK and mTOR in cellular energy homeostasis and drug targets. Ann. Rev. Pharmacol. Toxicol. 52, 381-400. Oermann, E.K., Guan, K-L., and Xiong, Y. (2012) Alterations of metabolic genes and metabolites in cancer. Semin. Cell Dev. Biol. 23, 370-80. Tumaneng, K., Russell, R. C., and Guan, K-L. (2012) Organ size control the Hippo and TOR pathways. Current Biology 22, R368-R379. Hong, W. and Guan, K-L., (2012) The YAP and TAZ transcription coactivators: key downstream effectors of the mammalian Hippo pathway. Seminar in Cell Dev. Biol. 23, 785-93. Xiong, Y. and Guan, K-L. (2012) Mechanistic insights into the regulation of metabolic enzymes by acetylation. J. Cell Biol. 198, 155-64. Yang, H., Ye, D., Guan, K-L., and Xiong, Y. (2012). IDH1 and IDH2 mutations in tumorigenesis: mechanistic insights and clinical perspectives. Clin. Cancer Res. 18, 5562-5571. Yan, H-X., Xiong, Y., and Guan, K-L. (2013) Nutrient sensing, metabolism, and cell growth control. Mol. Cell. 49, 379-387. Jewell, J.L. and Guan, K-L. (2013) Nutrient signaling to mTOR and cell growth. TIBS. (in press). Yu, F. and Guan, K-L. (2013) The Hippo Pathway: Regulators and Regulations. Genes & Dev. 27, 355-371. Jewell, J.L. Russell, R.C., and Guan, K-L. (2013) Amino acid signaling, mTOR. Nature Rev. Mol. Cell. Biol. 14, 133-139. 23 KunLiang Guan, Ph.D. Non peer-reviewed publications 1. Weiner, H., Wang, T., Guan, K-L., Farres, J., Pak, Y.K., Saigal, D., Cunningham, S., and Jeng, J.J. (1988) Application of Molecular Biological Techniques in Alcohol Research: Study of Aldehyde Dehydrogenase in Biomedical and Social Aspects of Alcohol and Alcoholism (Kuriyama, K., Takada, A., & Ishii, H., eds) pp. 377-380, Elsevier Science Publishers B.V. 2. Guan, K-L., and Weiner, H. (1987) Molecular biology studies of beef liver aldehyde dehydrogenase in Enzymology and Molecular Biology of Carbonyl Metabolism: aldehyde dehydrogenase, aldo-keto reductase and alcohol dehydrogenase (Weiner, H. & Flynn, T.G., eds) pp. 15-24, Alan R, Liss, Inc., New York. 3. Woodford, T.A., Guan, K-L., and Dixon, J.E. (1991) Expression of rat PTP1 in Normal and transformed cells. Adv. Prot. Phosphatases 6, 503-524. 4. Dixon, J.E., Hakes, D., and Guan K-L. (1993) Improved vectors for expression and purification of recombinant proteins. Methods in Genetics 2, 44-53. 5. Guan, K-L. and Dixon, J.E. (1993) Bacterial and viral protein tyrosine phosphatases. Seminars in Cell Biology . 4, 389-396. 6. Wang, Y. and Guan, K-L. (1996) Regulation and function of the mitogen activated protein kinase (MAPK) signal transduction pathway. Bio/Pharma Quaterly. 1(4), 23-26. 7. Vikis, H. and Guan, K-L. (2002) Regulation of the Ras-MAPK pathway at the level of Ras and Raf. Genetic Engineering (Jane Setlow eds) 24, 49-66. 8. Lanigan, T., Vikis, H., Guan, K-L. (2003) Control of the Ras-MAPK signaling pathway by phosphorylation and scaffolding proteins. Res. Signpost 37, 661-615. 9. Vikis, H. and Guan, K-L. (2004) Glutathione-S-transferase-fusion based assays for studying protein-protein interactions. Methods Mol. Biol. 261, 175-186. 10. Li, Y, Inoki, K, Vikis, H, Guan, K-L. (2005) Measurements of TSC2 GAP Activity Toward Rheb. Methods Enzymol. 407, 46-54. 11. Zhao, S. and Guan, K-L. (2008) Substrate selectivity APPLies to Akt substrate selectivity. Cell 133, 399-400. 12. Zhao, B., Lei, Q., and Guan, K-L. (2009) Harness the Power: New Insights into the Inhibition of YAP/ Yorkie. Dev. Cell. 16, 321-322. 13. Li, L. and Guan, K-L. (2009) Amino acid signaling to TOR activation: Vam6 functioning as a Gtr1 GEF. Mol. Cell 35, 543-545. 14. Zhao, B., Lei, Q., and Guan, K-L. (2009) MST Out and HCC In. Cancer Cell 16, 363364. 15. Li, L. and Guan, K-L. (2010) Rag GTPases in TORC1 activation and nutrient signaling. Enzymes, 27, 75-87. 16. Zhao, S. and Guan, K-L. (2010) IDH1 mutation structures reveal a mechanism of dominant inhibition. Cell Res. 20, 1279-81. 17. Xie, X. and Guan, K-L. (2011) Ribosomes in mTORC2 regulation. Cell 144, 640-642. 18. Egan, d.F., Kim, J., Shaw, R., and Guan, K-L. (2011) The autophagy initiating kinase ULK1 is regulated via opposing phosphorylation by AMPK and mTOR. Autophagy. 7, 643-4. 24 KunLiang Guan, Ph.D. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. Kim, J. and Guan, K-L. (2011) Regulation of autophagy initiating kinase ULK1 by nutrients: Role of mTORC1 and AMPK. Cell Cycle, 10. 1337-1338. Lu, M.K., Gong, X.G., and Guan, K-L. (2011) mTOR in podocyte function: Is rapamycin good for diabetic nephropathy? Cell Cycle, 10, 3415-6. Mori, H., and Guan, K-L. (2012) Tissue-specific ablation of tsc1 in pancreatic beta-cells. Methods Mol. Biol. 821, 407-409. Xiong, Y., Lei, Q., Zhao, S., and Guan, K-L. (2012) Regulation of glycolysis and gluconeogenesis by acetylation of PKM and PEPCK. Cold Spring Harbor Symposia on Quantitative Biology. Vol. LXXVI, 285-9. Ye, D., Xiong, Y., and Guan, K-L. (2012) The mechanisms of IDH mutations in tumorigenesis. Cell Res. 22, 1102-4. Yu, FX., Mo, JS., and Guan, K-L. (2012) Upstream regulators of the Hippo pathway. Cell Cycle, 22, 4077-8. Klionsky, D.J. et al (2012) Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy, 8, 445-544. Ye, D., Ma, S., Xiong, Y., and Guan, K-L. (2013) (R)-2-hydroxylglutarate as the key effector of IDH promoting oncogenesis. Cancer Cell 23, 274-276. Zhao, D., Xiong, X., Lei, Q-Y., and Guan, K-L. (2013) LDH-A Acetylation: Implication in Pancreatic Cancer Initiation and Diagnosis. Oncotarget (in press). Kim, J. and Guan, K-L. (2013) AMPK connects energy stress to PIK3C3/VPS34 regulation. Autophagy (in press). 25