NSS Bio Supplementary notes_Photosynthesis The Process That Feeds the Biosphere Life on Earth is solar powered. photosynthesis to capture light energy from the sun and convert it to chemical energy stored in sugars and other organic molecules. Plants and other autotrophs are the pro____ of the biosphere. Photosynthesis nourishes almost all the living world directly or indirectly. All organisms use organic compounds for energy and for carbon skeletons. Organisms obtain organic compounds by one of two major modes: autotrophic nutrition or heterotrophic nutrition. Autotrophs produce their or____ molecules from CO2 and other inorganic raw materials obtained from the environment. Autotrophs are the ultimate sources of organic compounds for all heterotrophic organisms. Autotrophs are the producers of the biosphere. Autotrophs can be separated by the source of energy that drives their metabolism: Photoautotrophs use l____ as a source of energy to synthesize organic compounds. Photosynthesis occurs in plants, algae, some other protists, and some prokaryotes. Chemoautotrophs harvest energy from oxid_____ inorg____ substances, such as sulfur and ammonia. Chemoautotrophy is unique to prokaryotes. Heterotrophs live on organic compounds produced by other organisms. These organisms are the consumers of the biosphere. Some heterotrophs feeds on other organisms. Animals feed this way. Other heterotrophs decompose and feed on dead organisms or on organic litter, like feces and fallen leaves. Most fungi and many prokaryotes get their nourishment this way. Almost all heterotrophs are completely dependent on photoautotrophs for food and for oxygen, a by-product of photosynthesis. 10-1 Photosynthesis converts light energy to the chemical energy of food All green parts of a plant have chloroplasts. However, the leaves are the major site of photosynthesis for most plants. The color of a leaf comes from chlorophyll, the green pigment in the chloroplasts. Chlorophyll plays an important role in the absorption of light energy during photosynthesis. Chloroplasts are found mainly in mesophyll cells forming the tissues in the interior of the leaf. O2 exits and CO2 enters the leaf through microscopic pores called stomata in the leaf. Veins deliver water from the roots and carry off sugar from mesophyll cells to nonphotosynthetic areas of the plant. Each chloroplast has two membranes around a central aqueous space, the stroma. In the stroma is an elaborate system of interconnected membranous sacs, the thylakoids. Chlorophyll is located in the thylakoids. Thylakoids may be stacked into columns called grana. Mesophyll Chloroplast 5 µm Outer membrane Stroma Granum Thylakoid Thylakoid space Clues to the Mechanism of photosynthesis Intermembrane space Inner membrane 1 µm Evidence that chloroplasts split water molecules enabled researchers to track atoms through photosynthesis. 10-2 Powered by light, the green parts of plants produce organic compounds and O2 from CO2 and H2O. The simplified equation of photosynthesis is: 6CO2 + 6H2O + light energy C6H12O6 + 6O2 In its simplest possible form: CO2 + H2O + light energy [CH2O] + O2 [CH2O] represents the general formula for a sugar. The overall chemical change during photosynthesis is the reverse of cellular respiration. One of the first clues to the mechanism of photosynthesis came from the discovery that the O2 given off by plants comes from H2O, not CO2. Before the 1930s, the prevailing hypothesis was that photosynthesis split carbon dioxide and then added water to the carbon: Step 1: CO2 C + O2 Step 2: C + H2O CH2O C. B. van Niel challenged this hypothesis. In the bacteria that he was studying, hydrogen sulfide (H2S), not water, is used in photosynthesis. These bacteria produce yellow globules of sulfur as a waste, rather than oxygen. Van Niel proposed this chemical equation for photosynthesis in sulfur bacteria: He generalized this idea and applied it to plants, proposing this reaction for their photosynthesis: CO2 + 2H2O [CH2O] + O2 + H2O Thus, van Niel hypothesized that plants split water as a source of electrons from hydrogen atoms, releasing oxygen as a byproduct. Other scientists confirmed van Niel’s hypothesis twenty years later. They used 18O, a heavy isotope, as a tracer. They could label either C18O2 or H218O. They found that the 18O label only appeared in the oxygen produced in photosynthesis when water was the source of the tracer. Hydrogen extracted from water is incorporated into sugar, and oxygen is released to the atmosphere. 10-3 Photosynthesis is a redox reaction. Respiration is an exergonic redox process; energy is rel_____ from the oxidation of sugar. o Electrons associated with sugar's hydrogens lose potential energy as carriers transport them to ox____, forming water. Photosynthesis is an endergonic redox process; energy is req____ to reduce carbon dioxide. o Oxidation is the loss of el_____ or hyd_____ atoms. Oxidation reactions rel_____ energy. Reduction is gain of electrons or hydrogen atoms and is associated with a g___ of energy. Oxidation and reduction occur tog_____. When a molecule is oxidized, another must be reduced. These coupled reactions are called oxidation-reduction or redox reactions. Food is highly reduced (has many hydrogens). The chemical pathways of respiration in oxidize the food (remove hydrogens), producing ATP (usable energy) for the cell. Light is the energy source that raise pot_____ energy of electrons as they are moved from water to sugar. Photosynthesis reverses the direction of electron flow in respiration. Water is split and el______ transferred with H+ from w____ to c_____ di_____, reducing it to s____. o Because the electrons increase in pot_____ en_____ as they move from water to sugar, the process requires en____. The energy boost is provided by l____. Photosynthesis is two processes, each with multiple stages. The light reactions (photo) convert solar energy to ch_____ energy. The Calvin cycle (synthesis) uses energy from the light reactions to incorporate CO2 from the atmosphere into s____. In the light reactions, light energy absorbed by chlorophyll in the thy_____ drives the transfer of electrons and hydrogen from water to NADP+ (nicotinamide adenine dinucleotide phosphate), forming N____. NADPH, an electron acceptor, provides reducing power via energized el____ to the Calvin cycle. Water is split in the process, and __ is released as a by-product. The light reaction also generates A___ (using chemiosmosis), in a process called photophosphorylation. Thus light energy is initially converted to chemical energy in the form of two compounds: N____ and A__. The Calvin cycle begins with the incorporation of CO2 into organic molecules, a process known as car___ fixation. 10-4 The fixed carbon is red____ with electrons provided by NADPH. A__ from the light reactions also powers parts of the Calvin cycle. Thus, it is the C____ cycle that makes sugar, but only with the help of ATP and NADPH from the l____ reactions. The metabolic steps of the Calvin cycle are sometimes referred to as the lightindependent reactions, because none of the steps requires light directly. Nevertheless, the Calvin cycle in most plants occurs during daylight, because that is when the light reactions can provide the NADPH and ATP the Calvin cycle requires. While the light reactions occur at the thy_____, the Calvin cycle occurs in the st____. The light reactions convert solar energy to the chemical energy of ATP and NADPH Light as a source of energy The thylakoids convert light energy into the che____ energy of ATP and NADPH. Light is a form of electromagnetic radiation. Wavel______ of electromagnetic radiation range from less than a nanometer (gamma rays) to more than a kilometer (radio waves). The entire range of electromagnetic radiation is the electromagnetic spectrum. The most important segment for life is a narrow band between 380nm (violet) to 750 nm (red), the band of vi____ light. While the sun radiates a full electromagnetic spectrum, the atmosphere selectively screens out most wavelengths, permitting only visible light to pass in significant quantities. Visible light is the radiation that drives photosynthesis. When light meets matter, it may be refl_____, trans_____, or abs_____. Different pigments absorb light of different wavel_____, and the wavelengths that are absorbed disappear. A leaf looks green because chlorophyll, the dominant pig____, absorbs r__ and b___ light, while transmitting and reflecting g____ light. 10-5 Absorption spectrum An absorption spectrum plots a pigment’s light absorption versus wavelength. The light reaction can perform work with those wavelengths of light that are absorbed. There are several pigments in the thylakoid that differ in their absorption spectra. Chlorophyll a, the dominant pigment, absorbs best in the red and violet-blue wavelengths and least in the green. Other pigments have different absorption spectra. Action spectrum Collectively, these photosynthetic pigments determine an overall action spectrum for photosynthesis. An action spectrum measures changes in the r___ of photosynthetic activity (for example, O2 release) as the wave______ is varied. The action spectrum of photosynthesis was first demonstrated in 1883 in an elegant experiment performed by Thomas Engelmann. In this experiment, different segments of a filamentous alga were exposed to different wavelengths of light. Areas receiving wavelengths favorable to photosynthesis produced excess O2. Engelmann used the abundance of aerobic bacteria that clustered along the alga at different segments as a measure of O2 production. Role of photosynthetic pigments The action spectrum of photosynthesis does not match exactly the absorption spectrum of any one photosynthetic pigment, including chlorophyll a. Only chlorophyll a participates directly in the light reaction, but accessory photosynthetic pigments absorb light and transfer en____ to chlorophyll a. 10-6 Excitation of pigment molecule by light When a molecule absorbs light (photon), one of that molecule’s el____ is elevated to an ex____ state. Excited electrons are unst___. Generally, they drop to their ground state in a billionth of a second, releasing heat energy. Some pigments, including chlorophyll, can also release a photon of light in a process called fluorescence. If a solution of chlorophyll isolated from chloroplasts is illuminated, it will fluoresce and give off heat. Chlorophyll excited by absorption of light energy produces very different results in an intact chloroplast than it does in isolation. 10-7 In the thylakoid membrane, chlorophyll is organized along with proteins and smaller organic molecules into photosystems. At the center is a primary electron acceptor, which accepts an excited electron from the chlorophyll a molecule. The solar-powered transfer of an electron from a chl_______ a molecule to the primary electron acceptor is the first step of the light reactions. From the primary elecron acceptor, the photoexcited electrons pass along an el_____ trans____ sy_____ (ETS). As these electrons “fall” to a l____ energy level along the ETS, their energy is harnessed to produce A__. The enzyme NADP+ reductase transfers electrons from ETS to N____. Two electrons are required for NADP+’s reduction to N_____. NADPH will carry the red____ power of these highenergy electrons to the Calvin cycle. The loss of an electron from the chlorophyll molecule leaves it temporarily oxid____ and carries a pos____ charge. An enzyme extracts electrons from w___ and supplies them to the oxidized reaction center. This reaction splits water into two hyd_____ ions and an o_____ atom that combines with another oxygen atom to form O2. Thus the light reactions use the solar power of photons absorbed to provide chemical energy in the form of ATP and reducing power in the form of the electrons carried by NADPH. 10-8 Reference: chemiosmosis and ATP production Chloroplasts and mitochondria generate ATP by the same mechanism: chemiosmosis. In both organelles, an electron transport chain /system pumps protons across a membrane as electrons are passed along a series of increasingly electronegative carriers. This transforms redox energy to a proton-motive force in the form of an H+ gradient across the membrane. ATP synthase molecules harness the proton-motive force to generate ATP as H+ diffuses back across the membrane. There are differences between oxidative phosphorylation in mitochondria and photophosphorylation in chloroplasts. Mitochondria transfer chemical energy from food molecules to ATP; chloroplasts transform light energy into the chemical energy of ATP and reducing power in the form of NADPH. The Calvin cycle uses ATP and NADPH to convert CO2 to sugar ATP and NADPH produced by the l____ reactions are used in the Calvin cycle to reduce carbon dioxide to sugar. The Calvin cycle is similar to the Krebs cycle in that the starting material is reg_______ by the end of the cycle. C____ enters the Calvin cycle as CO2 and leaves as sugar. The Calvin cycle actually produces a three-carbon sugar glyceraldehyde 3-phosphate (G3P/PGAL). 10-9 For the Calvin cycle to synthesize one molecule of sugar (G3P), t_____ molecules of CO2 must enter the cycle. The cycle may be divided into three phases: Phase 1: Carbon Fixation. This reaction is catalyzed by the enzyme RuBP carboxylase (rubisco) – one of the most abundant proteins on Earth. o The Calvin cycle begins when each molecule of CO2 is attached to a f___-carbon sugar, ribulose biphosphate (RuBP). o The product of this reaction is an unstable s__-carbon intermediate that immediately spl__ into two molecules of 3-phosphoglycerate (PGA). o For every three CO2 molecules that enter the Calvin cycle, t____ RuBP molecules are carboxylated forming s__ molecules of 3-phosphoglycerate. Phase 2: Reduction. This endergonic reduction phase is a two-step process that couples ATP hydrolysis with the reduction of 3-phosphoglycerate (PGA) to glyceraldehyde phosphate (PGAL). 10-10 An enzyme phosphorylates PGA by transferring a phosphate group from ATP. This reaction: o produces 1, 3-bisphosphoglycerate (DPGA). o uses six A__ molecules to produce six molecules of DPGA. o prepare DPGA for the addition of high-energy el_____ from NADPH. Electrons from NADPH red___ the DPGA to glyceraldehyde 3-phosphate (G3P /PGAL). G3P is the same three-carbon sugar produced when glycolysis splits glucose. For every three CO2 molecules that enter the Calvin cycle, six G3P molecules are produced, only one of which can be counted as net gain. The cycle begins with three five-carbon RuBP molecules – a total of 15 carbons. The six G3P molecules produced contain 18 carbons, a net gain of three carbons from CO2. One G3P molecule exits the cycle; the other 5 are recycled to regenerate 3 molecules of RuBP. G3P produced by the Calvin cycle is the r__ material used to synthesize glucose and other carbo_________. Phase 3: Regeneration of Starting Material (RuBP). A complex series of reactions rearranges the carbon skeletons of five G3P molecules into three R___ molecules. These reactions require three A__ molecules. RuBP is thus reg_______ to begin the cycle again. A review of the importance of photosynthesis as producer of organic food and metabolic energy On a global scale, photosynthesis makes about 160 billion metric tons of carbo_______ per year. No other chemical process on Earth is more productive or is as important to life. Light reactions capt___ solar energy and use it to: o produce ATP o transfer electrons from water to NADP+ to form NADPH The Calvin cycle uses ATP and NADPH to fix CO2 and produce sugar. Photosynthesis transforms light energy to che____ bond energy in sugar molecules. 10-11 Sugars made in chloroplasts supply the entire plant with chemical energy and carbon skeletons to synthesize org____ molecules. Nonphoto________ parts of a plant depend on organic molecules exported from leaves in veins. The disaccharide sucr___ is the transport form of carbohydrate in most plants. Sucrose is the raw material for cellular resp______ and many anabolic pathways in nonphotosynthetic cells. Much of the sugar is glucose – the monomer linked to form cellulose, the main constituent of plant cell w__. Most plants make more organic material than needed. Plants consume about 50% of the photosynthate as fuel for cellular respiration. Extra sugars are synthesized into st____ and stored in storage cells of roots, tubers, seeds, and fruits. Hetero____ depends directly or indirectly on plants as food for sources of org____ molecules and metabolic en____. FACTORS WHICH AFFECT THE RATE OF PHOTOSYNTHESIS A) General Factors a) Light Intensity In general, increased light intensity increases the rate of photosynthesis until another factor, usually carbon dioxide, becomes lim_____. At the usual carbon dioxide levels in the atmosphere (~0.03%) the maximum photosynthetic rate is reached in many plants, at only quarter to half full sunlight. If we starts from darkness, as the light intensity increases, a point is reached when the intake of carbon dioxide for photosynthesis exactly b______ its output in respiration. This is called the c__________ point. Further increase in light intensity will result in carbon dioxide being ab____ and oxygen ev____. 10-12 Q. Trees in woodland communities are usually s__ plants, adapted to a high light intensity. However, their seedlings are often capable of tolerating shade conditions. The shade plants usually reach their compensation point at a l_____ light intensity than the sun plants. (The compensation point for the former may be as low as 0.3 to 1.0% of maximum daylight, as compared with 1.3 to 7.5% for sun plants. This is shown diagrammatically) 1 Comment on the ecological significance of the different compensation points for sun and shade plants. 2 Draw a table to show the morphological adaptations in sun and shade plants? 3 The utilisation of carbon dioxide in photosynthesis is much less temperature sensitive than the production of carbon dioxide in respiration. This fact has important bearings on glasshouse management. In seasons of low light intensity it is essential to keep temperatures at the safe minimum for the crop concerned. Explain why it is essential to do this. 4 How could the safe minimum temperature be defined? b) Quality of light The action spectrum for photosynthesis has peaks in the red and blue regions, yet the wavelengths available to a plant may vary in different habitats. Q. What would you expect to changes in the quality of light available under a woodland? What physiological adaptations are expected in the plants striving at the lower strata inside a woodland? c) Carbon dioxide Concentration Q.1 The normal CO2 concentration in air is ~0.03%. What does the figure indicates about the role of CO2 concentration in the process of photosynthesis ? 10-13 Under bright sunlight and a temperature of 20--25°C, with a plentiful supply of water, the amount of carbon dioxide in the atmosphere (0.03%) seems likely to be the l_________ factor for most plants. Increasing the level of the gas up to 1%* shows an increase in the photosynthetic rate of most species. d) Temperature Q. Comment on the relationship between the rate of photosynthesis and temperature. Since the ‘dark’ reaction of photosynthesis is a series of en_______-controlled reactions, it is not surprising that increasing the temperature speeds up the rate of the reaction. Photosynthesis usually doubles in rate for every 10°C rise in temperature up to about 30°C, which is probably the opt_____ temperature for most plants for sh___ periods (about 30 minutes). Rates at higher temperatures for longer periods soon begin to drop, probably due to e______ destruction and lim______ availability of carbon dioxide. About 40° C the rate falls off rapidly as the enzymes are de_______. In temperate regions the range of temperature for photosynthesis for the majority of the plants is probably around 10- 35° C. Tropical species do not usually photosynthesise below about 5° C, whereas some conifers may continue to do so around freezing point. e) Water Less than 1% of the water absorbed by most plants is needed for photosynthesis, so it is n__ likely that its deficiency would affect the process directly. The indirect effects of water shortage however, are likely to retard photosynthesis, causing dehy_______ which will affect the structure of protoplasm and hence its metabolism. The structural arrangement of the chloroplast is likely to be affected too. It was originally thought that water deficit closing the stomata would reduce carbon dioxide absorption, but there is much experimental evidence to suggest that even stomata appearing closed when viewed microscopically are still sufficiently open to admit the gas. f) Mineral salts Mineral salts are not directly involved as raw materials for photosynthesis, but shortage of either ir___ or m_________ affects the rate of chlorophyll production and hence, indirectly, the photosynthetic 10-14 rate. Some ions, such as potassium and some trace elements, such as molybdenum, are also required, though the exact function of some of them is obscure. Macronutrients are required in large amounts Carbon C Component of all organic compounds Oxygen O supplied by air & water Hydrogen H Component of all organic compounds Nitrogen* N Part of chlorophyll, amino acids, proteins, nucleic acids Phosphorus* P Used in photosynthesis and almost all aspects of growth, ATP, NADP+, nucleic acids Potassium* K Activates enzymes, used in formation of sugar and starch Calcium Ca Used in cell growth and division, part of cell wall Magnesium# Mg Part of chlorophyll, activates enzymes Sulfur S Part of amino acids and proteins Micronutrients are required in trace amounts Boron B Affects reproduction Chlorine Cl Aids in root growth Copper Cu Used in clorophyll, activates enzymes Iron Fe Used in Photosynthesis, cytochromes Manganese Mn activates enzymes Sodium Na Used for water movement Zinc Zn Part of enzymes, used in auxins Molybdenum Mo Used in nitrogen fixation Nickel Ni Liberates Nitrogen Cobalt Co Fixates Nitrogen Silicon Si Makes tougher cell walls: enhances heat and drought tolerance B) Limiting Factors Concept: the functioning of an organism is controlled or limited by that essential environmental factor or combination of factors present in the least favorable amount. Photosynthesis is a complex process, involving many fa___ and raw materials_____. If any one of these factors is NOT at the opt______ level or is in short sup___ then it may hold up the rest of the process and it is called a limiting factor. Review questions: 1. Explain the concept of limiting factors with reference to light intensity, temperature, and concentration of CO2. 10-15 light: rate of photosynthesis increases as light intensity increases photosynthetic rate reaches plateau at high light levels o because photosystems are absorbing light at a maximum rate CO2: photosynthetic rate reaches plateau at high light levels up to a maximum when rate levels off o because ribulose bisphosphate carboxylase is fixing carbon at a maximum rate temperature: rate of photosynthesis increases with increase in temperature up to optimal level / maximum o because greater kinetic energy creates more collisions between enzymes and substrates high temperatures reduce the rate of photosynthesis o because high temperature denatures enzymes o by breaking intermolecular forces o altering the active sites o reducing the fit between enzymes and substrates 10-16 Q. The effect of different light intensity on the photosynthetic rate of an intact leaf of a flowering plant measured at two different concentrations of carbon dioxide (300 and 600 parts per million (ppm) was studied and the results summarized in the following table: Photosynthetic rate (Net C02 fixed in mg per 100 cm2 leaf area per hour) Light intensity (kilolux) 300 ppm C02 0 -2.0 4 1.5 8 5.0 14 10.4 18 14.0 22 15.0 28 15.0 32 15.0 50 15.0 80 15.0 a) Present the results in graphical form. 600 ppm C02 -2.0 2.4 6.8 13.4 17.8 22.3 29.0 30.0 30.0 30.0 5m b) Describe how the light intensity affects the rate of photosynthesis of the leaf. 3m c) How does the performance of the leaf differ when put into the two different carbon dioxide concentrations? 4m d) Account for the photosynthetic rate at zero light intensity. Identify and explain the points at which there is no net of carbon dioxide by the leaf. fixation 4m e) With light intensity at 10 kilolux and CO2 concentration at 300 ppm, explain how you would expect the photosynthetic rate of the leaf to change under i) light wind, and ii) moderate water deficiency conditions. 4m 10-17