Practical Lec2/Genetic Dr.sarab DNA Structure — DNA consists of two molecules that are arranged into a ladder-like structure called a Double Helix. — A molecule of DNA is made up of millions of tiny subunits called Nucleotides. — Each nucleotide consists of: 1. Phosphate group 2. Pentose sugar 3. Nitrogenous base • Deoxyribose Sugar – sugar molecule containing 5 carbons that lose the OH (hydroxyl group) on its 2’ carbon • Phosphate group – group of 4 oxygen atoms surrounding a central phosphorus atom found in the backbone of DNA • Nitrogenous base – an alkaline, cyclic molecule containing nitrogen • The source of variation in DNA is found in the nitrogenous bases. • 4 nitrogenous bases exist: Purines: Adenine (A) and Guanine (G) – both are double-ringed structures Pyrimidines: Thymine (T) and Cytosine(C) – single-ringed structures • RNA is usually single-stranded and generally does not form double helices. • The carbon atoms in the five-carbon sugar are numbered clockwise, starting with the carbon atom to the right of the oxygen. The first one is known as the one prime (1’). • In DNA, the nitrogenous base is attached to the 1’ carbon by a glycosyl bond • DNA consists of 2 antiparallel strands of nucleotides. • Antiparallel – parallel, but running in opposite directions; the 5’end of one strand of DNA aligns with the 3’end of the other strand in a double helix. • Purines are nitrogenous bases that have 2 rings of carbon: adenine and guanine • Pyrimidines are nitrogenous bases that have only 1 ring of carbon: thymine and cytosine. • One purine must combine with one pyrimidine for the complementary base pairing, otherwise the DNA structure would look “wonky”. • Nucleotides are 0.34nm apart • To complete one turn of the helix, you need 10 nucleotides • The 2 strands of DNA run anti-parallel. One strand runs in the 5’ to 3’ direction, the other runs n the 3’ to 5’ direction. • The 3’ end terminates with the hydroxyl group of the deoxyribose sugar. The 5’ end terminates with a phosphate group. • 5’ – ATGCCGTTA – 3’ • 3’ – TACGGCAAT – 5’ — - Each base will only bond with one other specific base.(Hydrogen bound) — Adenine (A)==Thymine (T) — Cytosine (C)≡Guanine (G) — - Because of this complementary base pairing, the order of the bases in one strand determines the order of the bases in the other strand. — - To crack the genetic code found in DNA we need to look at the sequence of bases. — The bases are arranged in triplets called codons. A G G - C T C - AA G - T C C - TA G T C C - GAG - TT C -AG G - AT C - A group of three bases (a triplet) controlsthe production of a particular amino acid in the cytoplasm of the cell - The different amino acids and the order in which they are joined up determines the sort of protein being produced - This is known as the triplet code - Each triplet codes for a specific amino acid - The amino acids are joined together in the correctsequence to make part of a protein - A gene is a section of DNA that codes for a protein. - Each unique gene has a unique sequence of bases. - This unique sequence of bases will code for the production of a unique protein. — It is these proteins and combination of proteins that give us a unique phenotype.