Molecular Genetics of Non-syndromic Hearing Loss (1)

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Otology Seminar

Molecular Genetics of Non-syndromic Hearing Loss (1)

2002-7-3

R3 吳振吉

General Consideration

1.

1/1000: severe or profound deafness at birth or during early childhood (pre-lingual period)

60%-80% genetic

2.

1/1000: become deaf before adulthood

? % genetic

3.

30% pre-lingual deafness: syndromic

70% pre-lingual deafness: non-syndromic

4.

Non-syndromic pre-lingual hearing loss

DFNB: autosomal recessive – 85% -- 41 loci

DFNA: autosomal dominant – 15% -- 32 loci

DFN: X-linked – 1-3% -- 8 loci

5.

Causative genes:

Syndromic: ~ 100 genes

Non-syndromic: ~ 30 genes

Mapping and Isolation of Genes

1.

Obstacles to mapping: a.

extreme genetic heterogeneity b. absence of clinically distinctive signs for the various gene defects c.

tendency of deaf people to intermarry

2.

Segregation and linkage analysis with microsatellite polymorphic markers

3.

Candidate gene strategy:

- human cochlear cDNA library

- expressed sequence tags (ESTs): 200-400 bp partial cDNA sequences

4.

Mice models / zebrafish models

5.

In situ hybridization / immunofluorescence studies

Classification of Genes Underlying Isolated Deafness

1.

Hair cells

2.

Non-sensory cells

3.

Tectorial membrane

4.

Unknown

Deafness Caused by Nonsensory Cell Defects

A. Connexin 26 Defects: DFNB1, DFNA3

1.

Epidemiology a.

DFNB1 (13q12) 30-60% autosomal recessive deafness in Europe and US

20% autosomal recessive deafness in Japan b.

Kelsell et al (1997)

GJB2 (CX26) mutation in DFNA3 and DFNB1 families c.

Estvill et al. (1998)

49% familial cases

GJB2 mutation

37% sporadic cases

GJB2 mutation

2.

Connexin: a.

Connexin

connexon (hexamer)

gap junction:

- intercellular exchange of small diffusible molecules up to 1 kDa

- functional synchronization, growth and differentiation b.

16 members named based on MW (26-60 kDa) c.

GJα & GJβ d.

Heteromeric connexon

Heterotypic channel e.

Various combination

conductance of the channel and regulation mode

(voltage, phosphorylation, pH, Ca

2+

, cyclic nucleotides) f.

Expressed in the spiral ligament, stria vascularis and the supporting cells of the organ of Corti

transcellular circulation of K

+ g.

Connexin 32: Charcot-Marie-Tooth X-linked peripheral neuropathy

Connexin 43: visceroatrial heteroataxia

Connexin 46 and 50: cataract

3.

Connexin 26 ( CX26 or GJB2 ) a.

Connexin 26: 208 a.a. = 26 kDa b.

CX26 : 2 exons (First: 5’-UTR, Second: ORF + 3’-UTR) c.

DFNA3: M34T (?), W44C,

dominant negative mutation ( Xenopus oocyte) d.

DFNB1: 50 mutations i.

European-Mediterranean: 35delG (30delG) ii.

Ashkenazi Jews: 167delT iii.Japanese: 235delC e.

Mutational hot spot / founder effects f.

Selective advantage of CX26 mutation? g.

Pitfalls for genetic counseling: 1/3 cases- difficult interpretation

4.

Clinical features of DFNB1 a.

Severity of hearing loss: highly variable b.

Audiometry: flat or sloping c.

HRCT: no anomaly d.

2/3 cases: non-progressive

B. Connexin 31 Defects: DFNA2’

GJB3

C. Connexin 30 Defects: DFNA3’

1.

Connexin 26 & connexin 30: 77% identity in a.a.

DFNA3’

2.

del Castillo (2002)

GJB2 alleles in 422 subjects

44: only one alleles

Deletion: 342 kb

Δ ( GJB6 -D13S1830)

3.

Heterozygous for point mutation in GJB2 and Δ ( GJB6 -D13S1830)

4.

Digenic inheritance

D. Pendrin Defect: DFNB4 (and Pendred Syndrome)

1.

Pendred syndrome: a.

AR b.

Prepubertal onset thyroid goiter + congenital deafness c.

Euthyroidism or hypothyroidism d.

Abnormal perchlorate test e.

Enlarged vestibular aqueduct (EVA) and Mondini deformity

2.

PDS a.

7q31 b.

21 exons c.

Pds : strongly expressed in endolymphatic duct and sac (mouse embryo)

3.

Pendrin a.

780 a.a., 86 kDa b.

11 transmembrane domains c.

Chloride and iodide transporter d.

Inner ear fluid ionic homeostasis

abnormal water and salt flux

increased endolymphatic pressure

enlarged vestibular aqueduct (EVA) and Mondini deformity e.

Lack of endolymphatic hydrops

4.

Pendred syndrome causes continuous phenotype

E. Claudin-14 Defect: DFNB29

F. Cochlin Defect: DFNA9

G EYA4 Defect: DFNA10

H. POU3F4 Defect: DFN3

REFERENCES

1.

Petit C. Genes responsible for human hereditary deafness: symphony of a thousand. Nat. Genet.

1996;14:385-91.

2.

Steel KP. A new era in the genetics of deafness. N. Engl. J. Med.

1998;339:1545-7.

3.

Kalatzis V, Petit C. The fundamental and medical impacts of recent progress in research on hereditary hearing loss. Hum. Mol. Genet.

1998;7:1589-97.

4.

Steel KP, Kros CJ. A genetic approach to understanding auditory function. Nat.

Genet.

2001;27:143-9.

5.

Petit C, Levilliers J, Hardelin JP. Molecular genetics of hearing loss. Annu Rev

Genet.

2001;35:589-646.

6.

Mustapha M, Chouery E, Torchard-Pagnez D, et al. A novel locus for Usher syndrome type I, USH1G, maps to chromosome 17q24-25. Hum. Genet.

2002;110:348-50.

7.

Yasunaga S, Grati M, Cohen-Salmon M, et al. A mutation in OTOF, encoding otoferlin, a FER-1-like protein, causes DFNB9, a nonsyndromic form of deafness.

Nat. Genet . 1999;21:363-9.

8.

Skvorak AB, Weng Z, Yee AG, et al. Human cochlear expressed sequence tags provide insight into cochlear gene expression and identify candidate genes for deafness. Hum. Mol. Genet.

1999;8:439-52.

9.

Kelsell DP, Dunlop J, Stevens HP, et al. Connexin 26 mutations in hereditary non-syndromic sensorineural deafness. Nature 1997;387:80-3.

10.

Denoyelle F, Weil D, Maw MA, et al. Prelingual deafness: high prevalence of a

30delG mutation in the connexin 26 gene. Hum. Mol. Genet.

1997;6:2173-7.

11.

Denoyelle F, Lina-Granade G, Plauchu H, et al. Connexin 26 gene linked to a dominant deafness. Nature 1998;393:319-20.

12.

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2000;462:197-207.

13.

Estivill X, Fortina P, Surrey S, et al. Connexin-26 mutations in sporadic and inherited sensorineural deafness. Lancet 1998;351:394-8

14.

Morell RJ, Kim HJ, Hood LJ, et al. Mutations in the connexin 26 gene (GJB2) among Ashkenazi Jews with nonsyndromic recessive deafness. N. Engl. J. Med.

1998;339:1500-5.

15.

Abe S, Usami S, Shinkawa H, et al. Prevalent connexin 26 gene (GJB2) mutations in Japanese. J. Med. Genet.

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Marlin S, Garabedian E-N, Roger G, et al. Connexin26 gene mutations in congenitally deaf children: Pitfalls for genetic counseling. Arch. Otolaryngol.

Head Neck Surg.

2001;127:927-33

17.

Denoyelle F, Marlin S, Weil D, et al. Clinical features of the prevalent form of childhood deafness, DFNB1 , due to a connexin26 gene defect: implications for genetic counseling. Lancet 1999;353:1298-303.

18.

Grifa A, Wagner CA, D’Ambrosio L, et al. Mutations in

GJB6 cause nonsyndromic autosomal dominant deafness at DFNA3 locus. Nat Genet.

1999;23:16-8.

19.

del Castillo I, Villamar M, Moreno-Pelayo A, et al. A deletion involving the connexin 30 gene in nonsyndromic hearing impairment. N. Engl. J. Med.

2002;346:243-9.

20.

Everett LA, Glasser B, Beck JC, et al. Pendred syndrome is caused by mutations in a putative sulphate transporter gene ( PDS ). Nat Genet.

1997;17:411-22.

21.

Abe S, Usami S, Hoover DM, et al. Fluctuating sensorineural hearing loss associated with enlarged vestibular aqueduct maps to 7q31, the region containing the Pendred gene. Am. J. Med. Genet.

1999;82:322-8.

22.

Usami S, Abe S, Weston MD, et al. Non-syndromic hearing loss associated with enlarged vestibular aqueduct is caused by PDS mutation. Hum. Genet.

1999;104:188-92.

23.

Wilcox ER, Burton QL, Naz S, et al. Mutations in the gene encoding tight junction claudin-14 cause autosomal recessive deafness DFNB29. Cell

2001;104:165-72.

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