Sekiguchi 1 SUPPLEMENTAL METHODS 2 Nerve-crush injury 3 Nerve-crush injury was induced as described previously.1 Briefly, mice were anesthetized via 4 isoflurane inhalation, then the sciatic nerve was exposed at mid-thigh level and crushed for 15 5 seconds with a hemostat; the incision was closed, and mice were kept on a heating plate at 37°C 6 until fully recovered from the anesthesia. Analgesia was provided with intraperitoneal injections 7 of buprenorphine immediately after surgery and with orally administered meloxicam solution for 8 up to 3 days after surgery. 9 10 Motor-nerve conduction velocity (MCV) 11 Measurements were performed in sedated mice at the level of the sciatic-peroneal nerves by 12 using standard orthodromic surface recording techniques and a TECA TD-10 portable recording 13 system (Oxford Instruments, Pleasantville, NY, USA). Electrodes were inserted at the sciatic 14 notch and the Achilles tendon, and electromyograms were recorded in the interosseus muscles of 15 the foot. Compound muscle action potentials (CMAPs) were monitored by stimulating the 16 peroneal nerve at the posterolateral ankle or by stimulating the sciatic nerve percutaneously with 17 a monopolar needle electrode; the latency difference between the peaks of the CMAPs evoked by 18 stimulation at the two sites was determined, then MCV was calculated by dividing the distance 19 between the stimulating electrodes by the average difference in latency. To correct for potential 20 differences in ambient light, temperature, body temperature, sedation, and other confounding 1 Sekiguchi 1 factors, measurements in the injured limb were normalized to measurements performed in the 2 uninjured, contralateral limb. 3 4 Duration of rotarod exercise 5 In the rotarod test,2 mice were placed on the rotarod cylinder, the rotational speed was increased 6 from 4 rpm to 40 rpm over 10 minutes, and the duration of exercise (i.e., the length of time until 7 the animal fell off the cylinder or gripped the cylinder and spun for two revolutions) was 8 recorded; the maximum of 3 measurements was reported for each mouse. Mice were trained 6 9 times over a two week period before experimental data was acquired. 10 11 qRT-PCR 12 RNA was extracted from homogenized nerve tissue or from 5×105 cells with RNA STAT-60 13 (TEL-TEST, Inc., Friendswood, TX, USA) as directed by the manufacturer’s instructions. Total 14 RNA was reverse transcribed with a Taqman cDNA Synthesis Kit (Applied Biosystems, Foster 15 City, CA, USA) and amplified with the SDS 7500 FAST Real-time PCR system (Applied 16 Biosystems); primer and probe sequences are provided in Supplemental Table. The PCR 17 procedure consisted of a 2-minute hold at 50°C, and then a 10-minute hold at 95°C followed by 18 40 2-step cycles between 95°C for 15 seconds and 60°C for 60 seconds. Relative mRNA 19 expression was calculated with the comparative CT method (relative expression=2ΔCT) and 20 normalized to the expression of the endogenous 18S gene. 21 2 Sekiguchi 1 Gli-luciferase assay 2 HUVECs were transfected with Renilla luciferase (pRL-TK, Promega Corporation, Madison, 3 WI, USA) and with a Gli-luciferase reporter construct by using Fugene6 (F. Hoffmann-La Roche 4 Ltd, Basel, Switzerland) as previously described3 and cultured for 24 hours; then, the medium 5 was replaced with low-serum medium (0.5% FBS/EBM or FBS/DMEM), and the cells were 6 cultured for another 8 hours. Cells were treated with E2 (7×10-8M) for 6 hours and with or 7 without 1 µg/mL Shh for 18 hours; then, luciferase activity was assayed with a luciferase-assay 8 system (Promega Corporation), and normalized to the Renilla luciferase control to compensate 9 for differences in transfection efficiency. 10 3 Sekiguchi 1 SUPPLEMENTAL REFERENCES 2 1. De Koning P, Brakkee JH, Gispen WH. Methods for producing a reproducible crush in 3 the sciatic and tibial nerve of the rat and rapid and precise testing of return of sensory 4 function. Beneficial effects of melanocortins. J Neurol Sci 1986;74:237-246. 5 2. Jeong SW, Chu K, Jung KH, et al. Human neural stem cell transplantation promotes 6 functional recovery in rats with experimental intracerebral hemorrhage. Stroke 7 2003;34:2258-2263. 8 9 3. Pola R, Ling LE, Aprahamian TR, et al. Postnatal recapitulation of embryonic hedgehog pathway in response to skeletal muscle ischemia. Circulation 2003;108:479-485. 10 11 12 4 Sekiguchi 1 Supplemental Table. Primers and probes used for real-time qRT-PCR analyses. Forward (F)/Reverse(R) primer Probe F: 5’-CGGGTCGGGAGTGGGT-3’ 5’- Cal Fluor R: 5’-GAAACGGCTACCACATCCAAG-3’ Orange-TTTGCGCGCCTGCTGCCTT-BHQ-3’ 18S F: 5’-CAGCGACTTCCTCACCTTCCT-3’ 5’- Fam-ACCGCGACGAAGGCGCCA-BHQ-3’ Shh R: 5’-AGCGTCTCGATCACGTAGAAGAC-3’ F: 5’- GCTTGGATGAAGGACCTTGTG-3’ 5’- Fam-ACTCTCCACGCTTCGCCGCCT-BHQ-3’ Gli1 R: 5’- GCTGATCCAGCCTAAGGTTCTC-3 F: 5’-TGTGGTCATCCTGATTGCATCT-3’ 5’- R: 5’-GTCCCCAATGGCTGTCAGA-3’ Fam-ACCGTCCACGTGGCTTTGGCCT-BHQ-3’ Ptch1 F: 5’- GCAGGCTGCTGTAACGATGA-3’ 5’-FAM-CCCTGGAGTGCGTGCCCACG-BHQ-3’ VEGFA R: 5’-GCATGATCTGCATGGTGATGTT-3’ F: 5’-GAATGCAGAGTCACAGTTCAACCT-3’ 5’-FAM-CCCAGCCACTGACCTCCGATTGC-BHQ R: 5’-GGTGTAGTAGCCGTTTCGACAGA-3’ -3’ HHIP 2 3 5 Sekiguchi 1 Supplemental Figure 1 2 3 Local E2 injection does not significantly increase serum E2 levels. One week before surgical 4 sciatic nerve-crush injury, E2 (100 μg) in poly lactide-CO glycoside (PLGA) (to ensure extended 5 E2 delivery) or PLGA alone (placebo) was locally injected into the designated injury site, or an 6 extended-release E2 pellet (0.5 mg delivered over 60 days) was subcutaneously implanted into 7 the limb. Serum E2 levels were evaluated 1-28 days after injury. 6 Sekiguchi 1 Supplemental Figure 2 2 3 E2 does not alter Ptch1 or Gli1 expression in cultured endothelial cells, fibroblasts, or Schwann 4 cells. (A) Ptch1 and (B) Gli1 mRNA expression was evaluated in HUVECs, fibroblasts (NIH 5 3T3), and Schwann cells (SW10) that had been treated with 1×10–8 mol/L E2 for 6 hours; 6 measurements were performed via qRT-PCR and normalized to endogenous 18S rRNA levels. 7 ND indicates not detectable. 8 7