Supplementary Information Table 1. Univariate study of risk factors for EFS Patients Events Patient age ≤ 8.5 years / > 8.5 years 0.992 41 / 40 15 / 15 Patient gender Male / Female 0.674 51 / 30 20 / 10 Risk status1 Standard / High 0.016 51 / 30 14 / 16 HLA match (8/8)2 Match / Mismatch 0.339 57 / 24 19 / 11 Conditioning regimen TBI based / Non-TBI based 0.191 27 / 54 13 / 17 GVHD prophylaxis3 CS + MTX (4) / CS + MTX (0-3) 0.739 53 / 28 19 / 11 Donor-recipient gender Female to Male / Others 0.029 13 / 68 9 / 21 CD34+ dose 0.008 Lower (≤ 10.0 x 106/kg) 40 21 Higher (> 10.0 x 106/kg) 41 9 CD3+ dose 1 P value 0.458 Lower (≤ 60.0 x 107/kg) 37 16 Higher (> 60.0 x 107/kg) 44 14 Standard risk patients included acute leukemia in first CR, chronic myeloid leukemia in first chronic phase, and refractory anemia. High risk patients included acute leukemia in second CR or greater, or without complete remission, myelodysplastic syndrome with excess of blasts, juvenile myelomonocytic leukemia, and secondary leukemia. 2 3 HLA match at HLA-A, B, C, DRB1 alleles Cyclosporine and all 4 doses of mini-methotrexate vs. cyclosporine and 3 or fewer doses Abbreviations: TBI, total body irradiation; CS, cyclosporine; MTX, methotrexate. Table 2. Univariate study of risk factors for overall chronic GVHD Patients Events Patient age ≤ 8.5 years / > 8.5 years 0.449 41 / 40 13 / 16 Patient gender Male / Female 0.196 51 / 30 16 / 13 Risk status1 Standard / High 0.178 51 / 30 21 / 8 HLA match (8/8)2 Match / Mismatch 0.454 57 / 24 19 / 10 Conditioning regimen TBI based / Non-TBI based 0.064 27 / 54 6 / 23 GVHD prophylaxis3 CS + MTX (4) / CS + MTX (0-3) 0.669 53 / 28 18 / 11 Donor-recipient gender Female to Male / Others 0.554 13 / 68 6 / 23 Previous acute GVHD No / Yes 0.232 39 / 42 11 / 18 CD34+ dose 0.519 Lower (≤ 10.0 x 106/kg) 40 13 Higher (> 10.0 x 106/kg) 41 16 CD3+ dose 1 P value 0.255 Lower (≤ 60.0 x 107/kg) 37 11 Higher (> 60.0 x 107/kg) 44 18 Standard risk patients included acute leukemia in first CR, chronic myeloid leukemia in first chronic phase, and refractory anemia. High risk patients included acute leukemia in second CR or greater, or without complete remission, myelodysplastic syndrome with excess of blasts, juvenile myelomonocytic leukemia, and secondary leukemia. 2 3 HLA match at HLA-A, B, C, DRB1 alleles Cyclosporine and all 4 doses of mini-methotrexate vs. cyclosporine and 3 or fewer doses Abbreviations: TBI, total body irradiation; CS, cyclosporine; MTX, methotrexate Table 3. Univariate study of risk factors for extensive chronic GVHD Patients Events Patient age ≤ 8.5 years / > 8.5 years 0.332 41 / 40 8 / 12 Patient gender Male / Female 0.122 51 / 30 10 / 10 Risk status1 Standard / High 0.205 51 / 30 15 / 5 HLA match (8/8)2 Match / Mismatch 0.239 57 / 24 12 / 8 Conditioning regimen TBI based / Non-TBI based 0.130 27 / 54 4 / 16 GVHD prophylaxis3 CS + MTX (4) / CS + MTX (0-3) 0.947 53 / 28 13 / 7 Donor-recipient gender Female to Male / Others 0.755 13 / 68 4 / 16 Previous acute GVHD No / Yes 0.803 39 / 42 9 / 11 CD34+ dose 0.356 Lower (≤ 10.0 x 106/kg) 40 12 Higher (> 10.0 x 106/kg) 41 8 CD3+ dose 1 P value 0.860 Lower (≤ 60.0 x 107/kg) 37 9 Higher (> 60.0 x 107/kg) 44 11 Standard risk patients included acute leukemia in first CR, chronic myeloid leukemia in first chronic phase, and refractory anemia. High risk patients included acute leukemia in second CR or greater, or without complete remission, myelodysplastic syndrome with excess of blasts, juvenile myelomonocytic leukemia, and secondary leukemia. 2 3 HLA match at HLA-A, B, C, DRB1 alleles Cyclosporine and all 4 doses of mini-methotrexate vs. cyclosporine and 3 or fewer doses Abbreviations: TBI, total body irradiation; CS, cyclosporine; MTX, methotrexate Table 4. Rates of acute and chronic GVHD for the younger subcohort, analyzed according to the median CD34+ and CD3+ cell dose for the subcohort. Patient Median age ≤ 8.5 CD34+ years dose/kg CD3+ dose/kg N Acute GVHD II-IV Overall Chronic GVHD Extensive Chronic GVHD Rate % P value Rate % P value Rate % P value 0.818 26.3±10.5 0.461 21.1±9.7 0.896 ≤ 15 x 106 19 52.6±11.9 > 15 x 106 22 45.5±11.0 ≤ 110 x 107 19 47.4±11.9 > 110 x 107 22 50.0±11.0 36.4±10.6 0.665 31.6±11.1 31.8±10.3 18.2±8.4 0.937 21.1±9.7 18.2±8.5 0.880