Session 2, 3rd year chemistry, Inorg. Chem. Dr Azad H. Mahdy The Ligand is an atom or a group of atoms are connected directly to a metal/s. Ligand is a lewis base molecule or ion have a lone electron pair that can be used to form a bond to a metal ion. The resulted bond is called Metal-Ligand coordinate covalent bond. Ligand types (in how to link the metal): monodentate (unidentate) is one bond to a metal ion. bidentate are two bonds to a metal ion. polydentate are more than two bonds to a metal ion, could be tridentate, tetradentate, penta, hexa, Monodentate Ligands Ligand Lewis structure Lewis structure name ligand name F- fluoride ion Cl - chloride ion Br - bromide ion I- iodide ion H2O Water Hydrate NH3 amonia OH - hydroxide ion CO carbon monoxide CN - cyanide ion SCN - thiocyanate ion 36 1 HOW TO NAME A LIGAND ? Ligand is a molecule or anion (sometimes cat-ion) Molecular name differ: water H2O is aqua, amonia NH3 is ammine when coordinated to the metal. Anions are named with the same anion name but ending “o” hydroxyl OH, OH- hydroxo, fluoride F, fluoro F -CO Carbonyl -CO3= -NH2CH2CH2H2N - carbonato ethylenediammine, (en) -OH- hydroxo -NH3 ammine -CN- cyano -NO2 -F- fluoro -O= -NO3- nitrato oxo -SCN- nitro thiocyanato -Br- bromo -O2- peroxo -NC- isocyano -I- iodo -SO4= sulfato -NCSisothiocyanato -ONO- nitrito -NO nitrosyl 37 Lewis structure Naming in coordination compounds could be long names without spaces. often, several groups of the ligand are involved in a complex. The number of ligand molecules per complex is indicated by a Greek prefix: mono- for 1, di(or bi) for 2, tri- for 3, tetra- for 4, penta- for 5, hexa for 6, hepta- for 7, octa- for 8, nona- for 9, deca- for 10. If the names of ligands already have one of these prefixes, the names are placed in parenthesis, ( ) 2 The prefixes for the number of ligands (already in di name) become bis-, tri becomes tris-, tetra is tetrakis-, pentakis- ... For neutral ligands, their normal names are not changed. Formula of Coordination Compound Cation then anion Ligands arranged in alphabetical order before metal ion, If the ligand is neutral, same molecule name given, with few exceptions. If the ligand anionic, change the -ide to -o The prefix indicates number of each. Oxidation state of metal ion should be in parenthesis ( ) only if more than one possible. If complex ion was anion, the metal ends with -ate Total charges of the complex must balance to zero Complex ion must put in brackets [ ] K2[Co(NH3)2Cl4] , [Co(NH3)4Cl2]Cl Almost no spaces involved in naming a complex inside brackets [ ] Spaces are required to name outside the [ ] Metal ions in complex anions Iron, Fe to be ferrate Copper , Cu to be cuprate Lead , Pb to be plumbate Silver , Ag to be argentate Gold, Au to be aurate Tin, Sn to be stannate 3 The last "e" in names of negative ions are changed to "o" in names of complexes. Sometimes "ide" is changed to "o“ : chloride → chloro -Cl- -CO3= -OH- hydroxide → hydroxo -S= or –S2- carbonate → carbonato sulfide → sulfido -O= oxide → oxo -ONO2nitrate → nitrato (when bonded through O-) -O2- peroxide, → peroxo -NO3nitrate → nitro (when bonded through N) -CN- cyanide → cyano -SCN- thiocyanate → thiocyanato-S (when bonded through S) -N3- azide → azido -NCS- thiocyanate → thiocyanato-N (when bonded through N) -NΞ or –N3- nitride → nitrido -NH2- amide → amido 42 For big ligands: C5H5N, pyridine, C5H4N-C5H4N, dipyridyl, P(C6H5)3, triphenylphosphine. NH2CH2CH2NHCH2CH2NH2, diethylenetriammine. Ligands as a group: HCO3− hydrogen carbonate CrO42− chromate CO32− carbonate Cr2O72− dichromate H3O+ hydr-oxonium PO43− phosphate or hydronium ClO4− perchlorate HPO42− hydrogen phosphate BO33− borate AsO43− arsenate HSO3− hydrogen sulfite MnO4− permanganate P3− phosphide NH4+ ammonium H2PO4− dihydrogen phosphate 43 Summary Name the cation then anion. Non ionic compounds are given one word name. Naming ligands first and naming the metal last. Ligands named in alphabetical order. Neutral ligands to be named as the same except water (aqua) , amonia (ammine). Anionic ligands are named by adding “o”, chloride becaomes chloro,.. 4 Number of ligands to follow Latin or Greek prefix to indicate how many are present, as: di, tri, tetra, penta,… if one of these are already there use: bis, tris, tetrakis, pentakis,.. In neutral cationic complex, the name of central metal is followed by its oxidation number in Roman numeral and put in parenthesis. In anionic complex, the suffix –ate is added to the name of the central metal. Examples Formula Nomenclature [Al(OH)4]- tetrahydroxoaluminumate(III) ion [Au(CN)2]- dicyanoaurate(I) ion [CoBr4]2- tetrabromocobaltate(II) ion [AlF6]3- hexafluoroaluminumate(III) ion cis-Pt(NH3)2Cl2 cis-diamminedichloroplatinum(II) [Cu(CN)2]- dicyanocuprate(I) ion trans-Cd(NH3)4Cl2 [MoO4]2- trans-tetraamminedichlorocadmium(II) permolybdate ion cis-Pt(NH3)2Cl2 cis-diamminedichloroplatinum(II) [Ni(CN)4]2- tetracyanonickelate(II) ion [Cd(CN)4]2- tetracyanocadmiumate(II) ion cis-Cd(NH3)4Cl2 cis-tetraamminedichlorocadmium(II) [MnCl6]4- hexachloromanganate(II) ion [FeCl4]- tetrachloroferrate(III) ion Na3[Co(CO3)3].3H2O [Co(NH3)5(CO3)] NO3 [Cr(C5H7O2)3] sodium tricarbonatocobalt(III) trihydrate pentaamminecarbonatocobalt(III) nitrate trisacetylacetonechromium(III) K4[Co2(C2O4)4(OH)2].3H2O potassium tetraoxalatodi-μ-hydroxocobalt(III) trihydrate K2 [PtCl4] potassium tetrachloroplatinate(II) [PtCl4]2- tetrachloroplatinate(II) ion [Co(en)2Cl2] Cl dichlorobis(ethylenediamine)cobalt(III) chloride 5 Nomenclature Formula potassium hexacyanoferrate(II) K4 [Fe(CN)6] tetraamminecuprate(II) sulfate [Cu(NH3)4] SO4 amminetrichloroplatinate(II) ion [Pt(NH3)Cl3]- pentaaquachlorochromium(III) sulfate [Cr(H2O)5Cl] SO4 triamminetrichlorochromium(III) [ Cr(NH3)3Cl3] chloro(ethylene)dihydridobis(triphenylphosphinerhodium(III) tetraaquadichloromolybdate(III) chloride [Rh(PPh3)2(C2H2)ClH2] [Mo(H2O)4Cl2] Cl tetraaquadichloromolybdate(III) ion [Mo(H2O)4Cl2]+ hexaamminechromium(III) hexachloroiridate(III) [Cr(NH3)6 ][IrCl6] [Cr(H2O)2 BrClFI] - diaquabromochlorofluoroiodochromium(III) ion tetraammineaquafluorocobalt(III) ion [Co(NH3)4(H2O)F] 2+ bis(ethylenediammine)cuprate(II) ion [Cu(en)2] 2+ bis(ethylenediammine)cuprate(II) tetrachloroplatinate(II) [Cu(en)2][PtCl4] QUIZ 1. Write the nomenclature for the formula: Br [Sr(py)5Br2] dibromopentapyridinestrontium(II) py [Be(OH)4]2tetrahydroxoberylium(II) ion py py Sr py py Br 2. Find the molecular formula for the following compounds: hexaaquamagnesium(II) perchlorate [Mg(H2O)6] ClO4 Fe trisacetylacetonatoferrate(III) [Fe(acac)3] tetracarbonylruthenium(II) ion [Ru(CO)4]2O O O O O O 6 3. Write the nomenclature for the formula: [Rh(PPh3)3Cl] chlorotris(triphenylphosphine)rhodium(I) [Cr(H2O)5Cl]2+ pentaaquachlorochromium(III) ion 4. Find the molecular formula for the following compounds: tetraamminedichlorocobalt{(III) ion [Co(NH3)4Cl2]+ tetraammineargentate(I) ion [Ag(NH3)4]+ hexaaquaferrate(III) ion [Fe(H2O)6]3+ Reactions of coordination compounds How can we prepare coordination compounds or convert them into other compounds? The answer is by a Redox reaction, Two possible mechanisms: Outer sphere: coordination sphere remain intact. Inner sphere: ligands transfer between coordination spheres. OUTER SPHERE [Fe(CN)6]4- + [ IrCl6]2- → [Fe(CN)6]3- + [ IrCl6]3The coordination spheres stays the same around each metal; reaction involves only transfer of electrons . 53 In a self-exchange reaction, the left-hand and right-hand sides of the equation are identical; only electron transfer, and no net chemical reaction, takes place. 7 [Co(Phen)3]2+ + [Co(Phen)3]3+ → [Co(Phen)3]3+ + [Co(Phen)3]2+ For the net chemical reaction can be seen in: [Fe(CN)6]4- + [Fe(Phen)3]3+ → [Fe(CN)6]3- + [Fe(Phen)3]2+ When the reactants have different bond lengths, vibrationally excited states with equal bond length must be formed in order to allow electron transfer. overall reaction Co2+ Co3+ Co3+ Co2+ Electron transfer (Co2+)* (Co3+)* (Co3+)* (Co2+)* Inner sphere [Co(NH3)5Cl]2+ + [Cr(H2O)6]2+ + 5H2O → [Co(H2O)6]2+ + [Cr(H2O)5Cl]2+ + 5NH3 Cl- ligand been transferred from Co to Cr [Co(NH3)5CN]2+ + [Cr(H2O)6]2+ + 5H2O fast → [Cr(H2O)5NC]2+ in 30seconds → [Co(H2O)6]2+ + [Cr(H2O)5NC]2+ + 5NH3 [Cr(H2O)5CN]2+ 8 56 Chelate Monodentate: attached ligand to only one metal. polydentate: attached at two or more separated metals. Examples: ethylenediamine (en) NH2CH2CH2NH2 attached by its two nitrogen atoms. Ethylenediaminetetraacetic acid, EDTA upto six positions. (HOOCCH3)2NCH2CH2N(CH3COOH)2 attached to 9 2- Chelating Ligands O C O O H2C acetate ion carbonyl O CH2 H2N O O O N O2C NH2 M O2C O O N O2C acetyleacetanato, acac O2C M ethylenediammine, en N ethylenediamminetetraacetate, EDTA O N oxalate, ox C2O42- M M N O O O Na+ O N O N bipyridine (bipy) N M O O phenanthroline, phen Na+ [18-crown-6] Chelate effect Chelating ligands give much larger values of formation constant, kf [Ni(H2O)6]2+ + 6NH3 ↔ [Ni(NH3)6]2+ + 6H2O [Ni(H2O)6]2+ + 3 en ↔ [Ni(en)3]2+ + 6H2O kf=4x108 kf=2x1018 sequestering agents are chelating agents that used to remove unwanted metals. in medicine, sequestering agents are used to selectively remove toxic metal ions e.g. Hg2+ and Pb2+ while leaving biologically important metals Chelating Ligands One of an important chelating agent is ethylenediamminetetraacetate, (EDTA) 4EDTA is used to Tie up Ca2+ in bathroom cleaners, shower sprays prevent blood clots remove heavy metals from the body when poisoned solubilize iron in plant fertilizer remove iron taste from mayonnaise (arising from its preparation in iron vats) 10 METAL CHELATE IN LIVING SYSTEMS CH2 Chlorophyll is the green part of plants involved in photosynthesis. it is a magnesium(II) complex ion. CH3 H CH CH2CH3 H3C N N Mg HC CH N N H CH3 H3C H H2C H CH3 O COOCH3 63 METAL CHELATE IN LIVING SYSTEMS The haem unit in haemolglobin of our blood involves a rigid chelating ligand. H2O, O2 or CO can be the sixth coordination ligand. 63 11