ARTICLES PUBLISHED ONLINE: 31 JANUARY 2010 | DOI: 10.1038/NPHYS1513 Static control logic for microfluidic devices using pressure-gain valves James A. Weaver1 *, Jessica Melin2 , Don Stark1 , Stephen R. Quake2 and Mark A. Horowitz1 Microfluidic technology has developed greatly in recent years, enabling multiple analysis systems to be placed on a microfluidic chip. However, microfluidic large-scale integration of control elements analogous to those achieved in the microelectronics industry is still a challenge. We present an integrated microfluidic valve, compatible with standard soft-lithography processes, which has a pressure gain much greater than unity. We show that this enables integration of fully static digital control logic and state storage directly on-chip, ultimately enabling microfluidic-state machines to be designed. Outputs from this digital control logic can then be used to control traditional analyte flow valves. This strategy enables much of the bulky external hardware at present used to control pneumatically driven microfluidic chips in the laboratory to be transferred onto the microfluidic chip, which drastically reduces the required number of external chip connections. T he advancement of microfluidic technology has reduced both feature sizes and required analyte volumes, thus enabling multiple analysis systems to function simultaneously on a single chip. The ability to carry out multiple, parallel analyses makes microfluidic chips an enabling tool for many high-throughput assays in areas such as medical diagnostics and microbiology1–3 . However, a large increase in the number of external connections has accompanied this increase in parallelism. Large-scale integration of microfluidic control elements analogous to those achieved in the microelectronics industry would reduce connection counts, but such integration is still a challenge. The main difficulty is in creating an integrated microfluidic component with pressure gain analogous to the voltage gain of the most fundamental electronics component, the transistor. Gain enables multiple stages of logic to be cascaded in series without energy loss between each stage. Gain enables the output of one logic stage to be boosted to a level adequate to operate as input for the next stage. Here, we present an integrated microfluidic valve with a pressure gain much greater than unity. This gain valve is fully compatible with standard soft-lithography processes4 and requires no new materials or equipment to manufacture. We show the implementation of integrated fully static digital control-logic gates, including latches and decoders, directly on-chip, ultimately enabling microfluidicstate machines to be designed. Outputs from this highly compact digital control logic can then be used to control traditional analyte flow valves. This strategy enables much of the bulky external hardware at present used to control pressure-driven microfluidic chips in the laboratory to be transferred onto the microfluidic chip, thus drastically reducing the required number of external chip connections. By reducing these connections, it is possible to implement highly integrated microfluidic chips for portable applications, such as chemical field analysis and point-of-care medical diagnostics. This technology will allow standard digital microelectronic design methodologies to be directly translated to microfluidic devices. Microfluidic devices have found important applications in biophysics in areas such as immunology5 , protein interactions6 , stem-cell culture7 , diagnostics8,9 and structural biology10 . Soft lithography has emerged as a method of choice for many microfluidic systems owing to its low cost, ease of fabrication and the biological compatibility of soft-lithographic materials, such as elastomeric polydimethylsiloxane (PDMS; ref. 4). Monolithic PDMS membrane valves11 allow both timing of reagent flows and integration of some control components such as multiplexers and demultiplexers12,13 directly on-chip. Unfortunately, off-chip control logic for these devices increases the number of external connections to the chip. To reduce these connections, most work to date has focused on developing structures that are used to directly control reagent flows14 . We use a different and powerful approach: integrated on-chip control structures implemented separately from structures carrying out chemical analysis on-chip, enabling both to be optimally designed. A recent publication15 presents a similar approach using pneumatically actuated PDMS valves based on those of ref. 16 using vacuum pressure. However, the use of vacuum can cause air to penetrate through the bulk PDMS into the reagent microchannels, thus causing potentially catastrophic consequences or requiring an active pump to expel these bubbles. In our approach, all microfluidic channels are filled with liquid and use positive pressure, thus avoiding these challenges. In addition, our work presents logic components that are drastically smaller in size; that is, the latch we present occupies approximately 5 mm2 whereas that presented in ref. 15 occupies 35 mm2 . Small size is very important for compact large-scale integrated microfluidics, especially in handheld portable applications. We present a device with the necessary pressure amplification to achieve true digital outputs from multiple stages of logic circuits, which is easily built using standard soft lithography. With this device, it is possible to build true static fluidic digital control logic and on-chip state storage. Our design approach is illustrated in Fig. 1a. Fluidic control logic integrates pressure-gain valves and operates with deionized water in the microfluidic control channels. The digital output pressure from the control logic subsequently opens or closes regular non-gain valves, which are in direct contact with analyte fluid in the analysis part of the chip. Note that output levels in this technology correspond to pressure, not flow. Valves in the analysis section can have any morphology compatible with standard soft-lithography fabrication techniques. Because the on-chip digital control logic is separate from the chemical analysis components, standard design 1 Department of Electrical Engineering, Stanford University, Stanford, California 94305-4060, USA, 2 Department of Bioengineering, Stanford University and Howard Hughes Medical Institute, Stanford, California 94305-4060, USA. *e-mail: jaweaver@stanford.edu. 218 NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. NATURE PHYSICS DOI: 10.1038/NPHYS1513 a ARTICLES On-chip bio/chem-analysis system On-chip fluidic control logic Pressurized DI water Reagent control valve Latch Logic Valves used have Valves used have pressure gain < 1 pressure gain >> 1 b External world Microfluidic chip Microfluidic bio/chem-analysis system (with non-gain valves in contact with analyte fluids) Transfer output to individual control lines 1 Off-chip serial control input 11010...0100 1 0 1 0 0 1 0 00 0 1 0 Fluidic state register Parallel transfer 1 1 0 1 0 0 Fluidic shift register Shifting direction Figure 1 | Microfluidic control-logic scheme. a, Schematic of the control-logic fundamental approach. On-chip control blocks are distinct from on-chip analyte flow channels. The control blocks contain fully static digital fluidic logic and state storage realized by gain valves. Deionized water is used as the working fluid. The output of the control-logic block connects to control channels in the bio/chem-analysis area of the chip. These control channels directly control non-gain valves, which are in contact with the analyte fluid. b, The number of off-chip control lines can be reduced by serially inputting new control states, using a fluidic shift register comprised of a number of serially connected latches. Here, binary inputs ‘0’ and ‘1’ correspond to low and high pressure, respectively. The shift-register contents are then loaded in parallel into the fluidic register, where the outputs are decoded to control the microfluidic bio/chem-analysis system. With this approach, a small number of (for example, five) input lines can control an arbitrarily large number of on-chip analyte flow control lines. tools may be borrowed from the microelectronics industry to design microfluidic control circuits. Figure 1b illustrates the power of this design strategy. A digital control block addresses the common problem of an unmanageably large number of input–output chip connections required for high-throughput chips by drastically reducing this number. The control-logic block consists of (1) a shift register, which accepts external control input serially (in a bit-by-bit manner), and (2) a state register, which accepts and holds the output of the shift register in a parallel manner (all bits at once). Bit states ‘0’ and ‘1’ correspond to low or high pressures, respectively. The n-bit shift register consists of n serially connected digital latches, and the n-bit state register of n parallel connected latches, where a latch is a single-bit digital state-storage component (see Supplementary Fig. S3). Only five inputs are required (control data input, two load inputs, which trigger the loading of control data inputs, supply pressure and ambient ‘ground’ pressure) to produce an arbitrary number of defined control-logic outputs. To construct fluidic control-logic devices, a valve with pressure gain is needed; a control ‘signal’ of lower pressure must be able to modulate fluid flow at a higher pressure. Numerous approaches to creating such valves and microfluidic logic have been previously reported. These include silicon valves17,18 and glass–elastomer valves16,19,20 . The latter valves are large, occupying approximately 1 mm2 of area. Glass–elastomer valves can be used to create a form of pulse-mode digital logic, and complex integrated logic functions have been demonstrated using this approach21 . Pulsemode logic, however, is not an ideal logic family owing to its complex timing constraints. Unlike static logic, where a signal corresponds to a statically held pressure, signals in pulse-mode logic are pressure pulses. In designing pulse-mode logic, propagation delays and pulse width must be carefully considered to maintain the timing coherence required for proper operation. Achieving this balance can be difficult, and few design tools are available. Digital state storage has been successfully demonstrated using glass–elastomer valves to create dynamic latches16 and by using non-Newtonian working fluids22 . Dynamic latches, however, must be periodically refreshed to avoid data loss, and the behaviour of non-Newtonian fluids can be complex. We address these issues with a pressure-gain valve implemented entirely in standard planar soft lithography that with required bonding area occupies 0.28 mm2 and enables fully static control-logic gates and latches to be integrated on-chip. NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. 219 NATURE PHYSICS DOI: 10.1038/NPHYS1513 ARTICLES a Source layer Source Exhaust layer Membrane layer Exhaust Control layer Disc Control Rigid disk Orifice b Source layer Flow Exhaust layer Membrane layer Flow Control layer Figure 2 | Top and cross-sectional views of the gain-valve design. The gain valve consists of four PDMS layers: control layer; membrane layer containing the rigid SU-8 disc, which enables force summation; exhaust layer; source layer. a, The valve closed. Pressure in the control line has forced the membrane layer into contact with the exhaust layer, sealing off the orifice and stopping flow through the valve. Force summation occurs over the rigid disc, giving pressure gain. b, The valve open. Low pressure in the control line enables the membrane to relax, opening the valve. The red arrow shows the direction of fluid flow through the valve. The scale bars in the photographs are 300 µm long. a Opening threshold curve 200 175 100 Pressure (kPa) PS (kPa) 120 Gain = 3 150 125 100 75 50 25 0 AND gate output pulse b 25 50 75 60 40 20 Gain = 15 0 80 0 100 125 150 175 200 0 5 10 PC (kPa) c 15 Time (s) 20 25 30 Latch operation 140 120 Pressure (kPa) 100 80 D 60 LD 40 /LD Q out 20 0 0 0.5 1.0 1.5 2.0 2.5 3.0 Time (min) 3.5 4.0 4.5 5.0 Figure 3 | Performance graphs. a, Opening threshold pressure of 10 gain valves. The source line pressure, which is the pressure across the valve, is plotted against the control pressure at which the valve just opens. The dashed line indicates a pressure gain of unity. The valves have an initial incremental gain of approximately 15, which decreases to 3 at source pressures above 100 kPa. b, Low-to-high and high-to-low transitions measured at the output of an AND gate showing exponential behaviour. The low-to-high time delay (measured at 50%) is 500 ms, and the high-to-low time delay is 50 ms at 50% threshold. c, Measured pressure waveforms for a static latch. With the LD input high and the LD input (labelled /LD in the figure) low, the Q output (blue) follows the D input (red). With the LD input low and the LD input high, the Q output remains latched high, dropping only when LD goes low. 220 NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. NATURE PHYSICS DOI: 10.1038/NPHYS1513 a ARTICLES Control-logic area of chip Logic output Exhaust (ambient) Pressure supply Bio/chem-analysis area of chip Analysis area Analyte input control input Analyte output Source layer Plow Exhaust layer Plow Membrane layer Plow Plow Control input Gain valve b Non-gain valve Rigid disc Control-logic area of chip Logic output Exhaust (ambient) Pressure supply Control layer Bio/chem-analysis area of chip Analysis area control input Analyte input Analyte output Phigh Phigh Phigh Control input Gain valve Non-gain valve Figure 4 | Interconnection of on-chip control logic to analyte control valves. The control logic (inside the green box) uses deionized water as a working fluid and incorporates the gain valve. The control-logic output is in the form of high–low pressures. This control-logic output connects to the control inputs of non-gain membrane valves controlling analyte flows in the bio/chem-analysis area of the chip (inside the red box). The control-logic working fluid and the reagent flows never mix. a, When the control input pressure is low (Plow ), the gain valve is open and the supply pressure is exhausted to ambient. The output pressure from the control-logic block is low (Plow ). b, When the control input is high (Phigh ), the gain valve is closed and the output pressure from the control block essentially becomes the supply pressure (Phigh ), thus closing the non-gain valve. The greatest design challenge in constructing a valve with pressure gain is the highly elastic nature of elastomeric materials such as PDMS. When subjected to a force, all materials show deformation and this is characterized by Young’s modulus, E (refs 23, 24). Elastomers have very low E (for example, 400–800 kPa for PDMS) and show large deformations when subjected to modest force. This makes it difficult to build structures with the mechanical advantage needed for pressure gain greater than unity. However, this can be achieved by integration of a stiff material that is compatible with multilayer soft-lithography fabrication techniques. Some valves with integrated stiff materials have been previously presented, including a membrane valve with a steel disc embedded in PDMS to realize a magnetically driven pump25 , a MEMS-based iron–nickel membrane26 , and a parylene–silicon-based valve27 . However, the valve of ref. 25 is fairly large: the embedded steel discs are 5 mm in diameter, and the valves of refs 26 and 27, although compact, require specialized manufacturing techniques and materials not compatible with planar soft lithography. Our valve, shown in Fig. 2, consists of four layers and is fully compatible with standard soft-lithography fabrication processes: (1) source layer, (2) disc layer, which incorporates a rigid disc made from SU-8, (3) exhaust layer and (4) control layer (see Supplementary Information for fabrication details and valve dimensions). When pressure is applied to the control port, the disc layer is driven into the exhaust layer until they are in contact, thus sealing off the valve orifice and stopping fluid flow through the gain valve (Fig. 2a). With no pressure in the control port, the working fluid flows from the source line through the valve orifice to the exhaust port (Fig. 2b). For switching applications, the exhaust port is maintained at a low pressure relative to the source line. With the valve closed, the control pressure acts over the entire bottom side of the disc layer, whereas the source pressure acts only over the area of the orifice. The rigid disc (E ∼ 1 GPa) deforms minimally and enables force summation across its surfaces. Thus, in the closed state, the upper bound on the incremental pressure gain is set by the ratio of the disc to orifice diameters: Psource Ddisc 2 AP = = (1) Pcontrol Dorifice In our design, the disc diameter is 140 µm, and the orifice diameter is 30 µm, which gives a pressure-gain upper bound of 22. In addition to pressure gain, the valve also has a pressure threshold. This is the control pressure required to drive the disc layer into contact with the exhaust port ceiling at zero source line pressure. Using the design dimensions (Supplementary Fig. S1) and a value of 500 kPa for the shear modulus of PDMS, the threshold pressure is 34 kPa using finite-element simulation. Figure 3a shows the measured opening threshold pressures for a representative sample of ten gain valves; all showed openingpressure gains greater than unity. The source line pressure, PS , is plotted against the control port pressure, PC , at which a closed valve just opens (exhaust line pressure is at ambient pressure). The slope of the PS versus PC curve gave an average incremental gain of 15, which is fairly close to the predicted upper bound (equation (1)). As the source line pressure increases, the exhaust layer begins to deform into the exhaust port, reducing the gain to 3 for source line pressures above 100 kPa. This incremental gain of 3 was consistent up to 172 kPa, the maximum PS value tested. NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. 221 NATURE PHYSICS DOI: 10.1038/NPHYS1513 ARTICLES a b Buffer c AND gate PDD PDD PDD IN1 • IN2 Out IN IN2 Reference pressure d OR gate IN1 Reference pressure IN2 = IN1 = 1 e Inverter Q IN1 + IN2 IN1 Reference pressure IN2 = 1 IN1 = 0 Decoder IN1 IN2 PDD IN2 f Latch LD D LD Y0 PDD Y3 Y1 IN Q IN Y2 LD D LD Reference pressure Reference pressure IN = 0 IN1 IN2 Y0 D IN2 = 0 IN1 = 1 IN2 = 0 IN1 = 1 IN = 1 LD LD IN2 = IN1 = 0 Y3 Y1 Q Y2 IN2 = IN1 = 0 Figure 5 | Schematics and photomicrographs of implemented logic. The logic states ‘0’ and ‘1’ correspond to low and high pressure, respectively. a, Simple buffer. The valve is in series with a fluidic resistor, and the output is at the valve’s source line. When the valve is closed, the output pressure is high enough to close a similar gain valve; when the valve is open, the pressure drop across the resistor creates an output pressure low enough to open a similar gain valve. Fluidic resistors are created in the exhaust layer because its thin cross-section allows for compact devices. b, Two-input AND gate. Flow paths are shown for pressure inputs {IN1, IN2} = 11, 01 and 0. c, Two-input OR gate. Flow paths are shown for a similar sequence of input pressure levels as for the AND gate. d, Simple inverter, showing flow paths for input pressure low and input pressure high. e, Static latch with dual-input load enable (see Supplementary Fig. S3 and Movie M1). Lines unused in this implementation are covered by blue cross-hatching. f, Two-input to four-output decoder. Correct operation of the decoder was verified with a supply pressure of 172 kPa. The two inputs were walked through all four possible combinations: 0, 01, 10 and 11 (where 1 = supply pressure). For each of these combinations, the correct output line was at supply pressure, whereas the remaining three outputs were low (see Supplementary Movie M2). The scale bars in the photographs are 300 µm long. Figure 4 demonstrates how the gain valve can be incorporated in a total lab-on-chip device. Here a representative single gain valve is shown, but in reality multiple connected gain valves are used to create several control components contained in the control-logic area of the chip. The output of the integrated gain valve is at its source channel, which also forms the input to the control input of the analysis area of the chip. The analysis area of the chip does not contain any gain valves, only non-gain valves. Constructing digital logic gates from the gain valves requires a pressure signal from the output source flow that is sufficient to control another valve. Analogous to resistor–transistor logic, an early solid-state electronic logic family28 , we place a fluidic resistor in series with the valve’s source line (see Fig. 5a). With the orifice blocked, there is no flow through the valve, and the pressure at the source line input to the valve rises to the supply level, PS , which is sufficient to close the valve of a similarly constructed buffer. When fluid can flow through the valve, the pressure loss across the resistor drops the pressure at the source line input below the threshold level of subsequent gates. Using Poiseuille’s law, we calculated an open resistance for the valve of 1.31 × 1013 Pa s m−3 ; experimental measurement yielded a value of 1.41 × 1013 Pa s m−3 . The fluidic resistor pressure drop is set to be at least 10 times that of the valve itself, resulting in an output low pressure that is 10% of the source pressure. Figure 3b shows the measured pressure output swing, and the output low level is 222 10% of the supply pressure. The interconnection tubing we use has a measured resistance of 4.96 × 1011 Pa s m−3 per millimetre of length, so 28 mm of routing yields a resistance equal to the resistance of the valve itself. For AND gates (Fig. 5b), two valves are placed in parallel; high pressure is required at both inputs to stop flow through the resistor and enable the output to go high. Placing two valves in series produces a fluidic OR gate (Fig. 5c). High pressure at either valve stops the flow, giving the supply pressure of PDD at the source-line end of the resistor. With OR gates, care must be taken to size the fluidic resistor large enough such that the pressure drop across the series valves still gives an output level low enough not to close valves in succeeding logic stages. Inverters are designed with equal-size fluidic resistors connected to both the source and exhaust (Fig. 5d). The gate output is taken from the exhaust side of the lower resistor. When the valve is blocked the output pressure is zero, and when the valve is open the output pressure is half of the supply pressure PDD . As shown in Fig. 3a, this degraded high pressure level is still high enough to close a non-inverting buffer; as long as each inverter is followed by a non-inverting stage, the gates operate correctly. To verify gate operation, AND, OR and inverter gates were fabricated (Fig. 5b–d) and tested. The non-inverting AND and OR gates operate correctly with source pressures above 52 kPa, and inverters operate correctly for source pressures above 117 kPa. Because the output of an inverter is half the source pressure, these NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. NATURE PHYSICS DOI: 10.1038/NPHYS1513 ARTICLES two results indicate that mixed inverting and non-inverting logic must have a source pressure of at least 138 kPa to operate properly. Graphs of source supply pressure versus transition thresholds are shown in Supplementary Fig. S2. Lifetime and characterization testing is ongoing, but gain valves in an AND gate operating at 103 kPa have been cycled more than 10,000 times without observable gain reduction or defect. These gates (AND, OR, inverter) form a complete set of logic functions29 . Any desired binary function can be implemented with combinations of these gates, and their static nature ensures that a correct result is obtained after a finite time delay. Figure 3b shows the measured pressure-versus-time trace of a single AND gate; the rise and fall delay times measured at a threshold of 50% of full swing are 500 ms and 50 ms respectively, which is comparable to timing of the technology presented in ref. 15. This delay is caused by the displacement of the volume of the measurement apparatus through the fluidic resistor for the rising transition and through the open valve for the falling transition, and reflects their 10:1 resistance ratio. The volume displacement of the measurement apparatus was approximately six times the control-volume displacement of a single valve. In real applications, the displacement volume and the delay depend linearly on the number of input gates connected to an output. However, because every gate generates a full swing output, an arbitrary number of gates can be placed in series. Using lithographically produced microvias30 to interconnect the source, exhaust and control channels, we constructed a latch (Fig. 5e) and a two-into-four binary decoder (Fig. 5f). Note that the technology presented in ref. 15 also requires vias; however, these were realized by a more labour-intensive procedure of hole punching using a blunt-tipped syringe. Our latch is fully static; once loaded, it will hold its state indefinitely, as shown by the measured latch output pressure trace in Fig. 3c. The slightly increased low output level results from the two valves in series in the OR gates used. Increasing the pressure drop across the fluidic resistor (see Fig. 5e) will lower this level. In Supplementary Fig. S3 and Movies M1,M2 a schematic diagram of latch operation and movies of an operating latch and two-to-four decoder are shown. Finally, it should be noted that ring oscillators can easily be made by connecting an odd number of (for example, five) inverters in series, providing on-chip timing sources. Received 8 July 2009; accepted 17 December 2009; published online 31 January 2010 References 1. Melin, J. & Quake, S. R. Microfluidic large-scale integration: The evolution of design rules for biological automation. Annu. Rev. Biophys. Biomol. Struct. 36, 213–231 (2007). 2. Dittrich, P. S., Tachikawa, K. & Manz, A. 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Additional information The authors declare no competing financial interests. Supplementary information accompanies this paper on www.nature.com/naturephysics. Reprints and permissions information is available online at http://npg.nature.com/reprintsandpermissions. Correspondence and requests for materials should be addressed to J.A.W. NATURE PHYSICS | VOL 6 | MARCH 2010 | www.nature.com/naturephysics © 2010 Macmillan Publishers Limited. All rights reserved. 223