1 Population Genetics: The Hardy-Weinberg Rule Background This tasty activity for biology students demonstrates the effects of selective predation on a small population. Predators (students) selectively prey upon (eat) fish (Goldfish® crackers) in a small population. Prey are replaced with fish randomly selected from an ocean (a mixing bowl full of Goldfish® crackers) to create the next generation. Students calculate genotype frequencies for each generation using the Hardy-Weinberg rule. They then examine their data to see if the genotype frequencies have shifted as a result of selective predation. Students work in lab groups of 3 to 4. As an option, you can have the lab groups pool their results and calculate genotype frequencies for the aggregate data. To review, the Hardy-Weinberg rule for a population at genetic equilibrium assumes the following: 1. No genetic mutation is occurring within the population. 2. The breeding population is large. 3. The population is isolated from other populations of the species. No differential migration occurs. 4. All members of the population survive and reproduce. There is no natural selection. 5. Mating is random within the population. Genotype frequencies for a population in Hardy-Weinberg equilibrium p2 + 2 pq + q2 = 1, where p2 is the Homozygous dominant frequency in the population, and q2 is the homozygous recessive frequency in the population p+q=1 example: if one out of every 100 people are homozygous recessive for beak shaped nose then q2 = 1/100 = .01 Then q = square root of (.01) = .1 and p = 1-.1 = .9 Then p2 = .9 * .9 = .81 and x people will be homozygous dominant for not having a beak shaped nose. That means that 100 – 81 -1 = 18 people out of every 100 are carriers for the beak shaped nose. Note: This activity involves eating. Do not conduct the activity in a laboratory where chemicals or other agents can contaminate the crackers. Make sure students wash their hands before eating any crackers. Materials A printed copy of the activity A large mixing bowl A package of cheese-flavored Pepperidge Farm Goldfish® crackers A package of pretzel-flavored Pepperidge Farm Goldfish® crackers 2 Procedure 1. Empty both packages of Goldfish® crackers into the bowl and mix thoroughly. 2. Take a random population of 10 fish (crackers) from the ocean (mixing bowl). 3. Record on your chart under "Generation 1" the number of gold fish and brown fish in the random population. You can calculate frequencies later. Gold fish (cheese-flavored Goldfish®) express the recessive allele (f) and brown fish (pretzel-flavored Goldfish®) express the dominant allele (F). Gold are ff brown are either Ff or FF 4. Choose 3 gold fish from the first generation and eat them; if you do not have 3 gold fish, fill in the missing number by eating brown fish. 5. Choose at random 3 fish from the ocean—one fish for each one that died (was consumed by you) and add them to your population. Do not use artificial selection. 6. Record on your chart under "Generation 2" the number of gold fish and brown fish. 7. Choose 3 gold fish from the second generation and eat them; if you do not have 3 gold fish, fill in the missing number by eating brown fish. 8. Choose at random 3 fish from the ocean and add them to your population. Do not use artificial selection. 9. Record on your chart under "Generation 3" the number of gold fish and brown fish. 10. Choose 3 gold fish from the third generation and eat them; if you do not have 3 gold fish, fill in the missing number by eating brown fish. 11. Choose at random 3 fish from the ocean and add them to your population. Do not use artificial selection. 12. Record on your chart under "Generation 4" the number of gold fish and brown fish. 13. Choose 3 gold fish from the fourth generation and eat them; if you do not have 3 gold fish, fill in the missing number by eating brown fish. 14. Choose at random 3 fish from the ocean and add them to your population. Do not use artificial selection. 15. Record on your chart under "Generation 5" the number of gold fish and brown fish. 16. Calculate the allele and genotype frequencies for each generation using the data in Chart 1. 17 (Optional) Calculate the sum of the gold and brown fish counts of each generation for all the lab groups, record them in Chart 2, and then calculate the allele and genotype frequencies of the aggregate data for each generation. Hints for calculating genotype frequencies (example 2) If you know from counting that 16% of the fish in a population express the homozygous recessive allele (ff), then the q2 value is 0.16, and q equals the square root of 0.16 =(0.4). Thus, the frequency of the f allele is 0.4 or 40%. Since the sum of the F and f alleles must be 1, the frequency of the F allele must be 0.6 or 60%. Using Hardy-Weinberg, you can assume that in the population there are 0.36 FF (0.6 x 0.6), 0.48 Ff (2 x 0.4 x 0.6), and 0.16 ff. Remember: p2 + 2 pq + q2 = 1 and p+q=1 3 Conclusion The Hardy-Weinberg rule is an important tool for detecting changes in the genotype frequencies of a population. Applying the Hardy-Weinberg rule to the data shows that selective predation of the gold fish results in the reduction of the ff allele’s frequency in subsequent generations. It is important to recognize that gold fish and the ff allele will not totally disappear from the population. Although individuals expressing the ff allele may die, because of selective predation, before they reproduce, surviving individuals that do not express the ff allele still carry it. If the pressure of selective predation is removed, individuals expressing the ff allele survive, reproduce, and the population expressing the ff allele increases, as does the frequency of the ff allele. Charts for Population Genetics: The Hardy-Weinberg Rule Generation Gold (ff) Brown (Fx) Chart 1 (Lab group data) q2= q= freq. of homozygous gold gene recessive in (gold) population p2= freq of homozygous Dominant FF 2pq= freq of heterozygous Ff 1 2 3 4 5 Gold fish represent homozygous (ff) recessive fish: q2 = number of ff fish / total number of fish (In our lab total number =10) p2 = percent of fish who are homozygous FF dominant brown. Since they look the same as heterozygous Ff brown fish we have to calculate a predicted number who are FF. First calculate q = √q2 Then calculate p from p+q = 1 p=1–q Now you can calculate the frequency or percent of FF fish by: p2 = p * p The percent of fish that are heterozygous i.e. have both genes Ff, is: 2pq = 2 * p * q Chart 2 (Aggregate data for all lab groups) Total N= Gold Brown Generation q2 q p P2 (f) (F) 1 2 3 4 5 AVERAGE No. of Fish Gold= FF Fish 2pq How many of our aggregate population are heterozyogous?_________________