1 Electronic Supplementary Materials 2 A. Modeling stream flow and flood extents 3 Streamflow estimates for the Little Carp River were developed using the U.S. Army Corps of 4 Engineers Hydrologic Engineering Center (HEC) Hydrologic Modeling System (HMS)(US 5 Army Corps of Engineers 2000). The HMS simulates rainfall-runoff processes in a watershed or 6 region and models surface hydrology by arranging hydrologic elements in a dendritic network, 7 providing many different methods for defining the precipitation inputs of a watershed, 8 determining losses, and routing water through the stream network. 9 HEC-GeoHMS (Hydrologic Engineering Center 2000) was used to extract hydrologic, 10 topographic and topologic information from digital spatial data of a Little Carp River watershed. 11 The HEC-GeoHMS system for hydrologic modeling performs the following basic operations, 12 including, 1) raster-based terrain analysis and network definition, (2) vectorization of the 13 hydrologic elements, (3) parameterization of the hydrologic elements, and (4) topologic analysis. 14 During the first step, topographic analyses were used to define the hydrologic system based on a 15 digital elevation model (DEM) derived from a 1:24,000 USGS digital topographic map and GPS 16 coordinates of numerous stream cross sections. Using several GIS functions and the DEM, a 17 single downstream cell (in the direction of the steepest descent) was defined for each terrain cell, 18 so that a unique path from each cell to the basin outlet was determined. This process produced a 19 dendritic cell-network of 6 sub-basins within the Little Carp watershed that represented the paths 20 of the watershed flow system. Once these sub-basins were generated, the average SCS curve 21 number (an index the represents the integration of a hydrologic soil group, land cover, and 22 condition of the land cover) of each sub-basin was calculated as the average of the curve number 23 values within the sub-basin polygon. This curve number grid was developed using vegetation 1 1 cover data obtained from the Michigan Resource Information System (MIRIS), the percentage of 2 each hydrologic soil group (A, B, C and D) obtained from the U.S. Department of Agriculture’s 3 Natural Resources Conservation Service (USDA NRCS) Sate Soil Geographic (STATSGO) 4 database, and a look-up table that relates land use and soil group with curve numbers. Finally, 5 the sub-basin lag-time was calculated with the SCS formula where tp (minutes) is the sub-basin 6 lag-time (measured from the centroid of the hyetograph to the peak time of the hydrograph), Lw 7 (feet) is the length of the longest flow-path, S (%) is the slope of the longest flow-path, and CN 8 is the average curve number in the sub-basin. For a more detailed description of our hydrologic 9 model development see Goebel (2001). 10 The performance of the hydrologic model was iteratively evaluated by examining the mean 11 deviation, mean square deviation, and correlation between estimated and observed discharge 12 measurements collected over a 3 year period at the downstream end of each study reach 13 (Reynolds 1984). Specifically, we developed rating curves for each stream reach by collecting 14 streamflow data bi-monthly over a 3 year period when we could access the study sites (mid-April 15 to early December) and during various storm events (at least 3 storms form each study reach). 16 Rating curves were developed by measuring streamflow at the bottom of each reach using 17 standard techniques (Gore 1996). Additionally, we collected stream level data continuously over 18 the same 3 year period using pressure transducers located at the bottom of each study reach. 19 From these data (rating curves and stream level), we developed continuous flow estimates for 20 each reach that were used to help parameterize and verify the HEC-GeoHMS hydrologic model. 21 To examine the performance of the hydrologic model, we calculated the mean deviation 22 23 (MD), a measure of bias where large values indicate a poor fit, using the following equation: MD = Σ (Ej – Oj)/P. (1) 2 1 where Ej is the estimated discharge and Oj is the observed discharge for day j, and P is the total 2 number of observations. Positive MD values result if values of discharge are overestimated, 3 while negative values suggest the model underestimates discharge. We also calculated the mean 4 square deviation (MSD) which measures the precision of the surface hydrology model to predict 5 the observed or real discharge. MSD was calculated using the following equation: MSD = Σ (Ej – Oj)2/P. 6 (2) 7 Estimates of discharge with small MSDs are considered more precise than those with large 8 MSDs (Palmer 1990). Finally, the Pearson correlation coefficient between the estimated and 9 observed values is reported to determine the adequacy of the model to estimate discharge at each 10 11 stream cross section. Although the hydrologic model has a positive bias for each of the cross sections (MDs are all 12 positive), the model tends to predict discharge well on average, as indicated by the low MD 13 values (a measure of poorness of fit), especially for the clay lake plain reach (Table A1). 14 Furthermore, the modeled discharge estimates for each of the stream cross sections appears to be 15 relatively precise based upon the MSD values, and the relationships between the predicted and 16 observed discharge following storm events are strong (Table A1). As we are most interested in 17 the hydrologic models ability to predict streamflow associated with flood events, the strong 18 relationship between the predicted and observed discharge following storm events suggests the 19 hydrologic model is acceptable for our analyses (Table A1). 20 Once the HMS framework was in place and the model accuracy determined, we used the 21 HMS model to develop a long-term hydrologic record and flood frequency curves for each study 22 reach. To accomplish this, we used daily precipitation, snow depth, and temperature data from 23 1969 to 1999 obtained from the closest weather station maintained by the National 3 1 Oceanographic and Atmospheric Association (NOAA) located at Bergland Dam, Michigan 2 (46°35'N / 89°33'W, approximately 30 km to the south of the Little Carp River watershed). 3 Flood-frequency curves were generated for each stream cross section using the highest simulated 4 daily discharge values estimated by the HMS for each water year (November 1 – October 31) 5 over a 31-year simulation. Estimates of discharge for various flood intervals (e.g., 2, 10, 25, and 6 50-year flood events) were then calculated for each stream cross section using log-normal 7 frequency analyses (McCuen 1998). Modeled streamflow estimates for different flood 8 recurrence intervals of each study reach are listed in Table A2. 9 Next, we used the U.S Army Corps of Engineers Hydrologic Engineering Center River 10 Analysis System (HEC-RAS) to predict flood surface elevations for each stream cross section. 11 HEC-RAS is an integrated package of hydraulic analysis programs that performs steady flow 12 water surface profile calculations (Hydrologic Engineering Center 1998). The HEC-RAS utilizes 13 geometric data, which consists of connectivity information for the stream system and valley 14 cross-section data. Additionally, the model incorporates an estimate of channel roughness 15 (Manning’s n) for each stream cross section and adjacent banks, allowing us to incorporate the 16 influence of adjacent riparian vegetation. Once the boundary conditions (e.g., the starting water 17 surface elevations or bankfull conditions which were visually estimated in the field) of the model 18 are set and the geometric data entered into the HEC-RAS, the model requires only the discharge 19 (m3·sec-1) of the desired flood event to be entered in order to calculate flood surface elevations 20 (Hydrologic Engineering Center 1998). 21 After entering the stream and valley cross section data for each transect into the HEC-RAS, 22 we estimated values of Manning’s n using standard methods of field observation (Gore 1996). 23 Water surface elevations at each cross section in each of the three study reaches were then 4 1 estimated using predicted discharge values for frequent flood events (recurrence intervals of 2 2 and 10 years) and infrequent flood events (recurrence interval of 25 and 50 years) as modeled 3 using the HMS (Table A2). 4 5 References 6 Goebel PC (2001) Hydrogeomorphic controls on riparian areas of the northern Lake States. 7 8 Ph.D. Dissertation. Michigan Technological University Gore JA (1996) Discharge measurements and streamflow analysis. In: Hauer FR, Lamberti GA 9 (ed) Methods in Stream Ecology. Academic Press, San Diego, CA, pp 53-75 10 Hydrological Engineering Center (1998) River analysis system HEC-RAS 2.0. User’s guide. 11 U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA. 12 Hydrologic Engineering Center (2000). Geospatial hydrologic modeling system HEC-GeoHMS. 13 User’s guide. Version 1. U.S. Army Corps of Engineers, Hydrologic Engineering Center, 14 Davis, CA. 15 16 McCuen RH (1998) Hydrologic analysis and design, 2nd Edition. Prentice Hall, Upper Saddle River, NJ 17 Reynolds, Jr.MR (1984) Estimating the error in model predictions. Forest Science 30:454-468 18 U.S. Army Corps of Engineers (2000) Hydrologic modeling system HEC-HMS. User’s Guide. 19 Hydrologic Engineering Center, Davis, CA 20 21 5 Table A1. Performance of hydrologic model to predict discharge (m3·sec-1). Reach Percent r2 r2 MD MSD overestimates Jun - Aug Storms Upper 0.12 0.06 77.53 0.26 0.88 Middle 0.24 0.37 77.18 0.14 0.71 Lower 0.07 0.25 58.24 0.19 0.68 1 2 6 1 Table A2. Modeled discharge (m3•sec-1) and flood surface elevations (m) for three study reaches of the Little Carp River, Upper Michigan. 2 Stream Reach Type Flood recurrence Low-gradient High-gradient Low-gradient interval poorly entrenched moderately entrenched deeply entrenched Discharge (m3•sec-1) 4.7 9.4 9.4 Elevation (m) 0.53 0.61 0.63 Discharge (m3•sec-1) 9.9 15.3 19.0 Elevation (m) 0.76 0.80 0.86 Discharge (m3•sec-1) 14.1 22.0 29.2 Elevation (m) 0.90 0.98 1.04 Discharge (m3•sec-1) 17.5 28.4 38.1 Elevation (m) 1.00 1.13 1.17 1.4 yearsa 10 years 25 years 50 years a Roughly equivalent to bankfull discharge. 7 1 2 B.B. List of common species (occurring on > 5% of sample plots) encountered across riparian ecotones of the Little Carp River watershed. Functional Functional Guild Species Guild Species Graminoids Brachyelytrum erectrum Pteridophytes Athyrium fillix-femina Forbs Carex arctata Dryopteris intermedia Carex stricta Gymnocarpium dryopteris Cinna latifolia Lycopodium clavatum Leersia oryzoides Onoclea sensibilis Oryzopis asperifolia Thelyptris phegopteris Anemonella thalictroides Woody Abies balsamea Aralia nudicaulis Acer rubrum Clintonia borealis Acer saccharum Eupatorium maculatum Acer spicatum Galium triflorum Alnus incana Hydrocotlye americana Betula alleghaniensis Maianthemum canadense Fraxinus nigra Polygantaum biflora Lonicera canadensis Scutellaria laterifolia Ostrya virginiana Smilicina racemosa Prunus serotina Solidago gaegantea Rubus parviflorus Streptopus roseus Rubus pubescens Trientalis borealis Thuja occidentalis Urtica diocia Tsuga canadensis Urtica procera Viola cuculata Viola pubescens 8 1 C. Ordination diagrams 2 500 Low Gradient Poorly Entrenched DCA Axis 2 400 TsCa ArNu LyCl StRo BeAl DrIn TrBo AbBa MaCa 300 200 LoCa SmRa ClBo RuPa AtFi PoBi BrEr AcRu UrDi ViPu CaAr OnSe CiLa OrAs GaTr AnTh AcSa 100 SoGa RuPu HyAm LeOr CaSt ViCu 0 EuMa ScLa UrPr -100 -200 -100 0 100 200 300 upland 400 500 600 stream DCA Axis 1 Fig. C1. DCA ordination of ground-flora species by valley type. Species codes are first two letters of genus and first two letters of specific epitaph (e.g., TsCa – Tsuga canadensis). 9 1 2 upland 250 DrIn 200 High Gradient Moderately Entrenched DCA Axis 2 150 100 AcSa TsCa 50 0 MaCa ClBo ThPh BeAl stream -50 AcSp -100 -150 0 50 100 150 200 upland 250 300 stream DCA Axis 1 Fig. C1. Continued. 10 1 2 200 stream 3 150 High Gradient Deeply Entrenched RuPa CaAr DCA Axis 2 100 ThPh GyDr AtFi 50 ArNu RuPu DrIn 0 TrBo LyCl AcSp LoCa -50 MaCa AcRu upland CaSt ClBo TsCa BeAl -100 AcSa -150 -50 0 50 100 150 200 upland 250 300 stream DCA Axis 1 Fig. C1. Continued. 11 1 400 2 Low Gradient Poorly Entrenched FrNi DCA Axis 2 300 TsCa BeAl 200 OsVi AlRu 100 PrSe AcSa 0 AbBa -100 -50 0 50 100 150 200 upland 250 300 350 stream DCA Axis 1 Fig. C2. DCA ordination of overstory species by valley type. Species codes are first two letters of genus and first two letters of specific epitaph (e.g., TsCa – Tsuga canadensis). 12 1 upland 2 350 High Gradient Moderately Entrenched 300 BeAl DCA Axis 2 250 200 AcSa 150 OsVi 100 AcRu stream 50 0 TsCa -50 -100 -50 0 50 100 150 upland 200 250 300 stream DCA Axis 1 Fig. C2. Continued. 13 1 2 400 Low Gradient Poorly Entrenched FrNi DCA Axis 2 300 TsCa BeAl 200 OsVi AlRu 100 PrSe AcSa 0 AbBa -100 -50 0 50 100 150 200 upland 250 300 350 stream DCA Axis 1 Fig. C2. Continued. 14