CALIFORNIA, BERKELEY
UNIVERSITY OF
CALIFORNIA, BERKELEY
419 Latimer Hall
Berkeley, CA 94720-1460
TEL: (510) 643-9057
FAX: (510) 642-9675
Web: www.chem.berkeley.edu
Department of Chemistry
Michael A. Marletta, Professor and Chairperson.
Degrees Offered: M.S, Ph.D.
Fields of Specialization: Analytical, Bioinorganic,
Bioorganic, Biophysical, Chemical Biology, Environmental, Inorganic & Organometallic, Nanochemistry and Materials, Solid State Synthesis, Molecular
Structure & Dynamics, Nuclear, Organic, Physical,
Physical Chemistry of Materials, Polymer, Theoretical, and Surface and Interfacial Chemistry.
Interdisciplinary Program: Chemical Biology (with
Molecular and Cell Biology, Chemical Engineering
and Bioengineering).
ALIVISATOS, A. PAUL (b.1959) Professor. A.B,
1981, University of Chicago; Ph.D, 1986, University of
California, Berkeley. Postdoctoral Fellow, 1986-1988,
AT&T Bell Laboratories. Materials Science. Nanocrystals: Scaling laws, synthesis, and materials design targets. TEL: (510) 643-7371 FAX: (510) 642-6911
Web: www.cchem.berkeley.edu/~pagrp/
Email: alivis@berkeley.edu
Elena V. Shevchenko, Jeffrey B. Kortright, Dmitri V. Talapin, Shaul Aloni and A. Paul Alivisatos, Quasi-ternary nanoparticle superlattices through nanoparticle design, Adv. Mater. (Weinheim, Ger.), 19, 4183-4188 (2007).
Andreu Cabot, Victor F. Puntes, Elena Shevchenko, Yadong Yin, Lluis Balcells, Matthew A. Marcus, Steven M.
Hughes and A. Paul Alivisatos, Vacancy Coalescence during
Oxidation of Iron Nanoparticles, J. Am. Chem. Soc, 129,
10358-10360 (2007).
Maksym V. Kovalenko, Wolfgang Heiss, Elena V.
Shevchenko, Jong-Soo Lee, Harald Schwinghammer, A. Paul
Alivisatos and Dmitri V. Talapin, SnTe Nanocrystals: A New
Example of Narrow-Gap Semiconductor Quantum Dots, J.
Am. Chem. Soc, 129, 11354-11355 (2007).
Sunhee Kim, Yadong Yin, A. Paul Alivisatos, Gabor A.
Somorjai and John T. Yates, Jr, IR Spectroscopic Observation of Molecular Transport through PtCoO Yolk-Shell Nanostructures, J. Am. Chem. Soc, 129 (2007).
Haitao Liu, Jonathan S. Owen and A. Paul Alivisatos,
Mechanistic Study of Precursor Evolution in Colloidal Group
II-VI Semiconductor Nanocrystal Synthesis, J. Am. Chem.
Soc, 129, 305-312 (2007).
S. Kim, Y. Yin, A. P. Alivisatos, G. A. Somorjai and J. T.
Yates, Jr, IR spectroscopic observation of molecular transport through Pt@CoO yolk-shell nanostructures, J. Am.
Chem. Soc, 129, 9510-9513 (2007).
L. Feng, J. Y. Park, Y. Cui, P. Alivisatos, J. Shcrier, B.
Lee, L. W. Wang and M. Salmeron, Mechanical and electrical properties of CdTe tetrapods studied by atomic force microscopy, J. Chem. Physics, 127, 18 (2007).
Emory M. Chan, Matthew A. Marcus, Sirine Fakra, Mariam ElNaggar, Richard A. Mathies and A. Paul Alivisatos,
Millisecond Kinetics of Nanocrystal Cation Exchange Using
Microfluidic X-ray Absorption Spectroscopy, J. Phys. Chem.
A, 111, 12210-12215 (2007).
Deborah M. Aruguete, Matthew A. Marcus, Liang-shi Li,
Andrew Williamson, Sirine Fakra, Francois Gygi, Giulia A.
Galli and A. Paul Alivisatos, Surface Structure of CdSe Nanorods Revealed by Combined X-ray Absorption Fine Structure Measurements and ab Initio Calculations, J. Phys. Chem.
C, 111, 75-79 (2007).
Aihua Fu, Weiwei Gu, Benjamin Boussert, Kristie Koski,
Daniele Gerion, Liberato Manna, Mark Le Gros, Carolyn A.
Larabell and A. Paul Alivisatos, Semiconductor Quantum
Rods as Single Molecule Fluorescent Biological Labels,
Nano Lett, 7, 179-182 (2007).
Joshua Schrier, Denis O. Demchenko, Lin-Wang Wang
and A. Paul Alivisatos, Optical Properties of ZnO/ZnS and
ZnO/ZnTe Heterostructures for Photovoltaic Applications,
Nano Lett, 7, 2377-2382 (2007).
Dmitri V. Talapin, James H. Nelson, Elena V. Shevchenko, Shaul Aloni, Bryce Sadtler and A. Paul Alivisatos, Seeded Growth of Highly Luminescent CdSe/CdS Nanoheterostructures with Rod and Tetrapod Morphologies, Nano Lett, 7,
2951-2959 (2007).
Ilan Gur, Neil A. Fromer, Chih-Ping Chen, Antonios G.
Kanaras and A. Paul Alivisatos, Hybrid Solar Cells with Prescribed Nanoscale Morphologies Based on Hyperbranched
Semiconductor Nanocrystals, Nano Lett, 7, 409-414 (2007).
Bjoern M. Reinhard, Sassan Sheikholeslami, Alexander
Mastroianni, A. Paul Alivisatos and Jan Liphardt, Use of
plasmon coupling to reveal the dynamics of DNA bending
and cleavage by single EcoRV restriction enzymes, Proc.
Natl. Acad. Sci. U. S. A, 104, 2667-2672 (2007).
Richard D. Robinson, Bryce Sadtler, Denis O. Demchenko, Can K. Erdonmez, Lin-Wang Wang and A. Paul Alivisatos, Spontaneous Superlattice Formation in Nanorods
Through Partial Cation Exchange, Science (Washington, DC,
U. S.), 317, 355-358 (2007).
Andreu Cabot, Rachel K. Smith, Yadong Yin, Haimei
Zheng, Bjorn M. Reinhard, Haitao Liu and A. Paul Alivisatos, Sulfidation of Cadmium at the Nanoscale, ACS Nano, 2,
1452-1458 (2008).
A. Paul Alivisatos, Birth of a Nanoscience Building Block,
ACS Nano, 2, 1514-1516 (2008).
Denis O. Demchenko, Richard D. Robinson, Bryce Sadtler, Can K. Erdonmez, A. Paul Alivisatos and Lin-Wang
Wang, Formation mechanism and properties of CdS-Ag2S
nanorod superlattices, ACS Nano, 2, 627-636 (2008).
G. Dukovic, M. G. Merkle, J. H. Nelson, S. M. Hughes and
A. P. Alivisatos, Photodeposition of Pt on colloidal CdS and
CdSe/CdS semiconductor nanostructures, Adv. Mat, 20,
4306-4311 (2008).
Jiwen Zheng, Philip S. Lukeman, William B. Sherman,
Christine Micheel, A. Paul Alivisatos, Pamela E. Constantinou and Nadrian C. Seeman, Metallic nanoparticles used to
estimate the structural integrity of DNA motifs, Biophys. J,
95, 3340-3348 (2008).
Jared M. Ashcroft, Weiwei Gu, Tierui Zhang, Steven M.
Hughes, Keith B. Hartman, Cristina Hofmann, Antonios G.
Kanaras, David A. Kilcoyne, Mark Le Gros, Yadong Yin, A.
Paul Alivisatos and Carolyn A. Larabell, TiO2 nanoparticles
as a soft X-ray molecular probe, Chem. Commun. (Cambridge, U. K.), 2471-2473 (2008).
T. Pellegrino, R. A. Sperling, A. P. Alivisatos and W. J.
Parak, Gel electrophoresis of gold-DNA nanoconjugates, J
Biomedicine and Biotechnology, 207, 26796 (2008).
Jonathan S. Owen, Jungwon Park, Paul-Emile Trudeau and
A. Paul Alivisatos, Reaction Chemistry and Ligand Exchange at Cadmium-Selenide Nanocrystal Surfaces, J. Am.
Chem. Soc, 130, 12279-12281 (2008).
Elena V. Shevchenko, Moritz Ringler, Alexander Schwemer, Dmitri V. Talapin, Thomas A. Klar, Andrey L. Rogach,
Jochen Feldmann and A. Paul Alivisatos, Self-Assembled Binary Superlattices of CdSe and Au Nanocrystals and Their
Fluorescence Properties, J. Am. Chem. Soc, 130, 3274-3275
(2008).
Shelley A. Claridge, Alexander J. Mastroianni, Yeung B.
Au, Huiyang W. Liang, Christine M. Micheel, Jean M. J.
Frechet and A. Paul Alivisatos, Enzymatic Ligation Creates
Discrete Multinanoparticle Building Blocks for Self-Assembly, J. Am. Chem. Soc, 130, 9598-9605 (2008).
Charina L. Choi, Shelley A. Claridge, Ethan C. Garner, A.
Paul Alivisatos and R. Dyche Mullins, Protein-Nanocrystal
Conjugates Support a Single Filament Polymerization Model
in R1 Plasmid Segregation, J. Biol. Chem, 283, 28081-28086
(2008).
C. M. Micheel, D. Zanchet and A. Paul Alivisatos, Correlation Analysis of TEM Images of Nanocrystal Molecules,
Langmuir, 24, 10084-10088 (2008).
Shelley A. Claridge, Huiyang W. Liang, S. Roger Basu,
Jean M. J. Frechet and A. Paul Alivisatos, Isolation of Discrete Nanoparticle-DNA Conjugates for Plasmonic Applications, Nano Lett, 8, 1202-1206 (2008).
Paul-Emile Trudeau, Matt Sheldon, Virginia Altoe and A.
Paul Alivisatos, Electrical Contacts to Individual Colloidal
Semiconductor Nanorods, Nano Lett, 8, 1936-1939 (2008).
Yue Wu, Cyrus Wadia, Wanli Ma, Bryce Sadtler and A.
Paul Alivisatos, Synthesis and Photovoltaic Application of
Copper(I) Sulfide Nanocrystals, Nano Lett, 8, 2551-2555
(2008).
K. J. Koski, N. M. Kamp, R. K. Smith, M. Kunz, J. K.
Knight and A. P. Alivisatos, Structural distortions in 5-10 nm
silver nanoparticles under high pressure, Phys. Rev. B, 78,
165410-165420 (2008).
ANDERSEN, RICHARD ALLAN (b.1942) Professor. B.A, 1965, University of South Dakota; Ph.D, 1973,
University of Wyoming. Postdoctoral Fellow, 19741976, London University, Imperial College, London, England. Inorganic Chemistry; Organometallic Chemistry.
Synthetic inorganic and organometallic chemistry of dand f-transition, and main-group metals; particularly
those with metal to carbon, oxygen, nitrogen, and hydrogen bonds. TEL: (510) 642-4452 FAX: (510) 642-8369
Email: raandersen@lbl.gov
No publication information submitted for this edition.
ARNOLD, JOHN (b.1959) Professor. B.S, 1982, Salford University, UK; Ph.D, 1986, University of California, San Diego. Postdoctoral Fellowship, 1987-1988,
London University, Imperial College, London; Royal Society University Research Fellow, 1988-1989, London
University, Imperial College, London. Inorganic Chemistry; Materials Chemistry. Inorganic and organometallic
chemistry with transition, lanthanide and main group elements; homogeneous catalysis; materials and polymer
chemistry. TEL: (510) 643-5181 FAX: (510) 643-5181
Web: www.cchem.berkeley.edu/~jagrp/
Email: arnold@berkeley.edu
J. L. Krinsky, L. L. Anderson, J. Arnold and R. G. Berg-
1
man, A new class of metal-imido complex: Synthesis and
properties of oxygen-centered tetradecaimido hexatantalum
clusters, Angew. Chem, Intl. Ed, 46, 369-372 (2007).
Jamin L. Krinsky, Laura L. Anderson, John Arnold and
Robert G. Bergman, Synthesis and properties of oxygen-centered tetradecaimido hexatantalum clusters, Angew. Chem.,
Int. Ed, 46, 369-372 (2007).
Wayne A. Chomitz and John Arnold, Transition metal dinitrogen complexes supported by a versatile monoanionic
[N2P2] ligand, Chem. Commun. (Cambridge, U. K.), 47974799 (2007).
Wayne A. Chomitz, Stefan G. Minasian, Andrew D. Sutton
and John Arnold, Synthesis and Reactivity of Metal Complexes Supported by the Tetradentate Monoanionic Ligand
Bis(2-picolyl)(2-hydroxy-3,5-di-tert-butylbenzyl)amide
(BPPA), Inorg. Chem. (Washington, DC, U. S.), 46, 71997209 (2007).
Jamin L. Krinsky, John Arnold and Robert G. Bergman,
Platinum Group Thiophenoxyimine Complexes: Syntheses
and Crystallographic/Computational Studies, Organometallics, 26, 897-909 (2007).
Martin Mulvihill, Andrea Tao, Kanokraj Benjauthrit, John
Arnold and Peidong Yang, Surface-enhanced Raman spectroscopy for trace arsenic detection in contaminated water,
Angew. Chem., Int. Ed, 47, 6456-6460 (2008).
Wayne A. Chomitz and John Arnold, Reactivity of a Co(I)
[N2P2] complex with azides: evidence for a transient Co(III)
imido species, Chem. Commun. (Cambridge, U. K.), 36483650 (2008).
Stefan G. Minasian and John Arnold, Synthesis and reactivity of bis-pentamethylcyclopentadienyl diiododialane
(Cp*AlI)2: an aluminium(II) precursor to (Cp*Al)4, Chem.
Commun. (Cambridge, U. K.), 4043-4045 (2008).
John Arnold, Dalton Discussion 11: The renaissance of
main group chemistry, Dalton Trans, 4334-4335 (2008).
Jamin L. Krinsky, Laura L. Anderson, John Arnold and
Robert G. Bergman, Oxygen-Centered Hexatantalum Tetradecaimido Cluster Complexes, Inorg. Chem. (Washington,
DC, U. S.), 47, 1053-1066 (2008).
Wayne A. Chomitz, Seth F. Mickenberg and John Arnold,
First-Row Transition Metal-Halide Complexes Supported by
a Monoanionic [N2P2] Ligand, Inorg. Chem. (Washington,
DC, U. S.), 47, 373-380 (2008).
Stefan G. Minasian, Jamin L. Krinsky, Valerie A. Williams
and John Arnold, A Heterobimetallic Complex With an Unsupported Uranium(III)-Aluminum(I) Bond: (CpSiMe3)3UAlCp* (Cp* = C5Me5), J. Am. Chem. Soc, 130, 10086-10087
(2008).
Neil C. Tomson, Andrew Yan, John Arnold and Robert G.
Bergman, An Unusually Diverse Array of Products Formed
upon Carbonylation of a Dialkylniobium Complex, J. Am.
Chem. Soc, 130, 11262-11263 (2008).
Rong Fan, Seong Huh, Ruoxue Yan, John Arnold and Peidong Yang, Gated proton transport in aligned mesoporous silica films, Nat. Mater, 7, 303-307 (2008).
BARTLETT, NEIL (b.1932) Emeritus Professor of
Chemistry. B.Sc, 1954, King’s Coll., U. of Durham;
Ph.D, 1958, King’s Coll., U. of Durham. Inorganic solid
state, noble-gas and fluorine chemistry with particular interest in structural aspects of novel materials with elements in unusual oxidation states or bonding arrangements. TEL: (925) 254-7342 FAX: (510) 486-6033
Email: n-bart@cchem.berkeley.edu
NBartlett@lbl.gov
No publication information submitted for this edition.
BARTLETT, PAUL ALLAN (b.1948) Professor Emeritus. A.B, 1969, Harvard University; A.M, 1969, Harvard University; Ph.D, 1972, Stanford University. NIH
Fellowship, 1972-1973, University of California, San
Diego. Bioorganic Chemistry; Medicinal and/or Pharmaceutical Chemistry. TEL: (510) 642-1259
Web: www.cchem.berkeley.edu/~pabgrp
Email: paul_bartlett@berkeley.edu
No publication information submitted for this edition.
BERGMAN, ROBERT GEORGE (b.1942) Professor. B.A, 1963, Carleton College; Ph.D, 1966, University
of Wisconsin. NATO Postdoctoral Fellow, 1966-1967,
Columbia University. Organic Chemistry; Organometallic Chemistry. Organometallic synthesis and reaction
mechanisms, homogeneous catalysis, alkane activation
and functionalization, application of organometallic
chemistry to organic and enantioselective synthesis.
TEL: (510) 642-2156 FAX: (510) 642-7714
Web: www.cchem.berkeley.edu/~rgbgrp
Email: rbergman@berkeley.edu
J. L. Krinsky, L. L. Anderson, J. Arnold and R. G. Bergman, Synthesis and properties of oxygen-centered tetradecaimido hexatantalum clusters, Angew. Chem. Int. Ed, 46,
369-372 (2007).
H. M. Hoyt and R. G. Bergman, Kinetic control and multiple mechanisms for C-H bond activation by a Zr=N complex,
Angew. Chem. Int. Ed, 46, 5580-5582 (2007).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Catalytic
deprotection of acetals in strongly basic solution using a self-
2
CALIFORNIA, BERKELEY
assembled supramolecular “nanozyme”, Angew. Chem. Int.
Ed, 46, 8587-8589 (2007).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Making
amines strong bases: Thermodynamic stabilization of protonated guests in a highly-charged supramolecular host, J. Am.
Chem. Soc, 129, 11459-11467 (2007).
S. M. Biros, R. G. Bergman and K. N. Raymond, The hydrophobic effect drives the recognition of hydrocarbons by
an anionic metal-ligand cluster, J. Am. Chem. Soc, 129,
12094-12095 (2007).
R. J. Fox, G. Lalic and R. G. Bergman, Regio- and stereospecific formation of protected allylic alcohols via zirconium-mediated SN2’ substitution of allylic chlorides, J. Am.
Chem. Soc, 129, 14144-14145 (2007).
K. A. Nolin, J. R. Krumper, M. D. Pluth, R. G. Bergman
and F. D. Toste, Analysis of an unprecedented mechanism
for the catalytic hydrosilylation of carbonyl compounds, J.
Am. Chem. Soc, 129, 14684-14696 (2007).
V. S. Chan, R. G. Bergman and F. D. Toste, Pd-catalyzed
dynamic kinetic enantioselective arylation of silylphosphines, J. Am. Chem. Soc, 129, 15122-15123 (2007).
D. H. Leung, R. G. Bergman and K. N. Raymond, Highly
selective supramolecular catalyzed allylic alcohol isomerization, J. Am. Chem. Soc, 129, 2746-2747 (2007).
S. Wiedemann, D. H. Kang, R. G. Bergman and C. M.
Friend, Cyclopropylmethyl/cyclobutyl rearrangements on
surfaces: Evidence for transient cation formation near O-covered Mo(110), J. Am. Chem. Soc, 129, 4666-4677 (2007).
J. C. Rech, M. Yato, D. Duckett, B. Ember, P. V. LoGrasso, R. G. Bergman and J. A. Ellman, Synthesis of potent bicyclic bisarylimidazole c-Jun N-terminal kinase inhibitors by
catalytic C-H bond activation, J. Am. Chem. Soc, 129, 490491 (2007).
M. P. Watson, L. E. Overman and R. G. Bergman, Kinetic
and computational analysis of the palladium(II)-catalyzed
asymmetric allylic trichloroacetimidate rearrangement: Development of a model for enantioselectivity, J. Am. Chem.
Soc, 129, 5031-5044 (2007).
J. C. Lewis, R. G. Bergman and J. A. Ellman, Rh(I)-catalyzed alkylation of quinolines and pyridines via C-H bond
activation, J. Am. Chem. Soc, 129, 5332-5333 (2007).
M. R. Anstey, C. M. Yung, J. Du and R. G. Bergman,
Unexpected C-C bond cleavage and C-C bond formation observed in the reaction of a cationic iridium complex with heteratom-substituted cyclopropanes, J. Am. Chem. Soc, 129,
776-777 (2007).
R. G. Bergman, C-H activation, Nature, 446, 391-393
(2007).
J. L. Krinsky, J. Arnold and R. G. Bergman, Platinum
group thiophenoxyimine complexes: Syntheses and crystallographic/computational studies, Organometallics, 26, 897-909
(2007).
E. A. Cobar, R. Z. Khaliullin, R. G. Bergman and M.
Head-Gordon, Theoretical study of the rhenium-alkane interaction in transition metal-alkane s-complexes, PNAS, 104,
6963-6968 (2007).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Acid catalysis in basic solution: A supramolecular host promotes orthoformate hydrolysis, Science, 316, 85-88 (2007).
A. Watzke, R. M. Wilson, S. J. O’Malley, R. G. Bergman
and J. A. Ellman, Asymmetric intramolecular alkylation of
chiral aromatic imines via catalytic C-H bond activation,
Synlett, 15, 2383-2389 (2007).
J. C. Lewis, R. G. Bergman and J. A. Ellman, Direct functionalization of nitrogen heterocycles via Rh-catalyzed C-H
bond activation, Acct. Chem. Res, 41, 1013-1025 (2008).
M. Chiu, H. M. Hoyt, F. E. Michael, Herman van Halbeek
and R. G. Bergman, Synthesis, structural characterization,
and quantitative basicity studies of lithium zirconimidate
complexes, Angew. Chem. Int. Ed, 47, 6073-6076 (2008).
L. M. Bishop, J. E. Barbarow, R. G. Bergman and D.
Trauner, Catalysis of a 6p electrocyclization, Angew. Chem.
Int. Ed, 47, 8100-8103 (2008).
L. M. Bishop, M. Winkler, K. N. Houk, R. G. Bergman
and D. Trauner, Mechanistic investigations into the acid-catalyzed cyclization of a vinyl ortho-quinone methides, Chem.
Eur. J, 14, 5405-5408 (2008).
J. L. Krinsky, L. L. Anderson, J. Arnold and R. G. Bergman, Oxygen-centered hexatantalum tetradecaimido cluster
complexes, Inorg. Chem, 47, 1053-1066 (2008).
C. J. Hastings, D. Fiedler, R. G. Bergman and K. N. Raymond, Aza cope rearrangement of propargyl enammonium
cations catalyzed by a self-assembled “nanozyme”, J. Am.
Chem. Soc, 130, 10977-10983 (2008).
N. C. Tomson, A. Yan, J. Arnold and R. G. Bergman, An
unusally diverse array of products formed upon carbonylation of a dialkylniobium complex, J. Am. Chem. Soc, 130,
11262-11263 (2008).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Supramolecular catalysis of orthoformate hydrolysis in basic solution: An enzyme-like mechanism, J. Am. Chem. Soc, 130,
11423-11429 (2008).
A. Berman, J. C. Lewis, R. G. Bergman and J. A. Ellman,
Rh(I)-catalyzed direct arylation of pyridines and quinolines,
J. Am. Chem. Soc, 130, 14926-14927 (2008).
S. E. Smith, J. M. Sasaki, R. G. Bergman, J. E. Mondloch
and R. G. Finke, Platinum catalyzed phenyl and methyl
group transfer from tin to iridium: Evidence for an autocatalytic reaction pathway with an unusual preference for methyl
transfer, J. Am. Chem. Soc, 130, 1839-1841 (2008).
S. Yotphan, R. G. Bergman and J. A. Ellman, The stereo-
selective formation of bicyclic enamines with bridgehead unsaturation via tandem C-H bond activation/alkenylation/
electrocyclization, J. Am. Chem. Soc, 130, 2452-2453 (2008).
J. C. Lewis, A. M. Berman, R. G. Bergman and J. A. Ellman, Rh(I)-catalyzed arylation of hetorocycles via C-H bond
activation: Expanded scope through mechanistic insight, J.
Am. Chem. Soc, 130, 2493-2500 (2008).
D. H. Leung, R. G. Bergman and K. N. Raymond, Enthalpy-entropy compensation reveals solvent reorganization as a
driving force for supramolecular encapsulation of water, J.
Am. Chem. Soc, 130, 2798-2805 (2008).
D. A. Colby, R. G. Bergman and J. A. Ellman, Synthesis of
dihydropyridines and pyridines from imines and alkynes via
C-H activation, J. Am. Chem. Soc, 130, 3645-3651 (2008).
J. M. Schomaker, W. C. Boyd, I. C. Stewart, F. D. Toste
and R. G. Bergman, Cobalt dinitrosoalkane complexes in the
C-H functionalization of olefins, J. Am. Chem. Soc, 130,
3777-3779 (2008).
G. Lalic, J. L. Krinsky and R. G. Bergman, Scope and the
mechanism of SN2’ substitution reactions of a monomeric
imidozirconium complex with allylic electrophiles, J. Am.
Chem. Soc, 130, 4459-4465 (2008).
A. S. Tsai, R. G. Bergman and J. A. Ellman, Asymmetric
synthesis of (–)-incarvillateine employing an intramolecular
alkylation via Rh-catalyzed olefinic C–H bond activation, J.
Am. Chem. Soc, 130, 6316-6317 (2008).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Encapsulation of protonated diamines in a water-soluble chiral, supramolecular assembly allows for measurement of hydrogenbond breaking followed by nitrogen inversion/rotation
(NIR)1, J. Am. Chem. Soc, 130, 6362-6366 (2008).
H. Harada, R. K. Thalji, R. G. Bergman and J. A. Ellman,
Enantioselective intramolecular hydroarylation of alkenes via
directed C-H bond activation, J. Org. Chem, 73, 6772-6779
(2008).
M. D. Pluth, R. G. Bergman and K. N. Raymond, Acceleration of amide bond rotation by encapsulation in the hydrophobic interior of a water-soluble supramolecular assembly,
J. Org. Chem, 73, 7132-7136 (2008).
A. Razgon, R. G. Bergman and C. N. Sukenik, Ozonolysisbased route to the in situ formation of aldehyde-bearing selfassembled monolayer surfaces, Langmuir, 24, 2545-2552
(2008).
M. W. Gribble, J. A. Ellman and R. G. Bergman, Synthesis
of a benzodiazepine-derived rhodium NHC complex by C-H
bond activation, Organometallics, 27, 2152-2155 (2008).
C. J. Hastings, M. D. Pluth, S. M. Biros, R. G. Bergman
and K. N. Raymond, Simultaneously bound guests and chiral
recognition: A chiral self-assembled supramolecular host encapsulates hydrophobic guests, Tetrahedron, 64, 8362-8367
(2008).
Dennis H. Leung, Inorganic synthesis organometallic reactions group theory. (D)
Helen M. Hoyt, Selective carbon-hydrogen bond activation
of unfunctionalized hydrocarbons with substituted zirconocene imido complexes. (D)
Ian C. Stewart, Synthesis, reactivity and catalytic applications of ruthenium phosphido complexes. (D)
Jamin L. Krinsky, Metal-heteroatom bonding: New transition-metal compounds with relevance to catalysis. (D)
Jared C. Lewis, Discovery, optimization, and mechansims
of new transformations proceeding via catalytic carbon-hydrogen bond activation. (D)
Rebecca M. Wilson, Asymmetric cyclization of nitrogencontaining heterocycles via catalytic C-H bond activation.
(D)
Stuart E. Smith, I. Synthesis and reactivity of chiral iridium(III) and rhodium(III) complexes. II. Platinum-catalyzed
Ir-methyl and Ir-phenyl bond formation. (D)
Vincent S. Chan, Development of transition metal-catalyzed methods for the enantioselective synthesis of P-stereogenic phosphines. (D)
BERTOZZI, CAROLYN RUTH (b.1966) Professor.
A.B, 1988, Harvard University; Ph.D, 1993, University
of California, Berkeley. American Cancer Society Fellowship, 1993-1995, University of California, San Francisco. Chemical Biology. Applications of chemical tools
to the study of cellular processes relevant to human disease. TEL: (510) 643-1682 FAX: (510) 643-2628
Web: www.cchem.berkeley.edu/crbgrp/
Email: crb@berkeley.edu
P. Wu, X. Chen, N. Hu, U. C. Tam, O. Blixt and A. Zettl,
Biocompatible carbon nanotubes generated by functionalization with glycodendrimers, Angew. Chem. Int. Ed, 47, 50225025 (2007).
T. L. Leavy and C. R. Bertozzi, A high-throughput assay
for O-GlcNAc transferase detects primary sequence preferences in peptide substrates, Bioorg. Med. Chem. Lett, 7,
3851-3854 (2007).
M. Veiseh, O. Veiseh, M. C. Martin, C. R. Bertozzi and M.
Zhang, Single-cell-based sensors and synchrotron FTIR spectroscopy: A hybrid system towards bacterial detection, Biosens. Bioelectron, 23, 253-260 (2007).
M. A. Kostiuk, M. M. Corvi, B. O. Keller, G. Plummer, J.
A. Prescher, M. J. Hangauer, C. R. Bertozzi, G. Rajaiah, J. R.
Falck and L. G. Berthiaume, Identification of palmitoylated
mitochondrial proteins using a bio-orthogonal azido-palmitate analogue, FASEB J, 22, 721-732 (2007).
D. D. Martin, G. L. Vilas, J. A. Prescher, G. Rajaiah, J. R.
Falck, C. R. Bertozzi and L. G. Berthiaume, Rapid detection,
discovery, and identification of post-translationally myristoylated proteins during apoptosis using a bio-orthogonal azidomyristate analog, FASEB J, 22, 797-806 (2007).
M. G. Paulick, A. R. Wise, M. B. Forstner, J. T. Groves
and C. R. Bertozzi, Synthetic analogues of glycosylphosphatidylinositol-anchored proteins and their behavior in supported lipid bilayers, J. Am. Chem. Soc, 129, 11543-11550
(2007).
F. L. Lin, H. van Halbeek and C. R. Bertozzi, Synthesis of
mono- and dideoxygenated a,a-trehalose analogs, J. Am.
Chem. Soc, 242, 2014-2030 (2007).
D. Rabuka, R. Parthasarathy, G. S. Lee, X. Chen, J. T.
Groves and C. R. Bertozzi, Hierarchical assembly of model
cell surfaces: Synthesis of mucin mimetic polymers and their
display on supported bilayers, J. Am. Chem. Soc, 129, 54625471 (2007).
P. V. Chang, J. A. Prescher, M. J. Hangauer and C. R. Bertozzi, Imaging cell surface glycans with bioorthogonal chemical reporters, J. Am. Chem. Soc, 129, 8400-8401 (2007).
H. Gao, J. Leary, K. S. Carroll, C. R. Bertozzi and H.
Chen, Noncovalent complexes of APS reductase from M. tuberculosis: Delineating a mechanistic model using ESIFTICR MS, J. Am. Soc. Mass Spectrom, 18, 167-178 (2007).
R. H. Senaratne, J. D. Mougous, J. R. Reader, S. J. Williams, T. Zhang, C. R. Bertozzi and L. W. Riley, Vaccine efficacy of attenuated but persistent mycobacterium tuberculosis cysH mutant, J. Med. Microbiol, 56, 454-458 (2007).
R. Parthasarathy, D. Rabuka, C. Bertozzi and J. T. Groves,
Molecular orientation of membrane-anchored mucin glycoprotein mimics, J. Phys. Chem. B, 111, 112133-12135
(2007).
E. S. Douglas, R. A. Chandra, C. R. Bertozzi, R. A. Mathies and M. B. Francis, Self-assembled cellular microarrays
patterned using DNA barcodes, Lab Chip, 7, 1442-1448
(2007).
M. Fernández-Suárez, H. Baruah, L. Martínez-Hernández,
K. T. Xie, J. M. Baskin, C. R. Bertozzi and A. Y. Ting, Redirecting lipoic acid ligase for cell surface protein labeling with
small-molecule probes, Nat. Biotechnol, 25, 1483-1487
(2007).
I. S. Carrico, B. L. Carlson and C. R. Bertozzi, Introducing
genetically encoded aldehydes into proteins, Nature Chem.
Biol, 3, 321-322 (2007).
S. T. Laughlin and C. R. Bertozzi, Metabolic labeling of
glycans with azido sugars and subsequent glycan-profiling
and visualization via Staudinger ligation, Nature Protocols,
11, 2930-2944 (2007).
P. Kumar, M. W. Schelle, M. Jain, F. L. Lin, C. J. Petzold,
M. D. Leavell, J. A. Leary, J. S. Cox and C. R. Bertozzi,
PapA1 and PapA2 are acyltransferases essential for the biosynthesis of the mycobacterium tuberculosis virulence factor
sulfolipid-1, Proc. Natl. Acad. Sci. U.S.A, 104, 11221-11226
(2007).
M. G. Paulick, M. B. Forstner, J. T. Groves and C. R. Bertozzi, A chemical approach toward unravelling the biological
function of the glycosylphosphatidylinositol anchor, Proc.
Natl. Acad. Sci. U.S.A, 104, 20332-20337 (2007).
M. Jain, C. J. Petzold, M. W. Schelle, M. D. Leavell, J. D.
Mougous, C. R. Bertozzi, J. A. Leary and J. S. Cox, Lipidomics reveals control of mycobacterium tuberculosis virulence lipids via metabolic coupling, Proc. Natl. Acad. Sci.
U.S.A, 104, 5133-5138 (2007).
X. Chen, A. Kis, Z. Zettl and C. R. Bertozzi, A cell nanoinjector based on carbon nanotubes, Proc. Natl. Acad. Sci.
U.S.A, 104, 8218-8222 (2007).
J. M. Baskin and C. R. Bertozzi, Bioorthogonal click
chemistry: Covalent labeling in living systems, QSAR Comb.
Sci, 26, 1211-1219 (2007).
C. M. Holsclaw, K. M. Sogi, S. A. Gilmore, M. W.
Schelle, M. D. Leavell, C. R. Bertozzi and J. A. Leary, Structural characterization of a novel sulfated menaquinone produced by stf3 from mycobacterium tuberculosis, ACS Chem.
Biol, 3, 619-624 (2008).
S. C. Hsiao, A. K. Crow, W. A. Lam, C. R. Bertozzi, D. A.
Fletcher and M. B. Francis, DNA-coated AFM cantilevers
for the investigation of cell adhesion and the patterning of
live cells, Angew. Chem. Int. Ed, 47, 8473-8477 (2008).
S. K. Hatzios, A. T. Iavarone and C. R. Bertozzi, Rv2131c
from mycobacterium tuberculosis is a CysQ 3’-Phosphoadenosine-5’-phosphatase, Biochemistry, 47, 5823-5831 (2008).
M. G. Paulick and C. R. Bertozzi, The glycosylphosphatidylinositol (GPI) anchor: A complex membrane-anchoring
structure for proteins, Biochemistry, 47, 6991-7000 (2008).
C. W. Harland, D. Rabuka, C. R. Bertozzi and R. Parthasarathy, The M. tuberculosis virulence factor trehalose dimycolate imparts desiccation resistance to model mycobacterial
membranes, Biophys, 94, 4718-4724 (2008).
J. J. Johnson, J. M. Baskin, C. R. Bertozzi and N. J. Turro,
Copper-free click chemistry for the in situ crosslinking of
photodegradable star polymers, Chem. Commun, 14, 30643066 (2008).
J. A. Codelli, J. M. Baskin, N. J. Agard and C. R. Bertozzi,
Second-generation difluorinated cyclooctynes for copper-free
click chemistry, J. Am. Chem. Soc, 130, 11486-11493 (2008).
J. S. Rush and C. R. Bertozzi, New aldehyde tag sequences
identified by screening formylglycine generating enzymes in
vitro and in vivo, J. Am. Chem. Soc, 130, 12240-12241
(2008).
J. L. Czlapinski, M. W. Schelle, L. W. Miller, S. T. Laugh-
CALIFORNIA, BERKELEY
lin, J. J. Kohler, V. W. Cornish and C. R. Bertozzi, Conditional glycosylation in eukaryotic cells using a biocompatible
chemical inducer of dimerization, J. Am. Chem. Soc, 130,
13186-13187 (2008).
R. Jasti, J. Bhattacharjee, J. B. Neaton and C. R. Bertozzi,
Synthesis, characterization, and theory of [9]-, [12]-, and [18]
cycloparaphenylene: Carbon nanohoop structures, J. Am.
Chem. Soc, 130, 17646-17647 (2008).
D. Rabuka, M. B. Forstner, J. T. Groves and C. R. Bertozzi, Non-covalent cell surface engineering: Incorporation of
bioactive synthetic glycopolymers into cellular membranes,
J. Am. Chem. Soc, 130, 5947-5953 (2008).
B. L. Carlson, E. R. Ballister, E. Skordalakes, D. S. King,
M. A. Breidenbach, S. A. Gilmore, J. M. Berger and C. R.
Bertozzi, Function and structure of a prokaryotic formylglycine generating enzyme, J. Biol. Chem, 283, 20117-20125
(2008).
J. Song, T. Xu, E. Filion, A. P. Saiz, A. P. Tomsia, J. B.
Lian, G. S. Stein, D. C. Ayers and C. R. Bertozzi, Elastomeric high-mineral content hydrogel-hydroxyapatite composites
for orthopedic applications, J. Biomed. Mater. Res. A, June
10 online Epub (2008).
P. M. Drake, J. K. Nathan, C. M. Stock, P. V. Chang, M.
O. Muench, D. Nakata, J. R. Reader, P. Gip, K. P. K. Golden,
B. Weinhold, R. Gerardy-Schahn, F. A. Troy and C. R. Bertozzi, Polysialic acid, a glycan with highly restricted expression, is found on human and murine leukocytes and modulates immune responses, J. Immunol, 181, 6850-6858 (2008).
C. D. Leigh and C. R. Bertozzi, Synthetic studies toward
mycobacterium tuberculosis sulfolipid-1, J. Org. Chem, 73,
1008-1017 (2008).
M. J. Hangauer and C. R. Bertozzi, A FRET-based fluorogenic phosphine for live cell imaging with the staudinger ligation, J. Org. Chem, 47, 2394-2397 (2008).
W. Shui, S. A. Gilmore, L. Sheu, J. Liu, J. D. Keasling and
C. R. Bertozzi, Quantitative proteomic profiling of hostpathogen interactions: The macrophage response to mycobacterium tuberculosis lipids, J. Proteome Res, 8, 282-289
(2008).
E. M. Sletten and C. R. Bertozzi, A hydrophilic azacyclooctyne for copper-free click chemistry, Org. Lett, 10, 30973099 (2008).
S. T. Laughlin and C. R. Bertozzi, Imaging the glycome,
Proc. Natl. Acad. Sci. U.S.A, 106, 12-17 (2008).
W. Shui, L. Sheu, J. Liu, B. Smart, C. J. Petzold, T. Hsieh,
A. Pitcher, J. D. Keasling and C. R. Bertozzi, Membrane proteomics of phagosomes suggests a connection to autophagy,
Proc. Natl. Acad. Sci. U.S.A, 105, 16952-16957 (2008).
N. M. Toriello, E. S. Douglas, N. Thaitrong, S. C. Hsiao,
M. B. Francis, C. R. Bertozzi and R. A. Mathies, Integrated
microfluidic bioprocessor for single-cell gene expression
analysis, Proc. Natl. Acad. Sci. U.S.A, 105, 20173-20178
(2008).
S. T. Laughlin, J. M. Baskin, S. L. Amacher and C. R. Bertozzi, In vivo imaging of membrane-associated glycans in developing zebrafish, Science, 320, 664-667 (2008).
Brian Lee Carlson, Investigating prokaryotic sulfatase regulation and the development of aldehyde-tag-technology. (D)
David I. Rabuka, Developing chemical tools for the study
of glycoproteins. (D)
Michael William Schelle, The contribution of sulfated metabolites to mycobacterial pathogenesis. (D)
Nicholas John Agard, Small molecule tools for probing
glycosylation. (D)
Peter J. Woodruff, Trehalose metabolism in mycobacterium smegmatis. (D)
Ravi Chandra, Programmable cell adhesion encoded by
DNA hybridization. (D)
Scott T. Laughlin, Chemical approaches to imaging glycans in living animals. (D)
Tanya Margaret Leavy, Development of chemical approaches to study O-GlcNAc glycosylation. (D)
Xing Chen, Nanotechnologies and chemical tools for cell
biology. (D)
BOERING, KRISTIE A. (b.1963) Associate Professor. B.A, 1985, University of California, San Diego;
Ph.D, 1992, Stanford University. U. S. DOE Global
Change Distinguished Postdoctoral Fellow, 1992-1994,
Harvard University; Bunting Institute Science Scholar,
1995-1996, Radcliffe College; Research Associate,
1995-1998, Harvard University. Atmospheric Chemistry;
Physical Chemistry. Physical chemistry of isotope effects in atmospheric reactions; atmospheric measurements from aircraft & balloon platforms; atmospheric
modeling; planetary photochemistry. TEL: (510) 6423472 FAX: (510) 643-2156
Web: chem.berkeley.edu/people/faculty/boering/
boering.html
Email: boering@berkeley.edu
Publication list has not been verified by the department.
Annalise L. Van Wyngarden, Kathleen A. Mar, Kristie A.
Boering, Jim J. Lin, Yuan T. Lee, Shi-Ying Lin, Hua Guo
and Gyorgy Lendvay, Nonstatistical Behavior of Reactive
Scattering in the 18O+32O2 Isotope Exchange Reaction, J. Am.
Chem. Soc, 129, 2866-2870 (2007).
BUSTAMANTE, CARLOS J. (b.1951) Professor.
B.S, 1973, Univeridad San Marcos, Lima, Peru; M.S,
1975, Univeridad San Marcos, Lima, Peru; Ph.D, 1981,
U. C. Berkeley. Postdoctoral Fellow, 1981-1982, Lawrence Berkeley National Laboratory. Biophysics/Biophysical Chemistry. DNA-binding molecular motors and
Protein and RNA folding studies using methods of single
molecule manipulation. TEL: (510) 643-9706 FAX:
(510) 643-3860
Web: alice.berkeley.edu
Email: carlos@alice.berkeley.edu
No publication information submitted for this edition.
CATE, JAMIE H. D. (b.1968) Assistant Professor.
B.S, 1990, University of Denver; M.S, 1994, University
of Colorado; Ph.D, 1997, Yale University. Damon Runyon-Walter Winchell Postdoctoral Fellow, 1997-1999,
University of California, Santa Cruz. Chemical Biology.
Structure and function of the bacterial ribosome. Regulation of mammalian translation. TEL: (510) 486-4033
FAX: (510) 486-6240
Web: www.chem.berkeley.edu/people/faculty/cate/cate.
html
Email: jcate@lbl.gov
Publication list has not been verified by the department.
Maria A. Borovinskaya, Shinichiro Shoji, James M. Holton, Kurt Fredrick and Jamie H. D. Cate, A steric block in
translation caused by the antibiotic spectinomycin, ACS
Chem. Biol, 2, 545-552 (2007).
Veysel Berk and Jamie H. D. Cate, Insights into protein
biosynthesis from structures of bacterial ribosomes, Curr.
Opin. Struct. Biol, 17, 302-309 (2007).
Raj D. Pai, Wen Zhang, Barbara S. Schuwirth, Go Hirokawa, Hideko Kaji, Akira Kaji and Jamie H. D. Cate, Structural
Insights into Ribosome Recycling Factor Interactions with
the 70S Ribosome, J. Mol. Biol, 376, 1334-1347 (2008).
CERNY, JOSEPH (b.1936) Professor. B.S, 1957, University of Mississippi; Ph.D, 1961, University of Calif.,
Berkeley; Ph.D.h.c, 1990, University of Jyvaskyla, Finland. Nuclear Chemistry. Nuclear reactions with radioactive beams. Decays of proton-rich light nuclei. TEL:
(510) 486-7852 FAX: (510) 486-7983
Email: jcerny@berkeley.edu
Publication list has not been verified by the department.
D. W. Lee, K. Perajarvi, J. Powell, J. P. O’Neil, D. M.
Moltz, V. Z. Goldberg and Joseph Cerny, Low-lying resonant states in 16F using a 15O radioactive ion beam, Phys.
Rev. C: Nucl. Phys, 76, 024314/1-024314/8 (2007).
CHANDLER, DAVID (b.1944) Professor. B.S, 1966,
M.I.T; Ph.D, 1969, Harvard University. Postdoctoral Research Chemist, 1969, University of California, San Diego. Physical Chemistry; Theoretical Chemistry. Statistical mechanics and quantum theory; structure, dynamics
and assembly in complex systems including liquids,
glasses and polymers; biophysics. TEL: (510) 643-6821
FAX: (510) 643-1566
Web: www.gold.cchem.berkeley.edu
Email: chandler@cchem.berkeley.edu
Publication list has not been verified by the department.
Sonja Bouwer, Dora Angelicheva, David Chandler, Pavel
Seeman, Ivailo Tournev and Luba Kalaydjieva, Carrier Rates
of the Ancestral Indian W24X Mutation in GJB2 in the General Gypsy Population and Individual Subisolates, Genet.
Test, 11, 455-458 (2007).
Lester O. Hedges, Lutz Maibaum, David Chandler and
Juan P. Garrahan, Decoupling of exchange and persistence
times in atomistic models of glass formers, J. Chem. Phys,
127, 211101/1-211101/4 (2007).
Lutz Maibaum and David Chandler, Segue between Favorable and Unfavorable Solvation, J. Phys. Chem. B, 111,
9025-9030 (2007).
Thomas F. Miller, III, Eric Vanden-Eijnden and David
Chandler, Solvent coarse-graining and the string method applied to the hydrophobic collapse of a hydrated chain, Los Alamos Natl. Lab., Prepr. Arch., Condens. Matter, 1-11 (2007).
Lester O. Hedges, Lutz Maibaum, David Chandler and
Juan P. Garrahan, De-coupling of exchange and persistence
times in atomistic models of glass formers, Los Alamos Natl.
Lab., Prepr. Arch., Condens. Matter, 1-4 (2007).
Adam P. Willard and David Chandler, The role of solvent
fluctuations in hydrophobic assembly, Los Alamos Natl.
Lab., Prepr. Arch., Condens. Matter, 1-7 (2007).
Robert L. Jack, Michael F. Hagan and David Chandler,
Fluctuation-dissipation ratios in the dynamics of self-assembly, Los Alamos Natl. Lab., Prepr. Arch., Condens. Matter,
1-8 (2007).
Lutz Maibaum and David Chandler, Segue between favorable and unfavorable solvation, Los Alamos Natl. Lab.,
Prepr. Arch., Condens. Matter, 1-8 (2007).
Robert L. Jack, Michael F. Hagan and David Chandler,
Fluctuation-dissipation ratios in the dynamics of self-assembly, Phys. Rev. E: Stat., Nonlinear, Soft Matter Phys, 76,
021119/1-021119/8 (2007).
Thomas F. Miller, III, Eric Vanden-Eijnden and David
3
Chandler, Solvent coarse-graining and the string method applied to the hydrophobic collapse of a hydrated chain, Proc.
Natl. Acad. Sci. U. S. A, 104, 14559-14564 (2007).
Adam P. Willard, Stewart K. Reed, Paul A. Madden and
David Chandler, Water at an electrochemical interface—a
simulation study, arXiv.org, e-Print Arch., Condens. Matter,
1-29 (2008).
Robert L. Jack, David Kelsey, Juan P. Garrahan and David
Chandler, Negative differential mobility of weakly driven
particles in models of glass formers, arXiv.org, e-Print Arch.,
Condens. Matter, 1-8 (2008).
Adam P. Willard and David Chandler, The Role of Solvent
Fluctuations in Hydrophobic Assembly, J. Phys. Chem. B,
112, 6187-6192 (2008).
Robert L. Jack, David Kelsey, Juan P. Garrahan and David
Chandler, Negative differential mobility of weakly driven
particles in models of glass formers, Phys. Rev. E: Stat., Nonlinear, Soft Matter Phys, 78, 011506/1-011506/9 (2008).
CHANG, CHRISTOPHER J. (b.1974) Associate
Professor & Investigator, Howard Hughes Medical Institute. B.S, 1997, California Institute of Technology; M.S,
1997, California Institute of Technology; Ph.D, 2002,
Massachusetts Institute of Technology. Jane Coffin
Childs Postdoctoral Fellow, 2002-2004, Massachusetts
Institute of Technology. Bioinorganic Chemistry; Chemical Biology. Our program has three major emphases:
neuroscience, immunology, and renewable energy/green
chemistry. Fluorescent sensors and other chemical tools
to probe metal ions and oxidation biology in living systems, with particular interest in the brain and central nervous system. Bioinspired catalysts for energy conversion
chemistry, focusing on first-row transition metal platforms and small-molecule reactivity. TEL: (510) 6424704 FAX: (510) 642-7301
Web: www.cchem.berkeley.edu/cjcgrp/
Email: chrischang@berkeley.edu
S. Yoon, E. W. Miller, Q. He, P. H. Do and C. J. Chang, A
bright and specific fluorescent sensor for mercury in water,
cells, and tissue, Angew. Chem. Int. Ed, (2007).
A. E. Albers, K. A. Rawls and C. J. Chang, Activity-based
fluorescent reporters for monoamine oxidases in living cells,
Chem. Communication, (2007).
E. W. Miller and C. J. Chang, Fluorescent probes for nitric
oxide and hydrogen peroxide in cell signaling, Curr. Opin.
Chem. Biol, (2007).
W. H. Harman and C. J. Chang, N2O activation and oxidation reactivity from a non-heme iron pyrrole platform, J. Am.
Chem. Society, (2007).
E. W. Miller, S. X. Bian and C. J. Chang, A fluorescent
sensor for imaging reversible redox cycles in living cells, J.
Am. Chem. Society, (2007).
E. W. Miller, O. Tulyathan, E. Y. Isacoff and C. J. Chang,
Molecular imaging of hydrogen peroxide produced for cell
signaling, Nat. Chem. Biol, (2007).
D. Srikun, E. W. Miller, D. W. Domaille and C. J. Chang,
An ICT-based approach to ratiometric fluorescence imaging
of hydrogen peroxide produced in living cells, Am. Chem.
Society, (2008).
A. E. Albers, B. C. Dickinson, E. W. Miller and C. J.
Chang, A red-emitting naphthofluorescein-based fluorescent
probe for selective detection of hydrogen peroxide in living
cells, Bioorg. Med. Chem. Lett, (2008).
E. L. Que, D. W. Domaille and C. J. Chang, Metals in neurobiology: Probing their chemistry and biology with molecular imaging, Chem. Rev, (2008).
B. C. Dickinson and C. J. Chang, A targetable fluorescent
probe for imaging hydrogen peroxide in the mitochondria of
living cells, J. Am. Chem. Society, (2008).
D. W. Domaille, E. L. Que and C. J. Chang, Synthetic
fluorescent sensors for studying the cell biology of metals,
Nat. Chem. Biol, (2008).
E. W. Miller, Q. He and C. J. Chang, Preparation and use
of Leadfluor-1, a synthetic fluorophore for live-cell lead imaging, Nature Protocols, (2008).
CHANG, MICHELLE C. Assistant Professor. Biochemistry; Chemical Biology. TEL: (510) 642-8545
FAX: (510) 642-9863
Web: www.cchem.berkeley.edu/mccgrp/
Email: mcchang@berkeley.edu
No publication information submitted for this edition.
COHEN, RONALD CARL (b.1963) Associate Professor. B.A, 1985, Wesleyan University; Ph.D, 1991,
University of California, Berkeley. Postdoctoral Fellowship, 1991-1994, Harvard University; Research Associate, 1994-1995, Harvard University. Atmospheric
Chemistry; Physical Chemistry. Observations of the
composition and chemistry of the Earth’s atmosphere using in situ laser spectroscopies and satellite based spectrometers. Observations of isotope effects of water and
their use as climate diagnostics. Biosphere-atmosphere
interactions coupling the nitrogen and carbon cycles.
TEL: (510) 642-2735 FAX: (510) 643-2156
Web: www.cchem.berkeley.edu/~rccgrp/
Email: cohen@cchem.berkeley.edu
No publication information submitted for this edition.
4
CALIFORNIA, BERKELEY
CONNICK, ROBERT ELWELL (b.1917) Professor
of Chemistry Emeritus. B.S, 1939, University of California, Berkeley; Ph.D, 1942, University of California,
Berkeley. Nuclear magnetic resonance; reaction kinetics;
hydration of metal ions; exchange reactions of ligands on
metal ions; hydrolytic polymerization; ruthenium chemistry; sulfur chemistry; computer modeling of exchange
reactions. TEL: (510) 642-4981 FAX: (510) 642-8369
No publication information submitted for this edition.
DOUDNA, JENNIFER (b.1964) Professor. B.A,
1985, Pomona College; Ph.D, 1989, Harvard University.
Research Fellow, 1989-1991, Harvard Medical School;
Lucille P. Market Scholar, 1991-1994, University of Colorado. Structural Biology. Ribozyme structures and
mechanisms; RNA-mediated translation initiation; role
of RNA in protein export. TEL: (510) 643-0225 FAX:
(510) 643-0080
Web: www.rna.berkeley.edu
Email: doudna@berkeley.edu
No publication information submitted for this edition.
ELLMAN, JONATHAN ANTHONY (b.1962) Professor. B.S, 1984, M.I.T; Ph.D, 1989, Harvard University, Cambridge. NSF Postdoctoral Fellowship, 19891992, University of California, Berkeley. Chemical Biology; Organic Chemistry. Development and application
of practical and general new methods for asymmetric
amine synthesis and catalytic C-H bond functionalization. Development of new chemical tools for the systematic study of enzymes. TEL: (510) 642-4488 FAX: (510)
642-8369
Web: www.cchem.berkeley.edu/jaegrp/index.html
Email: jellman@berkeley.edu
A. W. Patterson, H. M. Peltier, F. Sasse and J. A. Ellman,
Design, synthesis, and biological properties of highly potent
tubulysin D analogues, Chem. Eur. J, 13, 9534-9541 (2007).
Y. T. Rosa-Bauza, F. Berst and J. A. Ellman, Straightforward preparation and assay of aspartyl protease substrates
with an internal thioester linkage, ChemBioChem, 8, 981-984
(2007).
G. L. Liu, Y. T. Rosa-Bauza, T. Salisbury, Y. Lu, J. Kim,
C. Craik, J. A. Ellman, L. P. Lee and F. F. Chen, Peptide-nanocrescent hybrid SERS probe for optical detection of protease activity, J. Nanoscience Nanotech, 7, 2323–2330 (2007).
M. T. Robak, M. Trincado and J. A. Ellman, Enantioselective aza-Henry reaction with an N-sulfinyl urea organocatalyst, J. Am. Chem. Soc, 129, 15110-15111 (2007).
J. C. Rech, M. Yato, D. Duckett, Brian Ember, P. V. LoGrasso, R. G. Bergman and J. A. Ellman, Synthesis of potent
bicyclic bisarylimidazole c-Jun N-terminal kinase inhibitors
by catalytic C-H bond activation, J. Am. Chem. Soc, 129,
490-491 (2007).
J. C. Lewis, R. G. Bergman and J. A. Ellman, Rh(I)-catalyzed alkylation of quinolines and pyridines via C-H bond
activation, J. Am. Chem. Soc, 129, 5332-5333 (2007).
M. B. Soellner, K. A. Rawles, C. Grundner, T. Alber and J.
A. Ellman, Fragment-based substrate activity screening
method for the identification of potent inhibitors of the M. tuberculosis phosphatase PtpB, J. Am. Chem. Soc, 129, 96139615 (2007).
H. Inagaki, H. Tsuruoka, M. Hornsby, S. A. Lesley, G.
Spraggon and J. A. Ellman, Nonpeptidic inhibitors of cathepsin S with an unprecedented binding mode, J. Med. Chem,
50, 2693-2699 (2007).
J. Tanuwidjaja, H. M. Peltier and J. A. Ellman, One-pot
asymmetric synthesis of either diastereomer of tert-butanesulfinyl-protected amines from ketones, J. Org. Chem, 72,
626-629 (2007).
H. Nakagawa, J. C. Rech, R. Sindelar and J. A. Ellman,
Catalytic enantioselective addition of arylboronic acids to NBoc imines generated in situ, Org. Lett, 9, 5155-5157 (2007).
J. A. Ellman, The direct approach, Science, 316, 11311132 (2007).
A. Watzke, R. M. Wilson, S. J. O’Malley, R. G. Bergman
and J. A. Ellman, Asymmetric intramolecular alkylation of
chiral aromatic imines via catalytic C-H bond activation,
Synlett, 2383-2389 (2007).
J. Tanuwidjaja, H. M. Peltier, J. C. Lewis, L. B. Schenkel
and J. A. Ellman, One-pot microwave-promoted synthesis of
nitriles from aldehydes via tert-butanesulfinyl imines, Synthesis, 3385-3389 (2007).
J. C. Lewis, R. G. Bergman and J. A. Ellman, Direct functionalization of nitrogen heterocycles via Rh-catalyzed CH
bond activation, Acc. Chem. Res, 41, 1013-1025 (2008).
M. Trincado and J. A. Ellman, Enantioselective synthesis
of alpha-Aryl alkylamines by Rh-catalyzed addition reactions
of arylboronic acids to aliphatic imines, Angew. Chem. Int.
Ed, 47, 5623-5626 (2008).
M. Drag, J. Mikolajczyk, M. Bekes, F. Reyes-Turcu, J. A.
Ellman, K. D. Wilkinson and G. S. Salvesen, Positionalscanning fluorogenic substrate libraries reveal unexpected
specificity determinants of deubiquitinating enzymes (DUBs
), Biochem. J, 415, 367-375 (2008).
A. M. Berman, J. C. Lewis, R. G. Bergman and J. A. Ellman, Rh(I)-catalyzed direct arylation of pyridines and quinolines, J. Am. Chem. Soc, 130, 14926–14927 (2008).
S. Yotphan, R. G. Bergman and J. A. Ellman, The stereoselective formation of bicyclic enamines with bridgehead un-
saturation via tandem C-H bond activation/alkenylation/electrocyclization, J. Am. Chem. Soc, 130, 2452-2453 (2008).
J. C. Lewis, A. M. Berman, R. G. Bergman and J. A. Ellman, Rh(I)-catalyzed arylation of heterocycles via C-H bond
activation: Expanded scope through mechanistic insight, J.
Am. Chem. Soc, 130, 2493-2500 (2008).
D. A. Colby, R. G. Bergman and J. A. Ellman, Synthesis of
dihydropyridines and pyridines from imines and alkynes via
C-H activation, J. Am. Chem. Soc, 130, 3645-3651 (2008).
A. S. Tsai, R. G. Bergman and J. A. Ellman, Asymmetric
synthesis of (-)-incarvillateine employing an intramolecular
alkylation via Rh-catalyzed olefinic C-H bond activation, J.
Am. Chem. Soc, 130, 6316-6317 (2008).
K. Brak, P. S. Doyle, J. H. McKerrow and J. A. Ellman,
Identification of a new class of nonpeptidic inhibitors of cruzain, J. Am. Chem. Soc, 130, 6404-6410 (2008).
M. A. Beenen, C. An and J. A. Ellman, Asymmetric copper-catalyzed synthesis of alpha-amino boronate esters from
n-tert-butanesulfinyl aldimines, J. Am. Chem. Soc, 130,
6910-6911 (2008).
A. W. Patterson, H. M. Peltier and J. A. Ellman, Expedient
synthesis of N-methyl tubulysin analogues with high cytotoxicity, J. Org. Chem, 73, 4362-4369 (2008).
H. Harada, R. K. Thalji, R. G. Bergman and J. A. Ellman,
Enantioselective intramolecular hydroarylation of alkenes via
directed C-H bond activation, J. Org. Chem, 73, 6772-6779
(2008).
M. W. Gribble, J. A. Ellman and R. G. Bergman, Synthesis
of a benzodiazepine-derived rhodium NHC complex by C-H
bond activation, Organometallics, 27, 2152-2155 (2008).
A. W. Patterson, Development of the substrate activity
screening method for the identification of nonpeptidic protease inhibitors. Synthesis and biological study of tubulysin D
and related analogues. (D)
H. M. Peltier, Development of tert-butanesulfinamidebased methods and the application of these methods toward
the stereoselective syntheses of biologically relevant molecules including tubulysin D. (D)
J. C. Lewis, Discovery, optimization, and mechanisms of
new transformations proceeding via catalytic C-H bond activation. (D)
Y. T. Rosa-Bauza, Development of tools for studying protease activity and specificity. (D)
FLEMING, GRAHAM RICHARD (b.1949) Professor. B.Sc, 1971, University of Bristol, UK; Ph.D, 1974,
University of London, UK. Research Fellowship, 1974,
California Institute of Technology; University Research
Fellow & ARGC Research, 1975-1976, University of
Melbourne, Australia; Leverhulme Fellow, 1977-1979,
Royal Institution, UK. Physical Chemistry. Molecular
motion and the structure of liquids, influence of solutesolvent interactions on molecular dynamics, time resolved studies of protein motions, dynamics of energy
and charge transfer in photosynthesis, new types of nonlinear optical spectroscopy. TEL: (510) 643-2735 FAX:
(510) 642-6340
Web: www.cchem.berkeley.edu/grfgrp/
Email: fleming@cchem.berkeley.edu
GRFleming@lbl.gov
No publication information submitted for this edition.
FRANCIS, MATTHEW B. (b.1971) Assistant Professor. B.S, 1990, Miami University, Oxford, OH; Ph.D,
1999, Harvard University. Miller Institute Postdoctoral
Fellow, 1999-2001, University of California, Berkeley.
Chemical Biology; Organic Chemistry. Research areas of
interest include: The development of new strategies for
site-specific protein modification, the use of modified
self-assembling proteins for the construction of nanometer-scale architectures, polymeric agents for drug delivery applications, asymmetric catalysis, and the use of
combinatorial methods for development of new reactions. TEL: (510) 643-9915 FAX: (510) 643-3079
Web: www.cchem.berkeley.edu/francisgrp/
Email: francis@cchem.berkeley.edu
Rebecca A. Scheck and Matthew B. Francis, Regioselective labeling of antibodies through N-terminal transamination, ACS Chem. Biol, 2, 247-251 (2007).
Patrick G. Holder and Matthew B. Francis, Integration of a
self-assembling protein scaffold with water-soluble singlewalled carbon nanotubes, Angew. Chem., Int. Ed, 46, 43704373 (2007).
Ernest W. Kovacs, Jacob M. Hooker, Dante W. Romanini,
Patrick G. Holder, Katherine E. Berry and Matthew B. Francis, Dual-Surface-Modified Bacteriophage MS2 as an Ideal
Scaffold for a Viral Capsid-Based Drug Delivery System,
Bioconjugate Chem, 18, 1140-1147 (2007).
Harvey R. Johnson, Jacob M. Hooker, Matthew B. Francis
and Douglas S. Clark, Solubilization and stabilization of bacteriophage MS2 in organic solvents, Biotechnol. Bioeng, 97,
224-234 (2007).
Matthew B. Francis, New methods for protein bioconjugation, Chem. Biol, 2, 593-634 (2007).
Rebekah A. Miller, Andrew D. Presley and Matthew B.
Francis, Self-Assembling Light-Harvesting Systems from
Synthetically Modified Tobacco Mosaic Virus Coat Proteins,
J. Am. Chem. Soc, 129, 3104-3109 (2007).
Erik S. Douglas, Ravi A. Chandra, Carolyn R. Bertozzi,
Richard A. Mathies and Matthew B. Francis, Self-assembled
cellular microarrays patterned using DNA barcodes, Lab
Chip, 7, 1442-1448 (2007).
Jacob M. Hooker, Ankona Datta, Mauro Botta, Kenneth N.
Raymond and Matthew B. Francis, Magnetic Resonance
Contrast Agents from Viral Capsid Shells: A Comparison of
Exterior and Interior Cargo Strategies, Nano Lett, 7, 22072210 (2007).
Aaron P. Esser-Kahn and Matthew B. Francis, Proteincross-linked polymeric materials through site-selective bioconjugation, Angew. Chem., Int. Ed, 47, 3751-3754 (2008).
Joshua M. Gilmore, Rebecca A. Scheck, Aaron P. EsserKahn, Neel S. Joshi and Matthew B. Francis, N-terminal protein modification through a biomimetic transamination reaction. [Erratum to document cited in CA145:434296], Angew.
Chem., Int. Ed, 47, 7788 (2008).
Dante W. Romanini and Matthew B. Francis, Attachment
of Peptide Building Blocks to Proteins Through Tyrosine
Bioconjugation, Bioconjugate Chem, 19, 153-157 (2008).
Zachary M. Carrico, Dante W. Romanini, Ryan A. Mehl
and Matthew B. Francis, Oxidative coupling of peptides to a
virus capsid containing unnatural amino acids, Chem. Commun. (Cambridge, U. K.), 1205-1207 (2008).
Rebecca A. Scheck, Michel T. Dedeo, Anthony T. Iavarone and Matthew B. Francis, Optimization of a Biomimetic
Transamination Reaction, J. Am. Chem. Soc, 130, 1176211770 (2008).
Aaron P. Esser-Kahn, Anthony T. Iavarone and Matthew
B. Francis, Metallothionein-Cross-Linked Hydrogels for the
Selective Removal of Heavy Metals from Water, J. Am.
Chem. Soc, 130, 15820-15822 (2008).
Ankona Datta, Jacob M. Hooker, Mauro Botta, Matthew B.
Francis, Silvio Aime and Kenneth N. Raymond, High Relaxivity Gadolinium Hydroxypyridonate-Viral Capsid Conjugates: Nanosized MRI Contrast Agents, J. Am. Chem. Soc,
130, 2546-2552 (2008).
Jesse M. McFarland, Neel S. Joshi and Matthew B. Francis, Characterization of a Three-Component Coupling Reaction on Proteins by Isotopic Labeling and Nuclear Magnetic
Resonance Spectroscopy, J. Am. Chem. Soc, 130, 7639-7644
(2008).
Ying-Zhong Ma, Rebekah A. Miller, Graham R. Fleming
and Matthew B. Francis, Energy Transfer Dynamics in
Light-Harvesting Assemblies Templated by the Tobacco Mosaic Virus Coat Protein, J. Phys. Chem. B, 112, 6887-6892
(2008).
Aaron P. Esser-Kahn and Matthew B. Francis, Proteincrosslinked polymeric materials through site-selective bioconjugation, PMSE Prepr, 98, 851 (2008).
FRECHET, JEAN M. J. Professor. B.S, 1967, Institut
de Chimie et Physique Industrielles, Lyon; M.Sc, 1968,
SUNY Coll. Env. Sci. Forestry; M.S, 1969, Syracuse
University; Ph.D, 1971, Syracuse University; Ph.D,
1971, SUNY Coll. Env. Sci. Forestry; D.Sc.(Hon), 2002,
University of Lyon I (France); D.Sc.(Hon), 2004, University of Ottawa (Canada); D.Sc.(Hon), 2008, University of Liverpool (UK). Postdoctoral Fellowship, 19711972, University of Ottawa; IBM Professor of Chemistry, 1987-1995, Cornell University; Peter J. Debye Professor, 1995-1997, Cornell University; Head of Materials
Synthesis, 2001-2003, Lawrence Berkeley National Laboratory; Henry Rapoport Chair of Organic Chemistry,
2002, University of California Berkeley; Director Organic Nanostructures Facility, 2003-curre, The Molecular
Foundry, Lawrence Berkeley National Laboratory. Medicinal and/or Pharmaceutical Chemistry; Polymer Science. Organic and macromolecular synthesis, chemical
biology. Molecular self-assembly. Polymer therapeutics:
targeted delivery of diagnostic and therapeutic agents,
chemotherapy, nanoparticules in vaccines and immunotherapy, Energy harvesting and conversion. Plastic
electronics: Polymers in photovoltaics OLED transistors.
Artificial enzyme mimics in catalysis; Polymers in separation and molecular recognition, microfluidics. Nanolithography, surface patterning & molecular machines.
TEL: (510) 643-3077 FAX: (510) 643-3079
Web: www.frechet.com
Email: frechet@berkeley.edu
Shawn R. Scully, Paul B. Armstrong, Carine Edder, Jean
M. J. Frechet and Michael D. McGehee, Long-range resonant
energy transfer for enhanced exciton harvesting for organic
solar cells, Adv. Mater. (Weinheim, Ger.), 19, 2961-2966
(2007).
Itai Suez, Marco Rolandi, Scott A. Backer, Andreas Scholl,
Andrew Doran, David Okawa, Alex Zettl and Jean M. J. Frechet, High-field scanning probe lithography in hexadecane:
transitioning from field induced oxidation to solvent decomposition through surface modification, Adv. Mater. (Weinheim, Ger.), 19, 3570-3573 (2007).
Dieudonne A. Mair, Marco Rolandi, Marian Snauko, Richard Noroski, Frantisek Svec and Jean M. J. Frechet, RoomTemperature Bonding for Plastic High-Pressure Microfluidic
Chips, Anal. Chem. (Washington, DC, U. S.), 79, 5097-5102
(2007).
Timothy C. Logan, Douglas S. Clark, Timothy B. Stachowiak, Frantisek Svec and Jean M. J. Frechet, Photopatterning Enzymes on Polymer Monoliths in Microfluidic De-
CALIFORNIA, BERKELEY
vices for Steady-State Kinetic Analysis and Spatially Separated Multi-Enzyme Reactions, Anal. Chem. (Washington,
DC, U. S.), 79, 6592-6598 (2007).
Marco Rolandi, Itai Suez, Andreas Scholl and Jean M. J.
Frechet, Fluorocarbon resist for high-speed scanning probe
lithography, Angew. Chem., Int. Ed, 46, 7477-7480 (2007).
Seung H. Ko, Heng Pan, Costas P. Grigoropoulos, Christine K. Luscombe, Jean M. J. Frechet and Dimos Poulikakos,
Air stable high resolution organic transistors by selective laser sintering of ink-jet printed metal nanoparticles, Appl.
Phys. Lett, 90, 141103/1-141103/3 (2007).
Stephany M. Standley, Ines Mende, Sarah L. Goh, Young
Jik Kwon, Tristan T. Beaudette, Edgar G. Engleman and Jean
M. J. Frechet, Incorporation of CpG Oligonucleotide Ligand
into Protein-Loaded Particle Vaccines Promotes AntigenSpecific CD8 T-Cell Immunity, Bioconjugate Chem, 18, 7783 (2007).
Justin L. Mynar, Andrew P. Goodwin, Joel A. Cohen,
Yingzhong Ma, Graham R. Fleming and Jean M. J. Frechet,
Two-photon degradable supramolecular assemblies of lineardendritic copolymers, Chem. Commun. (Cambridge, U. K.),
2081-2082 (2007).
Scott A. Backer, Kevin Sivula, David F. Kavulak and Jean
M. J. Frechet, High Efficiency Organic Photovoltaics Incorporating a New Family of Soluble Fullerene Derivatives,
Chem. Mater, 19, 2927-2929 (2007).
Biwu Ma, Frank Lauterwasser, Lan Deng, C. Sebastian
Zonte, Bumjoon J. Kim, Jean M. J. Frechet, Carsten Borek
and Mark E. Thompson, New Thermally Cross-Linkable
Polymer and Its Application as a Hole-Transporting Layer
for Solution Processed Multilayer Organic Light Emitting
Diodes, Chem. Mater, 19, 4827-4832 (2007).
Amanda R. Murphy and Jean M. J. Frechet, Organic Semiconducting Oligomers for Use in Thin Film Transistors,
Chem. Rev. (Washington, DC, U. S.), 107, 1066-1096 (2007).
Andrew P. Goodwin, Stephanie S. Lam and Jean M. J. Frechet, Rapid, Efficient Synthesis of Heterobifunctional Biodegradable Dendrimers, J. Am. Chem. Soc, 129, 6994-6995
(2007).
Sridhar Rajaram, Tae-Lim Choi, Marco Rolandi and Jean
M. J. Frechet, Synthesis of Dendronized Diblock Copolymers via Ring-Opening Metathesis Polymerization and Their
Visualization Using Atomic Force Microscopy, J. Am. Chem.
Soc, 129, 9619-9621 (2007).
Laurent Geiser, Sebastiaan Eeltink, Frantisek Svec and
Jean M. J. Frechet, Stability and repeatability of capillary
columns based on porous monoliths of poly(butyl methacrylate-co-ethylene dimethacrylate), J. Chromatogr., A, 1140,
140-146 (2007).
Jonathan Germain, Jean M. J. Frechet and Frantisek Svec,
Hypercrosslinked polyanilines with nanoporous structure and
high surface area: potential adsorbents for hydrogen storage,
J. Mater. Chem, 17, 4989-4997 (2007).
Toby Sainsbury, Takashi Ikuno, David Okawa, Daniela
Pacile, Jean M. J. Frechet and Alex Zettl, Self-Assembly of
Gold Nanoparticles at the Surface of Amine- and ThiolFunctionalized Boron Nitride Nanotubes, J. Phys. Chem. C,
111, 12992-12999 (2007).
Timothy B. Stachowiak, Dieudonne A. Mair, Tyler G. Holden, L. James Lee, Frantisek Svec and Jean M. J. Frechet,
Hydrophilic surface modification of cyclic olefin copolymer
microfluidic chips using sequential photografting, J. Sep. Sci,
30, 1088-1093 (2007).
Sebastiaan Eeltink, Laurent Geiser, Frantisek Svec and
Jean M. J. Frechet, Optimization of the porous structure and
polarity of polymethacrylate-based monolithic capillary columns for the LC-MS separation of enzymatic digests, J. Sep.
Sci, 30, 2814-2820 (2007).
Sebastiaan Eeltink, Emily F. Hilder, Laurent Geiser, Frantisek Svec, Jean M. J. Frechet, Gerard P. Rozing, Peter J.
Schoenmakers and Wim Th. Kok, Controlling the surface
chemistry and chromatographic properties of methacrylateester-based monolithic capillary columns via photografting,
J. Sep. Sci, 30, 407-413 (2007).
Scott A. Backer, Itai Suez, Zachary M. Fresco, Jean M. J.
Frechet, Josh A. Conway, Shantha Vedantam, Hyojune Lee
and Eli Yablonovitch, Evaluation of new materials for plasmonic imaging lithography at 476 nm using near field scanning optical microscopy, J. Vac. Sci. Technol., B: Microelectron. Nanometer Struct.—Process., Meas., Phenom, 25,
1336-1339 (2007).
Marco Rolandi, David Okawa, Scott A. Backer, Alex Zettl
and Jean M. J. Frechet, Fabrication of magnetic force microscopy probes via localized electrochemical deposition of cobalt, J. Vac. Sci. Technol., B: Microelectron. Nanometer
Struct.—Process., Meas., Phenom, 25, L39-L42 (2007).
Scott A. Backer, Itai Suez, Zachary M. Fresco, Marco Rolandi and Jean M. J. Frechet, Covalent Formation of Nanoscale Fullerene and Dendrimer Patterns, Langmuir, 23, 22972299 (2007).
Rachna Jain, Stephany M. Standley and Jean M. J. Frechet,
Synthesis and degradation of pH-sensitive linear poly(amidoamine)s, Macromolecules, 40, 452-457 (2007).
Nobuhiro Watanabe, Clayton Mauldin and Jean M. J. Frechet, Synthesis of Terminally Dendronized Poly(3-hexylthiophene)s as a Platform for Functional Conjugated Polymers,
Macromolecules (Washington, DC, U. S.), 40, 6793-6795
(2007).
Barry C. Thompson, Bumjoon J. Kim, David F. Kavulak,
Kevin Sivula, Clayton Mauldin and Jean M. J. Frechet, Influence of Alkyl Substitution Pattern in Thiophene Copolymers
on Composite Fullerene Solar Cell Performance, Macromolecules (Washington, DC, U. S.), 40, 7425-7428 (2007).
Biwu Ma, Bumjoon J. Kim, Lan Deng, Daniel A. Poulsen,
Mark E. Thompson and Jean M. J. Frechet, Bipolar Copolymers as Host for Electroluminescent Devices: Effects of Molecular Structure on Film Morphology and Device Performance, Macromolecules (Washington, DC, U. S.), 40, 81568161 (2007).
Seung H. Ko, Inkyu Park, Heng Pan, Costas P. Grigoropoulos, Albert P. Pisano, Christine K. Luscombe and Jean M.
J. Frechet, Direct Nanoimprinting of Metal Nanoparticles for
Nanoscale Electronics Fabrication, Nano Lett, 7, 1869-1877
(2007).
Seung H. Ko, Heng Pan, Costas P. Grigoropoulos, Christine K. Luscombe, Jean M. J. Frechet and Dimos Poulikakos,
All-inkjet-printed flexible electronics fabrication on a polymer substrate by low-temperature high-resolution selective
laser sintering of metal nanoparticles, Nanotechnology, 18,
345202/1-345202/8 (2007).
Matthew J. Comstock, Niv Levy, Armen Kirakosian, Jongweon Cho, Frank Lauterwasser, Jessica H. Harvey, David A.
Strubbe, Jean M. J. Frechet, Dirk Trauner, Steven G. Louie
and Michael F. Crommie, Reversible Photomechanical
Switching of Individual Engineered Molecules at a Metallic
Surface, Phys. Rev. Lett, 99, 038301/1-038301/4 (2007).
Barry C. Thompson, David Kavulak, Kevin Sivula, Tabitha Clem, Tom Holcombe, Paul B. Armstrong, Michael A.
Oar and Jean M. J. Frechet, Development of conjugated
polymers for use in all-polymer solar cells, Polym. Prepr.
(Am. Chem. Soc., Div. Polym. Chem.), 48, 36 (2007).
Vignesh Gowrishankar, Christine K. Luscombe, Michael
D. McGehee and Jean M. J. Frechet, High-efficiency, Cdfree copper-indium-gallium-diselenide/polymer hybrid solar
cells, Sol. Energy Mater. Sol. Cells, 91, 807-812 (2007).
Inkyu Park, Seung H. Ko, Heng Pan, Costas P. Grigoropoulos, Albert P. Pisano, Jean M. J. Frechet, Eung-Sug Lee
and Jun-Ho Jeong, Nanoscale patterning and electronics on
flexible substrate by direct nanoimprinting of metallic nanoparticles, Adv. Mater. (Weinheim, Ger.), 20, 489-496 (2008).
Barry C. Thompson and Jean M. J. Frechet, Polymer-fullerene composite solar cells, Angew. Chem., Int. Ed, 47, 5877 (2008).
Matthew J. Comstock, Niv Levy, Jongweon Cho, Luis
Berbil-Bautista, Michael F. Crommie, Daniel A. Poulsen and
Jean M. J. Frechet, Measuring reversible photomechanical
switching rates for a molecule at a surface, Appl. Phys. Lett,
92, 123107/1-123107/3 (2008).
Steven J. Guillaudeu, Megan E. Fox, Yarah M. Haidar, Edward E. Dy, Francis C. Szoka and Jean M. J. Frechet, PEGylated Dendrimers with Core Functionality for Biological Applications, Bioconjugate Chem, 19, 461-469 (2008).
Jessica L. Cohen, Adah Almutairi, Joel A. Cohen, Matt
Bernstein, Steven L. Brody, Daniel P. Schuster and Jean M.
J. Frechet, Enhanced Cell Penetration of Acid-Degradable
Particles Functionalized with Cell-Penetrating Peptides, Bioconjugate Chem, 19, 876-881 (2008).
Sergey E. Paramonov, Eric M. Bachelder, Tristan T. Beaudette, Stephany M. Standley, Cameron C. Lee, Jesse Dashe
and Jean M. J. Frechet, Fully Acid-Degradable Biocompatible Polyacetal Microparticles for Drug Delivery, Bioconjugate Chem, 19, 911-919 (2008).
Jonathan Germain, Frantisek Svec and Jean M. J. Frechet,
Preparation of Size-Selective Nanoporous Polymer Networks
of Aromatic Rings: Potential Adsorbents for Hydrogen Storage, Chem. Mater, 20, 7069-7076 (2008).
Eric M. Bachelder, Tristan T. Beaudette, Kyle E. Broaders,
Jesse Dashe and Jean M. J. Frechet, Acetal-Derivatized Dextran: An Acid-Responsive Biodegradable Material for Therapeutic Applications, J. Am. Chem. Soc, 130, 10494-10495
(2008).
Stefan J. Pastine, David Okawa, Brian Kessler, Marco Rolandi, Mark Llorente, Alex Zettl and Jean M. J. Frechet, A
Facile and Patternable Method for the Surface Modification
of Carbon Nanotube Forests Using Perfluoroarylazides, J.
Am. Chem. Soc, 130, 4238-4239 (2008).
Min Zhao, Brett Helms, Elena Slonkina, Simone Friedle,
Dongwhan Lee, Jennifer DuBois, Britt Hedman, Keith O.
Hodgson, Jean M. J. Frechet and Stephen J. Lippard, Iron
Complexes of Dendrimer-Appended Carboxylates for Activating Dioxygen and Oxidizing Hydrocarbons, J. Am. Chem.
Soc, 130, 4352-4363 (2008).
Adah Almutairi, Steven J. Guillaudeu, Mikhail Y. Berezin,
Samuel Achilefu and Jean M. J. Frechet, Biodegradable pHSensing Dendritic Nanoprobes for Near-Infrared Fluorescence Lifetime and Intensity Imaging, J. Am. Chem. Soc,
130, 444-445 (2008).
Yonggui Chi, Steven T. Scroggins and Jean M. J. Frechet,
One-Pot Multi-Component Asymmetric Cascade Reactions
Catalyzed by Soluble Star Polymers with Highly Branched
Non-Interpenetrating Catalytic Cores, J. Am. Chem. Soc, 130,
6322-6323 (2008).
Shelley A. Claridge, Alexander J. Mastroianni, Yeung B.
Au, Huiyang W. Liang, Christine M. Micheel, Jean M. J.
Frechet and A. Paul Alivisatos, Enzymatic Ligation Creates
Discrete Multinanoparticle Building Blocks for Self-Assembly, J. Am. Chem. Soc, 130, 9598-9605 (2008).
Pavel A. Levkin, Sebastiaan Eeltink, Thomas R. Stratton,
Reid Brennen, Karla Robotti, Hongfeng Yin, Kevin Killeen,
Frantisek Svec and Jean M. J. Frechet, Monolithic porous
polymer stationary phases in polyimide chips for the fast
5
high-performance liquid chromatography separation of proteins and peptides, J. Chromatogr., A, 1200, 55-61 (2008).
Laurent Geiser, Sebastiaan Eeltink, Frantisek Svec and
Jean M. J. Frechet, In-line system containing porous polymer
monoliths for protein digestion with immobilized pepsin,
peptide preconcentration and nano-liquid chromatography separation coupled to electrospray ionization mass spectroscopy, J. Chromatogr., A, 1188, 88-96 (2008).
Adah Almutairi, Walter J. Akers, Mikhail Y. Berezin,
Samuel Achilefu and Jean M. J. Frechet, Monitoring the
Biodegradation of Dendritic Near-Infrared Nanoprobes by in
Vivo Fluorescence Imaging, Mol. Pharmaceutics, 5, 11031110 (2008).
Eric M. Bachelder, Tristan T. Beaudette, Kyle E. Broaders,
Sergey E. Paramonov, Jesse Dashe and Jean M. J. Frechet,
Acid-Degradable Polyurethane Particles for Protein-Based
Vaccines: Biological Evaluation and in Vitro Analysis of
Particle Degradation Products, Mol. Pharmaceutics, 5, 876884 (2008).
Shelley A. Claridge, Huiyang W. Liang, S. Roger Basu,
Jean M. J. Frechet and A. Paul Alivisatos, Isolation of Discrete Nanoparticle-DNA Conjugates for Plasmonic Applications, Nano Lett, 8, 1202-1206 (2008).
GEISSLER, PHILLIP LEWIS (b.1974) Associate
Professor. B.A, 1996, Cornell University; Ph.D, 2000,
University of California, Berkeley. Postdoctoral researcher, 2000, University of California, Berkeley; Postdoctoral researcher, 2001, Harvard University; MIT Science Fellow, 2002-2003, M.I.T. Physical Chemistry;
Theoretical Chemistry. My research concerns the microscopic behavior of complex biological and material systems. A second interest is the dynamics of nanometersized solutes in a liquid undergoing phase change, determining how nonequilibrium fluctuations in such a system can be exploited to guide the spontaneous formation
of useful patterned assemblies. TEL: (510) 642-8716
FAX: (510) 643-5623
Web: www.chem.berkeley.edu/people/faculty/geissler/
geissler.html
Email: geissler@cchem.berkeley.edu
R. York, W. Browne, P. L. Geissler and G. Somorjai, Peptides adsorbed on hydrophobic surfaces—A sum frequency
generation vibrational spectroscopy and modeling study, Israel J. Chem, 47, 51-58 (2007).
J. Smith, R. Saykally and P. L. Geissler, The effects of dissolved halide anions on hydrogen bonding in liquid water, J.
Am. Chem. Soc, 129, 13847-13856 (2007).
S. Whitelam and P. L. Geissler, Avoiding unphysical kinetic traps in Monte Carlo simulations of strongly attractive
particles, J. Chem. Phys, 127, 154101 (2007).
M. Gruenwald, C. Dellago and P. L. Geissler, An efficient
transition path sampling algorithm for nanoparticles under
pressure, J. Chem. Phys, 127, 154718 (2007).
Eliane H. Trepagnier, Aleksandra Radenovic, David Sivak,
Phillip Geissler and Jan Liphardt, Controlling DNA Capture
and Propagation through Artificial Nanopores, Nano Lett, 7,
2824-2830 (2007).
H. Shroff, D. Sivak, J. Siegel, A. McEvoy, M. Siu, A. Spakowitz, P. L. Geissler and J. Liphardt, Optical measurement
of mechanical forces inside short DNA loops, Biophys. J, 94,
2179-2186 (2008).
S. Whitelam, S. Pronk and P. L. Geissler, There and (slowly) back again: Entropy-driven hysteresis in a model of DNA
overstretching, Biophys. J, 2452-2469 (2008).
S. Pronk and P. L. Geissler, Faster strain fluctuation methods through partial volume updates, cond-mat, 08082218
(2008).
S. Whitelam, S. Pronk and P. L. Geissler, Stretching chimeric DNA: A test for the putative S-form, J. Chem. Phys,
129, 205101 (2008).
M. Park, A. Nedoma, P. L. Geissler, N. Balsara, A. Jackson and D. Cookson, Humidity-induced phase transitions in
ion-containing block copolymer membranes, Macromolecules, 41, 2271-2277 (2008).
A. Liu, D. Richmond, L. Maibaum, S. Pronk, P. L. Geissler and D. Fletcher, Membrane-induced bundling of actin filaments, Nature Physics, 4 (2008).
S. Pronk, P. L. Geissler and D. A. Fletcher, Limits of filopodium stability, Physical Review Letters, 100, 258102
(2008).
M. Gruenwald, C. Dellago and P. L. Geissler, Precision
shooting: Sampling long transition pathways, The Journal of
Chemical Physics, 129, 194101 (2008).
GROVES, JAY T. (b.1970) Associate Professor. B.S,
1992, Tufts University; Ph.D, 1998, Stanford University.
Visiting Scholar, 1998-1999, Academia Sinica, Taipei
Taiwan; Division Director’s Fellow, 1999-2001, Lawrence Berkeley National Laboratory. Biophysics/Biophysical Chemistry; Physical Chemistry. Biological surface
chemistry, signal transduction at intercellular synapses,
nano-scale imaging and fabrication, biomembrane colloids. TEL: (510) 666-3602 FAX: (510) 666-3603
Web: www.groveslab.cchem.berkeley.edu
Email: JTGroves@LBL.Gov
Publication list has not been verified by the department.
Jay T. Groves, Bending mechanics and molecular organi-
6
CALIFORNIA, BERKELEY
zation in biological membranes, Annu. Rev. Phys. Chem, 58,
697-717 (2007).
Margot G. Paulick, Amber R. Wise, Martin B. Forstner,
Jay T. Groves and Carolyn R. Bertozzi, Synthetic Analogues
of Glycosylphosphatidylinositol-Anchored Proteins and
Their Behavior in Supported Lipid Bilayers, J. Am. Chem.
Soc, 129, 11543-11550 (2007).
David Rabuka, Raghuveer Parthasarathy, Goo Soo Lee,
Xing Chen, Jay T. Groves and Carolyn R. Bertozzi, Hierarchical Assembly of Model Cell Surfaces: Synthesis of Mucin Mimetic Polymers and Their Display on Supported Bilayers, J. Am. Chem. Soc, 129, 5462-5471 (2007).
Raghuveer Parthasarathy, David Rabuka, Carolyn R. Bertozzi and Jay T. Groves, Molecular Orientation of Membrane-Anchored Mucin Glycoprotein Mimics, J. Phys. Chem.
B, 111, 12133-12135 (2007).
Bryan L. Jackson and Jay T. Groves, Hybrid Protein-Lipid
Patterns from Aluminum Templates, Langmuir, 23, 20522057 (2007).
Jwa-Min Nam, Kyung-Jin Jang and Jay T. Groves, Detection of proteins using a colorimetric bio-barcode assay, Nat.
Protoc, 2, 1438-1444 (2007).
Margot G. Paulick, Martin B. Forstner, Jay T. Groves and
Carolyn R. Bertozzi, A chemical approach to unraveling the
biological function of the glycosylphosphatidylinositol anchor, Proc. Natl. Acad. Sci. U. S. A, 104, 20332-20337
(2007).
Raghuveer Parthasarathy and Jay T. Groves, Curvature and
spatial organization in biological membranes, Soft Matter, 3,
24-33 (2007).
Jay T. Groves, Raghuveer Parthasarathy and Martin B.
Forstner, Fluorescence imaging of membrane dynamics,
Annu. Rev. Biomed. Eng, 10, 311-338 (2008).
William J. Galush, Jeffrey A. Nye and Jay T. Groves,
Quantitative fluorescence microscopy using supported lipid
bilayer standards, Biophys. J, 95, 2512-2519 (2008).
Andrew L. DeMond, Kaspar D. Mossman, Toby Starr, Michael L. Dustin and Jay T. Groves, T cell receptor microcluster transport through molecular mazes reveals mechanism of
translocation, Biophys. J, 94, 3286-3292 (2008).
Amber R. Wise, Jeffrey A. Nye and Jay T. Groves, Discrete arrays of liquid-crystal-supported proteolipid monolayers as phantom cell surfaces, ChemPhysChem, 9, 1688-1692
(2008).
David Rabuka, Martin B. Forstner, Jay T. Groves and Carolyn R. Bertozzi, Noncovalent Cell Surface Engineering: Incorporation of Bioactive Synthetic Glycopolymers into Cellular Membranes, J. Am. Chem. Soc, 130, 5947-5953 (2008).
Jeffrey A. Nye and Jay T. Groves, Kinetic Control of Histidine-Tagged Protein Surface Density on Supported Lipid Bilayers, Langmuir, 24, 4145-4149 (2008).
Bryan L. Jackson, Jeffrey A. Nye and Jay T. Groves, Electrical Manipulation of Supported Lipid Membranes by Embedded Electrodes, Langmuir, 24, 6189-6193 (2008).
Nathan G. Clack, Khalid Salaita and Jay T. Groves, Electrostatic readout of DNA microarrays with charged microspheres, Nat. Biotechnol, 26, 825-830 (2008).
Jodi Gureasko, William J. Galush, Sean Boykevisch, Holger Sondermann, Dafna Bar-Sagi, Jay T. Groves and John
Kuriyan, Membrane-dependent signal integration by the Ras
activator Son of sevenless, Nat. Struct. Mol. Biol, 15, 452461 (2008).
Jodi Gureasko, William J. Galush, Sean Boykevisch, Holger Sondermann, Dafna Bar-Sagi, Jay T. Groves and John
Kuriyan, Membrane-dependent signal integration by the Ras
activator Son of sevenless. [Erratum to document cited in
CA148:579207], Nat. Struct. Mol. Biol, 15, 651 (2008).
HAMMOND, MING (b.1978) Assistant Professor.
B.S, 2000, California Institute of Technology; Ph.D,
2005, University of California, Berkeley. HHMI Research Associate, 2005-2008, Yale University; Burroughs Wellcome Fund CASI Postdoctoral Fellow,
2008-2009, Yale University. Biochemistry; Chemical
Biology. The long-term goal of my research is to drive
our understanding of the scope and molecular mechanisms of RNA-based gene regulation in eukaryotes, currently focused on plants. Computational discovery of
candidate RNAs is followed by detailed experimental
validation and mechanistic analysis of select RNAs that
control interesting biological pathways. We are also interested in designing novel gene control circuits for biotechnology applications. TEL: (510) 642-5882 FAX:
(510) 642-9675
Web: chem.berkeley.edu
Email: mingch@berkeley.edu
M. C. Hammond, B. Z. Harris, W. A. Lim and P. A. Bartlett, Beta-strand peptidomimetics as potent PDZ ligands,
Chemistry and Biology, 13, 1247-1251 (2006).
N. Sudarsan, M. C. Hammond, K. F. Block, R. Welz, J. E.
Barrick, A. Roth and R. R. Breaker, Tandem riboswitch architectures exhibit complex gene control functions, Science,
314, 300-304 (2006).
M. C. Hammond and P. A. Bartlett, Synthesis of amino
acid-derived cyclic acyl amidines for use in beta-strand peptidomimetics, Journal of Organic Chemistry, 72, 3104-3107
(2007).
Z. Weinberg, E. E. Regulski, M. C. Hammond, J. E. Barrick, Z. Yao, W. L. Ruzzo and R. R. Breaker, The aptamer
core of SAM-IV riboswitches mimics the ligand-binding site
of SAM-I riboswitches, RNA, 14, 822-828 (2008).
HARRIS, CHARLES BONNER (b.1940) Professor.
B.S, 1963, University of Michigan; Ph.D, 1966, M.I.T.
AEC Postdoctoral Fellow, 1967, M.I.T. Chemical Physics; Surface Chemistry. Fundamental studies of chemical
reactions in liquids on the femtosecond timescale; electron dynamics at interfaces using two photon photoemission on ultrafast timescales; statistical mechanics, molecular dynamic simulations of chemical reactions in liquids. TEL: (510) 642-2814 FAX: (510) 642-6724
Web: www.chem.berkeley.edu/people/faculty/harris_c/
harris_c.html
Email: cbharris@berkeley.edu
No publication information submitted for this edition.
HARRIS, ROBERT ARTHUR (b.1936) Professor.
B.S, 1957, University of Illinois; M.S, 1959, University
of Chicago; Ph.D, 1960, University of Chicago. Junior
Fellow, 1960-1963, Harvard University, Society of Fellows. Trying to understand a little bit of the universe.
TEL: (510) 642-4322
Email: raharris@uclink4.berkeley.edu
No publication information submitted for this edition.
HEAD-GORDON, MARTIN (b.1962) Professor.
B.Sc, 1983, Monash University; M.Sc, 1985, Monash
University; Ph.D, 1989, Carnegie-Mellon University.
Postdoctoral Member of Technical Staff, 1989-1992,
AT&T Bell Laboratories. Computational Chemistry;
Theoretical Chemistry. Electronic structure theory; new
methods for calculating ground and electronic excited
states of molecules and surfaces; linear scaling and fast
algorithms for electronic structure calculations; nonradiative coupling and nonadiabatic dynamics; gas surface
interactions. TEL: (510) 642-5957 FAX: (510) 643-1255
Web: www.cchem.berkeley.edu/mhggrp/
Email: mhg@cchem.berkeley.edu
Publication list has not been verified by the department.
Robert A. DiStasio, Jr., Gert von Helden, Ryan P. Steele
and Martin Head-Gordon, On the T-shaped structures of the
benzene dimer, Chem. Phys. Lett, 437, 277-283 (2007).
David W. Small and Martin Head-Gordon, Correction to
constrained coupled cluster doubles models based on the second coupled cluster central moment, J. Chem. Phys, 127,
064102/1-064102/7 (2007).
Rohini C. Lochan and Martin Head-Gordon, Orbital-optimized opposite-spin scaled second-order correlation: An economical method to improve the description of open-shell
molecules, J. Chem. Phys, 126, 164101/1-164101/11 (2007).
Rohini C. Lochan, Yihan Shao and Martin Head-Gordon,
Quartic-Scaling Analytical Energy Gradient of Scaled Opposite-Spin Second-Order Moller-Plesset Perturbation Theory,
J. Chem. Theory Comput, 3, 988-1003 (2007).
Yousung Jung, Yihan Shao and Martin Head-Gordon, Fast
evaluation of scaled opposite spin second-order Moller-Plesset correlation energies using auxiliary basis expansions and
exploiting sparsity, J. Comput. Chem, 28, 1953-1964 (2007).
Robert A. Distasio, Jr., Ryan P. Steele, Young Min Rhee,
Yihan Shao and Martin Head-Gordon, An improved algorithm for analytical gradient evaluation in resolution-of-theidentity second-order Moller-Plesset perturbation theory: application to alanine tetrapeptide conformational analysis, J.
Comput. Chem, 28, 839-856 (2007).
Young Min Rhee and Martin Head-Gordon, Scaled Second-Order Perturbation Corrections to Configuration Interaction Singles: Efficient and Reliable Excitation Energy Methods, J. Phys. Chem. A, 111, 5314-5326 (2007).
Rustam Z. Khaliullin, Erika A. Cobar, Rohini C. Lochan,
Alexis T. Bell and Martin Head-Gordon, Unravelling the Origin of Intermolecular Interactions Using Absolutely Localized Molecular Orbitals, J. Phys. Chem. A, 111, 8753-8765
(2007).
Rustam Z. Khaliullin, Martin Head-Gordon and Alexis T.
Bell, Theoretical Study of Solvent Effects on the Thermodynamics of Iron(III) [Tetrakis(pentafluorophenyl)]porphyrin
Chloride Dissociation, J. Phys. Chem. B, 111, 10992-10998
(2007).
Robert A. Distasio, Jr. and Martin Head-Gordon, Optimized spin-component scaled second-order Moller-Plesset
perturbation theory for intermolecular interaction energies,
Mol. Phys, 105, 1073-1083 (2007).
Ryan P. Steele and Martin Head-Gordon, Dual-basis selfconsistent field methods: 6-31G* calculations with a minimal
6-4G primary basis, Mol. Phys, 105, 2455-2473 (2007).
Robert A. Distasio, Jr., Ryan P. Steele and Martin HeadGordon, The analytical gradient of dual-basis resolution-ofthe-identity second-order Moller-Plesset perturbation theory,
Mol. Phys, 105, 2731-2742 (2007).
Joseph E. Subotnik, Alex Sodt and Martin Head-Gordon,
Localized orbital theory and ammonia triborane, Phys. Chem.
Chem. Phys, 9, 5522-5530 (2007).
Erika A. Cobar, Rustam Z. Khaliullin, Robert G. Bergman
and Martin Head-Gordon, Theoretical study of the rheniumalkane interaction in transition metal-alkane ␴-complexes,
Proc. Natl. Acad. Sci. U. S. A, 104, 6963-6968 (2007).
Westin Kurlancheek, Yousung Jung and Martin Head-Gor-
don, Effects of ligands and spin-polarization on the preferred
conformation of distannynes, Dalton Trans, 4428-4435
(2008).
Rohini C. Lochan, Rustam Z. Khaliullin and Martin HeadGordon, Interaction of Molecular Hydrogen with Open Transition Metal Centers for Enhanced Binding in Metal-Organic
Frameworks: A Computational Study, Inorg. Chem. (Washington, DC, U. S.), 47, 4032-4044 (2008).
David W. Small and Martin Head-Gordon, Central moments in quantum chemistry, Int. J. Quantum Chem, 108,
1220-1231 (2008).
Young Min Rhee and Martin Head-Gordon, A Delicate
Electronic Balance between Metal and Ligand in [Cu-P-CuP] Diamondoids: Oxidation State Dependent Plasticity and
the Formation of a Singlet Diradicaloid, J. Am. Chem. Soc,
130, 3878-3887 (2008).
Keith V. Lawler, Gregory J. O. Beran and Martin HeadGordon, Symmetry breaking in benzene and larger aromatic
molecules within generalized valence bond coupled cluster
methods, J. Chem. Phys, 128, 024107/1-024107/13 (2008).
Joseph E. Subotnik, Alex Sodt and Martin Head-Gordon,
The limits of local correlation theory: Electronic delocalization and chemically smooth potential energy surfaces, J.
Chem. Phys, 128, 034103/1-034103/12 (2008).
David Casanova and Martin Head-Gordon, The spin-flip
extended single excitation configuration interaction method,
J. Chem. Phys, 129, 064104/1-064104/12 (2008).
Jeng-Da Chai and Martin Head-Gordon, Systematic optimization of long-range corrected hybrid density functionals,
J. Chem. Phys, 128, 084106/1-084106/15 (2008).
Alex Sodt and Martin Head-Gordon, Hartree-Fock exchange computed using the atomic resolution of the identity
approximation, J. Chem. Phys, 128, 104106/1-104106/11
(2008).
David Casanova, Young Min Rhee and Martin Head-Gordon, Quasidegenerate scaled opposite spin second order perturbation corrections to single excitation configuration interaction, J. Chem. Phys, 128, 164106/1-164106/11 (2008).
Anthony Goodrow, Alexis T. Bell and Martin Head-Gordon, Development and application of a hybrid method involving interpolation and ab initio calculations for the determination of transition states, J. Chem. Phys, 129, 174109/1174109/12 (2008).
Rustam Z. Khaliullin, Alexis T. Bell and Martin HeadGordon, Analysis of charge transfer effects in molecular
complexes based on absolutely localized molecular orbitals,
J. Chem. Phys, 128, 184112/1-184112/16 (2008).
Anthony D. Dutoi and Martin Head-Gordon, A Study of
the Effect of Attenuation Curvature on Molecular Correlation
Energies by Introducing an Explicit Cutoff Radius into TwoElectron Integrals, J. Phys. Chem. A, 112, 2110-2119 (2008).
Tobias Benighaus, Robert A. DiStasio, Jr., Rohini C. Lochan, Jeng-Da Chai and Martin Head-Gordon, Semiempirical
Double-Hybrid Density Functional with Improved Description of Long-Range Correlation, J. Phys. Chem. A, 112,
2702-2712 (2008).
Karma R. Sawyer, Ryan P. Steele, Elizabeth A. Glascoe,
James F. Cahoon, Jacob P. Schlegel, Martin Head-Gordon
and Charles B. Harris, Direct Observation of Photoinduced
Bent Nitrosyl Excited-State Complexes, J. Phys. Chem. A,
112, 8505-8514 (2008).
Joseph E. Subotnik and Martin Head-Gordon, Exploring
the accuracy of relative molecular energies with local correlation theory, J. Phys.: Condens. Matter, 20, 294211/1294211/13 (2008).
Alex J. W. Thom and Martin Head-Gordon, Locating Multiple Self-Consistent Field Solutions: An Approach Inspired
by Metadynamics, Phys. Rev. Lett, 101, 193001/1-193001/4
(2008).
HEARST, JOHN EUGENE (b.1935) Professor Emeritus. B.E, 1957, Yale University; Ph.D, 1961, California Inst. Technology; D.Sc, 1992, Lehigh University.
NSF Fellowship, 1961-1962, Dartmouth College. Biotechnology; Chemical Biology. Nucleic acid chemistry;
transcription; translation; psoralen photochemistry; photosynthesis; DNA excision repair; DNA structure and
elasticity; luminescent lanthanide chelates; inactivation
of pathogens in blood components; bone marrow transplantation. TEL: (510) 642-3556 FAX: (510) 524-0799
Web: www.cchem.berkeley.edu/~jehgrp/
Email: jehearst@cchem.berkeley.edu
jehearst@lbl.gov
No publication information submitted for this edition.
HEATHCOCK, CLAYTON HOWELL (b.1936)
Gilbert Newton Lewis Professor. B.S, 1958, Abilene
Christian College; Ph.D, 1963, University of Colorado.
NSF Fellowship, 1964, Columbia University. New synthetic methods, total synthesis of natural products,
stereochemistry, enolate chemistry. TEL: (510) 6423360 FAX: (510) 643-9480
Web: www.cchem.berkeley.edu/~chhgrp/index.htm
Email: heathcock@cchem.berkeley.edu
No publication information submitted for this edition.
HOFFMAN, DARLEANE CHRISTIAN (b.1926)
Professor of the Graduate School, Dept. of Chem. B.S,
1948, Iowa State University; Ph.D, 1951, Iowa State
CALIFORNIA, BERKELEY
University; Sc.D.(Hon.), 2000, Clark University, USA;
D.Sc.(Hon), 2001, University of Bern, Switzerland. NSF
Senior Postdoctoral Fellowship, 1964-1965, Oslo, Norway; Guggenheim Fellowship, 1978-1979, University of
California, Berkeley, Lawrence Berkeley Laboratory.
Nuclear Chemistry. Atom-at-a-time studies of the chemical and nuclear properties of the heaviest elements including first investigations of the chemical properties of
seaborgium (element 106), bohrium (element 107) and
hassium (element 108). Production of new neutron-rich
heavy element isotopes; systemaics of heavy-ion reactions. Mechanisms spontaneous fission; electron-capture
delayed fission. anual, automated rapid chemical separations. Nuclear power as clean, sustainable energy source.
Nuclear forensics. TEL: (510) 486-4474 FAX: (510)
486-7444
Web: www.gateway.lbl.gov
Email: dchoffman@lbl.gov
Darleane C. Hoffman, Exploring the frontiers of nuclear
and radiochemistry, J. Nucl. Radiochem. Sci, 6, 35-38
(2007).
Darleane C. Hoffman, Past, present, and future of nuclear
and radiochemistry in the U. S, J. Nucl. Radiochem. Sci, 8, iv
(2007).
Darleane C. Hoffman, Atom-at-a-time studies of the transactinide elements, J. Radioanalytical & Nucl. Chem, 276,
525-532 (2008).
J. M. Gates, S. L. Nelson, K. E. Gregorich, I. Dragojevic,
Ch. E. Düllmann, P. A. Ellison, C. M. Folden III, M. A. Garcia, L. Stavsetra, R. Sudowe, D. C. Hoffman and H. Nitsche,
Comparison of reactions for the production of 258,257Db: 208Pb
(51V,xn) and 209Bi(50Ti,xn), Phys. Rev. C, 78, 034604 (2008).
JOHNSTON, HAROLD S. (b.1920) Professor Emeritus. A.B, 1941, Emory University; Ph.D, 1948, California Institute of Technology. Kinetics and photochemistry
of homogeneous gaseous reactions; oxides of nitrogen;
ozone; chemistry in the atmosphere; spectra of free radical intermediates. TEL: (510) 525-6810 FAX: (510) 5286019
Email: hsj@berkeley.edu
Publication list has not been verified by the department.
Joel D. Burley and Harold S. Johnston, A simple calorimetric experiment that highlights aspects of global heat retention and global warming, J. Chem. Educ, 84, 1686-1688
(2007).
JOLLY, WILLIAM LEE (b.1927) Professor of
Chemistry, Emeritus. B.S, 1948, University of Illinois;
M.S, 1949, University of Illinois; Ph.D, 1952, University
of California, Berkeley. The chemistry of photography.
TEL: (510) 642-2413
No publication information submitted for this edition.
KIM, SUNG-HOU (b.1937) Professor. B.S, 1960,
Seoul National University, Korea; M.S, 1962, Seoul National University, Korea; Ph.D, 1966, University of Pittsburgh. Research Associate, 1966-1970, M.I.T; Senior
Research Scientist, 1970-1972, Massachusetts Institute
of Technology. Biophysics/Biophysical Chemistry; Biotechnology. Molecular structure and function of proteins.
Structural genomics. Protein evolution. Computational
genomics. Drug design. TEL: (510) 643-7377 FAX:
(510) 486-7080
Web: www-kimgrp.lbl.gov/index.html
Email: shkim@cchem.berkeley.edu
shkim@lbl.gov
Ursula Schulze-Gahmen and Sung-Hou Kim, Three-dimensional structures of cyclin-dependent kinases and their
inhibitor complexes, Inhib. Cyclin-Depend. Kinases Anti-Tumor Agents, 143-164, 4 plates (2007).
Debanu Das, Qian Steven Xu, Jonas Y. Lee, Irina Ankoudinova, Candice Huang, Yun Lou, Andy DeGiovanni, Rosalind Kim and Sung-Hou Kim, Crystal structure of the multidrug efflux transporter AcrB at 3.1Å resolution reveals the
N-terminal region with conserved amino acids, J. Struct.
Biol, 158, 494-502 (2007).
Dong Hae Shin, Jingtong Hou, John-Marc Chandonia, Debanu Das, In-Geol Choi, Rosalind Kim and Sung-Hou Kim,
Structure-based inference of molecular functions of proteins
of unknown function from Berkeley Structural Genomics
Center, J. Struct. Funct. Genomics, 8, 99-105 (2007).
In-Geol Choi and Sung-Hou Kim, Global extent of horizontal gene transfer, Proc. Natl. Acad. Sci. U. S. A, 104,
4489-4494 (2007).
Natalia Oganesyan, Irina Ankoudinova, Sung-Hou Kim
and Rosalind Kim, Effect of osmotic stress and heat shock in
recombinant protein overexpression and crystallization, Protein Expression Purif, 52, 280-285 (2007).
Qian Steven Xu, Irina Ankoudinova, Yun Lou, Hisao Yokota, Rosalind Kim and Sung-Hou Kim, Crystal structure of
a transcriptional activator of comK gene from Bacillus halodurans, Proteins: Struct., Funct., Bioinf, 69, 409-414 (2007).
Debanu Das, Hannah Hyun, Yun Lou, Hisao Yokota, Rosalind Kim and Sung-Hou Kim, Crystal structure of a novel
single-stranded DNA binding protein from Mycoplasma
pneumoniae, Proteins: Struct., Funct., Bioinf, 67, 776-782
(2007).
Chao Zhang and Sung-Hou Kim, The impact of protein kinase structures on drug discovery, Comput. Struct. Approaches Drug Discovery, 349-365 (2008).
Sung-Hou Kim, Dong-Hae Shin, Rosalind Kim, Paul
Adams and John-Marc Chandonia, Structural genomics of
minimal organisms: pipeline and results, Methods Mol. Biol.
(Totowa, NJ, U. S.), 426, 477-496 (2008).
Young-In Chi, Monika Martick, Monica Lares, Rosalind
Kim, William G. Scott and Sung-Hou Kim, Capturing hammerhead ribozyme structures in action by modulating general
base catalysis, PLoS Biol, 6, 2060-2068 (2008).
James Tsai, John T. Lee, Weiru Wang, Jiazhong Zhang,
Hanna Cho, Shumeye Mamo, Ryan Bremer, Sam Gillette,
Jun Kong, Nikolas K. Haass, Katrin Sproesser, Ling Li, Keiran S. M. Smalley, Daniel Fong, Yong-Liang Zhu, Adhirai
Marimuthu, Hoa Nguyen, Billy Lam, Jennifer Liu, Ivana
Cheung, Julie Rice, Yoshihisa Suzuki, Catherine Luu, Calvin
Settachatgul, Rafe Shellooe, John Cantwell, Sung-Hou Kim,
Joseph Schlessinger, Kam Y. J. Zhang, Brian L. West, Ben
Powell, Gaston Habets, Chao Zhang, Prabha N. Ibrahim, Peter Hirth, Dean R. Artis, Meenhard Herlyn and Gideon Bollag, Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity, Proc. Natl. Acad.
Sci. U. S. A, 105, 3041-3046 (2008).
Ki-Chul Hwang, Ji Young Kim, Woochul Chang, DaeSung Kim, Soyeon Lim, Sang-Moon Kang, Byeong-Wook
Song, Hye-Yeong Ha, Yong Joon Huh, In-Geol Choi, DongYoun Hwang, Heesang Song, Yangsoo Jang, Namsik Chung,
Sung-Hou Kim and Dong-Wook Kim, Chemicals that modulate stem cell differentiation, Proc. Natl. Acad. Sci. U. S. A,
105, 7467-7471 (2008).
Dong Hae Shin, Michael Proudfoot, Hyo Jin Lim, In-Kyu
Choi, Hisao Yokota, Alexander F. Yakunin, Rosalind Kim
and Sung-Hou Kim, Structural and enzymatic characterization of DR1281: a calcineurin-like phosphoesterase from
Deinococcus radiodurans, Proteins: Struct., Funct., Bioinf,
70, 1000-1009 (2008).
KIRSCH, JACK F. (b.1934) Professor of the Graduated School. B.S, 1956, University of Michigan; Ph.D,
1961, Rockefeller University. Jane Coffin Childs Foundation Fellowship, 1961-1963, Brandeis University; Helen Hay Whitney Foundation Fellowship, 1963-1964,
Weizmann Institute of Science, Israel; Guggenheim Fellowship, 1971-1972. Biochemistry; Molecular Biology.
Enzymology, site-directed mutagenesis, protein folding
and stability, protein/protein interaction, directed evolution of enzymes. TEL: (510) 642-6368 FAX: (510) 6426368
Web: www.mcb.berkeley.edu/labs/kirsch/
Email: jfkirsch@berkeley.edu
Publication list has not been verified by the department.
Edgar Deu and Jack F. Kirsch, The unfolding pathway for
apo Escherichia coli aspartate aminotransferase is dependent
on the choice of denaturant, Biochemistry, 46, 5810-5818
(2007).
Edgar Deu and Jack F. Kirsch, Cofactor-directed reversible
denaturation pathways: The cofactor-stabilized Escherichia
coli aspartate aminotransferase homodimer unfolds through a
pathway that differs from that of the apoenzyme, Biochemistry, 46, 5819-5829 (2007).
Yifeng Yin and Jack F. Kirsch, Identification of functional
paralog shift mutations: conversion of Escherichia coli malate dehydrogenase to a lactate dehydrogenase, Proc. Natl.
Acad. Sci. U. S. A, 104, 17353-17357 (2007).
Kimberly A. Reynolds, Melinda S. Hanes, Jodi M. Thomson, Andrew J. Antczak, James M. Berger, Robert A. Bonomo, Jack F. Kirsch and Tracy M. Handel, Computational Redesign of the SHV-1 ␤-Lactamase/␤-Lactamase Inhibitor
Protein Interface, J. Mol. Biol, 382, 1265-1275 (2008).
Enbo Ma, Ian J. MacRae, Jack F. Kirsch and Jennifer A.
Doudna, Autoinhibition of Human Dicer by Its Internal Helicase Domain, J. Mol. Biol, 380, 237-243 (2008).
Kathryn E. Muratore, John R. Srouji, Margaret A. Chow
and Jack F. Kirsch, Recombinant expression of twelve evolutionarily diverse subfamily I␣ aminotransferases, Protein Expression Purif, 57, 34-44 (2008).
KLINMAN, JUDITH POLLOCK (b.1941) Professor of Chemistry and Professor of Molecular and Cell
Biology. A.B, 1962, University of Pennsylvania, Philadelphia; Ph.D, 1966, University of Pennsylvania, Philadelphia. Postdoctoral Fellowship, 1966-1967, Weizmann
Institute of Science, Rehovot, Israel; Postdoctoral Associate, 1968-1970, Institute for Cancer Research, Philadelphia, Pennsylvania. Enzymology. Mechanism of enzyme-catalyzed redox reactions; enzymology of neurotransmitter biosynthesis and metabolism, isotope effects
and hydrogen tunneling in enzyme-catalyzed reactions;
biogenesis and mechanism of quinoproteins. TEL: (510)
642-2668 FAX: (510) 643-6232
Web: www.cchem.berkeley.edu/~jukgrp/index.html
Email: klinman@berkeley.edu
No publication information submitted for this edition.
KRANTZ, BRYAN
7
No publication information submitted for this edition.
KURIYAN, JOHN (b.1960) Professor. B.S, 1981, Juniata College; Ph.D, 1986, M.I.T. Postdoctoral Fellow,
1986-1987, Harvard University. Dr. Kuriyan’s laboratory
carries out research in eukaryotic cellular signaling and
DNA replication. One topic concerns the mechanisms by
which the polymerases that replicate chromosomes
achieve very high speed. In other work, a structure-based
analysis of how tyrosine phosphorylation controls cell
signaling is underway. TEL: (510) 643-0137 FAX: (510)
643-2352
Web: www.jkweb.berkeley.edu
Email: kuriyan@uclink.berkeley.edu
Publication list has not been verified by the department.
Sebastian Deindl, Theresa A. Kadlecek, Tomas Brdicka,
Xiaoxian Cao, Arthur Weiss and John Kuriyan, Structural
basis for the inhibition of tyrosine kinase activity of ZAP-70,
Cell (Cambridge, MA, U. S.), 129, 735-746 (2007).
Xuewu Zhang, Kerry A. Pickin, Ron Bose, Natalia Jura,
Philip A. Cole and John Kuriyan, Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface, Nature (London, U. K.), 450, 741-744 (2007).
John Kuriyan and David Eisenberg, The origin of protein
interactions and allostery in colocalization, Nature (London,
U. K.), 450, 983-990 (2007).
Markus A. Seeliger, Bhushan Nagar, Filipp Frank, Xiaoxian Cao, M. Nidanie Henderson and John Kuriyan, c-Src
Binds to the Cancer Drug Imatinib with an Inactive Abl/c-Kit
Conformation and a Distributed Thermodynamic Penalty,
Structure (Cambridge, MA, U. S.), 15, 299-311 (2007).
Charles Olea, Elizabeth M. Boon, Patricia Pellicena, John
Kuriyan and Michael A. Marletta, Probing the function of
heme distortion in the H-NOX family, ACS Chem. Biol, 3,
703-710 (2008).
Nicholas M. Levinson, Markus A. Seeliger, Philip A. Cole
and John Kuriyan, Structural basis for the recognition of cSrc by its inactivator Csk, Cell (Cambridge, MA, U. S.), 134,
124-134 (2008).
Roxana E. Georgescu, Seung-Sup Kim, Olga Yurieva,
John Kuriyan, Xiang-Peng Kong and Mike O’Donnell, Structure of a sliding clamp on DNA, Cell (Cambridge, MA, U.
S.), 132, 43-54 (2008).
Jodi Gureasko, William J. Galush, Sean Boykevisch, Holger Sondermann, Dafna Bar-Sagi, Jay T. Groves and John
Kuriyan, Membrane-dependent signal integration by the Ras
activator Son of sevenless, Nat. Struct. Mol. Biol, 15, 452461 (2008).
Jodi Gureasko, William J. Galush, Sean Boykevisch, Holger Sondermann, Dafna Bar-Sagi, Jay T. Groves and John
Kuriyan, Membrane-dependent signal integration by the Ras
activator Son of sevenless. [Erratum to document cited in
CA148:579207], Nat. Struct. Mol. Biol, 15, 651 (2008).
Roxana E. Georgescu, Olga Yurieva, Seung-Sup Kim,
John Kuriyan, Xiang-Peng Kong and Mike O’Donnell, Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp, Proc. Natl. Acad. Sci. U. S. A, 105, 11116-11121
(2008).
LEE, YUAN TSEH (b.1936) University Professor,
Emeritus. B.S.C, 1959, National Taiwan University;
M.S, 1961, National Tsinghua University; Ph.D, 1965,
University of Calif., Berkeley. Resident Chemist, 19651967, University of California; Resident Fellow, 19671968, Harvard University. Chemical kinetics, dynamics
of chemical reactions, elementary atomic and molecular
processes, crossed molecular beam chemistry. TEL:
(510) 643-0573
Email: ytlee@gate.sinica.edu.tw
Publication list has not been verified by the department.
Ming-Hsin Li, Shang-Ting Tsai, Chung-Hsuan Chen, Chiu
Wen Chen, Yuan Tseh Lee and Yi-Sheng Wang, Bipolar Ion
Detector Based on Sequential Conversion Reactions, Anal.
Chem, 79, 1277-1282 (2007).
LEONE, STEPHEN ROBERT (b.1948) Professor.
B.A, 1970, Northwestern University; Ph.D, 1974, University of California, Berkeley. Physical Chemistry. Research interests include ultrafast laser investigations of
soft x-ray probing of valence and core levels, attosecond
physics, state-resolved collision processes and kinetics
investigations, nanoparticle chemistry, semiconductor
epitaxy and nanodot formation, nanoscale probing with
near field optical microscopy, CARS microscopy, and
neutrals imaging. TEL: (510) 643-5467 FAX: (510) 6431376
Web: www.cchem.berkeley.edu/leonegrp/
Email: srl@berkeley.edu
L. Gallmann, T. Pfeifer, P. M. Nagel, M. J. Abel, D. M.
Neumark and S. R. Leone, Comparison of the filamentation
and the hollow-core fiber characteristics for pulse compression into the few-cycle regime, Appl. Phys. B, 86, 561
(2007).
R. I. Kaiser, L. Belau, S. R. Leone, M. Ahmed, Y. Wang,
B. J. Braams and J. M. Bowman, A combined experimental
and computational study on the ionization energies of the
8
CALIFORNIA, BERKELEY
cyclic and linear C3H isomers, Chem. Phys. Chem, 8, 1236
(2007).
L. V. Stebounova, Y. E. Romanyuk, R. G. Dengel and S.
R. Leone, Size-dependent near-field coupling observed from
InN nanodots grown on nitrided sapphire, Chem. Phys. Lett,
443, 333 (2007).
L. Belau, S. E. Wheeler, B. W. Ticknor, M. Ahmed, S. R.
Leone, W. D. Allen, H. F. Schaefer III and M. A. Duncan,
Ionization thresholds of small carbon clusters: Tunable VUV
experiments and theory, J. Am. Chem. Soc, 129, 10229
(2007).
G. Meloni, T. M. Selby, F. Goulay, S. R. Leone, D. L. Osborn and C. A. Taatjes, Photoionization of 1-alkenylperoxy
and alkylperoxy radicals and a general rule for the stability of
their cations, J. Am. Chem. Soc, 129, 14019 (2007).
L. V. Stebounova, Y. E. Romanyuk, D. X. Chen and S. R.
Leone, Imaging of InGaN inhomogeneities using visible
apertureless near-field scanning optical microscope, J. Appl.
Phys, 101, 124306 (2007).
X. Dai and S. R. Leone, Control of wave packets in Li2 by
shaping the pump and probe pulses for a state-selected pumpprobe analysis of the ionization continuum, J. Chem. Phys,
127, 014312 (2007).
E. A. Torres, E. W. Lerch, X. Dai, S. Gilb and S. R. Leone,
N-level Li2 multiphoton rotational wave packets: Alignment
effects in resonant multiphoton coherent excitation, J. Chem.
Phys, 126, 044310 (2007).
K. L. Knappenberger, Jr., E. W. Lerch, P. Wen and S. R.
Leone, Stark-assisted population control of coherent CS2 4f
and 5p Rydberg wave packets studied by femtosecond timeresolved photoelectron spectroscopy, J. Chem. Phys, 127,
124318 (2007).
D. Strasser, F. Goulay and S. R. Leone, Transient photoelectron spectroscopy of the dissociative Br2(1⌸u) state, J.
Chem. Phys, 127, 184305 (2007).
Y. E. Romanyuk, R. G. Dengel, L. V. Stebounova and S.
R. Leone, Molecular beam epitaxy of InN dots on nitrided
sapphire, J. Crystal Growth, 304, 346 (2007).
C. W. Blackledge, J. M. Szarko, A. Dupont, G. H. Chan, E.
L. Read and S. R. Leone, Zinc oxide nanorod growth on gold
islands prepared by microsphere lighography on silicon and
quartz, J. Nanosci. Nanotechnol, 7, 3336 (2007).
L. Belau, K. R. Wilson, S. R. Leone and M. Ahmed, Vacuum ultraviolet (VUV) photoionization of small water clusters, J. Phys. Chem. A, 111, 10075 (2007).
D. Strasser, F. Goulay, M. S. Kelkar, E. J. Maginn and S.
R. Leone, Photoelectron spectrum of isolated ion-pairs in
ionic liquid vapor, J. Phys. Chem. A, 111, 3191 (2007).
C. Howle, A. N. Arrowsmith, V. Chikan and S. R. Leone,
State-resolved dynamics of the CN(⟩2⌺+) and CH(A2⌬) excited products resulting from the VUV photodissociation of
CH3CN, J. Phys. Chem. A, 111, 6637 (2007).
L. Belau, K. R. Wilson, S. R. Leone and M. Ahmed, Vacuum-ultraviolet photoionization studies of the microhydration
of DNA bases (guanine, cytosine, adenine, and thymine), J.
Phys. Chem. A, 111, 7562 (2007).
K. R. Wilson, S. Zou, J. Shu, E. Rühl, S. R. Leone, G. C.
Schatz and M. Ahmed, Size-dependent angular distributions
of low-energy photoelectrons emitted from NaCl nanoparticles, Nano Lett, 7, 2014 (2007).
Z. H. Kim, S. H. Ahn, B. Liu and S. R. Leone, Nanometerscale dielectric imaging of semiconductor nanoparticles:
Size-dependent dipolar coupling and contrast reversal, Nano
Lett, 7, 2258 (2007).
K. L. Knappenberger, Jr., D. B. Wong, Y. E. Romanyuk
and S. R. Leone, Excitation wavelength dependence of fluorescence intermittency in CdSe/ZnS core/shell quantum dots,
Nano Lett, 7, 3869 (2007).
T. Pfeifer, A. Jullien, M. J. Abel, P. M. Nagel, L. Gallmann, D. M. Neumark and S. R. Leone, Generating coherent
broadband continuum soft-X-ray radiation by attosecond ionization gating, Opt. Express, 15, 17120 (2007).
S. H. Lim, A. G. Caster and S. R. Leone, Fourier transform
spectral interferometric coherent anti-Stokes Raman scattering (FTSI-CARS) spectroscopy, Opt. Lett, 32, 1332 (2007).
H. Merdji, T. Auguste, W. Boutu, J. P. Caumes, B. Carré,
T. Pfeifer, A. Jullien, D. M. Neumark and S. R. Leone, Isolated attosecond pulses using a detuned second-harmonic
field, Opt. Lett, 32, 3134 (2007).
F. Goulay, D. L. Osborn, C. A. Taatjes, P. Zou, G. Meloni
and S. R. Leone, Direct detection of polyynes formation from
the reaction of ethynyl radical (C2H) with propyne (CH3C≡CH) and allene (CH2=C=CH2), Phys. Chem. Chem. Phys,
9, 4291 (2007).
Z. –H. Loh, M. Khalil, R. E. Correa, R. Santra, C. Buth
and S. R. Leone, Quantum state-resolved probing of strongfield-ionized xenon atoms using femtosecond high-order harmonic transient absorption spectroscopy, Phys. Rev. Lett, 98,
143601 (2007).
K. L. Knappenberger, Jr., D. B. Wong, W. Xu, A. M.
Schwartzberg, A. Wolcott, J. Z. Zhang and S. R. Leone, Excitation-wavelength dependence of fluorescence intermittency in CdSe nanorods, ACS Nano, 2, 2143 (2008).
A. Jullien, T. Pfeifer, M. J. Abel, P. M. Nagel, J. Bell, D.
M. Neumark and S. R. Leone, Ionization phase-match gating
for wavelength-tunable isolated attosecond pulse generation,
Appl. Phys. B, 93, 433 (2008).
Z. –H. Loh, C. H. Greene and S. R. Leone, Femtosecond
induced transparency and absorption in the extreme ultraviolet by coherent coupling of the He 2s2p (1p0) and 2p2 (1Se)
double excitation states with 800 nm light, Chem. Phys, 350,
7 (2008).
T. Pfeifer, M. J. Abel, P. M. Nagel, A. Jullien, Z.-H. Loh,
M. J. Bell, D. M. Neumark and S. R. Leone, Time-resolved
spectroscopy of attosecond quantum dynamics, Chem. Phys.
Lett, 463, 11 (2008).
V. G. Stavros and S. R. Leone, The influence of ion gratings on rotational wavepacket dynamics in H2, Chem. Phys.
Lett, 452, 33 (2008).
Y. E. Romanyuk, L. D. Kranz and S. R. Leone, Effect of
band gap on the red luminescence capability of Pr-doped InGaN layers grown by molecular beam epitaxy, J. App. Phys,
103, 073104 (2008).
Z. –H. Loh and S. R. Leone, Ultrafast strong-field dissociative ionization dynamics of CH2Br2 probed by femtosecond
soft x-ray transient absorption spectroscopy, J. Chem. Phys,
128, 204302 (2008).
E. W. Lerch, X. Dai, E. A. Torres, J. B. Ballard, H. U.
Stauffer and S. R. Leone, Manipulation of ro-vibronic wave
packet composition using chirped ultrafast laser pulses, J.
Phys. B: At. Mol. Opt. Phys, 41, 074015 (2008).
S. R. Leone, Autobiography of Stephen R. Leone, J. Phys.
Chem A, 112, 9169 (2008).
T. M. Selby, G. Meloni, F. Goulay, S. R. Leone, C. A.
Taatjes, A. Fahr and D. L. Osborn, Synchrotron photoionization mass spectrometry measurements of kinetics and product
formation in the allyl radical (H2CCHCH2) self-reaction, J.
Phys. Chem A, 112, 9366 (2008).
J. K. Song, U. Willer, J. M. Szarko, S. R. Leone, S. Li and
Y. Zhao, Ultrafast upconversion probing of lasing dynamics
in single ZnO nanowire lasers, J. Phys. Chem. C, 112, 1679
(2008).
D. Strasser, L. H. Haber, B. Doughty and S. R. Leone, Ultrafast predissociation of superexcited nitrogen molecules,
Molec. Phys, 106, 275 (2008).
Z. H. Kim and S. R. Leone, Polarization-selective mapping
of near-field intensity and phase around gold nanoparticles
using apertureless near-field microscopy, Opt. Express, 16,
1733 (2008).
Z. –H. Loh, M. Khalil, R. E. Correa and S. R. Leone, A tabletop femtosecond time-resolved soft x-ray transient absorption spectrometer, Rev. Sci. Instrum, 79, 073101 (2008).
D. L. Osborn, P. Zou, H. Johnsen, C. C. Hayden, C. A.
Taatjes, V. D. Knyazev, S. W. North, D. S. Peterka, M.
Ahmed and S. R. Leone, The multiplexed chemical kinetic
photoionization mass spectrometer: A new approach to isomer-resolved chemical kinetics, Rev. Sci. Instrum, 79,
104103 (2008).
Eliza-Beth Lerch, Designing laser pulses for the coherent
control of state-selected wave packet excitation in lithium dimer. (D)
Zhi-Heng Loh, Towards the study of ultrafast chemical dynamics using table-top femtosecond time-resolved soft x-ray
transient absorption spectroscopy. (D)
LESTER, WILLIAM ALEXANDER, JR. (b.1937)
Professor. B.S, 1958, University of Chicago; M.S, 1959,
University of Chicago; Ph.D, 1964, Catholic University
of America. Postdoctoral Associate, 1965, University of
Wisconsin, Madison, Theoretical Chemistry Institute.
Theoretical Chemistry. Quantum Monte Carlo method
for the electronic structure of molecules. TEL: (510)
643-9590 FAX: (510) 642-1088
Web: www.cchem.berkeley.edu/walgrp/
Email: WALester@lbl.gov
R. Prasad, N. Umezawa, D. Domin, R. Salomon-Ferrer and
W. A. Lester, Jr, Quantum Monte Carlo study of first-row
atoms using transcorrelated variational Monte Carlo trial
functions, J. Chem. Phys, 126, 164109 (2007).
C. Amador-Bedolla, R. Salomon-Ferrer, J. A. VazqezMartinez and W. A. Lester Jr, Reagents for electrophilic amination: A quantum Monte Carlo study, J. Chem. Phys. 126,
126, 204308 (2007).
R. Whitesides, A. C. Kollias, D. Domin, W. A. Lester, Jr.
and M. Frenklach, Graphene layer growth: Collision of migrating five-member rings, Proc. Combust. Inst, 31, 539
(2007).
D. Domin, W. A. Lester, Jr., R. Whitesides and M. Frenklach, Isomer energy differences for the C4H3 and C4H5 isomers using diffusion Monte Carlo, J. Phys. Chem. A, 112,
2065 (2008).
M. T, Nguyen, M. H. Matus, W. A. Lester, Jr. and D. A.
Dixon, Heats of formation of triplet ethylene and ethylidene,
J. Phys. Chem. A, 112, 2082 (2008).
R. Whitesides, D. Domin, R. Salomon-Ferrer, W. A. Lester, Jr. and M. Frenklach, Graphene layer growth chemistry:
Five-six-ring flip reaction, J. Phys. Chem. A, 112, 2125
(2008).
LONG, JEFFREY R. (b.1969) Associate Professor.
B.A, 1991, Cornell University; Ph.D, 1995, Harvard
University. NSF Fellowship, 1996-1997, University of
California, Berkeley. Inorganic Chemistry; Solid State
Chemistry. Synthesis of clusters and solids; structural
and functional relationships between molecular clusters
and extended solids; microporous materials; molecular
magnetism. TEL: (510) 642-0860 FAX: (510) 643-3546
Web: alchemy.cchem.berkeley.edu
Email: jrlong@berkeley.edu
Publication list has not been verified by the department.
Mircea Dinca, Won Seok Han, Yun Liu, Anne Dailly,
Craig M. Brown and Jeffrey R. Long, Observation of Cu2+H2 interactions in a fully desolvated sodalite-type metal-organic framework, Angew. Chem., Int. Ed, 46, 1419-1422
(2007).
Eric J. Welch and Jeffrey R. Long, Synthesis and ligandexchange kinetics of the solvated trigonal-prismatic clusters
[W6CCl12L6]2+ (L = dmf, py), Angew. Chem., Int. Ed, 46,
3494-3496 (2007).
Steven S. Kaye and Jeffrey R. Long, The role of vacancies
in the hydrogen storage properties of Prussian blue analogues, Catal. Today, 120, 311-316 (2007).
T. David Harris and Jeffrey R. Long, Linkage isomerism in
a face-centered cubic Cu6Cr8(CN)24 cluster with an S = 15
ground state, Chem. Commun. (Cambridge, U. K.), 13601362 (2007).
Steven S. Kaye and Jeffrey R. Long, Hydrogen adsorption
in dehydrated variants of the cyano-bridged framework compounds A2Zn3[Fe(CN)6]2·xH2O (A = H, Li, Na, K, Rb),
Chem. Commun. (Cambridge, U. K.), 4486-4488 (2007).
Kannan Ramaswamy, Eric G. Tulsky, Jeffrey R. Long, Jeff
L.-F. Kao and Sophia E. Hayes, Determination of 77Se-77Se
and 77Se-13C J-Coupling Parameters for the Clusters
[Re5OsSe8(CN)6]3- and [Re4Os2Se8(CN)6]2-, Inorg. Chem, 46,
1177-1186 (2007).
Long Jiang, Hye Jin Choi, Xiao-Long Feng, Tong-Bu Lu
and Jeffrey R. Long, Syntheses, Structures, and Magnetic
Properties of the Face-Centered Cubic Clusters
[Tp8(H2O)12M6Fe8(CN)24]4+ (M = Co, Ni), Inorg. Chem.
(Washington, DC, U. S.), 46, 2181-2186 (2007).
Stosh A. Kozimor, Bart M. Bartlett, Jeffrey D. Rinehart
and Jeffrey R. Long, Magnetic Exchange Coupling in Chloride-Bridged 5f-3d Heterometallic Complexes Generated via
Insertion into a Uranium(IV) Dimethylpyrazolate Dimer, J.
Am. Chem. Soc, 129, 10672-10674 (2007).
Mircea Dinca and Jeffrey R. Long, High-Enthalpy Hydrogen Adsorption in Cation-Exchanged Variants of the Microporous
Metal-Organic
Framework
Mn3[
(Mn4Cl)3(BTT)8(CH3OH)10]2, J. Am. Chem. Soc, 129, 1117211176 (2007).
Steven S. Kaye, Anne Dailly, Omar M. Yaghi and Jeffrey
R. Long, Impact of Preparation and Handling on the Hydrogen Storage Properties of Zn4O(1,4-benzenedicarboxylate)3
(MOF-5), J. Am. Chem. Soc, 129, 14176-14177 (2007).
Mircea Dinca and Jeffrey R. Long, Hydrogen storage in
microporous metal-organic frameworks with exposed metal
sites, Angew. Chem., Int. Ed, 47, 6766-6779 (2008).
Mircea Dinca, Anne Dailly, Charlene Tsay and Jeffrey R.
Long, Expanded Sodalite-Type Metal-Organic Frameworks:
Increased Stability and H2 Adsorption through Ligand-Directed Catenation, Inorg. Chem. (Washington, DC, U. S.), 47,
11-13 (2008).
Jeffrey D. Rinehart, Bart M. Bartlett, Stosh A. Kozimor
and Jeffrey R. Long, Ferromagnetic exchange coupling in the
linear, chloride-bridged cluster (cyclam)CoII[(␮-Cl)UIV
(Me2Pz)4]2, Inorg. Chim. Acta, 361, 3534-3538 (2008).
Danna E. Freedman, David M. Jenkins, Anthony T. Iavarone and Jeffrey R. Long, A Redox-Switchable Single-Molecule Magnet Incorporating [Re(CN)7]3-, J. Am. Chem. Soc,
130, 2884-2885 (2008).
Satoshi Horike, Mircea Dinca, Kentaro Tamaki and Jeffrey
R. Long, Size-Selective Lewis Acid Catalysis in a Microporous Metal-Organic Framework with Exposed Mn2+ Coordination Sites, J. Am. Chem. Soc, 130, 5854-5855 (2008).
Hye Jin Choi, Mircea Dinca and Jeffrey R. Long, Broadly
Hysteretic H2 Adsorption in the Microporous Metal-Organic
Framework Co(1,4-benzenedipyrazolate), J. Am. Chem. Soc,
130, 7848-7850 (2008).
Steven S. Kaye and Jeffrey R. Long, Matrix Isolation
Chemistry in a Porous Metal-Organic Framework: Photochemical Substitutions of N2 and H2 in Zn4O[(␩6-1,4Benzenedicarboxylate)Cr(CO)3]3, J. Am. Chem. Soc, 130,
806-807 (2008).
Daniel Wegner, Ryan Yamachika, Yayu Wang, Victor W.
Brar, Bart M. Bartlett, Jeffrey R. Long and Michael F. Crommie, Single-Molecule Charge Transfer and Bonding at an Organic/Inorganic Interface: Tetracyanoethylene on Noble Metals, Nano Lett, 8, 131-135 (2008).
MAJDA, MARCIN M. (b.1951) Professor. M.Sc,
1974, Warsaw University; Ph.D, 1980, Southern Illinois
University at Carbondale. Postdoctoral Associate, 19801982, University of Illinois. Analytical Chemistry; Electrochemistry. Dynamic phenomena in monomolecular
films at the air/water interface. Dynamic properties of
water in the aqueous liquid-vapor interfacial region. Ion
diffusion in complex media. DNA and protein microsensors. TEL: (510) 642-8961 FAX: (510) 642-0269
Web: www.cchem.berkeley.edu/~mmmgrp/
Email: majda@berkeley.edu
No publication information submitted for this edition.
MARKOWITZ, SAMUEL SOLOMON (b.1931)
Professor Emeritus and Faculty Senior Scientist, Lawrence Berkeley National Laboratory. B.S, 1953, Rensselaer Polytechnic Institute; M.A, 1955, Princeton University; Ph.D, 1957, Princeton University and Brookhaven
CALIFORNIA, BERKELEY
National Laboratory (Thesis Research Student). NSF
Fellowship, 1957-1958, University of Birmingham, England; NSF Senior Fellowship, 1964-1965, Faculte des
Sciences de l’Universite de Paris, Orsay, France; Visiting Scientist, 1973-1974, Weizmann Institute of Science,
Isotopes Department, Rehovot, Israel. Environmental
Chemistry; Nuclear Chemistry. Nuclear reactions for environmental studies of low-Z elements; oxidation of nitrogen and sulfur compounds with catalysis by carbon
particles in aqueous media; chemistry of atmospheric
aerosols; and smoke-aerosols. High-energy nuclear reactions; nuclear reactions induced by He-3 ions. NucleoGenesis and the Origin(s) of Life. TEL: (510) 642-2922
FAX: (510) 642-8369
Email: markowit@cchem.berkeley.edu
No publication information submitted for this edition.
MARLETTA, MICHAEL A. (b.1951) Aldo DeBenedictis Distinguished Professor of Chemistry. A.B, 1973,
SUNY Fredonia; Ph.D, 1978, UCSF. Postdoctoral Fellow, 1978-1980, M.I.T. Chemical Biology. Nitric oxide
and oxygen signaling; parasitic metabolic pathways; metalloprotein function; mechanistic enzymology. TEL:
(510) 666-2763 FAX: (510) 666-2765
Web: www.cchem.berkeley.edu/~mmargrp/index.html
Email: marletta@berkeley.edu
Mark S. Price, Lily Y. Chao and Michael A. Marletta, Shewanella oneidensis MR-1 H-NOX Regulation of a Histidine
Kinase by Nitric Oxide, Biochemistry, 46, 13677-13683
(2007).
Shirley H. Huang, Donald C. Rio and Michael A. Marletta,
Ligand Binding and Inhibition of an Oxygen-Sensitive Soluble Guanylate Cyclase, Gyc-88E, from Drosophila, Biochemistry, 46, 15115-15122 (2007).
Nathaniel I. Martin, Emily R. Derbyshire and Michael A.
Marletta, Synthesis and evaluation of a phosphonate analogue of the soluble guanylate cyclase activator YC-1, Bioorg. Med. Chem. Lett, 17, 4938-4941 (2007).
Nathaniel I. Martin, Joshua J. Woodward, Michael B. Winter, William T. Beeson and Michael A. Marletta, Design and
Synthesis of C5 Methylated L-Arginine Analogues as Active
Site Probes for Nitric Oxide Synthase, J. Am. Chem. Soc,
129, 12563-12570 (2007).
Emily R. Derbyshire and Michael A. Marletta, Butyl Isocyanide as a Probe of the Activation Mechanism of Soluble
Guanylate Cyclase: investigating the role of non-heme nitric
oxide, J. Biol. Chem, 282, 35741-35748 (2007).
Jonathan A. Winger, Emily R. Derbyshire and Michael A.
Marletta, Dissociation of Nitric Oxide from Soluble Guanylate Cyclase and Heme-Nitric Oxide/Oxygen Binding Domain
Constructs, J. Biol. Chem, 282, 897-907 (2007).
J. J. Woodward, N. I. Martin and M. A. Marletta, An Escherichia coli expression-based method for heme substitution,
Nature Methods, 4, 43-45 (2007).
Douglas A. Mitchell, Thomas Michel and Michael A. Marletta, Effects of S-nitrosation of nitric oxide synthase, Nitric
Oxide, 151-179 (2007).
Douglas A. Mitchell, Sarah U. Morton, Nathaniel B. Fernhoff and Michael A. Marletta, Thioredoxin is required for Snitrosation of procaspase-3 and the inhibition of apoptosis in
Jurkat cells, Proc. Natl. Acad. Sci. U. S. A, 104, 11609-11614
(2007).
E. R. Derbyshire and M. A. Marletta, Biological targets of
nitric oxide, Wiley Encyclopedia of Chemical Biology,
(2007).
Charles Olea, Elizabeth M. Boon, Patricia Pellicena, John
Kuriyan and Michael A. Marletta, Probing the function of
heme distortion in the H-NOX family, ACS Chem. Biol, 3,
703-710 (2008).
L. Y. Chao, J. Rine and M. A. Marletta, Spectroscopic and
kinetic studies of Nor1, a cytochrome P450 nitric oxide reductase from the fungal pathogen Histoplasma capsulatum,
Arch. Biochem. Biophys, 480, 132-137 (2008).
Emily R. Derbyshire, Alexander Gunn, Mohammed Ibrahim, Thomas G. Spiro, R. David Britt and Michael A. Marletta, Characterization of Two Different Five-Coordinate Soluble Guanylate Cyclase Ferrous-Nitrosyl Complexes, Biochemistry, 47, 3892-3899 (2008).
Lily Y. Chao, Michael A. Marletta and Jasper Rine, Sre1,
an iron-modulated GATA DNA-binding protein of iron-uptake genes in the fungal pathogen Histoplasma capsulatum,
Biochemistry, 47, 7274-7283 (2008).
J. A. Winger, E. R. Derbyshire, M. H. Lamers, M. A. Marletta and J. Kuriyan, The crystal structure of the catalytic domain of a eukaryotic guanylate cyclase, BMC Struct Biol, 8,
42 (2008).
J. J. Woodward, M. M. Chang, N. I. Martin and M. A.
Marletta, Evidence for a ferric-peroxo intermediate as the active oxidant in the second step of nitric oxide synthase catalysis, J. Amer. Chem. Soc, 131, 297-305 (2008).
Nathaniel I. Martin, William T. Beeson, Joshua J. Woodward and Michael A. Marletta, NG-Aminoguanidines from
primary amines and the preparation of nitric oxide synthase
inhibitors, J. Med. Chem, 51, 924-931 (2008).
Henry H. Chang, Arnold M. Falick, Peter M. Carlton, John
W. Sedat, Joseph L. DeRisi and Michael A. Marletta, N-terminal processing of proteins exported by malaria parasites,
Mol. Biochem. Parasitol, 160, 107-115 (2008).
MATHIES, RICHARD ALFRED (b.1946) Professor of Chemistry. B.S, 1968, University of Washington,
Seattle; M.S, 1970, Cornell University, Ithaca, NY;
Ph.D, 1974, Cornell University, Ithaca, NY. Helen Hay
Whitney Foundation Postdoctoral Fellowship, 19741976, Yale University; Alfred P. Sloan Foundation Research Fellow, 1979-1981, University of California,
Berkeley. Analytical Chemistry; Biophysics/Biophysical
Chemistry. Spectroscopic studies of excited-state structure and femtosecond dynamics in photochemical and
photobiological reactions; time-resolved resonance Raman spectroscopy; energy and information transduction
in rhodopsins; development of microfabricated “Lab-ona-chip” analysis systems for DNA sequencing, pathogen
detection, genotyping and forensic analysis; development
of microfabricated in situ biomarker analyzers for planetary exploration. TEL: (510) 642-4192 FAX: (510) 6423599
Web: www.cchem.berkeley.edu/ramgrp/
Email: ramathies@berkeley.edu
Peng Liu, T. S. Seo, N. Beyor, K. Shin, J. R. Scherer and
R. A. Mathies, Integrated portable PCR-capillary electrophoresis microsystem for rapid forensic short tandem repeat typing, Anal. Chem, 79, 1881-1889 (2007).
Robert G. Blazej, P. Kumaresan, S. A. Cronier and R. A.
Mathies, In-line injection microdevice for attomole-scale
Sanger DNA sequencing, Anal. Chem, 79, 4499-4506 (2007).
Charles A. Emrich, I. L. Medintz, W. K. Chu and R. A.
Mathies, Microfabricated two-dimensional electrophoresis
device for differential protein expression profiling, Anal.
Chem, 79, 7360-7366 (2007).
Christine N. Jayarajah, A. M. Skelley, A. Fortner and R. A.
Mathies, Analysis of neuroactive amines in fermented beverages using a portable microchip capillary electrophoresis system, Anal. Chem, 79, 8162-8169 (2007).
Nicholas M. Toriello, C. N. Liu, R. G. Blazej, N. Thaitrong
and R. A. Mathies, Integrated affinity capture, purification
and capillary electrophoresis microdevice for quantitative
double-stranded DNA analysis, Anal. Chem, 79, 8549-8556
(2007).
Philipp Kukura, David W. McCamant and Richard A. Mathies, Femtosecond stimulated Raman spectroscopy, Ann.
Rev. Phys. Chem, 58, 461-488 (2007).
Adeyemi A. Adesokan, D. Pan, E. Fredj, R. A. Mathies
and R. B. Gerber, Anharmonic vibrational calculations modeling the Raman spectra of intermediates in the protein
(PYP) photocycle, J. Amer. Chem. Soc, 129, 4584-4594
(2007).
Renee R. Frontiera and R. A. Mathies, Polarization dependence of vibrational coupling signals in femtosecond stimulated Raman spectroscopy, J. Chem. Phys, 127, 124501
(2007).
Alison M. Skelley, A. D. Aubrey, P. A. Willis, X. Amashukeli, P. Ehrenfreund, J. L. Bada, F. J. Grunthaner and
Richard A. Mathies, Organic amine biomarker detection in
the Yungay region of the Atacama Desert with the Urey Instrument, J. Geophys. Res, 112, G04S11 (2007).
Erik C. Jensen, W. H. Grover and R. A. Mathies, Micropneumatic digital logic structures for integrated microdevice
computation and control, J. of Microelectromechanical Systems, 16, 1378-1385 (2007).
Christina M. Stuart, M. J. Tauber and R. A. Mathies, Structure and dynamics of the solvated electron in alcohols from
resonance Raman spectroscopy, J. Phys. Chem, 111, 83908400 (2007).
C. M. Stuart, R. R. Frontiera and R. A. Mathies, Excited
state structure and dynamics of cis-and trans-azobenzene
from resonance Raman intensity analysis, J. Phys. Chem. A,
111, 12072-12080 (2007).
Emory M. Chan, M. A. Marcus, S. Fakra, M. S. Elnaggar,
R. A. Mathies and A. P. Alivisatos, Millisecond kinetics of
nanocrystal cation exchange using microfluidic X-ray absorption spectroscopy, J. Phys. Chem. A, 111, 12210-12215
(2007).
Erik S. Douglas, R. A. Chandra, C. R. Bertozzi and R. A.
Mathies, Self-assembled cellular microarrays patterned using
DNA barcodes, Lab-on-a-Chip, 7, 1442-1448 (2007).
S. A. Greenspoon, S. H. I. Yeung, J. D. Ban and R. A. Mathies, Microchip capillary electrophoresis: Progress toward
an integrated forensic analysis system, Profiles in DNA, 10,
16-18 (2007).
Palani Kumaresan, C. J. Yang, S. A. Cronier, R. G. Blazej
and R. A. Mathies, High-throughput single copy DNA amplification and cell analysis in engineered nanoliter droplets,
Anal. Chem, 80, 3522-3529 (2008).
Andrew D. Aubrey, J. H. Chalmers, J L. Bada, F. J. Grunthaner, X. Amashukeli, P. Willis, A. M. Skelley, R. A. Mathies, R. C. Quinn, A. P. Zent, P. Ehrenfreund, R. Amundson,
D. P. Glavin, O. Botta, L. Barron, D. L. Blaney, B. C. Clark,
M. Coleman, B. A. Hoffmann, J-L Josset, P. Rettberg, S.
Ride, R. Robert, M. A. Sephton and A. Yen, The Urey Instrument: An advanced in situ organic and oxidant detector
for Mars exploration, Astrobiology, 8, 883-595 (2008).
Nathaniel Beyor, T. S. Seo and R. A. Mathies, Immunomagnetic bead-based cell concentration microdevice for dilute pathogen detection, Biomedical Microdevices, 10, 909917 (2008).
Sangdeok Shim, C. M. Stuart and R. A. Mathies, Resonance Raman cross-sections and vibronic analysis of Rhoda-
9
mine 6G from broadband stimulated Raman spectroscopy,
ChemPhysChem, 9, 697-699 (2008).
S. H. I. Yeung, I. L. Medintz, S. A. Greenspoon and R. A.
Mathies, Rapid determination of monozygous twinning with
a microfabricated capillary array electrophoresis genetic
analysis device, Clinical Chemistry, 54, 1080-1084 (2008).
Stephanie H. I. Yeung, T. S. Seo, C. A. Crouse, S. A.
Greenspoon, T. N. Chiesl, J. D. Ban and R. A. Mathies, Fluorescence energy-transfer labeled primers for high-performance forensic DNA profiling, Electrophoresis, 29, 22512259 (2008).
P. Liu, S. H. I. Yeung, K. A. Crenshaw, C. A. Crouse, J. R.
Scherer and R. A. Mathies, Real time forensic DNA analysis
at a crime scene with a portable microchip analyzer, Forensic
Science International: Genetics, 2, 301-309 (2008).
Amanda L. Smeigh, M. Creelman, R. A. Mathies and J. K.
McCusker, Femtosecond time- resolved optical and Raman
spectroscopy of photo-induced spin-crossover: Temporal resolution of low spin-to-high spin optical switching, J. Amer.
Chem. Soc, 130, 14015-14017 (2008).
R. R. Frontiera, S. Shim and R. A. Mathies, Origin of negative and dispersive features in anti-stokes and resonance raman spectroscopy, J. Chem. Phys, 129, 064507 (2008).
S. Shim and R. A. Mathies, Development of a tunable femtosecond stimulated Raman apparatus and its application to
ß-carotene, J. Phys. Chem. B, 112, 4826-4832 (2008).
Susan A. Greenspoon, S. H. I. Yeung, K. R. Johnson, B. S.
Chu, H. N. Rhee, A. B. McGuckian, C. A. Crouse, T. N.
Chiesl, A. E. Barron, J. R. Scherer, J. D. Ban and R. A. Mathies, A forensic laboratory tests the Berkeley microfabricated capillary array electrophoresis device, Journal of Forensic
Sciences, 53, 828-837 (2008).
S. Shim and R. A. Mathies, Femtosecond Raman-induced
Kerr effect spectroscopy, Journal of Raman Spectroscopy,
39, 1526-1530 (2008).
Nicholas M. Toriello, E. S. Douglas, N. Thaitrong, S. C.
Hsiao, M. B. Francis, C. R. Bertozzi and R. A. Mathies, Integrated microfluidic bioprocessor for single cell gene expression analysis, PNAS, 105, 20173-2017 (2008).
Jeffrey L. Bada, P. Ehrenfreund, F. J. Grunthaner, D. Blaney, M. Coleman, A. Farrington, A. Yen, R. A. Mathies, R.
Amundson, R. Quinn, A. Zent, S. Ride, L. Barron, O. Botto,
B. Clark, D. Glavin, B. Hoffman, J. L. Fosset, P. Rettberg, F.
Robert and M. Sephton, Urey: Mars organic and oxidant detector, Space Science Reviews, 135, 269-279 (2008).
Jessica A. James, The journey toward forensic utilization
of microchip technology: Affinity gel-phase capture purification and microcapillary gel electrophoresis of forensic short
tandem repeat polymerase chain reaction samples. (M)
Christina Marie Stuart, Excited state structure and dynamics from resonance Raman intensity analysis: Solvated electrons in alcohols, Cis- and Trans-azobenzene and Rodamine
6G. (D)
Chung N. Liu, Development of a high-throughput and fully
integrated bioanalytical microdevice for genetic analysis. (D)
Nathaniel Beyor, Microdevices for pathogen detection. (D)
Nicholas M. Toriello, Integrated microfluidic devices and
methods for gene expression and cellular analysis. (D)
Palani Kumaresan, Integrated microfluidic devices for
DNA sequencing and single molecule/cell genetic analysis.
(D)
Stephanie Hang Ieng Yeung, Advancing forensic DNA
profiling through microchip technology. (D)
MILLER, WILLIAM HUGHES (b.1941) Kenneth
S. Pitzer Distinguished Professor of Chemistry. B.S,
1963, Georgia Inst. Technology; A.M, 1964, Harvard
University; Ph.D, 1967, Harvard University. NATO Fellow, 1967-1968, Freiburg University; Junior Fellow,
1967-1969, Harvard University. Chemical Physics; Theoretical Chemistry. Physical chemistry; theoretical
chemistry. Quantum theory of chemical reaction dynamics; semiclassical approximations to quantum mechanics;
inelastic and reactive scattering theory; quantum corrections for classical molecular dynamics simulations. TEL:
(510) 642-0653 FAX: (510) 642-6262
Web: www.cchem.berkeley.edu/millergrp/
Email: millerwh@berkeley.edu
Nandini Ananth, Charulatha Venkataraman and William
H. Miller, Semiclassical (SC) description of electronically
non-adiabatic dynamics via the initial value representation
(IVR), J. Chem. Phys, 127, 084114.1-9 (2007).
Charulatha Venkataraman and William H. Miller, Chemical reaction rates using the semiclassical Van-Vleck initial
value representation, J. Chem. Phys, 126, 094104.1-8 (2007).
Jiri Vanicek and William H. Miller, Efficient estimators
for quantum instanton evaluation of the kinetic isotope effects: Application to the intramolecular hydrogen transfer in
pentadiene, J. Chem. Phys, 127, 114309.1-9 (2007).
Jian Liu and William H. Miller, Linearized semiclassical
initial value time correlation functions using the thermal
Gaussian approximation: Applications to condensed phase
systems, J. Chem. Phys, 127, 114506.1-10 (2007).
Jian Liu and William H. Miller, Real time correlation function in a single phase space integral—beyond the linearized
semiclassical initial value representation, J. Chem. Phys, 126,
234110.1-11 (2007).
William H. Miller, The initial value representation of semiclassical theory: A practical way for adding quantum effects
10
CALIFORNIA, BERKELEY
to classical molecular dynamics simulations of complex molecular systems, in physical biology – from atoms to medicine, Imperial College Press, London, UK, 505-525 (2008).
Jian Liu and William H. Miller, Linearized semiclassical
initial value time correlation functions with maximum entropy analytic continuation, J. Chem. Phys, 129, 124111.1-17
(2008).
Jian Liu and William H. Miller, Test of the consistency of
various linearized semiclassical initial value time correlation
functions in application to inelastic neutron scattering from
liquid para-hydrogen, J. Chem. Phys, 128, 144511.1-15
(2008).
Charulatha Venkataraman, Dynamics from the semiclassical perspective. (D)
Michael S. Small, The open semiclassical approximation to
the density matrix and its application to the Wigner function.
(D)
Nandini Ananth, Quantum dynamical behaviour in complex systems — a semiclassical approach. (D)
MORETTO, LUCIANO G. (b.1940) Professor.
Ph.D, 1964, University of Pavia, Italy. Postdoctoral Fellow, 1966-1968, Lawarence Berkeley National Laboratory. TEL: (510) 486-5510 FAX: (510) 642-9675
Email: moretto@lbl.gov
No publication information submitted for this edition.
MYERS, ROLLIE JOHN (b.1924) Professor of
Chemistry, Emeritus. B.S, 1947, California Institute of
Technology; M.S, 1948, California Institute of Technology; Ph.D, 1951, University of California, Berkeley. Solution chemistry and ultraviolet spectroscopy; paramagnetic resonance of free radicals and transition metal complexes; nuclear magnetic resonance. TEL: (510) 6422832 FAX: (510) 642-8369
Email: myers@cchem.berkeley.edu
No publication information submitted for this edition.
NEUMARK, DANIEL M. (b.1955) Professor. B.A,
1977, Harvard University; M.A, 1977, Harvard University; Ph.D, 1984, University of California, Berkeley. Postdoctoral Fellowship, 1984-1986, University of Colorado,
Joint Institute for Laboratory Astrophysics. Physical
Chemistry. Studies of transition states, reactive intermediates, and clusters via negative ion photodetachment;
photodissociation and bimolecular chemistry of reactive
free radicals; time resolved studies of dynamics in ions;
photoelectron spectroscopy of helium droplets; development of femtosecond and attosecond light sources in soft
x-ray regime. TEL: (510) 642-3502 FAX: (510) 6423635
Web: www.bromine.cchem.berkeley.edu
Email: dneumark@berkeley.edu
Jia Zhou, Etienne Garand, Wolfgang Eisfeld and Daniel M.
Neumark, Slow electron velocity-map imaging spectroscopy
of the 1-propynyl radical, J. Chem. Phys, 127, 034304/1034304/7 (2007).
Yifat Miller, Galina M. Chaban, Jia Zhou, Knut R. Asmis,
Daniel M. Neumark and R. Benny Gerber, Vibrational spectroscopy of (SO24-)·(H2O)n clusters, n=1-5: Harmonic and anharmonic calculations and experiment, J. Chem. Phys, 127,
094305/1-094305/11 (2007).
David E. Szpunar, Ann Elise Faulhaber, Kathryn E. Kautzman, Paul E. Crider, II and Daniel M. Neumark, D atom loss
in the photodissociation of the DNCN radical: Implications
for prompt NO formation, J. Chem. Phys, 126, 114311/1114311/6 (2007).
Jia Zhou, Etienne Garand and Daniel M. Neumark, Vibronic structure in C2H and C2D from anion slow electron
velocity-map imaging spectroscopy, J. Chem. Phys, 127,
114313/1-114313/9 (2007).
Jia Zhou, Etienne Garand and Daniel M. Neumark, Slow
electron velocity-map imaging spectroscopy of the C4H- and
C4D- anions, J. Chem. Phys, 127, 154320/1-154320/7 (2007).
Knut R. Asmis, Gabriele Santambrogio, Jia Zhou, Etienne
Garand, Jeffrey Headrick, Daniel Goebbert, Mark A. Johnson
and Daniel M. Neumark, Vibrational spectroscopy of hydrated electron clusters (H2O)-15-50 via infrared multiple photon
dissociation, J. Chem. Phys, 126, 191105/1-191105/5 (2007).
Aster Kammrath, Graham B. Griffin, Jan R. R. Verlet,
Ryan M. Young and Daniel M. Neumark, Time-resolved
photoelectron imaging of large anionic methanol clusters:
(Methanol)n-(n≈145-535), J. Chem. Phys, 126, 244306/1244306/6 (2007).
Kathryn E. Kautzman, Paul E. Crider, David E. Szpunar
and Daniel M. Neumark, Dissociative Photodetachment
Studies of I2-·Ar: Coincident Imaging of Two- and ThreeBody Product Channels, J. Phys. Chem. A, 111, 12795-12801
(2007).
Darcy S. Peterka, Jeong Hyun Kim, Chia C. Wang, Lionel
Poisson and Daniel M. Neumark, Photoionization Dynamics
in Pure Helium Droplets, J. Phys. Chem. A, 111, 7449-7459
(2007).
Thomas Pfeifer, Aurelie Jullien, Mark J. Abel, Phillip M.
Nagel, Lukas Gallmann, Daniel M. Neumark and Stephen R.
Leone, Generating coherent broadband continuum soft-x-ray
radiation by attosecond ionization gating, Optics Express, 15,
17120-17128 (2007).
Hamed Merdji, Thierry Auguste, Wilem Boutu, J. Pascal
Caumes, Bertrand Carre, Thomas Pfeifer, Aurelie Jullien,
Daniel M. Neumark and Stephen R. Leone, Isolated attosecond pulses using a detuned second-harmonic field, Optics
Letters, 32, 3134-3136 (2007).
Bradley F. Parsons, Sean M. Sheehan, Terry A. Yen, Daniel M. Neumark, Nadine Wehres and Rainer Weinkauf, Anion photoelectron imaging of deprotonated thymine and cytosine, Phys. Chem. Chem. Phys, 9, 3291-3297 (2007).
Bradley F. Parsons, Sean M. Sheehan, Terry A. Yen, Daniel M. Neumark, Nadine Wehres and Rainer Weinkauf, Anion photoelectron imaging of deprotonated thymine and cytosine. [Erratum to document cited in CA147:211451], Phys.
Chem. Chem. Phys, 9, 3790 (2007).
Lukas Gallmann, Thomas Pfeifer, Mark J. Abel, Phillip M.
Nagel, Daniel M. Neumark and Stephen R. Leone, Direct
comparison of the hollow-core fiber and filamentation techniques for few-cycle pulse generation, Springer Ser. Chem.
Phys, 88, 92-94 (2007).
Aurelie Jullien, Thomas Pfeifer, Mark J. Abel, Philip M.
Nagel, M. Justine Bell, Daniel M. Neumark and Stephen R.
Leone, Ionization phase-match gating for wavelength-tunable
isolated attosecond pulse generation, Appl. Phys. B, 93, 433442 (2008).
Graham B. Griffin, Aster Kammrath, Oli T. Ehrler, Ryan
M. Young, Ori Cheshnovsky and Daniel M. Neumark, Auger
recombination dynamics in Hg13- clusters, Chem. Phys, 350,
69-74 (2008).
Thomas Pfeifer, Mark J. Abel, Phillip M. Nagel, Aurelie
Jullien, Zhi-Heng Loh, M. Justine Bell, Daniel M. Neumark
and Stephen R. Leone, Time-resolved spectroscopy of attosecond quantum dynamics, Chem. Phys. Lett, 463, 11-24
(2008).
Sean M. Sheehan, Bradley F. Parsons, Jia Zhou, Etienne
Garand, Terry A. Yen, David T. Moore and Daniel M. Neumark, Characterization of cyclic and linear C3H- and C3H via
anion photoelectron spectroscopy, J. Chem. Phys, 128,
034301/1-034301/13 (2008).
Etienne Garand, Tara I. Yacovitch and Daniel M. Neumark, Slow photoelectron imaging spectroscopy of CCO- and
CCS-, J. Chem. Phys, 129, 074312/1-074312/8 (2008).
Scott J. Goncher, David T. Moore, Niels E. Sveum and
Daniel M. Neumark, Photofragment translational spectroscopy of propargyl radicals at 248 nm, J. Chem. Phys, 128,
114303/1-114303/8 (2008).
Sean M. Sheehan, Bradley F. Parsons, Terry A. Yen, Michael R. Furlanetto and Daniel M. Neumark, Anion photoelectron spectroscopy of C5H-, J. Chem. Phys, 128, 174301/
1-174301/9 (2008).
Daniel M. Neumark, Slow electron velocity-map imaging
of negative ions: Applications to spectroscopic and dynamics, J. Phys. Chem, 112, 13287-13301 (2008).
Chia C. Wang, Oleg Kornilov, Oliver Gessner, Jeong
Hyun Kim, Darcy S. Peterka and Daniel M. Neumark, Photoelectron Imaging of Helium Droplets Doped with Xe and Kr
Atoms, J. Phys. Chem. A, 112, 9356-9365 (2008).
Daniel M. Neumark, Spectroscopy and dynamics of excess
electrons in clusters, Mol. Phys, 106, 2183-2197 (2008).
Etienne Garand, Daniel Goebbert, Gabriele Santambrogio,
Ewald Janssens, Peter Lievens, Gerard Meijer, Daniel M.
Neumark and Knut R. Asmis, Vibrational spectra of small
silicon monoxide cluster cations measured by infrared multiple photon dissociation spectroscopy, Phys. Chem. Chem.
Phys, 10, 1502-1506 (2008).
Etienne Garand, Jia Zhou, David E. Manolopoulos, Millard
H. Alexander and Daniel M. Neumark, Nonadiabatic interactions in the Cl + H2 reaction probed by ClH2- and ClD2- photoelectron imaging. [Erratum to document cited in CA148:
317712], Science (Washington, DC, U. S.), 320, 612 (2008).
Etienne Garand, Jia Zhou, David E. Manolopoulos, Millard
H. Alexander and Daniel M. Neumark, Nonadiabatic Interactions in the Cl + H2 Reaction Probed by ClH2- and ClD2- Photoelectron Imaging, Science (Washington, DC, U. S.), 319,
72-75 (2008).
Aster Kammrath, Time-resolved photoelectron imaging of
anionic clusters dynamics. (D)
Chia Wang, Photoionization dynamics of doped helium nanadroplets. (D)
Jia Zhou, Slow-electron velocity-map imaging spectroscopy of small radicals and infrared multiphoton dissociation
study of solvated systems. (D)
Kathryn Kautzman, Fast beam photodissociation studies of
small molecules by time-and position_senstive coincident
imaging. (D)
Scott Goncher, Studies of photofragment translational
spectroscopy. (D)
Sean Sheehan, Anion photoelectron spectroscopy of small
clusters. (D)
NITSCHE, HEINO (b.1949) Professor. Dipl.-Chem,
1976, Free University Berlin; Dr.rer.nat, 1980, University Berlin. Nuclear Chemistry; Physical Chemistry.
Chemistry and nuclear properties of the heaviest elements: Syntheses of new elements and isotopes; chemistry of elements 104 (Rf) to 109(Mt)and 112. Fundamental research on actinides: Solution thermodynamics, kinetics and solid/solution interfacial reactions on iron and
manganese oxides. Fundamental environmental behavior
of the actinides and other radionuclides: Interaction with
inorganic and organic groundwater ligands, minerals,
and microorganisms. TEL: (510) 486-5615 FAX: (510)
486-7444
Web: www.cchem.berkeley.edu/~chemgrad/faculty/
nitsche.html
Email: hnitsche@cchem.berkeley.edu
HNitsche@lbl.gov
Publication list has not been verified by the department.
Mitch Andre Garcia, Mazhar Nawaz Ali, Tashi ParsonsMoss, Paul David Ashby and Heino Nitsche, Metal oxide
films produced by polymer-assisted deposition (PAD) for nuclear science applications, Thin Solid Films, 516, 6261-6265
(2008).
O’KONSKI, CHESTER THOMAS (b.1921) Professor Emeritus. B.S, 1942, University of Wisconsin; M.S,
1946, Northwestern University; Ph.D, 1948, Northwestern University. Guggenheim, 1955, University of Leidon; Knapp Memorial, 1958, University of Wisconsin;
Miller-Sci Found, 1960, University of California, Berkeley; NIH Fellowship, 1962-1963, Princeton University,
Harvard University; Nobel Guest Prof, 1970, Uppsala
University; Kerg Medal, 1991, Inter. Committee for Molecular Electro-optics. Dynamical electro-optic researches on macromolecules in solution, mostly proteins
and DNA in aqueous solution. Spectroscopic experiments and theory of ion channels (esp., the acetylcholine
receptor) of nerve membrane. Biophysics. TEL: (510)
642-3654 FAX: (510) 642-8369
Email: okonski@cchem.berkeley.edu
No publication information submitted for this edition.
PHILLIPS, NORMAN EDGAR (b.1928) Professor.
B.A, 1949, University of British Columbia; M.A, 1950,
University of British Columbia; Ph.D, 1954, University
of Chicago. NRC Fellowship, 1954-1955, University of
California, Berkeley; Sloan Foundation Fellow, 19611963, University of California, Berkeley; Guggenheim
Fellowship, 1963-1964, Oxford University; NSF Senior
Fellowship, 1970-1971, Technical University, Helsinki;
Alexander von Humboldt Fellowship, 1992, Technische
Hochschule, Darmstadt, Germany. Materials Science.
Low-temperature properties of materials; particularly
specific heat; low-temperature thermometry; magnetic
materials; superconductors; heavy-fermion compounds.
TEL: (510) 642-4855 FAX: (510) 642-2835
Email: nephill@berkeley.edu
NEPhillips@lbl.gov
No publication information submitted for this edition.
PINES, ALEXANDER (b.1945) Professor. B.S, 1967,
Hebrew University of Jerusalem; Ph.D, 1972, M.I.T;
Ph.D.h.c, 1993, University of Paris VI; Ph.D.h.c, 1997,
University of Rome La Sapienza. NMR Spectroscopy;
Physical Chemistry. Theory and experiment in magnetic
resonance spectroscopy and imaging, high-resolution
solid-state NMR, quantum coherence and decoherence,
novel concepts and methods including “ex-situ” scanning
instrumentation, “remote” detection and amplification,
molecular and biomolecular sensors, laser polarization
and detection, superconducting quantum interference devices, and microfluidics; with applications over length
scales from meters to nanometers, in areas from materials to biomedicine. TEL: (510) 642-1220 FAX: (510)
486-5744
Web: www.waugh.cchem.berkeley.edu/
Email: pines@berkeley.edu
Publication list has not been verified by the department.
M. Sabieh Anwar, Christian Hilty, Chester Chu, Louis-S.
Bouchard, Kimberly L. Pierce and Alexander Pines, Spin Coherence Transfer in Chemical Transformations Monitored by
Remote Detection NMR, Anal. Chem. (Washington, DC, U.
S.), 79, 2806-2811 (2007).
Louis-S. Bouchard, Kirill V. Kovtunov, Scott R. Burt, M.
Sabieh Anwar, Igor V. Koptyug, Renad Z. Sagdeev and
Alexander Pines, Para-hydrogen-enhanced hyperpolarized
gas-phase magnetic resonance imaging, Angew. Chem., Int.
Ed, 46, 4064-4068 (2007).
Igor V. Koptyug, Kirill V. Kovtunov, Scott R. Burt, M. Sabieh Anwar, Christian Hilty, Song-I. Han, Alexander Pines
and Renad Z. Sagdeev, para-Hydrogen-Induced Polarization
in Heterogeneous Hydrogenation Reactions, J. Am. Chem.
Soc, 129, 5580-5586 (2007).
Sandra Garcia, Lana Chavez, Thomas J. Lowery, Song-I.
Han, David E. Wemmer and Alexander Pines, Sensitivity enhancement by exchange mediated magnetization transfer of
the xenon biosensor signal, J. Magn. Reson, 184, 72-77
(2007).
Ville-Veikko Telkki, Christian Hilty, Sandra Garcia, Elad
Harel and Alexander Pines, Quantifying the Diffusion of a
Fluid through Membranes by Double Phase Encoded Remote
Detection Magnetic Resonance Imaging, J. Phys. Chem. B,
111, 13929-13936 (2007).
CALIFORNIA, BERKELEY
Leif Schroder, Lana Chavez, Tyler Meldrum, Monica
Smith, Thomas J. Lowery, David E. Wemmer and Alexander
Pines, Temperature-controlled molecular depolarization gates
in nuclear magnetic resonance, Angew. Chem., Int. Ed, 47,
4316-4320 (2008).
C. W. Crawford, Shoujun Xu, Eric J. Siegel, Dmitry Budker and Alexander Pines, Fluid-flow characterization with nuclear spins without magnetic resonance, Appl. Phys. Lett, 93,
092507/1-092507/3 (2008).
Shoujun Xu, C. W. Crawford, Simon Rochester, Valeriy
Yashchuk, Dmitry Budker and Alexander Pines, Submillimeter-resolution magnetic resonance imaging at the Earth’s
magnetic field with an atomic magnetometer, Phys. Rev. A:
At., Mol., Opt. Phys, 78, 013404/1-013404/4 (2008).
Leif Schroder, Tyler Meldrum, Monica Smith, Thomas J.
Lowery, David E. Wemmer and Alexander Pines, Temperature Response of 129Xe Depolarization Transfer and Its Application for Ultrasensitive NMR Detection, Phys. Rev. Lett,
100, 257603/1-257603/4 (2008).
Louis-S. Bouchard, Scott R. Burt, M. Sabieh Anwar, Kirill
V. Kovtunov, Igor V. Koptyug and Alexander Pines, NMR
Imaging of Catalytic Hydrogenation in Microreactors with
the Use of para-Hydrogen, Science (Washington, DC, U. S.),
319, 442-445 (2008).
RASMUSSEN, JOHN OSCAR (b.1926) Professor
(Emeritus). B.S, 1948, California Institute of Technology; Ph.D, 1952, University of California, Berkeley. Research Associate, 1953, Research Institute of Physics,
Stockholm. Nuclear Chemistry. Prompt fission-gammaray spectroscopy; spheroidal and triaxial nuclei; chiral
and parity doubling in nuclear rotational bands. TEL:
(510) 486-6318 FAX: (510) 527-8790
Email: jorasmussen@lbl.gov
No publication information submitted for this edition.
RAYMOND, KENNETH NORMAN (b.1942) Professor. B.A, 1964, Reed College; Ph.D, 1968, Northwestern University. Miller Research Professor, 1977-1978,
University of California; Guggenheim Fellowship, 19801981, University of California; Humboldt Research
Award for Senior U.S. Scientists, 1992; Miller Research
Professor, 1996, University of California; Erskine Fellow, 1997, University of Canterbury, New Zealand; Miller Research Professor, 2004, University of California;
Chancellor’s Professor, 2006, University of California.
Inorganic Chemistry; Supramolecular Chemistry. The
coordination chemistry and mechanisms of biological
iron transport; synthesis of metal-ion-specific complexing agents; the structure and bonding of coordination
compounds; metals in medicine. TEL: (510) 642-7219
FAX: (510) 486-5283
Web: chem.berkeley.edu/people/faculty/raymond/
raymond.html
Email: raymond@socrates.berkeley.edu
Bryan E. F. Tiedemann and Kenneth N. Raymond, Second-order Jahn-Teller effect in a host-guest complex, Angew.
Chem. Int. Ed, 46, 4976-4978 (2007).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Catalytic deprotection of acetals in strongly basic
solution using a self-assembled ‘nanozyme’, Angew. Chem.
Int. Ed, 46, 8587-8589 (2007).
Michael D. Pluth and Kenneth N. Raymond, Reversible
guest exchange mechanisms in supramolecular host–guest
assemblies, Chem. Soc. Rev, 36, 161-171 (2007).
Michael Seitz, Michael D. Pluth and Kenneth N. Raymond, 1,2-HOIQO – A highly versatile 1,2-HOPO analog,
Inorg. Chem, 46, 351-353 (2007).
Christoph J. Jocher, Mauro Botta, Stefano Avedano, Evan
G. Moore, Jide Xu and Kenneth N. Raymond, Optimized relaxivity and stability of [Gd(H(2,2)-1,2-HOPO)(H2O)]- for
use as MRI contrast agent, Inorg. Chem, 46, 4796-4798
(2007).
Evan G. Moore, Christoph J. Jocher, Jide Xu, Eric J. Werner and Kenneth N. Raymond, An octadentate luminescent
Eu(III) 1,2-HOPO chelate with potent aqueous stability,
Inorg. Chem, 46, 5468-5470 (2007).
Christoph J. Jocher, Evan G. Moore, Jide Xu, Stefano Avedano, Mauro Botta, Silvio Aime and Kenneth N. Raymond,
1,2-hydroxypyridonates as contrast agents for magnetic resonance imaging: TREN-1,2-HOPO, Inorg. Chem, 46, 91829191 (2007).
Shannon M. Biros, Robert G. Bergman and Kenneth N.
Raymond, The hydrophobic effect drives the recognition of
hydrocarbons by an anionic metal-ligand cluster, J. Am
Chem. Soc, 129, 12094-12095 (2007).
Anna V. Davis, Dorothea Fiedler, Marco Ziegler, Andreas
Terpin and Kenneth N. Raymond, Resolution of chiral, tetrahedral M4L6 metal-ligand hosts, J. Am Chem. Soc, 129,
15354-15363 (2007).
Eric J. Werner, Stefano Avedano, Mauro Botta, Benjamin
P. Hay, Evan G. Moore, Silvio Aime and Kenneth N. Raymond, Highly soluble tris-hydroxypyridonate Gd(III) complexes with increased hydration number, fast water exchange,
slow electronic relaxation, and high relaxivity, J. Am Chem.
Soc, 129, 1870-1871 (2007).
Anne E. V. Gorden, Jide Xu, Géza Szigethy, Allen Oliver,
David K. Shuh and Kenneth N. Raymond, Characterization
of a mixed salt of 1-Hydroxy-pyridin-2-one Pu(IV) complexes, J. Am Chem. Soc, 129, 6674-6675 (2007).
Michael Seitz, Allen G. Oliver and Kenneth N. Raymond,
The lanthanide contraction revisited, J. Am. Chem Soc, 129,
11153-11160 (2007).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Making amines strong bases: Thermodynamic stabilization of protonated guests in a highly-charged supramolecular host, J. Am. Chem Soc, 129, 11459-11467 (2007).
Michael Seitz, Evan G. Moore, Andrew J. Ingram, Gilles
Muller and Kenneth N. Raymond, Enantiopure, octadentate
ligands as sensitizers for europium and terbium circularly polarized luminescence in an aqueous solution, J. Am. Chem
Soc, 129, 15468-15470 (2007).
Dennis H. Leung, Robert G. Bergman and Kenneth N.
Raymond, Highly selective supramolecular catalyzed allylic
alcohol isomerization, J. Am. Chem. Soc, 129, 2746-2747
(2007).
Stéphane Petoud, Gilles Muller, Evan G. Moore, Jide Xu,
Jurek Sokolnicki, James P. Riehl, Uyen Le, Seth M. Cohen
and Kenneth N. Raymond, Brilliant Sm, Eu, Tb and Dy chiral lanthanide complexes with strong circularly polarized luminescence, J. Am. Chem. Soc, 129, 77-83 (2007).
Jacob M. Hooker, Ankona Datta, Mauro Botta, Kenneth N.
Raymond and Matthew B. Francis, Magnetic resonance contrast agents from viral capsid shells: A comparison of exterior and interior cargo strategies, Nano Lett, 7, 2207-2210
(2007).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Acid catalysis in basic solution: A supramolecular
host promotes orthoformate hydrolysis, Science, 316, 85-88
(2007).
Shannon M. Biros, Robert M. Yeh and Kenneth N. Raymond, Design and formation of a large, tetrahedral cluster using 1,1’-binaphthyl ligands, Angew. Chem. Int. Ed, 47, 60626064 (2008).
Evan G. Moore, Géza Szigethy, Jide Xu, Lars-Olof Palsson, Andrew Beeby and Kenneth N. Raymond, 3-Hydroxypyridin-2-one complexes of near-infrared (NIR) emitting lanthanides: Sensitization of holmium(III) and praseodymium
(III) in aqueous solution, Angew. Chem. Int. Ed, 47, 9500
–9503 (2008).
Eric J. Werner, Ankona Datta, Christoph J. Jocher and
Kenneth N. Raymond, High-relaxivity MRI contrast agents:
Where coordination chemistry meets medical imaging, Angew. Chemie. Intl. Ed, 47, 8568-8580 (2008).
Michael D. Pluth, Robert G. Bergman and Kenneth. N.
Raymond, Selective stoichiometric and catalytic reactivity in
the confines of a chiral supramolecular assembly, chapter in
Supramolecular Catalysis, 165-191 (2008).
Geza Szigethy, Jide Xu, Anne E. V. Gorden, Simon J.
Teat, David K. Shuh and Kenneth N. Raymond, Surprising
coordination geometry differences in Ce(IV)- and Pu(IV)maltol complexes, Eur. J. Inorg. Chem, 2143–2147 (2008).
Michael Seitz and Kenneth N. Raymond, Efficient route to
highly water-soluble cyclic hydroxamic acid ligands, Eur. J.
Org. Chem, 16, 2697–2700 (2008).
Michael D. Pluth, Bryan E. F. Tiedemann, Herman van
Halbeek, Rudi Nunlist and Kenneth N. Raymond, Diffusion
of a highly charged supramolecular assembly: Direct observation of ion association in water, Inorg. Chem, 47, 14111413 (2008).
Evan G. Moore, Jide Xu, Christoph J. Jocher, Ingrid Castro
Rodriguez and Kenneth N. Raymond, Highly luminescent
lanthanide complexes of 1 hydroxy-2-pyridinones, Inorg.
Chem, 47, 3105-3118 (2008).
Anthony D’Aléo, Jide Xu, Evan G. Moore, Christoph J.
Jocher and Kenneth N. Raymond, Aryl-bridged 1-hydroxypyridin-2-one: Sensitizer ligands for Eu(III), Inorg. Chem,
47, 6109-6111 (2008).
Amanda P. S. Samuel, Evan G. Moore, Marco Melchior,
Jide Xu and Kenneth N. Raymond, Water-soluble 2-hydroxyisophthalamides for sensitization of lanthanide luminescence,
Inorg. Chem, 47, 7535-7544 (2008).
Christoph J. Jocher, Evan G. Moore, Jason D. Pierce and
Kenneth N. Raymond, Aqueous Ln(III) luminescence agents
derived from a tasty precursor, Inorg. Chem, 47, 7951-7953
(2008).
Evan G. Moore, Michael Seitz and Kenneth N. Raymond,
Use of Yb(III) centered near infra-red (NIR) luminescence to
determine the hydration state of a 3,2 HOPO based MRI contrast agent, Inorg. Chem, 47, 8571-8573 (2008).
Michael Seitz, Evan G. Moore and Kenneth N. Raymond,
Highly fluorescent group 13 metal complexes with cyclic, aromatic hydroxamic acid ligands, Inorg. Chem, 47, 8665-8673
(2008).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Encapsulation of protonated diamines in a watersoluble, chiral, supramolecular assembly allows for measurement of hydrogen-bond breaking followed by nitrogen inversion/rotation, J. Am Chem. Soc, 130, 6362-6366 (2008).
Dennis H. Leung, Robert G. Bergman and Kenneth N.
Raymond, Enthalpy-entropy compensation reveals solvent
reorganization as a driving force for supramolecular encapsulation in water, J. Am. Chem Soc, 130, 2798-2805 (2008).
Rebecca J. Abergel, Anna M. Zawadzka and Kenneth N.
Raymond, Petrobactin-mediated iron transport in pathogenic
bacteria: Coordination chemistry of an unusual 3,4-catecholate/citrate siderophore, J. Am. Chem. Soc, 130, 2124-2125
(2008).
Courtney J. Hastings, Dorothea Fiedler, Robert G. Berg-
11
man and Kenneth N. Raymond, Aza cope rearrangement of
propargyl enammonium cations catalyzed by a self-assembled ‘nanozyme’, J. Am. Chem. Soc, 130, 10977-10983
(2008).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Supramolecular catalysis of orthoformate hydrolysis in basic solution: An enzyme-like mechanism, J. Am.
Chem. Soc, 130, 11423-11429 (2008).
Rebecca J. Abergel, Matthew C. Clifton, Juan C. Pizarro,
Jeffrey A. Warner, David K. Shuh, Roland K. Strong and
Kenneth N. Raymond, The siderocalin/enterobactin interaction: A link between mammalian immunity and bacterial iron
transport, J. Am. Chem. Soc, 130, 11524-11534 (2008).
Trisha M. Hoette, Rebecca J. Abergel, Jide Xu, Roland K.
Strong and Kenneth N. Raymond, The role of electrostatics
in siderophore recognition by the immunoprotein siderocalin,
J. Am. Chem. Soc, 130, 17584–17592 (2008).
Ankona Datta, Jacob M. Hooker, Mauro Botta, Matthew B.
Francis, Silvio Aime and Kenneth N. Raymond, High relaxivity gadolinium hydroxypyridonate-viral capsid conjugates:
Nano-sized MRI contrast agents, J. Am. Chem. Soc, 130,
2546-2552 (2008).
Rebecca J. Abergel and Kenneth N. Raymon, Terephthalamide-containing ligands: A new class of fast iron chelators,
J. Biol. Inorg. Chem, 13, 229–240 (2008).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Acceleration of amide bond rotation by encapsulation in the hydrophobic interior of a water-soluble supramolecular assembly, J. Org. Chem, 73, 7132-7136 (2008).
Courtney J. Hastings, Michael D. Pluth, Shannon M. Biros,
Robert G. Bergman and Kenneth N. Raymond, Simultaneously bound guests and chiral recognition: A chiral self-assembled supramolecular host encapsulates hydrophobic
guest, Tetrahedron, 64, 8362-8367 (2008).
Michael D. Pluth, Robert G. Bergman and Kenneth N.
Raymond, Selective organic and organometallic reactions in
water-soluble host-guest supramolecular systems, The Nucleus, 8, 10-17, 20-21 (2008).
B. Grocholski, Viscosity of planetary fluids and the amorphization of crystals at high pressure. (D)
B. Tiedemann, Guest binding, redox, and molecular transport properties of supramolecular coordination assemblies.
(D)
E. Werner, Design and evaluation of gadolinium(III) complexes as high relaxivity MRI contrast agents. (D)
L. Beltran, Towards high-spin molecular species: synthesis, characterization, and reactivity of high-nuclearity metalcynanide clusters. (D)
M. Pluth, Host-guest chemistry and proton-catalyzed reactivity in a self-assembled supramolecular assembly. (D)
P. Leonard, The synthethis, structure, and reactivity of
oligocyclopentadienylmetal complexes. (D)
P. Sangtrirutnuggui, Synthesis and reactivity of late transition metal complexes featuring a bis(8-quinolyo)methylsily
ligand. (D)
SARPONG, RICHMOND (b.1974) Assistant Professor. B.A, 1995, Macalester College; Ph.D, 2001, Princeton University. UNCF•Pfizer Postdoctoral Fellow, 20002004, California Institute of Technology. Organic Chemistry; Organometallic Chemistry. In concert with our
general program in natural product total synthesis, we
have interests in C-C bond forming processes that are
coupled with the energetically ‘downhill’ events of strain
release and aromatization to provide new strategies to access natural product motifs, the generation of metal vinylidenes under mild reaction conditions as a new entry
into C-H functionalization, and novel access to reactive
intermediates such as metallo-carbenoids and radicals.
TEL: (510) 643-6312 FAX: (510) 642-9675
Web: www.cchem.berkeley.edu/rsgrp/
Email: rsarpong@berkeley.edu
Cameron R. Smith, Eric M. Bunnelle, Allison J. Rhodes
and Richmond Sarpong, Pt-Catalyzed Cyclization/1,2-Migration for the Synthesis of Indolizines, Pyrrolones, and Indolizinones, Org. Lett, 9, 1169-1171 (2007).
Massoud Motamed, Eric M. Bunnelle, Surendra W. Singaram and Richmond Sarpong, Pt(II)-Catalyzed Synthesis of
1,2-Dihydropyridines from Aziridinyl Propargylic Esters,
Org. Lett, 9, 2167-2170 (2007).
Eric M. Simmons, Jennifer R. Yen and Richmond Sarpong, Reconciling Icetexane Biosynthetic Connections with
Their Chemical Synthesis: Total Synthesis of (±)-5,6-Dihydro-6␣-hydroxysalviasperanol, (±)-Brussonol, and (±)-Abrotanone, Org. Lett, 9, 2705-2708 (2007).
Alison R. Hardin and Richmond Sarpong, Electronic Effects in the Pt-Catalyzed Cycloisomerization of Propargylic
Esters: Synthesis of 2,3-Disubstituted Indolizines as a Mechanistic Probe, Org. Lett, 9, 4547-4550 (2007).
Tony Ly, Zhenjiu Liu, Brian G. Pujanauski, Richmond
Sarpong and Ryan R. Julian, Surveying Ubiquitin Structure
by Noncovalent Attachment of Distance Constrained Bis
(crown) Ethers, Anal. Chem. (Washington, DC, U. S.), 80,
5059-5064 (2008).
Andrew P. Marcus, Amy S. Lee, Rebecca L. Davis, Dean
J. Tantillo and Richmond Sarpong, Pronounced steric effects
of substituents in the Nazarov cyclization of aryl dienyl ketones, Angew. Chem., Int. Ed, 47, 6379-6383 (2008).
Eric M. Simmons, Alison R. Hardin, Xuelei Guo and Rich-
12
CALIFORNIA, BERKELEY
mond Sarpong, Rapid construction of the cortistatin pentacyclic core, Angew. Chem., Int. Ed, 47, 6650-6653 (2008).
Alakesh Bisai, Scott P. West and Richmond Sarpong, Unified Strategy for the Synthesis of the “Miscellaneous” Lycopodium Alkaloids: Total Synthesis of (±)-Lyconadin A, J.
Am. Chem. Soc, 130, 7222-7223 (2008).
Eric M. Bunnelle, Cameron R. Smith, Sharon K. Lee, Surendra W. Singaram, Allison J. Rhodes and Richmond Sarpong, Pt-catalyzed cyclization/migration of propargylic alcohols for the synthesis of 3(2H)-furanones, pyrrolones, indolizines, and indolizinones, Tetrahedron, 64, 7008-7014
(2008).
to existing genetic and biochemical methods and thus
open up new areas of research in cell biology. These
tools enable reverse genetic dissection of any kinase
pathway in the cell. TEL: (415) 514-0472 FAX: (415)
514-0822
Web: www.ucsf.edu/shokat
Email: shokat@cmp.ucsf.edu
Publication list has not been verified by the department.
Andras Balla, Galina Tuymetova, Balazs Toth, Zsofia
Szentpetery, Xiaohang Zhao, Zachary A. Knight, Kevan Shokat, Peter J. Steinbach and Tamas Balla, Design of Drug-Resistant Alleles of Type-III Phosphatidylinositol 4-Kinases
Using Mutagenesis and Molecular Modeling, Biochemistry,
47, 1599-1607 (2008).
Stephen J. Juris, Kavita Shah, Kevan Shokat, Jack E. Dixon and Panayiotis O. Vacratsis, Identification of otubain 1 as
a novel substrate for the Yersinia protein kinase using chemical genetics and mass spectrometry. [Erratum to document
cited in CA144:145397], FEBS Lett, 582, 3159 (2008).
Cameron R. Smith, Pt-catalyzed cyclization/1,2-migration
for the synthesis of indolizines and indolizinones. (M)
Massoud Motamed, Pt(II)-catalyzed synthesis of 1,2-dihydropyridines utilizing aziridinyl propargylic esters and progress toward the synthesis of sodwanone F. (M)
Michael David Purdham, Unified approach to the lycodine
lycopodium alkaloids: Progress toward the total synthesis of
alpha and beta obscurine. (M)
Paul G. Karayan, New organopalladium partners in the
anomalous heck reaction. (M)
SMIT, BEREND—See Chemical Engineering Section,
SAUER, KENNETH (b.1931) Emeritus Professor.
University of California, Berkeley, Department of Chemical Engineering.
A.B, 1953, Oberlin College; M.S, 1954, Harvard University; Ph.D, 1958, Harvard University. NIH Fellowship,
1960-1963, University of California, Berkeley. Biophysics/Biophysical Chemistry; Structural Biology. Photosynthetic pigment complexes, optical spectroscopy, studies of photosynthetic water oxidation; EPR and X-ray
spectroscopy. Evolution of oxygenic photosynthesis.
TEL: (510) 486-4334 FAX: (510) 486-7768
Email: khsauer@lbl.gov
Publication list has not been verified by the department.
Yulia Pushkar, Junko Yano, Pieter Glatzel, Johannes Messinger, Azul Lewis, Kenneth Sauer, Uwe Bergmann and Vittal K. Yachandra, Polarized range-extended X-ray absorption
spectroscopy of oriented photosystem II membranes in the S1
state, AIP Conf. Proc, 882, 346-348 (2007).
Yulia Pushkar, Junko Yano, Pieter Glatzel, Johannes Messinger, Azul Lewis, Kenneth Sauer, Uwe Bergmann and Vittal Yachandra, Structure and Orientation of the Mn4Ca Cluster in Plant Photosystem II Membranes Studied by Polarized
Range-extended X-ray Absorption Spectroscopy, J. Biol.
Chem, 282, 7198-7208 (2007).
Kenneth Sauer, Junko Yano and Vittal K. Yachandra, Xray spectroscopy of the photosynthetic oxygen-evolving
complex, Coord. Chem. Rev, 252, 318-335 (2008).
Junko Yano, Jan Kern, Yulia Pushkar, Kenneth Sauer,
Pieter Glatzel, Uwe Bergmann, Johannes Messinger, Athina
Zouni and Vittal K. Yachandra, High-resolution structure of
the photosynthetic Mn4Ca catalyst from X-ray spectroscopy,
Philos. Trans. R. Soc., B, 363, 1139-1147 (2008).
Yulia Pushkar, Junko Yano, Kenneth Sauer, Alain Boussac
and Vittal K. Yachandra, Structural changes in the Mn4Ca
cluster and the mechanism of photosynthetic water splitting,
Proc. Natl. Acad. Sci. U. S. A, 105, 1879-1884 (2008).
SAYKALLY, RICHARD JAMES (b.1947) Professor. B.S, 1970, University of Wisconsin, Eau Claire;
Ph.D, 1977, University of Wisconsin, Madison. National
Research Council Postdoctoral Fellowship, 1977-1979,
National Bureau of Standards. Analytical Chemistry;
Physical Chemistry. X-ray spectroscopy of liquids and
their surfaces, femtosecond laser spectroscopy of liquid
interfaces, nonlinear optical molecular imaging of complex materials, terahertz laser spectroscopy, water clusters, nature of water and aqueous solutions, nanowire lasers, nanostructured materials. TEL: (510) 642-8269
FAX: (510) 642-8369
Web: www.cchem.berkeley.edu/~rjsgrp/
Email: saykally@berkeley.edu
No publication information submitted for this edition.
SHANK, CHARLES V. (b.1943) Professor. B.S,
1965, University of California, Berkeley; M.S, 1966,
University of California, Berkeley; Ph.D, 1969, University of California, Berkeley. Postdoctoral, 1991-2001,
Steering Committee for Strategic and International Studies; Postdoctoral, 1991-2001, Steering Committee for
Council on Competitiveness; Chair, Committee on Optical Science and Engineering, 1994, National Research
Council. Investigation of ultrafast phenomena in physics;
chemistry and biology; using femtosecond optical pulse
techniques. TEL: (510) 486-5111
Email: cvshank@lbl.gov
No publication information submitted for this edition.
SHOKAT, KEVAN (b.1964) Professor. B.A, 1986,
Reed College, Portland, OR; Ph.D, 1991, University of
California, Berkeley. Postdoctoral, 1986-1991, University of California, Berkeley; Postfdoctoral, 1992-1994,
Stanford University. Organic Chemistry. My research interests are at the interface of chemistry and biology. We
create chemical tools for dissecting signal transduction
pathways. These chemical methods are complementary
SOMORJAI, GABOR ARPAD (b.1935) Professor.
B.S, 1956, University of Tech., Budapest, Hungary;
Ph.D, 1960, University of California, Berkeley.
Catalysis; Surface Chemistry. Molecular studies of structure and bonding at surfaces by sum frequency generation (SFG), vibrational spectroscopy and scanning tunneling microscopy (STM); metal nanoparticle synthesis,
characterization and catalytic reaction studies; surface
science of heterogeneous catalysis; molecular studies of
polymer surfaces and adsorbed polypeptides by atomic
force microscopy (AFM) and SFG. TEL: (510) 642-4053
FAX: (510) 643-9668
Web: www.cchem.berkeley.edu/gasgrp/
Email: somorjai@berkeley.edu
Zoltan Konya, Eva Molnar, G. Tasi, Krisztian Niesz, Gabor A. Somorjai and Imre Kiricsi, Pre-prepared platinum nanoparticles supported on SBA-15 – Preparation, pretreatment
conditions and catalytic properties, Cat. Lett, 113, 19 (2007).
Gabor A. Somorjai and Jeong Y. Park, The impact of surface science on the commercialization of chemical processes,
Cat. Lett, 115, 87 (2007).
Robert M. Rioux, Anderson L. Marsh, J. S. Gaughan and
G. A. Somorjai, Oxidation and reforming reactions of CH4
on a stepped Pt(5 5 7) single crystal, Catalysis Today, 123,
265-275 (2007).
Sunhee Kim, Yadong Yin, A. Paul Alivisatos, Gabor A.
Somorjai and John T. Yates, Jr, IR spectroscopic observation
of molecular transport through Pt@CoO yolk-shell nanostructures, J. Am. Chem. Soc, 129, 9510-9513 (2007).
James D. Hoefelmeyer, Hongjian Liu, Gabor A. Somorjai
and T. Don Tilley, Reverse micelle synthesis of rhodium nanoparticles, J. Colloid and Interface Sciences, 307, 86-93
(2007).
Yawen Zhang, Michael E. Grass, Susan E. Habas, Feng
Tao, Tianfu Zhang, Peidong Yang and Gabor A. Somorjai,
One-step polyol synthesis and langmuir-blodgett monolayer
formation of size-tunable monodisperse rhodium nanocrystals with catalytically active (111) surface structure, J. Phys.
Chem. C, 111, 12243-12253 (2007).
Jeong Y. Park, J. R. Renzas, Bryan B. Hsu and Gabor A.
Somorjai, Interfacial and chemical properties of Pt/TiO2, Pd/
TiO2, Pt/GaN catalytic nanodiodes incluencing hot electron
flow, J. Phys. Chem. C, 111, 15331-15336 (2007).
Diana C. Phillips, Roger L. York, Ozzy Mermut, Keith R.
McCrea, Robert S. Ward and Gabor A. Somorjai, Side chain,
chain length, and sequence effects on amphiphilic peptide adsorption at hydrophobic and hydrophilic surfaces studied by
sum-frequency generation vibrational spectroscopy and
quartz crystal microbalance, J. Phys. Chem. C, 111, 255-261
(2007).
Yuri Borodko, Simon M. Humphrey, T. Don Tilley, Heinz
Frei and Gabor A. Somorjai, Charge-transfer interaction of
poly(vinylpyrrolidone) with platinum and rhodium nanoparticles, J. Phys. Chem. C, 111, 6288-6295 (2007).
Kaitlin M. Bratlie and Gabor A. Somorjai, A sum frequency generation vibrational spectroscopic study of the adsorption and reactions of C6 hydrocarbons at high pressures on Pt
(100), J. Phys. Chem. C, 111, 6837-6845 (2007).
Roger L. York, Ozzy Mermut, Diana C. Phillips, Keith R.
McCrea, Robert S. Ward and Gabor A. Somorjai, The influence of ionic strength on the adsorption of a model peptide
on hydrophilic silica and hydrophobic polystyrene surfaces:
Insights from SFG vibrational spectroscopy, J. Phys. Chem.
C, 111, 8866-8871 (2007).
Yimin Li and Gabor A. Somorjai, Surface premelting of
ice, J. Phys. Chem. C, 111, 9631-9637 (2007).
Imre Kiricsi, Zoltan Konya, Akos Kukovecz, Tasi Gyula
and Gabor A. Somorjai, Studies of reaction intermediates
with experimental and theoretical methods, Magyar Kemiai
Folyoirat, 113, 49 (2007).
Kaitlin M. Bratlie, Hyunjoo Lee, Kyriakos Komvopoulos,
Peidong Yang and Gabor A. Somorjai, Platinum nanoparticle
shape effects on benzene hydrogenation selectivity, Nano
Letters, 7, 3097-3101 (2007).
Simon M. Humphrey, Michael E. Grass, Susan E. Habas,
Krisztian Niesz, Gabor A. Somorjai and T. Don Tilley, Rhodium nanoparticles from cluster seeds: Control of size and
shape by precursor addition rate, Nano Letters, 7, 785-790
(2007).
Gabor A. Somorjai, Roger L. York, Derek Butcher and
Jeong Y. Park, The evolution of model catalytic systems;
studies of structure, bonding and dynamics from single crystal metal surfaces to nanoparticles, and from low pressure (<
10-3 Torr) to high pressure (> 10-3 Torr) to liquid interfaces,
Phys. Chem. Chem. Phys, 9, 3500-3513 (2007).
Gabor A. Somorjai and Jeong Y. Park, Frontiers of surface
science, Physics Today, Oct, 48-54 (2007).
Jeong Y. Park, J. R. Renzas, A. M. Contreras and Gabor A.
Somorjai, The genesis and importance of oxide-metal interface controlled heterogeneous catalysis; the catalytic nanodiode, Topics in Catalysis, 46, 217-222 (2007).
Michael E. Grass, Yawen Zhang, Derek R. Butcher, Jeong
Y. Park, Yimin Li, Hendrik Bluhm, Kaitlin M. Bratlie, Tianfu Zhang and Gabor A. Somorjai, A reactive oxide overlayer
on rhodium nanoparticles during CO oxidation and its size
dependence studied by in situ ambient pressure x-ray photoelectron spectroscopy, Angew. Chem. Int. Ed, 47, 8893-8896
(2008).
Gabor A. Somorjai and Jeong Y. Park, Molecular ingredients of catalytic selectivity, Angewandte Chemie Intl. Ed, 47,
9212-9228 (2008).
Tianfu Zhang, Jeong Y. Park, Wenyu Huang and Gabor A.
Somorjai, Influence of reaction with XeF2 on surface adhesion of Al and Al2O3 surfaces, Appl. Phys. Lett, 93, 141905
(2008).
Roger L. York, George J. Holinga, Dean R. Guyer, Keith
R. McCrea, Robert S. Ward and Gabor A. Somorjai, A new
optical parametric amplifier based on lithium thioindate used
for sum frequency generation vibrational spectroscopic studies of the amide I mode of an interfacial model peptide, Applied Spectroscopy, 62, 937 (2008).
R. M. Rioux, B. B. Hsu, M. E. Grass, H. Song and G. A.
Somorjai, Influence of particle size on reaction selectivity in
cyclohexene hydrogenation and dehydrogenation over silicasupported monodisperse Pt particles, Cat. Lett, 126, 10-19
(2008).
Kaitlin M. Bratlie, Yimin Li, Ragnar Larsson and Gabor A.
Somorjai, Compensation effect of benzene hydrogenation on
Pt(111) and Pt(100) analyzed by the selective energy transfer
model, Catal. Lett, 121, 173-178 (2008).
A. L. Marsh, F. H. Ribeiro and G. A. Somorjai, Single
crystal surfaces, Chapter 4.1 in Handbook of Heterogeneous
Catalysis, 307, 1259 (2008).
Gabor A. Somorjai and Jeong Y. Park, Molecular surface
chemistry by metal single crystals and nanoparticles from
vacuum to high pressure, Chem. Soc. Rev, 37, 2155-2162
(2008).
Roger L. York, William K. Browne, Phillip L. Geissler and
Gabor A. Somorjai, Peptides adsorbed on hydrophobic surfaces. A sum frequency generation vibrational spectroscopy
and modeling study, Israel J. of Chemistry, 47, 51-58 (2008).
John N. Kuhn, Wenyu Huang, Chia-Kuang Tsung, Yawen
Zhang and Gabor A. Somorjai, Structure sensitivity of carbon-nitrogen ring opening: Impact of platinum particle size
from below 1 to 5 nm upon pyrrole hydrogenation product
selectivity over monodisperse platinum nanoparticles loaded
onto mesoporous silica, J. Am. Chem. Soc, 130, 14026-14027
(2008).
Hyunjoo Lee, Susan E. Habas, Gabor A. Somorjai and Peidong Yang, Localized Pd overgrowth on cubic Pt nanocrystals for enhanced electrocatalytic oxidation of formic acid, J.
Am. Chem. Soc, 130, 5406-5407 (2008).
Yawen Zhang, Michael E. Grass, John N. Kuhn, Feng Tao,
Susan E. Habas, Wenyu Huang, Peidong Yang and Gabor A.
Somorjai, Highly selective synthesis of catalytially active
monodisperse rhodium nanocubes, J. Am. Chem. Soc, 130,
5868 (2008).
Robert M. Rioux, Russell Komor, Hyunjoon Song, James
D. Hoefelmeyer, Michael Grass, Krisztian Niesz, Peidong
Yang and Gabor A. Somorjai, Kinetics and mechanism ethylene hydrogenation by CO on silica-supported monodisperse
Pt nanoparticles, J. Catalysis, 254, 1 (2008).
Gabor A. Somorjai and Jeong Y. Park, Evolution of the
surface science of catalysis from single crystals to metal nanoparticles under pressure, J. Chem. Phys, 128, 182504
(2008).
Matthias M. Koebel, Louis C. Jones and Gabor A. Somorjai, Preparation of size-tunable, highly monodisperse PVPprotected Pt-nanoparticles by seed-mediated growth, J. Nanopart Resh, 10, 1063-1069 (2008).
G. A. Somorjai and P. J. Rous, John Pendry: His contributions to the development of low energy electron diffraction
surface crystallography, J. of Physics: Condensed Matter, 20,
304210 (2008).
Christopher J. Kliwer, Marco Bieri and Gabor A. Somorjai, Sum frequency generation vibrational spectroscopy of
pyridyne hydrogenation on platinum nanoparticles, J. Phys.
Chem. C, 112, 11373 (2008).
Kaitlin M. Bratlie, Kyriakos Komvopoulos and Gabor A.
Somorjai, Sum frequency generation vibrational spectroscopy of pyridyne hydrogenation on platinum nanoparticles, J.
Phys. Chem. C, 112, 11865-11808 (2008).
Yawen Zhang, Wenyu Huang, Susan E. Habas, John N.
Kuhn, Michael E. Grass, Yusuke Yamada, Peidong Yang and
Gabor A. Somorjai, Near-monodisperse Ni-Cu bimetallic na-
CALIFORNIA, BERKELEY
nocrystals of variable composition: Controlled synthesis and
catalytic activity for H2 generation, J. Phys. Chem. C, 112,
12092-12095 (2008).
Michael E. Grass, Yao Yue, Susan E. Habas, Robert M.
Rioux, Chelsea I. Teall, Peidong Yang and Gabor A. Somorjai, Silver ion mediated shape control of platinum nanoparticles: Removal of silver by selective etching leads to increased catalytic activity, J. Phys. Chem. C, 112, 4797-4804
(2008).
Leonid Belau, Jeong Y. Park, Ted Liang and Gabor A. Somorjai, The effects of oxygen plasma on the chemical composition and morphology of the Ru capping layer of the extreme ultraviolet mask blanks, J. Vac. Sci. Technol, 26, 2225
(2008).
R. M. Rioux, J. D. Hoefelmeyer, M. Grass, H. Song, K.
Niesz, P. Yang and G. A. Somorjai, Adsorption and co-adsorption of ethylene and carbon monoxide on silica-supported monodisperse Pt nanoparticles. Volumetric adsorption and
infrared spectroscopy studies, Langmuir, 24, 198-207 (2008).
Robert M. Rioux, Hyunjoon Song, Peidong Yang and Gabor A. Somorjai, Platinum nanoclusters’ size and surface
structure sensitivity of catalytic reactions, Metal Nanoclusters in Catalysis and Materials Science: the Issue of SizeControl. B, 149-166 (2008).
Wenyu Huang, John N. Kuhn, Chia-kuang Tsung, Yawen
Zhang, Susan E. Habas, Peidong Yang and Gabor A. Somorjai, Dendrimer templated synthesis of one nanometer Rh and
Pt particles supported on mesoporous silica: Catalytic activity for ethylene and pyrrole hydrogenation, Nano Letters, 8,
2027 (2008).
Jeong Y. Park, Hyunjoo Lee, J. Russell Renzas, Yawen
Zhang and Gabor A. Somorjai, Probing hot electron flow
generated on Pt nanoparticles with Au/TiO2 Schottky diodes
during catalytic CO oxidation, Nano Letters, 8, 2388-2392
(2008).
Jeong Y. Park, Yawen Zhang, Michael Grass, Tianfu
Zhang and Gabor A. Somorjai, Tuning of catalytic CO oxidation by changing composition of Rh-Pt bimetallic nanoparticles, Nano Letters, 8, 673-677 (2008).
Feng Tao, David C. Tang, Miquel Salmeron and Gabor A.
Somorjai, A new scanning tunneling microscope reactor used
for high pressure and high temperature catalysis studies, Rev.
Sci. Instrum, 79, 084101 (2008).
Feng Tao, Michael E. Grass, Yawen Zhang, James R. Renzas, Derek R. Butcher, Zhi Liu, Jen Y. Chung, Bongjin S.
Mun, Miquel Salmeron and Gabor A. Somorjai, Reactiondriven restructuring of Rh-Pd and Pt-Pd core-shell nanoparticles, Science, 322, 932-934 (2008).
Gabor A. Somorjai, Feng Tao and Jeong Young Park, The
nanoscience revolution: Merging of colloid science, catalysis
and nanoelectronics, Topics in Catalysis, 47, 1-14 (2008).
Gabor A. Somorjai, The 13th International Symposium on
Relations between Homogeneous and Heterogeneous Catalysis – An Introduction, Topics in Catalysis, 48, 1-7 (2008).
Gabor A. Somorjai and Jeong Y. Park, Colloid science of
metal nanoparticle catalysts in 2D and 3D structures. Challenges of nucleation, growth, composition, particle shape,
size control and their influence on activity and selectivity,
Topics in Catalysis, 49, 126-135 (2008).
Kaitlin Bratlie, High-pressure catalytic reaction of C6 hydrocarbons on platinum single crystals and nanoparticles. A
sum frequency generation vibrational spectroscopic and kinetic study. (D)
Roger York, Sum frequency generation vibrational spectroscopy studies on model peptide and amino acid adsorption
at the hydrophobic solid-water and hydrophilic solid-water
interfaes. (D)
STACY, ANGELICA MARIA (b.1955) Professor of
Chemistry. B.A, 1977, LaSalle College; Ph.D, 1981,
Cornell University. Postdoctoral Fellowship, 1981-1983,
Northwestern University. Chemistry Education; Materials Chemistry. Synthesis of nanowire arrays; structural,
thermoelectric, and magnetic properties; solution routes
to solids; research in chemistry education. TEL: (510)
643-4536 FAX: (510) 642-8369
Web: www.cchem.berkeley.edu/~chemgrad/faculty/
stacy.html
Email: astacy@calmail.berkeley.edu
No publication information submitted for this edition.
STRAUSS, HERBERT LEOPOLD (b.1936) Professor. B.A, 1957, Columbia University; M.A, 1958, Columbia University; Ph.D, 1960, Columbia University.
Fellowship, 1960-1961, Oxford University. Physical
Chemistry. Vibrational spectroscopy; large-amplitude
molecular motion; molecular structure and kinetics in
condensed phases; phase transitions and statistical mechanics; model biological systems. TEL: (510) 642-7114
FAX: (510) 643-2156
Email: hls@berkeley.edu
No publication information submitted for this edition.
STREITWIESER, ANDREW, JR. (b.1927) Professor Emeritus. A.B, 1948, Columbia University; M.S,
1950, Columbia University; Ph.D, 1952, Columbia University. AEC Fellow, 1951-1952, M.I.T. Physical Organic Chemistry; Theoretical Chemistry. Carbon acidity;
ab initio quantum organic chemistry; physical organic
chemistry; organometallic chemistry. TEL: (510) 6422204 FAX: (510) 841-6072
Web: chem.berkeley.edu/people/emeriti/streitwieser.
html
Email: astreit@berkeley.edu
No publication information submitted for this edition.
TEMPLETON, DAVID HENRY (b.1920) Professor
Emeritus. B.S, 1941, Louisiana Polytechnic Institute;
M.A, 1943, University of Texas; Ph.D, 1947, University
of California; D.Sc, 1977, University of Uppsala. Methods of crystal structure determination, anomalous scattering of x-rays. TEL: (510) 237-8539 FAX: (510) 4865596
Email: dhtem@aol.com
No publication information submitted for this edition.
TILLEY, T. DON (b.1954) Professor. B.S, 1977, University of Texas; Ph.D, 1982, University of California,
Berkeley. NSF Exchange Postdoctoral Associate, 19811983, California Institute of Technology and ETH, Zurich, Switzerland. Inorganic Chemistry; Materials Chemistry. Synthetic and mechanistic problems in inorganic,
organometallic, and materials chemistry; coordination
polymerizations; polymer synthesis; molecular precursors to solid state materials; catalysis; renewable energy.
TEL: (510) 642-8939 FAX: (510) 642-8940
Web: www.cchem.berkeley.edu/~tdtgroup/
Email: tdtilley@berkeley.edu
Rory Waterman, Paul G. Hayes and T. Don Tilley, Synthetic Development and Chemical Reactivity of TransitionMetal Silylene Complexes, Acc. Chem. Res, 40, 712-719
(2007).
Daniel A. Ruddy and T. Don Tilley, Highly selective olefin epoxidation with aqueous H2O2 over surface-modified
TaSBA15 prepared via the TMP method, Chem. Commun.
(Cambridge, U. K.), 3350-3352 (2007).
James D. Hoefelmeyer, Hongjian Liu, Gabor A. Somorjai
and T. Don Tilley, Reverse micelle synthesis of rhodium nanoparticles, J. Colloid Interface Sci, 309, 86-93 (2007).
John F. Tannaci, Masahiro Noji, Jennifer McBee and T.
Don Tilley, 9,10-Dichlorooctafluoroanthracene as a Building
Block for n-Type Organic Semiconductors, J. Org. Chem,
72, 5567-5573 (2007).
Christopher A. Bradley, Meredith J. McMurdo and T. Don
Tilley, Selective Catalytic Cyclohexene Oxidation Using Titanium-Functionalized Silicone Nanospheres, J. Phys. Chem.
C, 111, 17570-17579 (2007).
Yuri Borodko, Simon M. Humphrey, T. Don Tilley, Heinz
Frei and Gabor A. Somorjai, Charge-Transfer Interaction of
Poly(vinylpyrrolidone) with Platinum and Rhodium Nanoparticles, J. Phys. Chem. C, 111, 6288-6295 (2007).
Simon M. Humphrey, Michael E. Grass, Susan E. Habas,
Krisztian Niesz, Gabor A. Somorjai and T. Don Tilley, Rhodium Nanoparticles from Cluster Seeds: Control of Size and
Shape by Precursor Addition Rate, Nano Lett, 7, 785-790
(2007).
Elizabeth A. Glascoe, Matthias F. Kling, Jennifer E. Shanoski, Robert A. Di Stasio, Jr., Christine K. Payne, Benjamin
V. Mork, T. Don Tilley and Charles B. Harris, Photoinduced
␤-Hydrogen Elimination and Radical Formation with CpW
(CO)3(CH2CH3): Ultrafast IR and DFT Studies, Organometallics, 26, 1424-1432 (2007).
Preeyanuch Sangtrirutnugul and T. Don Tilley, Silyl Derivatives of [Bis(8-quinolyl)methylsilyl]iridium(III) Complexes: Catalytic Redistribution of Arylsilanes and Dehydrogenative Arene Silylation, Organometallics, 26, 5557-5568
(2007).
Katharine Geramita, Jennifer McBee, Y. Tao, Rachel A.
Segalman and T. Don Tilley, Synthesis and characterization
of 2,7-bis(pentafluorophenylethynyl)hexafluoro-heterofluorenes: New materials with high electron affinities, Chem.
Commun, 5107 (2008).
Daniel A. Ruddy, Jonggol Jarupatrakorn, Robert M. Rioux,
Jeffrey T. Miller, Meredith J. McMurdo, Jennifer L. McBee,
Karl A. Tupper and T. Don Tilley, Site-isolated Pt-SBA15
materials from tris(tert-butoxy)siloxy complexes of Pt(II) and
Pt(IV), Chem. Mater, 20, 6517-6527 (2008).
Daniel A. Ruddy and T. Don Tilley, Kinetics and Mechanism of Olefin Epoxidation with Aqueous H2O2 and a Highly
Selective Surface-Modified TaSBA15 Heterogeneous Catalyst, J. Am. Chem. Soc, 130, 11088-11096 (2008).
Adam D. Miller, Jennifer L. McBee and T. Don Tilley,
Mechanism of Reversible Alkyne Coupling at Zirconocene:
Ancillary Ligand Effects, J. Am. Chem. Soc, 130, 4992-4999
(2008).
Elisa Calimano and T. Don Tilley, Alkene Hydrosilation
by a Cationic Hydrogen-Substituted Iridium Silylene Complex, J. Am. Chem. Soc, 130, 9226-9227 (2008).
John F. Tannaci, Masahiro Noji, Jennifer L. McBee and T.
Don Tilley, 9,10-Disubstituted Octafluoroanthracene Derivatives via Palladium-Catalyzed Cross-Coupling, J. Org.
Chem, 73, 7895-7900 (2008).
Jennifer L. McBee, Alexis T. Bell and T. Don Tilley,
Mechanistic studies of hydroamination of norbornene with
electrophilic platinum complexes: The role of proton transfer, Journal of the American Chemical Society, 130, 16562
(2008).
13
Kanhayalal Baheti, Jonathan A. Malen, Peter Doak, Pramod Reddy, Sung-Yeon Jang, T. Don Tilley, Arun Majumdar and Rachel A. Segalman, Probing the chemistry of molecular heterojunctions using thermoelectricity, Nano Lett, 8,
715-719 (2008).
Andreas Fischbach, Patrick R. Bazinet, Rory Waterman
and T. Don Tilley, ␤-Phosphinoethylboranes as Ambiphilic
Ligands in Nickel-Methyl Complexes, Organometallics, 27,
1135-1139 (2008).
Patrick Bazinet and T. Don Tilley, Octa- and Nonamethylfluorenyl Complexes of Zr(II), Zr(IV), and Hf(IV). Investigation of Steric and Electronic Effects, Organometallics, 27,
1267-1274 (2008).
Preeyanuch Sangtrirutnugul and T. Don Tilley, Alkyl and
hydrido complexes of platinum(IV) supported by the bis(8quinolyl)methylsilyl ligand, Organometallics, 27, 2223-2230
(2008).
Noemi Barros, Odile Eisenstein, Laurent Maron and T.
Don Tilley, DFT Investigation of the Catalytic Hydromethylation of Olefins by Scandocenes. 2. Influence of the Ansa Ligand on Propene and Isobutene Hydromethylation, Organometallics, 27, 2252-2257 (2008).
Akihiro Shinohara, Jennifer McBee, Rory Waterman and
T. Don Tilley, Paramagnetic Vanadium Silyl Complexes:
Synthesis, Structure, and Reactivity, Organometallics, 27,
5717-5722 (2008).
Daniel A. Ruddy, Richard L. Brutchey and T. Don Tilley,
The Influence of Surface Modification on the Epoxidation
Selectivity and Mechanism of TiSBA15 and TaSBA15 Catalysts with Aqueous Hydrogen Peroxide, Top. Catal, 48, 99106 (2008).
Christopher William Gribble, Synthesis of osmium stannylene complexes and mechanistic investigation for isomerization of a hydrogen-substituted stannylene complex to its metallostannylene isomer. (M)
Guangtao Li, Development of novel iron catalysts and exploration of non-heme type chemistry. (M)
Adam Donald Miller, Zirconocene coupling of alkynes:
Mechanistic insights, synthetic methodologies, and applications. (D)
Daniel Anthony Ruddy, Applications of the thermolytic
molecular precursor method in the syntheses of site-isolated
heterogeneous catalysts. (D)
John Frederick Tannaci, Novel conjugated materials via
zirconocene coupling and palladium-catalyzed cross-coupling. (D)
Katharine Geramita, Synthesis and characterization of perfluoroaryl derivatized compounds for use as n-type materials
in organic electronic applications. (D)
Preeyanuch Sangtrirutnugul, Synthesis and reactivity of
late transition metal complexes featuring a bis(8-quinolyl)
methylsilyl ligand. (D)
TINOCO, IGNACIO (b.1930) Professor. B.S, 1951,
University of New Mexico; Ph.D, 1954, University of
Wisconsin; D.Sc, 1972, University of New Mexico.
Postdoctoral Fellowship, 1954-1956, Yale University.
Biophysics/Biophysical Chemistry. Structures and functions of nucleic acids: RNA, single-molecule methods.
TEL: (510) 642-3038 FAX: (510) 643-6232
Web: www.chem.berkeley.edu/people/faculty/tinoco/
tinoco.html
Email: intinoco@lbl.gov
Jin-Der Wen, Maria Manosas, Pan T. X. Li, Steven B.
Smith, Carlos Bustamante, Felix Ritort and Ignacio Tinoco,
Jr, Force unfolding kinetics of RNA using optical tweezers. I.
Effects of experimental variables on measured results, Biophys. J, 92, 2996-3009 (2007).
Maria Manosas, Jin-Der Wen, Pan T. X. Li, Steven B.
Smith, Carlos Bustamante, Ignacio Tinoco, Jr. and Felix Ritort, Single molecule RNA force unfolding kinetics using optical tweezers. II. Modeling experiments, Biophys. J, 92,
3101-3021 (2007).
Jeffrey Vieregg, Wei Cheng, Carlos Bustamante and Ignacio Tinoco, Jr, Measurement of the Effect of Monovalent
Cations on RNA Hairpin Stability, J. Am. Chem. Soc, 129,
14966-14973 (2007).
Wei Cheng, Sophie Dumont, Ignacio Tinoco and Carlos
Bustamante, NS3 helicase actively separates RNA strands
and senses sequence barriers ahead of the opening fork, Proc.
Natl. Acad. Sci. U. S. A, 104, 13954-13959 (2007).
Pan T. X. Li, Carlos Bustamante and Ignacio Tinoco, Realtime control of the energy landscape by force directs the
folding of RNA molecules, Proc. Natl. Acad. Sci. U. S. A,
104, 7039-7044 (2007).
Gang Chen, Jin-Der Wen and Ignacio Tinoco, Jr, Singlemolecule mechanical unfolding and folding of a pseudoknot
in human telomerase RNA, RNA, 13, 2175-2188 (2007).
Pan T. X. Li, Jeffrey Vieregg and Ignacio Tinoco, Jr, How
RNA unfolds and refolds, Annu. Rev. Biochem, 77, 77-100
(2008).
Lisa Green, Chul-Hyun Kim, Carlos Bustamante and Ignacio Tinoco, Characterization of the Mechanical Unfolding of
RNA Pseudoknots, J. Mol. Biol, 375, 511-528 (2008).
Jin-Der Wen, Laura Lancaster, Courtney Hodges, AnaCarolina Zeri, Shige H. Yoshimura, Harry F. Noller, Carlos
Bustamante and Ignacio Tinoco, Following translation by
single ribosomes one codon at a time, Nature (London, U.
K.), 452, 598-603 (2008).
14
CALIFORNIA, BERKELEY
Pan T. X. Li and Ignacio Tinoco, Jr, Thermodynamics and
kinetics of RNA unfolding and refolding, Non-Protein Coding RNAs, 49-72 (2008).
TOSTE, F. DEAN Assistant Professor. B.Sc, 1993,
University of Toronto; M.Sc, 1995, University of Toronto; Ph.D, 2000, Stanford. Postdoctoral Scholar, 20012002, California Institute of Technology. Organic Chemistry. TEL: (510) 642-2850 FAX: (510) 643-0480
Web: www.cchem.berkeley.edu/~toste/
Email: fdtoste@berkeley.edu
Xin Linghu, Joshua J. Kennedy-Smith and F. Dean Toste,
Total synthesis of (+)-fawcettimine, Angew. Chem., Int. Ed,
46, 7671-7673 (2007).
Jun Hee Lee and F. Dean Toste, Gold(II)-catalyzed synthesis of functionalized cyclopentadienes, Angew. Chem., Int.
Ed, 46, 912-914 (2007).
Michael R. Luzung, Pablo Mauleon and F. Dean Toste,
Gold(I)-Catalyzed [2 + 2]-Cycloaddition of Allenenes, J. Am.
Chem. Soc, 129, 12402-12403 (2007).
Asa D. Melhado, Marco Luparia and F. Dean Toste, Au(I)catalyzed enantioselective 1,3-dipolar cycloadditions of munchnones with electron-deficient alkenes, J. Am. Chem. Soc,
129, 12638-12639 (2007).
Kristine A. Nolin, Jennifer R. Krumper, Michael D. Pluth,
Robert G. Bergman and F. Dean Toste, Analysis of an unprecedented mechanism for the catalytic hydrosilylation of
carbonyl compounds, J. Am. Chem. Soc, 129, 14684-14696
(2007).
Vincent S. Chan, Robert G. Bergman and F. Dean Toste,
Pd-Catalyzed Dynamic Kinetic Enantioselective Arylation of
Silylphosphines, J. Am. Chem. Soc, 129, 15122-15123
(2007).
Rebecca L. LaLonde, Benjamin D. Sherry, Eun Joo Kang
and F. Dean Toste, Gold(I)-Catalyzed Enantioselective Intramolecular Hydroamination of Allenes, J. Am. Chem. Soc,
129, 2452-2453 (2007).
Britton K. Corkey and F. Dean Toste, Palladium-Catalyzed
Enantioselective Cyclization of Silyloxy-1,6-Enynes, J. Am.
Chem. Soc, 129, 2764-2765 (2007).
Nathan D. Shapiro and F. Dean Toste, Rearrangement of
Alkynyl Sulfoxides Catalyzed by Gold(I) Complexes, J. Am.
Chem. Soc, 129, 4160-4161 (2007).
Cole A. Witham, Pablo Mauleon, Nathan D. Shapiro, Benjamin D. Sherry and F. Dean Toste, Gold(I)-catalyzed oxidative rearrangements, J. Am. Chem. Soc, 129, 5838-5839
(2007).
Ellen C. Minnihan, Steven L. Colletti, F. Dean Toste and
Hong C. Shen, Gold(I)-Catalyzed Regioselective Cyclizations of Silyl Ketene Amides and Carbamates with Alkynes,
J. Org. Chem, 72, 6287-6289 (2007).
David J. Gorin and F. Dean Toste, Relativistic effects in
homogeneous gold catalysis, Nature (London, U. K.), 446,
395-403 (2007).
Gregory L. Hamilton, Eun Joo Kang, Miriam Mba and F.
Dean Toste, A powerful chiral counterion strategy for asymmetric transition metal catalysis, Science (Washington, DC,
U. S.), 317, 496-499 (2007).
Alexander T. Radosevich, Vincent S. Chan, Hui-Wen Shih
and F. Dean Toste, Synthesis of (-)-octalactin A by a strategic vanadium-catalyzed oxidative kinetic resolution, Angew.
Chem., Int. Ed, 47, 3755-3758 (2008).
David J. Gorin, Benjamin D. Sherry and F. Dean Toste, Ligand Effects in Homogeneous Au Catalysis, Chem. Rev.
(Washington, DC, U. S.), 108, 3351-3378 (2008).
Gregory L. Hamilton, Toshio Kanai and F. Dean Toste,
Chiral Anion-Mediated Asymmetric Ring Opening of mesoAziridinium and Episulfonium Ions, J. Am. Chem. Soc, 130,
14984-14986 (2008).
David J. Gorin, Iain D. G. Watson and F. Dean Toste, Fluorenes and Styrenes by Au(I)-Catalyzed Annulation of Enynes and Alkynes, J. Am. Chem. Soc, 130, 3736-3737 (2008).
Jennifer M. Schomaker, W. Christopher Boyd, Ian C.
Stewart, F. Dean Toste and Robert G. Bergman, Cobalt Dinitrosoalkane Complexes in the C-H Functionalization of Olefins, J. Am. Chem. Soc, 130, 3777-3779 (2008).
Paul Ha-Yeon Cheong, Philip Morganelli, Michael R. Luzung, K. N. Houk and F. Dean Toste, Gold-Catalyzed Cycloisomerization of 1,5-Allenynes via Dual Activation of an Ene
Reaction, J. Am. Chem. Soc, 130, 4517-4526 (2008).
Nathan D. Shapiro and F. Dean Toste, Synthesis of Azepines by a Gold-Catalyzed Intermolecular [4 + 3]-Annulation, J. Am. Chem. Soc, 130, 9244-9245 (2008).
Steven G. Sethofer, Steven T. Staben, Olivia Y. Hung and
F. Dean Toste, Au(I)-Catalyzed Ring Expanding Cycloisomerizations: Total Synthesis of Ventricosene, Org. Lett, 10,
4315-4318 (2008).
Nathan D. Shapiro and F. Dean Toste, Synthesis and structural characterization of isolable phosphine coinage metal ␲complexes, Proc. Natl. Acad. Sci. U. S. A, 105, 2779-2782
(2008).
Christine Musich, Part I: Synthesis of a novel class of lipoxygenase inhibitors. Part II: Development of a Vanadium
(V)-catalyzed oxidative kinetic resolution and a gold(I)-catalyzed cycloisomerization. (M)
Michael Salvatore Sangi, Development of rhenium(V)-oxo
catalysts for the enantioselective oxidation of sulfides to sulfoxides. (M)
Alexander Thomas Radosevich, Application of rhenium-
and vanadium-oxo complexes as catalysts in organic synthesis. (D)
Benjamin Dunlap Sherry, The application of gold(I) and
rhenium(V) complexes to homogeneous catalysis. (D)
Britton Kenneth Corkey, Enantioselective Pd(II) catalyzed
1,6-enyne cyclizations; methodology development and application to total synthesis. (D)
David Joel Gorin, Stabilized cationic reaction intermediates in homogeneous gold catalysis. (D)
Kristine Anne Nolin, Reversing the role of the metal-oxygen pi-bond: Rhenium(V) catalyzed hydrosilylations. (D)
Michael Rivera Luzung, The development and application
of gold(I)-catalyzed cyclizations and rearrangements. (D)
Olivia Y. Hung, Carbon-carbon bond forming reactions
catalyzed by rhenium(V)-oxo and cationic phosphinegold(I)
complexes. (D)
Steven Thomas Staben, Development and application of
new strategies for the functionalization of unsaturated molecules. Part 1. Catalytic asymmetric 1,4-dioxygenation of 1,3dienes. Part 2. Gold(I)-catalyzed addition of carbon nucleophiles to alkynes. (D)
Vincent Sai Ho Chan, Development of transition metalcatalyzed methods for the enantioselective synthesis of Pstereogenic phosphines. (D)
TRAUNER, DIRK (b.1967) Assistant Professor. B.Sc,
1995, Free University, Berlin, Germany; Ph.D, 1997,
University of Vienna, Austria. Postdoctoral Fellow,
1998-2000, Memorial Sloan-Kettering Cancer Center.
Neuroscience; Organic Chemistry. Our research centers
on the total synthesis of complex natural products and rationally designed molecular probes and their application
to biological problems, especially in neuroscience. TEL:
(510) 643-5507 FAX: (510) 643-9480
Web: www.cchem.berkeley.edu/trngrp/traunerweb/
Email: trauner@berkeley.edu
Publication list has not been verified by the department.
Stefan N. Gradl and Dirk Trauner, The Meerwein-Eschenmoser-Claisen rearrangement, Claisen Rearrange, 367-396
(2007).
Jeremiah P. Malerich, Thomas J. Maimone, Gregory I. Elliott and Dirk Trauner, Biomimetic synthesis of antimalarial
naphthoquinones. [Erratum to document cited in CA143:
026738], J. Am. Chem. Soc, 129, 1836 (2007).
Matthew Volgraf, Pau Gorostiza, Stephanie Szobota, Max
R. Helix, Ehud Y. Isacoff and Dirk Trauner, Reversibly
Caged Glutamate: A Photochromic Agonist of Ionotropic
Glutamate Receptors, J. Am. Chem. Soc, 129, 260-261
(2007).
Paul A. Roethle, Ingrid T. Chen and Dirk Trauner, Total
Synthesis of (-)-Archazolid B, J. Am. Chem. Soc, 129, 89608961 (2007).
Sheng Wang, Stephanie Szobota, Yuan Wang, Matthew
Volgraf, Zhaowei Liu, Cheng Sun, Dirk Trauner, Ehud Y. Isacoff and Xiang Zhang, All Optical Interface for Parallel, Remote, and Spatiotemporal Control of Neuronal Activity,
Nano Lett, 7, 3859-3863 (2007).
Stephanie Szobota, Pau Gorostiza, Filippo Del Bene,
Claire Wyart, Doris L. Fortin, Kathleen D. Kolstad, Orapim
Tulyathan, Matthew Volgraf, Rika Numano, Holly L. Aaron,
Ethan K. Scott, Richard H. Kramer, John Flannery, Herwig
Baier, Dirk Trauner and Ehud Y. Isacoff, Remote control of
neuronal activity with a light-gated glutamate receptor, Neuron, 54, 535-545 (2007).
Erica M. Wilson and Dirk Trauner, Concise Synthesis of
the Bacterial DNA Primase Inhibitor (+)-Sch 642305, Org.
Lett, 9, 1327-1329 (2007).
Matthew J. Comstock, Niv Levy, Armen Kirakosian, Jongweon Cho, Frank Lauterwasser, Jessica H. Harvey, David A.
Strubbe, Jean M. J. Frechet, Dirk Trauner, Steven G. Louie
and Michael F. Crommie, Reversible Photomechanical
Switching of Individual Engineered Molecules at a Metallic
Surface, Phys. Rev. Lett, 99, 038301/1-038301/4 (2007).
Pau Gorostiza, Matthew Volgraf, Rika Numano, Stephanie
Szobota, Dirk Trauner and Ehud Y. Isacoff, Mechanisms of
photoswitch conjugation and light activation of an ionotropic
glutamate receptor, Proc. Natl. Acad. Sci. U. S. A, 104,
10865-10870 (2007).
Carla P. Rosa, Michael A. Kienzler, Brooke S. Olson, Guangxin Liang and Dirk Trauner, Total synthesis of smenochromene B through ring contraction, Tetrahedron, 63, 65296534 (2007).
Jessica H. Harvey, Brandon K. Butler and Dirk Trauner,
Functionalized azobenzenes through cross-coupling with
organotrifluoroborates, Tetrahedron Lett, 48, 1661-1664
(2007).
Lee M. Bishop, Jennifer E. Barbarow, Robert G. Bergman
and Dirk Trauner, Catalysis of 6␲ electrocyclizations, Angew. Chem., Int. Ed, 47, 8100-8103 (2008).
Lee M. Bishop, Michael Winkler, Kendall N. Houk, Robert G. Bergman and Dirk Trauner, Mechanistic investigations
of the acid-catalyzed cyclization of a vinyl ortho-quinone
methide, Chem.—Eur. J, 14, 5405-5408 (2008).
Michael A. Kienzler, Sandy Suseno and Dirk Trauner, Vinyl Quinones as Diels-Alder Dienes: Concise Synthesis of (-)
-Halenaquinone, J. Am. Chem. Soc, 130, 8604-8605 (2008).
Jean-Philip Lumb, Kevin C. Choong and Dirk Trauner, ortho-Quinone Methides from para-Quinones: Total Synthesis
of Rubioncolin B, J. Am. Chem. Soc, 130, 9230-9231 (2008).
Matthew Volgraf, Jean-Philip Lumb, Harry C. Brastianos,
Gavin Carr, Marco K. W. Chung, Martin Muenzel, A. Grant
Mauk, Raymond J. Andersen and Dirk Trauner, Biomimetic
synthesis of the IDO inhibitors exiguamine A and B, Nat.
Chem. Biol, 4, 535-537 (2008).
Doris L. Fortin, Matthew R. Banghart, Timothy W. Dunn,
Katharine Borges, Daniel A. Wagenaar, Quentin Gaudry,
Movses H. Karakossian, Thomas S. Otis, William B. Kristan,
Dirk Trauner and Richard H. Kramer, Photochemical control
of endogenous ion channels and cellular excitability, Nat.
Methods, 5, 331-338 (2008).
Paul A. Roethle and Dirk Trauner, The chemistry of marine furanocembranoids, pseudopteranes, gersolanes, and related natural products, Nat. Prod. Rep, 25, 298-317 (2008).
Christian Ader, Robert Schneider, Soenke Hornig, Phanindra Velisetty, Erica M. Wilson, Adam Lange, Karin Giller,
Iris Ohmert, Marie-France Martin-Eauclaire, Dirk Trauner,
Stefan Becker, Olaf Pongs and Marc Baldus, A structural
link between inactivation and block of a K+ channel, Nat.
Struct. Mol. Biol, 15, 605-612 (2008).
Vladimir Sofiyev, Gabriel Navarro and Dirk Trauner,
Biomimetic Synthesis of the Shimalactones, Org. Lett, 10,
149-152 (2008).
Ellen D. Beaulieu, Leah Voss and Dirk Trauner, Conjugate
Addition of Allyl Stannanes with Concomitant Triflation,
Org. Lett, 10, 869-872 (2008).
VOLLHARDT, KURT PETER CHRISTIAN
(b.1946) Professor. Vordipl, 1967, University of Munich;
Ph.D, 1972, University College, London. Research Fellowship, 1972-1974, California Institute of Technology.
Organic Chemistry; Organometallic Chemistry. Transition metals in organic synthesis, organometallic clusters
in catalysis; potentially catalytic and conducting polyorganometals; strain and electronically activated systems; natural products; new synthetic methods; gas phase
pyrolyses. TEL: (510) 642-0286 FAX: (510) 643-5208
Web: www.chem.berkeley.edu/people/faculty/vollhardt/
vollhardt.html
Email: kpcv@berkeley.edu
No publication information submitted for this edition.
WEMMER, DAVID EARL (b.1951) Professor. B.S,
1973, University of California, Davis; Ph.D, 1979, University of California, Berkeley. Postdoctoral Fellow,
1979, Universitat Dortmund. Biophysics/Biophysical
Chemistry; Structural Biology. Structure, dynamics and
interactions of biopolymers studied by NMR and x-ray
diffraction. TEL: (510) 666-2683 FAX: (510) 666-3384
Web: www.chem.berkeley.edu/~wemmer/home.html
Email: dewemmer@berkeley.edu
No publication information submitted for this edition.
WHALEY, KATHARINE BIRGITTA (b.1956)
Professor. B.A, 1978, St. Hilda’s College, Oxford University; M.S, 1982, University of Chicago; Ph.D, 1984,
University of Chicago. Golda Meir Research Fellow,
1984-1985, Hebrew University, Jerusalem; Postdoctoral
Fellowship, 1985-1986, Tel Aviv University. Theoretical
Chemistry. Quantum Information and Computation,
Quantum mechanics of clusters and nanomaterials,
Chemical Physics. TEL: (510) 643-6820 FAX: (510)
643-0003
Web: www.cchem.berkeley.edu/kbwgrp/
Email: whaley@berkeley.edu
K.-P. Marzlin, R. Karasik, B. C. Sanders and K. B. Whaley, Decoherence-free subspaces and spontaneous emission
cancellation, Can. J. Phys, 85, 641 (2007).
A. Viel, K. B. Whaley and R. J. Wheatley, Blueshift and
intramolecular tunneling of NH3 umbrella mode in 4Hen
clusters, J. Chem. Phys, 127, 194303 (2007).
R. E. Zillich and K. B. Whaley, Solvation structure and rotational dynamics of LiH in 4He clusters, J. Phys. Chem. A,
111, 7489 (2007).
F. Paesani, K. B. Whaley, G. E. Douberly and R. E. Miller,
Rovibrational spectra for the HCCCN•HCN and
HCN•HCCCN binary complexes in 4He droplets, J. Phys.
Chem. A, 111, 7516 (2007).
R. Karasik, K.-P. Marzlin, B. C. Sanders and K. B. Whaley, Multiparticle decoherence-free subspaces in extended
systems, Phys. Rev. A, 76, 012331 (2007).
J. Korsbakken, K. B. Whaley, J. DuBois and J. I. Cirac,
Measurement-based measure of the size of macroscopic
quantum superpositions, Phys. Rev. A, 75, 042106 (2007).
M. Sarovar and K. B. Whaley, Adaptive homodyne phase
discrimination and qubit measurement, Phys. Rev. A, 76,
052316 (2007).
R. E. Zillich, K. B. Whaley and K. von Haeften, Lineshape
of rotational spectrum of CO in 4He droplets, J. Chem. Phys,
128, 094303 (2008).
P. Kuopanportti, M. Möttönen, V. Bergholm, O. P. Saira,
J. Zhang and K. B. Whaley, Suppression of 1/f[sup alpha]
noise in one-qubit systems, Phys. Rev. A, 77, 032334 (2008).
R. Karasik, K.-P. Marzlin, B. Sanders and K. B. Whaley,
Criteria for dynamically stable decoherence-free subspaces
and incoherently generated coherences, Phys. Rev. A, 77,
052301 (2008).
T. R. Beals, J. Vala and K. B. Whaley, Scalability of quan-
CALIFORNIA, BERKELEY
tum computation with addressable optical lattices, Phys. Rev.
A, 77, 052309 (2008).
J. Fern and K. B. Whaley, Lower bounds on the nonzero
capacity of Pauli channels, Phys. Rev. A, 78, 062335 (2008).
M. Sarovar, K. C. Young, T. Schenkel and K. B. Whaley,
Quantum non-demolition measurements of single donor
spins in semiconductors, Phys. Rev. B, 78, 245302 (2008).
Heather Whitley, Bosonic helium in nanoscale environments: Adsorption, energetics and superfluidity. (D)
Jan Ivar Korsbakken, Schrodinger’s lion or Schrodinger’s
kitten?—Gauging the size of large quantum superposition
states. (D)
Jesse Fern, Calculations of quantum error correction and
fault tolerance thresholds. (D)
Travis Beals, Quantum communication and information
processing. (D)
WILLIAMS, EVAN ROWLAND (b.1962) Professor. B.S, 1984, University of Virginia; M.S, 1986, Cornell University; Ph.D, 1990, Cornell University. NSF
Postdoctoral Fellowship, 1989-1991, Stanford University. Analytical Chemistry; Biophysics/Biophysical Chemistry. Structure of biomolecules and macromolecular assemblies by two-dimensional mass spectrometry, spectroscopy and computational chemistry; effects of hydration on structure; development of chemical instrumentation and the combination of state-of-the-art separations
with 2-D mass spectrometry for ultra—trace chemical
analysis and proteomics applications. TEL: (510) 6437161 FAX: (510) 642-7714
Web: www.cchem.berkeley.edu/~erwgrp/index.html
Email: williams@cchem.berkeley.edu
M. F. Bush, R. J. Saykally and E. R. Williams, Hydration
of the calcium dication: Direct evidence for second shell formation from infrared spectroscopy, ChemPhyChem, 8, 22452253 (2007).
E. W. Robinson, R. E. Sellon and E. R. Williams, Peak deconvolution in high-field asymmetric waveform ion mobility
mass spectrometry (FAIMS) to characterize macromolecular
conformations, Int. J. Mass Spectrom, 259, 87-95 (2007).
M. F. Bush, J. S. Prell, R. J. Saykally and E. R. Williams,
One water molecule stabilizes the cationized arginine zwitterion, J. Am. Chem. Soc, 129, 13544-13553 (2007).
M. F. Bush, J. T. O’Brien, J. S. Prell, R. J. Saykally and E.
R. Williams, Infrared spectroscopy of cationized arginine in
the gas phase: Direct evidence for the transition from nonzwitterionic to zwitterionic structure, J. Am. Chem. Soc, 129,
1612-1622 (2007).
M. F. Bush, R. J. Saykally and E. R. Williams, Evidence
for water rings in the hexahydrated sulfate dianion from IR
spectroscopy, J. Am. Chem. Soc, 129, 2220-2221 (2007).
R. D. Leib, W. A. Donald, M. F. Bush, J. T. O’Brien and
E. R. Williams, Internal energy deposition in electron capture
dissociation measured using hydrated divalent metal ions as
nanocalorimeters, J. Am. Chem. Soc, 129, 4894-4895 (2007).
R. D. Leib, W. A. Donald, J. T. O’Brien, M. F. Bushand
and E. R. Williams, Reduction potential of 1 M aqueous ruthenium(III)hexaammine in the gas phase: A route towards
establishing an absolute electrochemical scale, J. Am. Chem.
Soc, 129, 7716-7717 (2007).
R. D. Leib, W. A. Donald, M. F. Bush, J. T. O’Brien and
E. R. Williams, Nonergodicity in electron capture dissociation investigation using hydrated ion nanocalorimetry, J. Am.
Soc. Mass Spectrom, 18, 1217-1231 (2007).
M. W. Forbes, M. F. Bush, N. C. Polfer, J. Oomens, R. C.
Dunbar, E. R. Williams and R. A. Jockusch, Infrared spectroscopy of arginine cation complexes: Direct observation of
gas-phase zwitterions, J. Phys. Chem. A, 111, 11759-11770
(2007).
M. F. Bush, M. W. Forbes, R. A. Jockusch, J. Oomens, N.
C. Polfer, R. J. Saykally and E. R. Williams, Infrared spectroscopy of cationized lysine and e-N-methyl-lysine in the
gas phase: Effects of alkali metal ion size and proton affinity
on zwitterion stability, J. Phys. Chem. A, 111, 7753-7760
(2007).
A. I. S. Holm, P. Hvelplund, U. Kadhane, M. K. Larsen, B.
Liu, S. B. Nielsen, S. Panja, J. M. Pedersen, T. Skrydstrup,
K. Støchkel, E. R. Williams and E. S. Worma, On the mechanism of electron-capture induced dissociation of peptide dications from 15N-labeling and crown-ether complexation, J.
Phys. Chem. A, 111, 9641-9643 (2007).
A. I. S. Holm, M. K. Larsen, S. Panja, P. Hvelplund, S. B.
Nielsen, R. D. Leib, W. A. Donald, E. R. Williams, C. Hao
and F. Turecek, Electron capture, femtosecond electron
transfer and theory: A study of noncovalent crown ether 1,ndiammonium alkane complexes, Int. J. Mass Spectrom, 276,
116-126 (2008).
J. S. Prell, J. T. O’Brien, A. I. S. Holm, R. D. Leib, W. A.
Donald and E. R. Williams, Electron capture by a hydrated
gaseous peptide: Effects of water on fragmentation and molecular survival, J. Am. Chem. Soc, 130, 12680-12689
(2008).
M. F. Bush, R. J. Saykally and E. R. Williams, Infrared action spectra of Ca2+(H2O)11-69 exhibit spectral signatures for
condensed-phase structures with increasing cluster size, J.
Am. Chem. Soc, 130, 15482-15489 (2008).
W. A. Donald, R. D. Leib, J. T. O’Brien, M. F. Bush and
E. R. Williams, The absolute standard hydrogen electrode
potential measured by reduction of aqueous nanodrops in the
gas phase, J. Am. Chem. Soc, 130, 3371-3381 (2008).
M. F. Bush, J. Oomens, R. J. Saykally and E. R. Williams,
Effects of alkaline earth metal complexation on amino acid
zwitterion stability: Results from infrared action spectroscopy, J. Am. Chem. Soc, 130, 6463-6471 (2008).
M. F. Bush, R. J. Saykally and E. R. Williams, Reactivity
and infrared spectroscopy of gaseous hydrated trivalent metal
ions, J. Am. Chem. Soc, 130, 9122-9128 (2008).
J. T. O’Brien, J. S. Prell, A. I. S. Holm and E. R. Williams,
Effects of electron kinetic energy and ion-electron inelastic
in electron capture dissociation measured using ion nanocalorimetry, J. Am. Soc. Mass Spectrom, 19, 772-779 (2008).
A. I. S. Holm, W. A. Donald, P. Hvelplund, M. K. Larsen,
S. B. Nielsen and E. R. Williams, Investigation of energy deposited by femtosecond electron transfer in collisions using
hydrated ion nanocalorimetry, J. Phys. Chem. A, 112, 1072110727 (2008).
W. A. Donald and E. R. Williams, Evaluation of different
implementations of the thomson liquid drop model: Comparison to monovalent and divalent cluster ion experimental data,
J. Phys. Chem. A, 112, 3515-3522 (2008).
J. T. O’Brien and E. R. Williams, Hydration of gaseous
copper dications probed by IR action spectroscopy, J. Phys.
Chem. A, 112, 5893-5901 (2008).
M. F. Bush, J. Oomens, R. J. Saykally and E. R. Williams,
Alkali metal ion binding to glutamine and glutamine derivatives investigated by infrared action spectroscopy and theory,
J. Phys. Chem. A, 112, 8578-8584 (2008).
J. T. O’Brien, J. S. Prell, J. D. Steill, J. Oomens and E. R.
Williams, Interactions of mono- and divalent metal ions with
aspartic and glutamic acid investigated with IR photodissociation spectroscopy and theory, J. Phys. Chem. A, 112, 1082310830 (2008).
W. A. Donald, R. D. Leib, J. T. O’Brien, A. I. S. Holm and
E. R. Williams, Nanocalorimetry in mass spectrometry: A
route to understanding ion and electron solvation, Proc. Natl.
Acad. Sci. USA, 105, 18102-18107 (2008).
Matthew F. Bush, Infrared spectroscopy of hydrated and
biomolecular ions. (D)
Sanjay Krishnaswamy, ESI-Mass spectrometric investigation of the barnase/barstar interaction. (D)
XU, TING
No publication information submitted for this edition.
YANG, HAW (b.1969) Assistant Professor. B.S, 1991,
National Taiwan University; Ph.D, 1999, University of
California, Berkeley. Postdoctoral Associate, 1999-2002,
Harvard University. Biophysics/Biophysical Chemistry;
Physical Chemistry. Single-molecule studies of biological and materials systems. TEL: (609) 258-3900 FAX:
(609) 258-6746
Web: www.princeton.edu/~yanglab
Email: hawyang@princeton.edu
Sha Li, L. Meadow Anderson, Jui-Ming Yang, Liwei Lin
and Haw Yang, DNA transformation via local heat shock,
Appl. Phys. Lett, 91, 013902/1-013902/3 (2007).
C. Shan Xu, Hahkjoon Kim, Haw Yang and Carl C. Hayden, Multiparameter Fluorescence Spectroscopy of Single
Quantum Dot-Dye FRET Hybrids, J. Am. Chem. Soc, 129,
11008-11009 (2007).
Haw Yang, Single-Particle Light Scattering: Imaging and
Dynamical Fluctuations in the Polarization and Spectral Response, J. Phys. Chem. A, 111, 4987-4997 (2007).
C. Shan Xu, Hu Cang, Daniel Montiel and Haw Yang,
Rapid and Quantitative Sizing of Nanoparticles Using ThreeDimensional Single-Particle Tracking, J. Phys. Chem. C,
111, 32-35 (2007).
Sha Li, Kai Zhang, Jui-Ming Yang, Liwei Lin and Haw
Yang, Single Quantum Dots as Local Temperature Markers,
Nano Lett, 7, 3102-3105 (2007).
Jeffrey A. Hanson, Karl Duderstadt, Lucas P. Watkins, Sucharita Bhattacharyya, Jason Brokaw, Jhih-Wei Chu and
Haw Yang, Illuminating the mechanistic roles of enzyme
conformational dynamics, Proc. Natl. Acad. Sci. U. S. A,
104, 18055-18060 (2007).
Hu Cang, C. Shan Xu and Haw Yang, Progress in singlemolecule tracking spectroscopy, Chem. Phys. Lett, 457, 285291 (2008).
Hu Cang, Daniel Montiel, C. Shan Xu and Haw Yang, Observation of spectral anisotropy of gold nanoparticles, J.
Chem. Phys, 129, 044503/1-044503/5 (2008).
Haw Yang, Detection and characterization of dynamical
heterogeneity in an event series using wavelet correlation, J.
Chem. Phys, 129, 074701/1-074701/11 (2008).
Jeffery A. Hanson and Haw Yang, A general statistical test
for correlations in a finite-length time series, J. Chem. Phys,
128, 214101/1-214101/6 (2008).
Daniel Montiel and Haw Yang, Observation of Correlated
Emission Intensity and Polarization Fluctuations in Single
CdSe/ZnS Quantum Dots, J. Phys. Chem. A, 112, 9352-9355
(2008).
Jeffery A. Hanson and Haw Yang, Quantitative Evaluation
of Cross Correlation Between Two Finite-Length Time Series with Applications to Single-Molecule FRET, J. Phys.
Chem. B, 112, 13962-13970 (2008).
C. Shan Xu, Hahkjoon Kim, Carl C. Hayden and Haw
Yang, Joint Statistical Analysis of Multichannel Time Series
15
from Single Quantum Dot-(Cy5)n Constructs, J. Phys. Chem.
B, 112, 5917-5923 (2008).
Chun-Biu Li, Haw Yang and Tamiki Komatsuzaki, Multiscale complex network of protein conformational fluctuations
in single-molecule time series, Proc. Natl. Acad. Sci. U. S. A,
105, 536-541 (2008).
L. Meadow Anderson and Haw Yang, DNA looping can
enhance lysogenic CI transcription in phage lambda, Proc.
Natl. Acad. Sci. U. S. A, 105, 5827-5832 (2008).
Kai Zhang, Methodology development for single molecule
/ particle optical study of biological systems. (D)
YANG, PEIDONG (b.1971) Professor of Chemistry.
B.S, 1993, Univ. Sci. Tech. Chi; Ph.D, 1997, Harvard
University. Postdoctoral Fellow, 1998, University of California, Santa Barbara. Inorganic Chemistry; Materials
Chemistry. Research interests include the synthesis of
new classes of materials and nanostructures, with an emphasis on developing new synthetic approaches and understanding the fundamental issues of structural assembly and growth that will enable the rational control of
material composition, micro/nano-structure, property and
functionality. We are interested in the fundamental problems of electron, photon, and phonon confinement as
well as spin manipulation within 1-dimensional nanostructures. TEL: (510) 643-1545 FAX: (510) 642-7301
Web: www.cchem.berkeley.edu/~pdygrp/main.html
Email: p_yang@berkeley.edu
Erik C. Garnett, Wenjie Liang and Peidong Yang, Growth
and electrical characteristics of platinum-nanoparticle-catalyzed silicon nanowires, Adv. Mater. (Weinheim, Ger.), 19,
2946-2950 (2007).
Melissa Fardy, Allon I. Hochbaum, Joshua Goldberger,
Minjuan M. Zhang and Peidong Yang, Synthesis and thermoelectrical characterization of lead chalcogenide nanowires, Adv. Mater. (Weinheim, Ger.), 19, 3047-3051 (2007).
Donald J. Sirbuly, Andrea Tao, Matt Law, Rong Fan and
Peidong Yang, Multifunctional nanowire evanescent wave
optical sensors, Adv. Mater. (Weinheim, Ger.), 19, 61-66
(2007).
Woong Kim, Mingquan Guo, Peidong Yang and Daojing
Wang, Microfabricated Monolithic Multinozzle Emitters for
Nanoelectrospray Mass Spectrometry, Anal. Chem. (Washington, DC, U. S.), 79, 3703-3707 (2007).
Jiaxing Huang, Rong Fan, Stephen Connor and Peidong
Yang, One-step patterning of aligned nanowire arrays by programmed dip coating, Angew. Chem., Int. Ed, 46, 2414-2417
(2007).
Matt Law, Donald J. Sirbuly and Peidong Yang, Chemical
sensing with nanowires using electrical and optical detection,
Int. J. Nanotechnol, 4, 252-262 (2007).
Woong Kim, Jennifer K. Ng, Miki E. Kunitake, Bruce R.
Conklin and Peidong Yang, Interfacing Silicon Nanowires
with Mammalian Cells, J. Am. Chem. Soc, 129, 7228-7229
(2007).
Taleb Mokari, Minjuan Zhang and Peidong Yang, Shape,
Size, and Assembly Control of PbTe Nanocrystals, J. Am.
Chem. Soc, 129, 9864-9865 (2007).
Yawen Zhang, Michael E. Grass, Susan E. Habas, Feng
Tao, Tianfu Zhang, Peidong Yang and Gabor A. Somorjai,
One-step Polyol Synthesis and Langmuir-Blodgett Monolayer Formation of Size-tunable Monodisperse Rhodium Nanocrystals with Catalytically Active (111) Surface Structures, J.
Phys. Chem. C, 111, 12243-12253 (2007).
Lori E. Greene, Matt Law, Benjamin D. Yuhas and Peidong Yang, ZnO-TiO2 Core-Shell Nanorod/P3HT Solar
Cells, J. Phys. Chem. C, 111, 18451-18456 (2007).
Alvaro San Paulo, Noel Arellano, Jose A. Plaza, Rongrui
He, Carlo Carraro, Roya Maboudian, Roger T. Howe, Jeff
Bokor and Peidong Yang, Suspended Mechanical Structures
Based on Elastic Silicon Nanowire Arrays, Nano Lett, 7,
1100-1104 (2007).
X. L. Feng, Rongrui He, Peidong Yang and M. L. Roukes,
Very High Frequency Silicon Nanowire Electromechanical
Resonators, Nano Lett, 7, 1953-1959 (2007).
Kaitlin M. Bratlie, Hyunjoo Lee, Kyriakos Komvopoulos,
Peidong Yang and Gabor A. Somorjai, Platinum Nanoparticle Shape Effects on Benzene Hydrogenation Selectivity,
Nano Lett, 7, 3097-3101 (2007).
Benjamin D. Yuhas, Sirine Fakra, Matthew A. Marcus and
Peidong Yang, Probing the Local Coordination Environment
for Transition Metal Dopants in Zinc Oxide Nanowires,
Nano Lett, 7, 905-909 (2007).
Susan E. Habas, Hyunjoo Lee, Velimir Radmilovic, Gabor
A. Somorjai and Peidong Yang, Shaping binary metal nanocrystals through epitaxial seeded growth, Nat. Mater, 6, 692697 (2007).
Tevye Kuykendall, Philipp Ulrich, Shaul Aloni and Peidong Yang, Complete composition tunability of InGaN nanowires using a combinatorial approach, Nat. Mater, 6, 951956 (2007).
Andrea Tao, Prasert Sinsermsuksakul and Peidong Yang,
Tunable plasmonic lattices of silver nanocrystals, Nat. Nanotechnol, 2, 435-440 (2007).
Yuri Nakayama, Peter J. Pauzauskie, Aleksandra Radenovic, Robert M. Onorato, Richard J. Saykally, Jan Liphardt
and Peidong Yang, Tunable nanowire nonlinear optical
probe, Nature (London, U. K.), 447, 1098-1101 (2007).
Andrea R. Tao, Jiaxing Huang and Peidong Yang, Lang-
16
CALIFORNIA, BERKELEY
muir-Blodgettry of Nanocrystals and Nanowires, Acc. Chem.
Res, 41, 1662-1673 (2008).
Taleb Mokari, Susan E. Habas, Minjuan Zhang and Peidong Yang, Synthesis of lead chalcogenide alloy and coreshell nanowires, Angew. Chem., Int. Ed, 47, 5605-5608
(2008).
Martin Mulvihill, Andrea Tao, Kanokraj Benjauthrit, John
Arnold and Peidong Yang, Surface-enhanced Raman spectroscopy for trace arsenic detection in contaminated water,
Angew. Chem., Int. Ed, 47, 6456-6460 (2008).
Peidong Yang, Chemistry and physics of silicon nanowire,
Dalton Trans, 4387-4391 (2008).
Susan E. Habas, Peidong Yang and Taleb Mokari, Selective Growth of Metal and Binary Metal Tips on CdS Nanorods, J. Am. Chem. Soc, 130, 3294-3295 (2008).
Hyunjoo Lee, Susan E. Habas, Gabor A. Somorjai and Peidong Yang, Localized Pd Overgrowth on Cubic Pt Nanocrystals for Enhanced Electrocatalytic Oxidation of Formic Acid,
J. Am. Chem. Soc, 130, 5406-5407 (2008).
Yawen Zhang, Michael E. Grass, John N. Kuhn, Feng Tao,
Susan E. Habas, Wenyu Huang, Peidong Yang and Gabor A.
Somorjai, Highly Selective Synthesis of Catalytically Active
Monodisperse Rhodium Nanocubes, J. Am. Chem. Soc, 130,
5868-5869 (2008).
Erik C. Garnett and Peidong Yang, Silicon Nanowire Radial p-n Junction Solar Cells, J. Am. Chem. Soc, 130, 92249225 (2008).
Robert M. Rioux, Russell Komor, Hyunjoon Song, James
D. Hoefelmeyer, Michael Grass, Krisztian Niesz, Peidong
Yang and Gabor A. Somorjai, Kinetics and mechanism of
ethylene hydrogenation poisoned by CO on silica-supported
monodisperse Pt nanoparticles, J. Catal, 254, 1-11 (2008).
Yawen Zhang, Wenyu Huang, Susan E. Habas, John N.
Kuhn, Michael E. Grass, Yusuke Yamada, Peidong Yang and
Gabor A. Somorjai, Near-Monodisperse Ni-Cu Bimetallic
Nanocrystals of Variable Composition: Controlled Synthesis
and Catalytic Activity for H2 Generation, J. Phys. Chem. C,
112, 12092-12095 (2008).
Michael E. Grass, Yao Yue, Susan E. Habas, Robert M.
Rioux, Chelsea I. Teall, Peidong Yang and Gabor A. Somorjai, Silver Ion Mediated Shape Control of Platinum Nanoparticles: Removal of Silver by Selective Etching Leads to Increased Catalytic Activity, J. Phys. Chem. C, 112, 4797-4804
(2008).
Robert M. Rioux, James D. Hoefelmeyer, Michael Grass,
Hyunjoon Song, Krisztian Niesz, Peidong Yang and Gabor
A. Somorjai, Adsorption and Co-adsorption of Ethylene and
Carbon Monoxide on Silica-Supported Monodisperse Pt Nanoparticles: Volumetric Adsorption and Infrared Spectroscopy Studies, Langmuir, 24, 198-207 (2008).
Robert M. Rioux, Hyunjoon Song, Peidong Yang and Gabor A. Samorjai, Platinum nanoclusters’ size and surface
structure sensitivity of catalytic reactions, Met. Nanoclusters
Catal. Mater. Sci.: Issue Size Control, 149-166 (2008).
Rongrui He, X. L. Feng, M. L. Roukes and Peidong Yang,
Self-transducing silicon nanowire electromechanical systems
at room temperature, Nano Lett, 8, 1756-1761 (2008).
Wenyu Huang, John N. Kuhn, Chia-Kuang Tsung, Yawen
Zhang, Susan E. Habas, Peidong Yang and Gabor A. Somorjai, Dendrimer Templated Synthesis of One Nanometer Rh
and Pt Particles Supported on Mesoporous Silica: Catalytic
Activity for Ethylene and Pyrrole Hydrogenation, Nano Lett,
8, 2027-2034 (2008).
Ziyang Huo, Chia-kuang Tsung, Wenyu Huang, Xiaofeng
Zhang and Peidong Yang, Sub-two nanometer single crystal
Au nanowires, Nano Lett, 8, 2041-2044 (2008).
Andrea R. Tao, Daniel P. Ceperley, Prasert Sinsermsuksakul, Andrew R. Neureuther and Peidong Yang, Self-Organized Silver Nanoparticles for Three-Dimensional Plasmonic
Crystals, Nano Lett, 8, 4033-4038 (2008).
Rong Fan, Seong Huh, Ruoxue Yan, John Arnold and Peidong Yang, Gated proton transport in aligned mesoporous silica films, Nat. Mater, 7, 303-307 (2008).
Arash Jamshidi, Peter J. Pauzauskie, P. James Schuck,
Aaron T. Ohta, Pei-Yu Chiou, Jeffrey Chou, Peidong Yang
and Ming C. Wu, Dynamic manipulation and separation of
individual semiconducting and metallic nanowires, Nat. Photonics, 2, 85-89 (2008).
Allon I. Hochbaum, Renkun Chen, Raul Diaz Delgado,
Wenjie Liang, Erik C. Garnett, Mark Najarian, Arun Majumdar and Peidong Yang, Enhanced thermoelectric performance
of rough silicon nanowires, Nature (London, U. K.), 451,
163-167 (2008).
Renkun Chen, Allon I. Hochbaum, Padraig Murphy, Joel
Moore, Peidong Yang and Arun Majumdar, Thermal Conductance of Thin Silicon Nanowires, Phys. Rev. Lett, 101,
105501/1-105501/4 (2008).