CHAPTER 8: HOW CELLS HARVEST ENERGY WHERE DOES IT ALL FIT IN? Chapter 8 builds upon the cell anatomy coverage of Chapter 4 and information about cellular energy in Chapter 8. It provides students with details of cellular metabolism using cell respiration as a model pathway. All of the principles covered in Chapters 2 through 7 culminated in this chapter and should be gently reviewed as concepts in this chapter are covered. The information in Chapter 8 is crucial for students to understand other concepts that integrate cell function to homeostasis and development. SYNOPSIS Biological endergonic reactions do not occur spontaneously and are generally coupled with reactions that split energy-carrying molecules like ATP. ATP is not a long-term energy storage molecule, it is made only when needed. It is an extremely valuable molecule because it is used to do most of the work in a cell and is used to drive endergonic reactions. Cells generate ATP through two different processes, substrate level phosphorylation and chemiosmosis. The substrate level phosphorylation produces ATP from ADP and phosphate by association with an exergonic reaction and is the more ancient process. Chemiosmosis occurs when protons pumped out through specific transmembrane channels re-enter through other channels coupled to ATP synthesis. Most biological ATP is produced in this manner. Glycolysis occurs in the cytoplasm of a cell and is catalyzed by enzymes not associated with any membranes or organelles. Glucose is converted to two glyceraldehyde-3-phosphate (G3P) molecules in a reaction that costs two ATP molecules. G3P is then converted to pyruvate and produces four ATPs via substrate level phosphorylation, a process that occurs with or without oxygen. In addition, a pair of electrons and one proton are removed from G3P reducing the coenzyme NAD+ to NADH. The net energy yield at this point is two ATPs per glucose. Glycolysis continues as long as there is a fresh supply of glucose and there is sufficient NAD+. It is advantageous for a cell to do something with its NADH other than allowing it to build up because its supply of NAD+ is generally limited. NADH returns to NAD+ through aerobic respiration. The process of aerobic respiration includes the oxidation of pyruvate to acetyl-CoA and the Krebs cycle. Pyruvate is oxidized to a two-carbon molecule, acetyl-CoA, one NAD+ is reduced to NADH and one molecule of CO2 is given off. This reaction occurs within the mitochondria of eukaryotes or on special membranes in a few bacteria. The Krebs cycle is a complex set of reactions in which a four-carbon molecule is added to the acetyl-CoA from pyruvate oxidation. During the cycle, two molecules of CO2 are given off and three NADH, one FADH2, and one ATP are produced. These quantities are, of course, for a single molecule of pyruvate. The degradation of a whole molecule of glucose produces twice the quantity of each substance. Oxidative respiration in itself produces no more ATP than glycolysis, but it becomes highly efficient only when it is coupled to the fourth stage, the chemiosmotic generation of ATP via an electron transport chain. This process occurs on the inner mitochondrial membrane, requires 66 oxygen as a final electron acceptor, and therefore occurs only in aerobic organisms. In theory, each NADH from the oxidative respiration (a total of eight per glucose) activates three pumps and produces three ATPs (a total of 24). Each FADH2 from the Krebs cycle (two per glucose) activates two pumps and generates two ATPs (a total of four). The cell uses one ATP to get the NADH from glycolysis (a total of two) into the mitochondrion, thus the net value of each is only two ATPs (a total of four). Overall, glycolysis plus complete oxidative respiration produces 32 ATPs via chemiosmosis and four ATPs by substrate level phosphorylation. In actuality, the mitochondrial membrane is leaky, and only 2.5 ATPs are produced per NADH and 1.5 per FADH2. Thus, on average, closer to 30 ATP are produced by chemiosmosis in the electron transport chain. Proteins and fats are also metabolized. Proteins provide the same efficiency as glucose as constituent amino acids are converted to participants in the Krebs cycle. Fats are metabolized via b-oxidation during which two carbon chunks are converted to acetyl-CoA, NADH, and FADH2 molecules. A six carbon fatty acid molecule produces 36 actual ATP compared to 30 actual from a six carbon sugar. The NADH produced in glycolysis also returns to NAD+ through various anaerobic fermentations. A carbohydrate serves as the final electron acceptor in most fermentations. Products of familiar eukaryotic fermentations include ethyl alcohol and carbon dioxide by yeast and lactic acid by overworked muscle cells. The stages of cellular respiration have evolved over time through 6 major events, each building on what had come before. LEARNING OUTCOMES Understand the value of ATP in biological metabolic reactions. Describe two ways in which cells generate ATP and indicate which is a more efficient process. Know the location of glycolysis in a generalized eukaryotic cell. Understand the differences in the glycolytic reaction under anaerobic and aerobic conditions. Describe glycolysis in general terms, including the molecules that exist at its start and its end, as well as its net versus total ATP production. Understand the mechanisms that recycle postglycolytic NADH molecules under anaerobic and aerobic conditions. Explain why the electron-carrier molecule produced in glycolysis and the two kinds of molecules produced in the Krebs cycle differ from one other in the number of ATP each generates. Compare the overall energy efficiency of the complete aerobic degradation of one molecule of glucose with the efficiency of the glycolytic process alone. Understand how proteins and fats are metabolized. Compare the number of ATPs produced in the degradation of carbohydrates, proteins, and fats. Describe alcoholic fermentation in terms of electron acceptors, ATP yield, and end products. Explain the process of anaerobic respiration as it occurs in human muscle. Describe the 6 major innovations that highlight the evolution of metabolism. 67 COMMON STUDENT MISCONCEPTIONS There is ample evidence in the educational literature that student misconceptions of information will inhibit the learning of concepts related to the misinformation. The following concepts covered in Chapter 8 are commonly the subject of student misconceptions. This information on “bioliteracy” was collected from faculty and the science education literature. Students believe respiration is the same as breathing Students believe food is anything that goes into the organism including minerals, water, carbon dioxide Carbon dioxide is formed from oxygen during cellular respiration Water is not a product of cellular respiration Oxygen burns the food molecules during cellular respiration Glycolysis is the same as fermentation Cellular respiration always breaks down glucose completely and always makes 36 ATP per molecule All of the energy produced by mitochondria is converted to ATP The Krebs cycle takes place in the cytoplasm Each glucose molecule undergoes one Krebs Cycle and ETC event ATP gives energy to a cell ATP is produced in the body and not in the cell Only carbohydrates are involved in ATP production Glucose is the only molecule that fuels ATP ATP production increases with calories taken in the diet Lipids are solely consumed during weight loss Enzymes are so highly selective that they only bind to one type of substrate Enzymes cannot bind to products of their reaction Dietary calories (kilocalories) are the same as the standard calorie unit INSTRUCTIONAL STRATEGY PRESENTATION ASSISTANCE Another analogy to help explain the value of controlled pathways is jumping off a skyscraper. Without controlled pathways, i.e., stairs, you go splat! With a controlled pathway, you may be a little out of breath and have tired legs, but you get down in one piece. Even if you stumble or fall down a few, at least you are not dead! Also, unless you are Superman, you’re not going to be able to leap tall buildings in a single bound and do the pathway in reverse. It is possible, albeit exhausting, to climb the stairs. There must be a clear differentiation between the generation of ATP via substrate-level phosphorylation and chemiosmosis. The former occurs directly in the cytoplasm. The latter requires a membrane bound proton pump. In eukaryotes, chemiosmosis is associated with the mitochondria, the electron transport chain and oxygen as the final electron acceptor. If any of these are not present, NADH will not be converted to ATP. It is important to stress where each 68 of the stages of cellular respiration occur, how ATP from each is generated, and whether it relies on NAD+ or FAD+ as electron carriers. Figures 9.7 and 9.12 are especially valuable in presenting “the big picture.” Remind students that the products of the Krebs cycle must be doubled for each molecule of glucose degraded. However, the products of glycolysis are not doubled. Also remind them to be careful in converting NADH to ATP. Those produced in the cytoplasm (through glycolysis) are worth only 2 theoretical (or 1.5 actual) ATP, those produced in the mitochondria are worth 3 theoretical (or 2.5 actual) ATPs. You may find it valuable to color-code or specially label the energy products of each stage as you go through. Instruct the students to do the same in their class notes. HIGHER LEVEL ASSESSMENT Higher level assessment measures a student’s ability to use terms and concepts learned from the lecture and the textbook. A complete understanding of biology content provides students with the tools to synthesize new hypotheses and knowledge using the facts they have learned. The following table provides examples of assessing a student’s ability to apply, analyze, synthesize, and evaluate information from Chapter 8. Application Analysis Synthesis Have students explain why a person does not need carbohydrates as a source of ATP. Have students describe a possible mechanism for the observation that high levels of carbon dioxide cause yeast to switch from aerobic to anaerobic respiration. Ask students explain why long-term high protein diets can result in kidney damage. Ask students to explain the activity of the glycolysis in organisms that obtain energy from diets consisting of lipids and proteins. Ask students to explain the activities of cellular respiration if oxygen uptake is block by carbon monoxide poisoning. Ask students to hypothesize why it is normal for ATP to inhibit the Krebs cycle. Ask students predict the commercial applications of a technique that causes mitochondria to transport electrons to a metal ion instead of oxygen. Have students explain agricultural researchers have evidence that almost all of the metabolic rate of offspring comes from the female parent. Ask students to explain the changes in how cellular respiration operates in 69 diabetics who are not able to shuttle glucose rapidly into cells. Evaluation Ask students to evaluate the benefits an athlete may derive by resting and eating lots of carbohydrates a day before a high performance athletic event. Ask students to refute the claim that consuming sports drinks containing phosphorus increases the body’s ability to produce ATP. Have the students evaluate the claim the diets high in fructose are just as effective at providing energy for the body as high glucose diets. VISUAL RESOURCES Prepare bunches of colored cards, a different color to represent ADP, ATP, NAD+, NADH, FAD+, and FADH2. This currency can be distributed as you present each stage of cellular respiration. For example, a bacteria cell ready for fermentation starts with two ATPs and two NAD+. Take the two ATPs to start glycolysis. Then take the two NAD+ and give out two NADH and four ATPs. When you try to run through glycolysis again, there are no NAD+. After alcoholic fermentation occurs, trade the two NADH for two NAD+ and do another glycolysis reaction. Aerobic respiration can be done in a similar manner. IN-CLASS CONCEPTUAL DEMONSTRATIONS Name That Molecule Game Introduction A mock game show is a fun and effective way to review the pathways of cellular respiration. Encourage the students to come up with questions that would test the knowledge of their classmates Materials Large index cards Thick black marker Student volunteers Procedure & Inquiry 1. Label the index cards to represent one concept of cellular respiration. Possible labels are: a. Glucose b. Fructose-6-phosphate c. ATP synthase d. Mitochondrial inner membrane 70 2. 3. 4. 5. 6. 7. e. Pyruvate Announce to the class that a student will be called down to class to receive an index card containing the name of a molecule or structure associated with cellular respiration. The label cannot be seen by the class. Then tell the class that they have to figure out the molecule or structure based on a statement of fact made by the student holding the card. Ask a student to come down to the room and hand them a labeled index card so that the card is not facing the class Tell the student that they must give the class some fact about the molecule or structure without giving away its name. The class must guess the answer based on the student’s facts. Inaccurate hints should be brought up and corrected by other students. A correct answer results in another student coming down to pick up a different labeled card. USEFUL INTERNET RESOURCES 1. Case studies are excellent for reinforcing scientific concepts. The University of Buffalo produced a study using anemia as a way of understanding the signs of metabolic disease. This case study can be done in class or be given as a take-home. The case study can be found at http://www.sciencecases.org/ida/ida.asp. 2. Students need to be reminded that the mitochondria, which are responsible for much of the metabolism covered in this chapter, are “little creatures” living within the cell. A case study called “Little Mito”, produced for the University of Buffalo gives a humor account of the origins of mitochondria. The website is at http://www.sciencecases.org/mito/mito.asp. 3. Animations are effective ways of reinforcing lecture content. Virtual Cell Animation Collection, by North Dakota State University has a collection of animations that model cellular metabolism. The website can be found at: http://vcell.ndsu.nodak.edu/animations/. 4. Cellular metabolism can be an overwhelming topic for students. Many students perceive that the processes of cell respiration alone are very complex processes. However, cell respiration is only on small component of all the metabolic pathways taking place in a cell. Main Metabolic Pathways for Internet displays a flowchart of the major metabolic pathways eukaryotic animal cells. The chart can be found at http://home.wxs.nl/~pvsanten/mmp/mmp.html. LABORATORY IDEAS A. Specificity of Glycolysis Have students perform a simple experiment in which students investigate the ability of yeast to metabolize different sugars and sweeteners. a. Tell the class that they will be using yeast as a model for measuring the ability for various sugars and sweeteners to be used in glycolysis. b. Students should be able to make a setup that that evaluates metabolic waste 71 c. d. e. f. production. They can come up with a way to detect carbon dioxide by looking at bubbles forming in solution or by measuring the drop of pH in the solution due to the buildup of carbonic acid. Provide students with the following materials: i. Fast rising baker’s yeast ii. Test tube rack iii. 6 test tubes iv. pH paper v. Distilled water (negative control) vi. 0.5% d-glucose solution (positive control) vii. 0.5% l-glucose solution viii. 0.5% fructose solution ix. 0.5% saccharine solution x. 0.5% Splenda solution Instruct the students to design an experiment to test if yeast are able to metabolism particular sugars or sweeteners. Tell them that they must first determine which sugar in the samples provided will be the positive control and how they should compare it to a negative or “no results” control. Have the students explain why a particular sugar or sweetener worked or did not work as a source of material for cellular respiration. LABORATORY IDEAS Effect of Temperature on Cellular Respiration Have students perform a simple experiment in which students investigate the relationship between temperature and rate of cellular respiration. a. Tell the class that they will be using yeast as a model investigating the relationship between temperature and cellular respiration. b. Students should be able to make a setup that that evaluates carbon dioxide as an indicator of cellular respiration. They can come up with a way to detect carbon dioxide by looking at bubbles forming in solution or by measuring the drop of pH in the solution due to the buildup of carbonic acid. c. Provide students with the following materials: i. Fast rising baker’s yeast ii. 0.5% glucose solution iii. Test tube rack iv. Test tubes v. Thermometer vi. pH paper vii. Hot plate viii. Ice bath g. Instruct the students to design an experiment to test the relationship between temperature and cellular respiration. h. Tell them that they must first determine what would be an appropriate temperature range to test. 72 i. Ask the students to see if their estimates match the literature about the rate of change of enzymatic reaction in relationship to temperature. LEARNING THROUGH SERVICE Service learning is a strategy of teaching, learning and reflective assessment that merges the academic curriculum with meaningful community service. As a teaching methodology, it falls under the category of experiential education. It is a way students can carry out volunteer projects in the community for public agencies, nonprofit agencies, civic groups, charitable organizations, and governmental organizations. It encourages critical thinking and reinforces many of the concepts learned in a course. Students who have successfully mastered the content of Chapter 8 can apply their knowledge for service learning activities in the following ways: 1. Have students talk to youth sports groups about the risks of high-protein diets. 2. Have students design prepare an electronic presentation for school teachers about the pathways of cellular respiration. 3. Have students tutor middle school or high school biology students studying cell metabolism. 4. Have students give demonstrations to boy scouts or girl scouts using yeast a model for understanding commercial applications of cellular respiration. This project is funded by a grant awarded under the President’s Community Based Job Training Grant as implemented by the U.S. Department of Labor’s Employment and Training Administration (CB-15-162-06-60). 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