ANIMAL CLONING AND GENETIC MODIFICATION: A PROSPECTIVE STUDY Report 1 to Institute for Prospective Technological Studies (IPTS) Seville July 2005 R&D and commercialisation activities Bruce Whitelaw1 Cecilia Oram2 Chris Warkup2 Ann Bruce3 1 Roslin 2 3 Institute, Roslin, Midlothian, Scotland Genesis Faraday Partnership, Roslin BioCentre, Roslin, Midlothian, Scotland Innogen (ESRC Centre for Social and Economic Research on Innovation in Genomics), University of Edinburgh, High School Yards, Edinburgh, Scotland Acknowledgements We would like to thank Moyra Forrest from Innogen for her help with the bibliographic review, Catherine Lyall from Innogen for her help with searching literature and Eileen Mothersole for contributing her secretarial skills. In addition we would like to thank all respondents of the survey and interviewees contacted in the context of the project. Prof John Woolliams of Roslin Institute and Dr Alan Tinch are thanked for their assistance with the economic modelling related to cloning in pigs. List of contents Executive Summary .............................................................................................................. 1 SECTION 1 INTRODUCTION ............................................................................................... 4 1.1 Introduction.................................................................................................................. 4 SECTION 2 OVERVIEW OF RESEARCH ACTIVITIES WORLDWIDE ................................. 5 2.1 Introduction.................................................................................................................. 5 2.2 Technical background.................................................................................................. 5 2.2.1 Methods of producing cloned animals ................................................................... 5 2.2.2 Methods of producing GM animals........................................................................ 8 2.2.3 Methods of producing GM and cloned animals ....................................................12 2.2.4 Summary: State-of-the-art....................................................................................14 2.2.5 Bibliometric analysis ............................................................................................15 2.2.6 Cloning ................................................................................................................15 2.2.7 GM.......................................................................................................................17 2.2.8 Cloning and GM ...................................................................................................18 2.3 Future vision ...............................................................................................................19 2.3.1 ES cells................................................................................................................19 2.3.2 What species and to what applications? ..............................................................19 2.4 Public versus private research ....................................................................................21 2.5 Main drivers for research ............................................................................................21 SECTION 3: OVERVIEW OF COMMERCIALISATION ACTIVITIES WORLDWIDE .............22 3.1 Introduction.................................................................................................................22 3.2 Methodology ...............................................................................................................22 3.3 Inventory of the companies active in the GM and/or cloned animal sector ..................23 3.4 Summary of products in the pipeline ...........................................................................26 3.4.1 Food production ...................................................................................................26 3.4.2 Molecular pharming .............................................................................................34 3.4.3 Xenotransplantation .............................................................................................39 3.4.4 Pet sector ............................................................................................................40 3.4.5 Sporting animals ..................................................................................................41 3.4.6 Endangered species ............................................................................................41 3.4.7 Other possible applications ..................................................................................42 3.5 Comparison of economic structure of industry sectors ................................................42 3.5.1 Food production ...................................................................................................42 3.5.2 Molecular pharming .............................................................................................43 3.5.3 Xenotransplantation .............................................................................................43 3.5.4 Pet sector ............................................................................................................43 3.5.5 Sporting animals ..................................................................................................43 3.5.6 Endangered species ............................................................................................43 SECTION 4 TECHNO-ECONOMIC BARRIERS TO GM AND CLONING .............................44 4.1 Main technical barriers................................................................................................44 4.2 Main barriers to commercialisation .............................................................................45 4.2.1 Cloning ................................................................................................................45 4.2.2 GM.......................................................................................................................46 SECTION 5 COMPARISON OF EU WITH NON-EU COMPETITORS ..................................48 5.1 Current research activities in the EU...........................................................................48 5.1.1 Summary of EU position ......................................................................................48 5.1.2 Summary of international perspective ..................................................................48 5.2 Current commercialisation activities in the EU ............................................................48 5.3 Non-EU countries closest to commercialising GM and cloned animals .......................49 SECTION 6 REFERENCES .................................................................................................50 6.1 References .................................................................................................................50 6.2 Bibliography................................................................................................................52 SECTION 7 GLOSSARY ......................................................................................................54 SECTION 8 APPENDICES ..................................................................................................58 8.1 Appendix 1 .................................................................................................................58 8.2 Appendix 2 .................................................................................................................60 8.3 Appendix 3 .................................................................................................................64 8.4 Appendix 4 .................................................................................................................70 List of figures Figure 1: Publications relating to cloning in mammals (excluding mice), birds and fish .........16 Figure 2: Geographical distribution of publications relating to cloning in mammals (excluding mice), birds and fish ......................................................................................................17 Figure 3: Publications relating to GM in mammals (excluding mice), birds and fish ..............17 Figure 4: Geographical distribution of publications relating to GM in mammals (excluding mice), birds and fish ......................................................................................................18 Figure 5: GM and cloned animals for food production in the pipeline for three different time periods ..........................................................................................................................33 Figure 6: GM and cloned animals for pharmaceutical production in the pipeline for three different time periods .....................................................................................................34 List of tables Table 1: Chronological History of cloning in different species ................................................ 6 Table 2: Dates of technological achievements in cloning and GM ........................................13 Table 3: First reports of GM livestock produced using cloning ..............................................19 Table 4: Inventory of companies active in the GM and/or cloned animal sector ....................23 Table 5: Description of GM and/or cloned animals for food production .................................33 Table 6: Annual yields of recombinant protein from various sources ....................................36 Table 7: Description of GM and/or cloned animals for pharmaceutical production ................36 Table 8: Description of GM and/or cloned animals for xenotransplantation...........................39 Table 9: Description of GM and/or cloned animals for pets ...................................................40 Table 10: Description of GM and/or cloned animals for sporting purposes ...........................41 Table 11: Key research priorities in cloning and GM .............................................................45 Executive Summary The aim of this report is to summarise research and commercialisation activities in cloned and GM animals worldwide. This report considers the technical and economic challenges facing these developments as well as the relative competitive position of the EU, in so far as this can be determined. Research The first mammalian species cloned using nuclear transfer was sheep, in 1996. Since then several species have now been cloned including cow, goat, pig, horse, cat and most recently dog. The most research, as measured by publications, has been on cattle. The second most studied species is the pig, mostly for xenotransplantation applications, where cloning is combined with genetic modification. The first genetically modified (GM) mammal was produced in 1985 and GM pigs, sheep, cattle, goats, rabbits, chickens and fish have all been reported. The main research use of GM techniques, as measured by publications has also been for xenotransplantation. A GM animal is one that has had ‘new’ DNA added to its germline. The introduction of new genetic material can range from the addition of a given sequence to the replacement of a given target sequence. Delivery of the new gene (or ‘transgene’) can be achieved by direct injection or viral infection. With each approach the target can be the oocyte, sperm or fertilised egg. Cloned animals can be produced by nuclear transfer and efficiency of cloning has been improved by several variations on this technique. Animals that are both cloned and GM can be produced by the insertion of genetic material into a cell either by direct injection or using viruses, followed by nuclear transfer from that cell to produce a clone. The first report of a genetically modified and cloned animal (sheep) was in 1997. Much of the research in cloned and GM animals has been accomplished by commercial establishments. GM and cloning research can significantly advance our understanding of biology as well as inform animal applications more directly. Research with animal embryonic stem cells and cloning can be expected for example to inform surgical use of stem cells in human medicine. Thus research on cloning and GM in animals can be viewed as underpinning important developments in human health. Commercialisation The main potential commercial applications of cloned and GM animals include: food production, production of pharmaceuticals (‘pharming’), xenotransplantation, pets, sporting animals and endangered species. Of the 35 companies worldwide identified as working with GM or/and cloned animals at the time of a survey undertaken for this report; 40% were working in ‘pharming’, 15% in food production, 12.5% in pets, 10% in xenotransplantation, 10% in endangered species and 7.5% in other activities. Cloned or GM animals already on sale include cloned pet cats, GM ornamental fish, cloned horses and at least one rodeo bull. Individuals from some endangered species have been cloned e.g. gaur, mouflon, banteng and African wildcat and cloning technology has been applied to restoring endangered breeds of cattle. A few new products are estimated to be at or near market and are likely to be commercially available within the next 5 years, on the basis of evaluation by the commercial companies themselves. Two pharmaceutical products from the milk of GM animals have completed (Phase III and Phase II) clinical trials respectively and may be on the market in the EU in the next few years. Cloned livestock (especially pigs and cattle) are widely expected to be used within the food chain somewhere in the world before 2010. It is likely that, within this timescale, it would not be economic for cloned animals to be used directly for food or milk production, but that 1 clones would be used as parents of slaughter pigs, beef cattle and possibly also milkproducing dairy cows. Faster-growing GM salmon are awaiting regulatory approval, principally for direct sale to fish farming markets in N. America, Asia and S. America. In the longer-term (beyond 2010) potential developments include the following: Food production: GM fish other than salmon. For terrestrial livestock, a number of potential applications include improving animal product composition, improved disease resistance, reduced environmental impact and sterility. Molecular pharming: A range of proteins produced from GM or GM and cloned cattle, goats and chickens. Recombinant human mono- and polyclonal antibodies may be produced by GM livestock beyond 2015. Xenotransplantation: Proponents suggest that GM pig organ xenotransplantation to humans is at least 10 years away Technical barriers Cloning The main challenge for cloning animals is to improve efficiency and overcome problems of Large Offspring Syndrome. Progress has been made with respect to both these, with some commercial sources questioning the need for further improvement based on their internal data for livestock species. Cloning dogs proved more difficult than cloning livestock, but has now been achieved. Cloning endangered species is difficult due to their unknown reproductive physiology and difficulties in providing a reliable oocyte maturation environment. The lack of availability of suitable recipients also constitutes a barrier. GM Major technical challenges with respect to GM include improving the accuracy of incorporating transgenes (to avoid impacts on other parts of the genome or multiple copies of genes) and improving efficiency. For GM fish, the lack of suitable regulatory elements to control transgene expression is a challenge. A major technical barrier in the food sector application of GM technology is the time required to incorporate GM animals into existing breeding schemes. One of the technological barriers to commercialisation of GM fish is sterilization efficiency, currently below 100%, which is important if the fish are to be farmed in sea cages. Technical barriers in the pharming sector include the long gestation period in cattle and the limited number of antibodies which can be produced. Production of pharmaceuticals in chicken eggs has been limited as the techniques for genetically modifying chickens have proved to be more difficult. Xenotransplantation remains a significant technical challenge, not least because multiple transgenes are needed in order to overcome immune rejection mechanisms. GM and cloned Specific technical challenges for GM and cloned animals include the effects of ageing on donor cells before nuclear transfer can be carried out and eliminating the need to include a selection marker gene during the genetic modification step. Main barriers for commercialisation Cloning The main barriers to commercialising cloning of food animals are consumer/food retailer acceptance and, particularly in the USA, the regulatory uncertainty which currently exists. 2 The regulatory uncertainty in the USA may be resolved within the next year or so. The economic barrier to entry into animal cloning is likely to be low. Although it is not yet clear what the costs of obtaining regulatory approval will be, these costs are likely to be substantially lower than for GM livestock. GM The main barriers are perceived to be regulatory approval and consumer/food retailer acceptance. Regulatory approval of pharmaceutical products from GM animals is seen as the principal hurdle followed by the time taken to get the product to market. Some of these barriers are common to all pharmaceutical products, but there may be additional uncertainties to be resolved for products from GM animals. A barrier to attracting venture capital to start-up businesses working in this area of science is the controversial nature of the work and the complicated IP situation for cloning technology. European competitiveness Research Cloning research is undertaken primarily in USA, Far-East and EU countries. Although a late entrant into the cloning research field, the Far-East may be rapidly becoming the major research player. The majority of GM research has been carried out in the USA and Europe, with Europe initially displaying a clear lead over the rest of the world. The majority of GM fish effort is in the Far East and USA. As with cloning, the Far-East is a late entrant into this area of research but is fast catching up.. If Europe aims to be a major player in cloning or GM research then it will have to focus on specific aspects of this subject and to co-ordinate its currently fragmented research effort (as is being done in the USA for example through initiatives such as the National Swine Resource Centre). Commercialisation We have identified 35 companies worldwide involved in producing GM animals, cloned animals or both GM and cloned animals. Of these, 63% are in N. America, 14% in Europe and 11% in Asia. Within the EU, France is the country which seems to be most actively commercialising GM and cloned animals. French companies are applying GM and cloning to pharming, sporting and endangered animal sectors. The Netherlands and UK each have one company active in the pharming sector. In terms of number of companies and scale of activity the USA has the most. Canada is second but with significantly less activity than the USA. We should however note that we experienced difficulty in obtaining information from companies in the Far East. Non-EU countries are applying GM and cloning to a broad spectrum of possible application sectors. The most significant difference between EU and non-EU countries is the focus of non-EU countries on the application of GM and cloning to food production. In contrast the companies in EU countries are applying GM and cloning principally to pharming but also to sporting or endangered animals. 3 SECTION 1 INTRODUCTION 1.1 Introduction Since the development of cloned animals will facilitate the production of GM animals and many of the applications of cloning (such as xenotransplantation) will depend also on the use of genetic modification, these two technologies are investigated together. The purpose of this study was to investigate the current status of developments in cloned and GM animals and more specifically to provide a comprehensive picture of R&D and commercial activities involving animal cloning and/or GM and their products world-wide; and a projected pipeline of products for the next 5-10 years. It should be stressed that, in relation to commercialisation activities, this study is very much a snapshot in time. Many of the companies involved in GM and cloning developments in animals are small companies and they operate in an area of significant commercial risk. Regulatory, trade and socio-economic aspects are further considered in reports 2 and 3. Cloned and GM animals can be used for a wide range of applications including food production, molecular pharming, xenotransplantation, the pet sector, sporting animals and endangered species. Development of animals to model human diseases and to investigate gene function in model animals have however been specifically excluded from this report. Within this report the term ‘cloning’ should be understood to mean somatic cell nuclear transfer (SCNT) unless otherwise stated and the term ‘animal’ should be understood to refer to non-human animals. This report is in five sections: Section 1 is an introduction Section 2 maps research and development activities worldwide involving cloned and GM animals Section 3 maps out commercialisation activities. Section 4 considers the technical and economic barriers to developments with respect to cloned and GM animals and finally; Section 5 considers the position of the EU in comparison to non-EU competitors. This study was conducted March-July 2005. The scientific aspects were investigated by staff at Roslin Institute, the commercialisation activities by staff at Genesis Faraday Partnership and co-ordination was provided by the Innogen Centre. The methodology consisted of literature and web surveys supplemented by interviews, bibliometric analysis based on Articlefirst and Web of Science, and questionnaires, as outlined in each of the relevant sections. Additionally, useful interchange of information took place with the Specific Support Action “Farm animal cloning and the public” and in a 2-day workshop held in Seville in June 2005, co-organised by the IPTS and the above mentioned SSA. 4 SECTION 2 OVERVIEW OF RESEARCH ACTIVITIES WORLDWIDE 2.1 Introduction This section aims to convey an overview of on-going research activities and technological developments in animal cloning and/or genetic modification worldwide, including national and EU funded programs. Specific emphasis is placed on short and medium term visions (5 and 10 year span). GM and Cloning are intertwined in both public perception and application, although they represent different technical methods in animal biology. This will be described using examples and species differences. Applications in large animals are mainly restricted to commercial projects due to the cost and effort involved. This aspect will be developed through discussion of the drivers and incentives for research in this area and contrasted to the main technical barriers for research. In addition, the position the EU holds in the global arena will be presented. This report is based on original data and quantitative information on GM and/or cloned animals, their offspring and derived products worldwide. It also builds on publicly available information in the literature, relevant databases (as outlined in Appendix 1) and expert interviews. The expert interviews were performed face to face when possible, with a few by phone, and by email. In total 34 experts in the cloning and GM field were contacted. The geographical distribution of the experts was 23 from the EC, eight from the USA and three from Australasia (including one from China). To emphasise, this section deals with the research aspects of cloning and GM. By definition there is a strong focus on technical and proof-of-concept aspects of cloning and GM. 2.2 Technical background 2.2.1 Methods of producing cloned animals Cloning in this context relates to the production of animals through transfer of the genetic material from one donor cell to a recipient unfertilised oocyte that has had its nuclear DNA removed (enucleation). This process is also known as somatic cell nuclear transfer (SCNT). Through the use of several individual cells from a given unique source and an equivalent number of recipient oocytes, several cloned animals can be produced. i. Overview Although in use and robust, the standard method for producing transgenic animals apart from mice is inefficient, not exact and costly. These limitations drove researchers to seek other methods. Half-a-century ago, the background to animal cloning was demonstrated by transplanting nuclei from the blastula of the frog to an enucleated oocyte, obtaining a number of normal embryos in the process. Subsequently, nuclei from various types of cell were transplanted to an oocyte that has been subjected to ultraviolet radiation to destroy the peripheral chromosomes. Again embryos were produced. These results establish the important principle that while animal cells become committed to their fate as development proceeds, the nuclei of most cells still retain all the genetic information required for the entire developmental programme and can be reprogrammed by the cytoplasm of the oocyte to recapitulate (restart) development (reviewed by Campbell et al. 1996). This ability of differentiated cells to be reprogrammed was dramatically demonstrated in 1997 through the publication by Wilmut and colleagues of the method that generated ‘Dolly’ the sheep (Wilmut et al. 1997). The birth of animals from differentiated foetal and adult cells also reinforces previous speculation that by inducing donor cells to become quiescent (cell-cycle resting state) it will be possible to obtain normal development from a wide variety of differentiated cells. In all species, it appears that the earlier the developmental stage at which nuclei are isolated, the greater their potential to be reprogrammed. Nuclear transplantation can be used to generate clones of animals with the same genotype by transplanting many 5 somatic nuclei from the same individual into a series of enucleated oocytes - cloning. In addition, by using a genetically modified donor cell a transgenic animal can be produced. Since the first use to produce sheep, a wide range of animals has been cloned including pigs, cattle, goats, rabbits, mice, rats, mules and horses and fish. In addition, various breeds within some of these species have been cloned. Table 1: Chronological History of cloning in different species Date first cloned Mammalian species 1996 Sheep 1998 Cow 1998 Mouse 1999 Goat 2000 Pig 2002 Rat 2002 Rabbit 2003 Mule 2003 Horse 2004 Cat 2005 Dog ii. Nuclear transfer Nuclear transfer (NT) is one of the most interesting and challenging areas of science to emerge in recent years. This procedure involves the transfer of a nucleus from a donor cell to an oocyte that has had its genetic material removed. The donor cell is somatic in origin and could be an embryonic or adult cell (so-called somatic cells) rather than a germ cell (sperm or egg) normally involved in reproduction. The donor nucleus is introduced by promoting fusion between the oocyte and a somatic cell and brief electric pulse is often used to achieve this as it also activates embryonic development by stimulating the mobilization of calcium ions. The success rate of nuclear transfer consistently falls within the range of 1 to 5% (of injected fertilised eggs) showing that at the moment the technique has an inherent inefficiency, although some commercial organisations now claim up to 30%. There are many theories as to the reason for this inefficiency but, at present, these remain speculative. Embryos transferred to surrogate mothers are lost in an unusual pattern, as the losses occur all the way through pregnancy and continue after parturition. There have also been defects in many cloned animals, with reports of defective immune systems, cardiovascular problems, obesity, urogenital abnormalities and others, many of which are fatal. Indeed, ‘Dolly’ herself was suffering from arthritis but no one knows whether this was due to the nuclear transfer process or a chance event in her life; ‘Dolly’ died of natural causes, a Jaagsiekte virus infection. Obviously the genotype (excluding mitochondrial DNA) of the cloned animal is dependent on that of the donor nuclei. If this donor cell carries a transgene (introduced genetic material in the form of a DNA sequence) then the resulting animal will be transgenic. The production of genetically modified and cloned animals was first demonstrated for random transgene integration in 1997 (Schnieke et al. 1997) and using a method that targeted the introduced gene to a specific site on the chromosome three years later (McCreath et al. 2000). 6 Alternatively, genetic selection of the nuclear donor can lead to production of genetically modified clones of the desired gender and appropriate production traits. iii. Variations on nuclear transfer Cloning to-date involves the use of a donor nucleus and recipient oocyte. As yet an unknown component of the oocyte is able to re-programme the donor genetic material such that it starts developing as an embryo and subsequently grows into an adult animal. If we were able to understand the signal provided by the oocyte – identify the components that are able to cause re-programming – we could perform the procedure without the use of an oocyte. In addition, it is possible that the donor genome could be provided as a molecular compound rather than a cell. As yet, this appears a long way off. Currently the source of all donor cells has been from somatic cell populations within the respective animal. In nuclear transfer reconstructed embryos, the co-ordination of donor nuclear and recipient cytoplasmic cell cycle phase is essential to maintain ploidy and prevent DNA damage. A critical factor in the success of nuclear transfer was the quiescent state of the donor cells in culture and the recipient enucleated egg allowing synchronization between the donor and recipient cell cycles. For the production of ‘Dolly’, this was achieved by lowering the level of serum in the culture medium, causing the cells to withdraw from their normal cell cycle activity due to lack of growth factors. However, the stage of the cell cycle at the time of reconstruction and the method of reconstruction may also have a significant impact on the subsequent development of the embryo and foetus through a number of other mechanisms that remain to be characterised. Variations with respect to the donor genetic material have been developed. Perhaps the most promising has been the remodelling of the somatic nuclei in vitro prior to cloning by nuclear transplantation – termed chromatin transfer. One approach involves permeabilisation of the donor cell and chromatin condensation in a mitotic cell extract to promote removal of nuclear factors solubilised during chromosome condensation (Sullivan et al. 2004). This treated cell is then used as the donor in the cloning step. There are claims that this approach can overcome the Large Offspring Syndrome often seen in cloning experiments. With regard to the actual procedure, numerous variations also exist including for example, hand-made cloning (Vajta et al. 2005). This method differs from the more established protocols by involving removal of the zona pellucida (a jelly-like substance surrounding the early embryo up to blastocyst stage) prior to enucleation and fusion, resulting in a limited (or no) requirement for micromanipulators. These variations may have individual technical advantages, some of which lend themselves to mechanisation of the cloning procedure, but they all still involve the use of a donor somatic cell and recipient oocyte. iv. Example applications The majority of research using cloning falls under two themes. The first is simply attempts to improve the method. Secondly, cloning has been used to investigate early embryo development and the reprogramming of the genome, including epigenetics. Much knowledge has been gained through these studies. In addition, research in cloning has been used to demonstrate the potential application of this technology. There have been three targets: cloning of genetically superior animals destined for animal breeding regimes; cloning of pet companion animals; and cloning of endangered or rare species. v. General issues Animal cloning has been with us for a decade. In this time it has transformed how we view cell biology, while significantly raising the biology debate within society. The importance of somatic cell nuclear transfer goes far beyond the scope of replicating animal genotypes. It is an invaluable experimental tool to address fundamental scientific issues such as genetic plasticity, cell differentiation, genome structure and function (including epigenetics) and 7 genome manipulation. For these reasons the importance of cloning is not for what it can achieve but for the technical support it can provide to animal and biomedical research. The latter includes the study of epigenetics, cancer and stem cell biology, cell therapy and regenerative medicine. For example, embryos produced by nuclear transfer from a patient's somatic cell offer one potential source of embryonic stem cells for treatment of human degenerative diseases. Inter-species cloning has become topical. This approach to mixing the species of origin of the donor and recipient cell offers some advantages for exploring scientific questions and provides tools to understand the bio-risk aspects of cloning. However, since the resulting animal would be a chimera of nuclear and mitochondrial DNA, its general use is currently being debated. It should also be considered that if embryonic stem (ES) cells were derived from animals these could provide a donor source that allows more efficient procedures. This would also have benefits for genetic modification. There is some general agreement within the cloning and GM scientific community, that if one scientific priority is to be identified, then the derivation of stem cells from species other than the mouse is arguably the most important (major theme within 23 EU scientists interviewed). 2.2.2 Methods of producing GM animals A GM animal is one that has had ‘new’ DNA added to its germline. Following the introduction of the transgene it is passed from one generation to the next in a well understood manner. The introduction of new genetic material can range from the addition of a given sequence to the replacement of a given target sequence. As such, the key aspect is the delivery of the ‘new’ DNA or transgene. This can be achieved by direct injection or viral (vector) infection. With each approach the target can be the oocyte, sperm or zygote (fertilised egg). i. Overview From a historical perspective the first GM mammals were transgenic mice (Gordon et al. 1988). It is still true today that the majority of transgenic mammals are mice and furthermore that the majority of technical developments are initially established in this rodent species. The pioneering work in the early 1980’s set the stage for the first transgenic livestock in 1985 (Hammer et al. 1985). All of this early work involved the delivery of the DNA transgene by direct pronuclear injection of zygotes. It was 20 years before this technology was truly furthered, with the demonstration that lentiviral vectors allow transgene delivery at previously unachievable rates (Whitelaw, 2004). This later technology has now been applied to mice, rats, pigs, sheep and cattle. Attempts to transform the germline of birds have been developed, although the technical hurdles have differed from those overcome for transgenic mammals. In parallel, germline transformation of fish has been widely achieved. ii. Pronuclear injection Direct microinjection of DNA was the first strategy used to generate transgenic mice. The technique involves the injection of DNA into one of the pronuclei (which contain the genetic material of the host in the form of chromosomes) of the zygote. Either short- or longsequence transgenes can be delivered. The procedure requires specialized microinjection equipment and considerable dexterity from the handler. The technique is reliable, although the efficiency varies, so that 5-40% of mice developing from manipulated oocytes contain the transgene. In general this efficiency drops with increasing size of transgene fragment. In livestock, the efficiency is lower for a number of reasons. First, the embryos are more fragile than those of the mouse making manipulation less efficient. Secondly, for most livestock species, visualisation of the pronuclei is difficult due to the presence of opaque lipid droplets in the cytoplasm. This often necessitates a centrifugation step and care is required not to damage the zygote. Pronuclear injection in domestic animals was first demonstrated in pigs. 8 Subsequently, transgenic cattle, goats and sheep have been produced using this method (Clark and Whitelaw, 2003). Founder animals can be mosaic for the transgene (i.e. only some cells carry the transgene), but once the transgene is transmitted through the germ line it tends to be stably inherited over many generations. The transgene tends to form head-to-tail arrays prior to integration although other arrangements are detected at integrated loci (it is not understood why these arrangements occur), and the copy number varies from a few copies to hundreds. Although not common, extensive deletions and rearrangements of the host DNA may often accompany transgene integration. iii. ICSI Originally developed to overcome infertility in humans, the injection of sperm heads directly into the cytoplasm of the oocyte termed intra-cytoplasmic sperm injection (ICSI) can be used to generate transgenic animals. The DNA transgene can be chemically-bound to the sperm head or simply co-injected with the sperm into the cytoplasm. This approach is appealing but, as yet, has not been widely taken up. This lack of support is largely due to issues of variability in the procedure. New developments include combining ICSI with recombinase enzymes to facilitate transgene integration (Kaneko et al. 2005) and the delivery of large transgene fragments, e.g. based on yeast artificial chromosomes. The latter approach can provide reasonably high efficiencies of up to 35%, in contrast to pronuclear injection which at best gives 5% in livestock. iv. Viral vectors Building on the existing use of replication-defective viral vectors for gene therapy in humans, several vector designs have been applied to transgenesis in livestock. Vectors derived from retroviruses – either the oncoretrovirus or lentivirus – have proved most effective. These viruses are complex in genetic make up, and their life-cycle involves integration into a host genome. The vectors based on retroviruses are engineered through the removal of numerous key DNA sequences such that they can integrate but are then unable to become mobile again. Thus they cannot replicate, a prerequisite for a successful viral vector. In addition, some reports claim success with adenovirus vectors (Tsukui et al. 1996) but this method has not seen widespread uptake. Recombinant retrovirus vectors provide a natural mechanism for stably introducing DNA into the genome of animal cells. Retroviruses are able to infect early embryos, so recombinant retroviral vectors can be used for germline transformation. An advantage over the microinjection technique is that only a single copy of the retroviral provirus is integrated at a given locus, and the genomic DNA surrounding the transgenic locus generally remains intact. Animals can, however, carry more than one integration event at different chromosomal locations. The infection of preimplantation embryos with a recombinant retrovirus is technically straightforward and, once the infected embryos are implanted in the uterus of a foster mother, can lead to germ line transmission of the transgene. The primary advantage of lentiviral vector is the spectacular efficiency they afford. Using the standard microinjection procedure, between 1-5% of injected eggs will give rise to a transgenic founder animal which translates into between 5-20% of births that are transgenic. Through the use of lentiviral vectors, as long as a high enough virus titre is produced, upwards of 30% of the injected eggs result in a transgenic founder animal, with up to 90% of births being transgenic. This has two immediate effects: firstly, to reduce the number of animals used, constituting a major welfare benefit; and secondly, a substantial reduction in cost. The latter should result in an increase in publicly funded opportunities leading to an increased use of the technology in the academic world. The use of viral vectors is not expected to be taken up by the commercial sector, due to public suspicion of anything to do with viruses. This restriction on the use of viral vectors may diminish if the use of virus-based delivery systems becomes commonplace in medical therapies. 9 The major disadvantage of viral vectors is that they are limited in the amount of DNA they can carry; about 4.0 kb for an oncoretrovirus, 7.5kb for adenovirus. Thus they can only carry small transgenes, limiting their application. In addition, use of oncoretroviruses has been restricted by the commonly observed methylation-associated transgene silencing and their propensity to affect expression of host genes that neighbour the site of transgene integration; similar concerns are appearing in some studies using lentiviral vectors which can result in weak expression patterns. If this occurs then host gene activity can be affected which could be disadvantageous to the animal. There scientific community is currently attempting to devise strategies to overcome these limitations. v. Transgenic birds The development of techniques for the genetic manipulation of poultry has lagged behind the technology available in mammalian systems. Initially hope was pinned on the tried and tested mammalian approach, that of microinjection but, given that access to the chicken egg is only available after it has started to develop and thus comprises many thousands of cells, this has met with little success. Nevertheless live transgenic birds can be produced by this route demonstrating that manipulation of the chick zygote is possible but inefficient (Love et al. 1994). Subsequently considerable progress has been made in deriving embryonic cells, and demonstrating their ability to contribute to somatic chimeric birds is well-established. However, germline transmission of gametes derived from genetically modified embryo cells has not been described. Although transfer of primordial germ cells from a donor embryo to a recipient and production of functional gametes from the donor-derived cells is possible, genetic modification of primordial germ cells before transfer and their recovery through the germline has not been achieved. Very recently the use of lentiviral vectors for the production of transgenic chickens has been evaluated and the efficiency of production of founder transgenic birds and of transduction of the germ line was at least 10-fold higher than has been described using retroviral vectors (McGrew et al. 2004). Furthermore, high-level transgene expression was observed and maintained through subsequent generations. Cloning has not been achieved for birds and it is not obvious how this technology would be developed in birds. vi. Transgenic fish Gene transfer technology in fish has also lagged behind that of mammals but for different reasons. Transgene delivery has not proved to be a limitation, rather the lack of suitable transcription regulatory elements to control transgene expression. The first transgenic fish carried transgenes driven by mammalian or viral regulatory elements, and their performance varied considerably. This has now been overcome through the use of gene regulatory sequences derived from fish species. Like amphibians, the microinjection of DNA into fish oocytes and early embryos leads to extensive replication and expression from unintegrated transgenes. Some of the DNA integrates into the genome, leading to germ line transmission, and the production of transgenic fish lines. There is now considerable effort to improve on this random integration through the use of viral vectors or vectors based on transposable sequences such as Sleeping Beauty transposon. There has also been considerable effort to derive ES cells for fish species. However, this remains a largely unattained goal. Although zebrafish embryo cell cultures that exhibit characteristics of embryonic stem cells have been described, the successful contribution of the cells to the germ-cell lineage of a host embryo has not been reported. Analogous cells have been reported for medaka and some other species but again none have reliably 10 achieved germ-line transformation. A range of fish have been genetically modified (see section 3.3.1;i). The development of GM fish has raised substantial concerns with regard to environmental risk. Risks are further considered in Report 3, section 3.1. vii. Example applications The most established application of GM to animals is that of the bioreactor – animals that produce proteins destined for biomedical use, usually from a transgene designed to target protein production to milk. There have also been attempts to produce animals with altered production characteristics, ranging from growth rate through altered product composition to wool production, and as yet unsuccessful attempts to generate GM animals with enhanced ability to combat disease. In birds the main application target is bioproduction of proteins, the bird (all effort to date-has been with the chicken) becoming a bioreactor. Recent progress with lentiviral vectors has produced the first real technical successes in this field. In fish the main application has been to enhance growth rate, with some spectacular successes achieved. However, history may deem the most significant to be the failed attempt to generate fish as pollution monitors. These fluorescent fish have become the first commercially available GM animals, attracting interest as glowing pets. More recently effort has been applied to devise refined gene manipulation strategies across all species, using viral or transposable vectors and recombinase systems. viii. General aspects Direct transgene delivery is associated with specific characteristics regardless of the precise delivery route or vector. First, the transgene effectively integrates at random within the genome. As a consequence, rare integration events can disrupt an endogenous gene. Evidence from mouse studies indicates that this is a rare event, at least as evaluated in hemizygous transgenic lines. Secondly, the transgene can integrate as a single-copy or multiple-copy. There is no control over either of these aspects of the process. It is possible to retrospectively reduce a multicopy transgene locus to a single copy locus. This requires that the transgene is engineered in vitro to carry a single bacterial recombinase site, e.g. LoxP. Then in the presence of the bacterial recombinase, e.g. Cre, which can be transiently delivered to the oocyte or zygote, the locus recombines by deleting the internal transgene copies leaving a single copy. The random arrangement of transgene units within a multicopy locus, i.e. head-to-head or tail-to head or tail-to-tail, means that the recombinasebased strategy will not always be successful. To-date, although successfully employed for transgenesis in mice (Ristevski, 2005), the recombinase approach has not been applied to larger mammalian species. There are two general disadvantages of direct transgene delivery as a direct result of the above characteristics. These apply to all species tested to-date. The first reflects the site of integration. The activity profile for a given transgene can be modulated by where it has integrated into the host genome. For example, if a transgene integrates next to a string tissue-specific gene transcriptional enhancer, the desired transgene cell-type activity profile may be affected by specificity of the enhancer rather than what was intended. Alternatively, if a transgene integrates into heterochromatin, a region of the genome that is devoid of gene activity, the transgene can be silenced (inactivated). The second disadvantage is that most transgenes do not express on a copy-number basis, i.e. more transgene copies do not necessarily mean more transgene activity. There are exceptions to this, where a transgene incorporates a dominant transcription regulator, sometimes called a locus control region. In specific cases the presence of such dominant transcription sequences can result in copy-dependent transgene activity. Combined, effects of site of integration and copy-number are often termed the position-effect. The position-effect can range for complete transgene inactivity, through partial activity or 11 inappropriate temporal or spatial activity, to the desired and expected expression profile. In practice, the position-effect means that several individual transgenic lines have to be generated and screened for the desired expression profile i.e. each transgenic line is based on a unique animal. The use of some viral vectors, e.g. those based on lentivirus, appear to overcome one of these limitations in that they are associated with efficient and reliable transgene activity profiles (although, more studies are required to confirm this positive attribute). It is not understood why this is so, but it is anticipated that investigation of the chromatin structure associated with integrated viral vectors will likely address this question. 2.2.3 Methods of producing GM and cloned animals The technologies of cloning and GM can be combined. This occurs when the donor cell for cloning is GM, i.e. transgenic. Thus the cloned animal produced will carry the transgene and transmit the transgene to its offspring. i. Rationale The limitations of direct transgene delivery – integration site and copy-number combining under the term position-effect – have been circumvented in mice through the use of homologous recombination (DNA sequence specific recombination between two DNA fragments) in ES cells and in livestock through the use of nuclear transfer (cloning). The search for ES cells from species other than the mouse (and similar cells for humans) has not been successful to date. This was one of the main drivers for alternative strategies which lead to development of the nuclear transfer method. Being able to generate animals from cells that had been manipulated in vitro was a significant breakthrough in animal biotechnology. ii. Embryonic stem cells Embryonic stem (ES) cells are isolated from undifferentiated cells of the early embryo, specifically from the inner cell mass of the blastocyst. This very peculiar cell type displays three useful properties. First, an ES cell is capable of self-renewal. Given the appropriate culture conditions ES cells will divide to produce more undifferentiated ES cells indefinitely (or until the conditions change or become exhausted). Secondly, ES cells display a high frequency of homologous recombination. This allows specific genetic modifications to be engineered, and subsequently selected in such a way that only cells with this genetic change are present within the test cell population. In this way a gene can be destroyed, replaced by an alternative form of the gene or a completely different gene, single point mutations incorporated or controlled chromosome rearrangements induced. Finally, ES cells have the capacity to differentiate into the full range of embryonic tissues, and thus can be used to generate an entire animal after incorporation into an early embryo. Specific genetic changes can be induced into an ES cell, selected for in vitro, returned to the early embryo usually at the blastocyst stage where the cells resume their normal program of development resulting in the birth of a GM animal. The founder animal is usually a chimera derived from the ES cell and the host blastocyst. The extent of chimerism varies from individual to individual, and when the ES cell has contributed to the germline the resulting second generation animals will be entirely GM. Although there has been considerable interest in deriving ES cells from mammalian species other than the mouse, and many claims made over the last two decades, none of these reports have meet the definitive test of germline transmission. In addition, at the moment evidence is emerging that pluripotent stem cells can be isolated from the testes. If robust, this source of stem cells may offer new approached to the generation of GM animals. 12 iii. History of cloned GM animals The first transgenic animal to be produced by cloning with transgenic donor cells was ‘Polly’ in 1997 (Schnieke et al. 1997). This sheep carried a transgene designed to target expression of human factor IX to milk. The transgene was randomly integrated into the host genome in vitro. Three years later cloning was employed in gene targeting strategies (McCreath et al. 2000). In this way the procedure is analogous to the use of homologous recombination in mouse ES cells. This is arguably one of the most common uses of cloning technology and todate transgenic sheep, pigs and cattle have been generated in this way. Ironically even though the driving force behind the development of nuclear transfer in animals was to provide a cell-base route to transgenesis, there have been only a handful of studies exploiting this potential. There have been two interconnected reasons. The first is that the process is technically demanding and inefficient. Considerable financial support is required to undertake this methodology. Specifically, gene targeting in somatic cells rather than embryonic stem cells is a challenge. The recombination frequency in somatic cells is less than that of ES cells. In addition, somatic cells have a limited lifespan so all the manipulative steps involved in a gene targeting event must be accomplished prior to cellular senescence. Furthermore, dogma had it, justified on the basis of our understanding of chromatin, that targeting of inactive (transcriptionally silent) genes or double targeting to produce homozygotes was difficult. There have been a few reports of double targeting events, but it is only recently that this objective has been overcome. The reporting in 2004 of sequential gene targeting in cattle (Kuroiwa et al. 2004) has provided a major step forward for this technology. The method consists of sequential application of gene targeting by homologous recombination in fibroblasts (somatic cells) and rejuvenation of cell lines by production of cloned foetuses. Although technically a tour de force this is still hugely demanding technically and very expensive. Several groups, including some in Europe, are currently attempting to repeat this procedure. Table 2: Dates of technological achievements in cloning and GM Event (first report) Date Research group Country GM cloned livestock 1997 PPL Therapeutics Ltd UK Gene knock-in 2000 PPL Therapeutics Ltd UK Gene knock-out 2001 Roslin Institute UK Large transgene 2002 Kirin Brewery Co Japan Sequential targeting 2004 Hematech LLC USA One aspect of the above major events in cloned and GM animals is that most were accomplished by commercial establishments. Secondly, most studies to-date, have suffered from the Large Offspring Syndrome (LOS) and developmental defects that result in foetal death. It is assumed that these defects are a continuum of phenotypic responses to some, probably nutritional, effect of in vitro culture rather than cloning per se, as LOS is seen for in vitro cultured embryos that have not been cloned (Lonergan et al. 2003, Wrenzycki and Niemann 2003). LOS relates to the often-observed birth of large offspring in cloning studies. Overgrowth phenotypes across the species exhibit many common features, including alterations in organ and tissue development, and placental anomalies. Imprinted genes have been implicated in this syndrome and current understanding points to sub-optimal nutritional components of the in vitro culture medium required during cloning (and other embryo manipulative processes). 13 In addition, LOS is only a problem in the first generation cloned animal. There is no evidence that the phenotype is transmitted to the offspring. As culture media become more defined and the procedure more routine, at least in the larger commercial breeding companies, the frequency of LOS is reducing. Alternatively, modification of the donor genome and the chromatin encompassing it (chromatin remodelling) has also been proposed to reduce the welfare issues. Compared with nuclear transfer, chromatin transfer shows a trend towards greater survival of cloned animals (but has only been performed in cattle so far; Sullivan et al. 2004). Notwithstanding all this progress, it is not clear yet whether the limitation of LOS has been truly overcome. iv. Example applications To-date the generation of GM animals using cloning has been applied to two goals. The first one that has attracted a considerable amount of research is the generation of animal donors for xenotransplantation. The second is for production of animal bioreactors. This latter application is the closest to commercial reality with several products derived from transgenic livestock in late clinical trials. Cloning by nuclear transfer has also been applied to fish, specifically zebrafish, but it is not clear what advantage this offers over the already efficient standard breeding strategies that can be employed in fish (particularly in view of the high fecundity of fish). v. General aspects There are two further issues that should be considered in regard to the generation of cloned GM (transgenic) animals, transgene design and donor cell senescence. Most issues of transgene design are easily accommodated with current molecular biological techniques. However, most transgene designs include a selection marker gene which allows only the desired genetically modified cells within a large population of cells (most of which do not carry the transgene) to be selected for. The non-transgenic cells die since they do not harbour the selection marker gene, e.g. resistance to puromycin which causes inhibition of the translation of mRNA into protein thus killing a cell. The presence of some selection marker gene sequences has been associated with gene silencing events while there is also some concern of generating animals expressing antibiotics. There are strategies available, e.g. through the use of a recombinase system, that enable these sequences to be removed. There is no reason why they cannot be applied to animals; they are applied routinely in mice. The second issue of donor cell senescence has proved problematic. Somatic cells, the donor cell type in cloning, have a limited lifespan in culture. This makes the process of gene targeting, which involves an extended selection step during which non-targeted cells are killed, difficult, i.e. by the time targeted cells have been selected and isolated, the cells have senesced making them inappropriate donors for nuclear transfer. Attempts to overcome this have included the use of telomerase to extend the life span of the target cell. Although some success has been achieved this is not an ideal approach given that the resulting animal is derived from altered cells. Recently, the issue has been largely overcome through the use of sequential cloning and rejuvenation of cell lines through the production of a foetus (Kuroiwa et al. 2004). This procedure remains to be repeated to test how robust it is. Nevertheless, it appears that a major step forward has been achieved. 2.2.4 Summary: State-of-the-art Scientists have been able to generate transgenic livestock for two decades. First through the tried and tested but inefficient method of pronuclear injection, but only recently within the last few years have major advances been achieved through the use of specific viral vectors. Not only do lentiviral vectors allow efficient genetic modification but they also appear to allow efficient transgene expression by apparently overcoming gene-silencing events. They do have their limitations and further development is required. 14 The desire for a cell-based system led to the development of nuclear transfer (cloning) in 1996 with the generation of the sheep ‘Megan’ and ‘Morag’ (Campbell et al. 1996). Morag is still alive and is now nearly ten years old. This paved the way for gene-targeting, which was achieved in 2000 (McCreath et al. 2000). Nevertheless, the generation of GM animals through the use of cloning is still technically demanding. Last year, the development of a sequential cloning protocol has again taken the field forward (Kuroiwa et al. 2000), although this use of cloning is still very expensive. Cloning has developed from this perspective into a tool in its own right. Since the first demonstration in 1996 using embryonic cultured cells, then the following year with the generation of ‘Dolly’ from adult mammary cells, cloning has been applied to several species. Variations on the procedure and modification to the donor cell have been developed, while recent claims suggest that the welfare issue of developmental defects might be overcome through controlled in vitro culture conditions. Although research still progresses in the academic arena, the commercial world has already taken this method onboard with the future application in the hands of the regulators and commercial viability. Further information on the technical aspects of cloning and GM animals can be found in the references listed under the bibliography section of this report. 2.2.5 Bibliometric analysis We have performed a web-based search of the scientific literature. This provides a flavour of the reported achievements in cloning and GM but is not definitive. No one database is exhaustive in its coverage of these topics, nor is there consistency in the use of terms. Specifically we do not believe that there is full representation of the scientific literature for countries in the Far-East, in particular China. Nevertheless, the data is sufficient in our estimation to provide an overview of the progress in cloning and GM. We searched the following web-database resources; Articlefirst on Firstsearch and Web of Science. The former is limited in that neither URLs nor authors’ addresses are provided. The latter did not give thorough coverage of key journals; these we searched through their respective journal web pages (Nature, Nature Biotechnology, Nature Genetics, Nature Medicine and EMBO Journal). The search was restricted to English language publications, ignored GM/cloned mice and insects, and focussed on mammals, birds and fish. Our remit was to focus only on the scientific literature not grey literature. Where possible we identified from the authors affiliations which country led the work, subdividing the field into cloning, GM or cloning and GM. This was not always possible. A more detailed methodology is given in Appendix 1. 2.2.6 Cloning We identified just over 500 publications. The vast majority, estimated at 90%, have public funding support. This figure must be treated with caution, as the involvement of commercial funding is not always transparent in the author affiliations. The majority of publications address technical aspects of cloning and attempt to reduce the inefficiency and LOS. It is fair to say that the key papers have come from both public and commercial funded research. We have summarised the data below, and highlighted specific aspects of this study. 15 Figure 1: Publications relating to cloning in mammals (excluding mice), birds and fish Cloning hit the headlines through work performed at Roslin Institute. The first paper described the generation of ‘Megan and Morag’ from foetal cells and was published in 1996 (Campbell et al. 1996); the following year ‘Dolly’ was presented to the world (Wilmut et al. 1996). There are publications concerning the idea of cloning prior to these, all except one for work with cattle. Subsequent to these publications, the output as measured by scientific publications rose steadily to peak at about 100 per year in 2002. The importance of this field is reflected in the emergence of at least one scientific journal dedicated to animal cloning. The publication level has remained stable over the following two years (2003-2004). This may reflect the amount of funding in cloning across the world, which may have reached a plateau. In the first 5 months of this year (2005) only 20 publications were identified and if this rate is sustained over the full year then the total could be about 50. This would be a substantial decrease on the previous 5 years. Whether this trend will appear and what it reflects with respect to animal cloning research is not clear. The following species have been cloned: sheep, pig, cow, goat, rabbit, horse, mule, cat, fish and dog. By far the most research has been with cattle, resulting in approximately 50% of scientific publications. The next most studied is the pig followed by sheep. Combined, these three species account for 70% of scientific publications. In addition a variety of rare or endangered breeds within these species have been cloned. Two key publications are worth noting in this regard. The first in 1999 (Wells et al. 1998) used cloning to preserve the last surviving cow of the Enderby Island cattle breed; the second in 2001 (Loi et al. 2001) demonstrated that post mortem cells can be used to recover an animal. Currently, there is considerable interest in the Far-East, particularly China, in this application of cloning. Only recently, since 2001, have reports on the (animal) product quality, animal welfare and other safety aspects have started to be addressed. To-date, these publications account for only 3% of the total. 16 Figure 2: Geographical distribution of publications relating to cloning in mammals (excluding mice), birds and fish It is perhaps through analysis of the geographic distribution of scientific publications that the most interesting trends appear. The USA and Far-East have each produced approximately the same number of publications. We are of the opinion that the full extent of work in China and other countries in the Far-East was under-represented in the databases we searched. Therefore we believe that the majority of scientific publications concerning cloning are from this part of the world. This geographical distribution is all the more dramatic if the publication output of last year and this year are analysed. During 2004 and up to May of 2005, 50% of the scientific publications have come for the Far-East. Furthermore, 20% of the total output from the Far-East has appeared during this period. This implies that, although a late entry into the cloning research field, the Far-East is now, by far, the major contributor. Europe, although the initial leader in this field, now lags behind both the USA and the FarEast. We see no reason why this trend will not continue; if Europe aims to be a major player in cloning research then it will have to focus on specific aspects of this subject. 2.2.7 GM We again identified just over 500 publications. Although similar in number to that identified for cloning, the distribution of publications concerning GM is distinct. Figure 3: Publications relating to GM in mammals (excluding mice), birds and fish This field started earlier than cloning with the first report of GM livestock in 1985 (Hammer et al. 1985). This initiated the research into GM animals and the number of publications rose 17 over the following years to 45-50 per annum in 1997. This rate has been sustained since then, although as with cloning research, a possible decrease may be happening this year. GM sheep, pigs, cattle, goats, rabbits, chickens and fish have all been reported. The primary species of interest has been the pig with 32% of publications. The second most reported GM animal are fish (15%), e.g. tilapia, trout and salmon. Notably, in 2004 and up until May of 2005, the rate of publications in birds and fish has been maintained, indicating considerable current interest in these animals. The main use of GM has been to address the goal of generating animal donors for xenotransplantation surgery (22% of scientific publications). This trend is continuing with 21% of 2004 to May 2005 publications concerning xenotransplantation. The second application is pharming (17%), however this interest appears to be reducing (13% of 2004 to May 2005 publications). We are less clear on the geographical distribution since the databases from which the information was obtained were limited in affiliation recording. Nevertheless it was clear that the majority of research had been carried out in the USA and Europe; with Europe displaying a clear lead over the rest of the world. As with cloning, the Far-East is a late entrant into this area of research but fast catching up. For the future, Europe needs to provide the support, on focussed specific aspects, if it wishes to enable its current lead position to be maintained. Timing is of the essence if the emerging momentum of the Far-East is to be challenged. In this regard, the USA has already started to consolidate its efforts, through nationally funded facilities, to combat the international competition. In the biological sciences, Europe has not pursued this approach. Figure 4: Geographical distribution of publications relating to GM in mammals (excluding mice), birds and fish 2.2.8 Cloning and GM The first publication using cloning to produce a transgenic animal was in 1997(Schnieke et al. 1997). In both papers, the work was performed by a UK-based company. Indeed the majority of scientific publications using cloning to produce a GM animal have had commercial financial input. This largely reflects the huge financial cost of combining these technologies and the potential commercial benefits. Reflecting this, just less than 100 scientific publications were identified by our search. To-date transgenic cattle, pigs and sheep have been produced combining cloning and GM methodology. 18 Table 3: First reports of GM livestock produced using cloning Date Species Commercial/public Country Topic 1997 sheep Commercial (PPL Therapeutics) UK pharming 1998 cow Academic (University Massachusetts) 2002 pig both commercial and academic USA (Immerge BioTherapeutics Inc. plus Universities in US and Korea; and PPL Therapeutics) of USA methodology xenotransplantation Most work combining cloning and GM is currently performed in the USA and the Far-East. There is interest within Europe, specifically in Germany and Italy. Without question, at the moment the combination of cloning and GM provides the most refined and precise form of genetic manipulation. However, it remains inefficient and therefore expensive. Any technology that provides either more efficient or cheaper technology can be viewed as a competitor to cloning and GM. As with all scientific breakthroughs it is hard to see where this competitor will come from. 2.3 Future vision The technologies of cloning and GM have several applications. First and foremost they provide powerful tools with which to investigate biology. Secondly they can delivery novel biotechnologies aimed at wealth creation and advancement of society. In addition, they may offer refined animal breeding applications for agriculture that are also of use in companion animals. Finally they provide a focus for public debate into science and society. The potential impact on society of the first two and last applications should not be underestimated. These technologies can significantly advance our understanding of biology (within 5 years), our ability to overcome disease and improve human health and animal welfare (5-10 years), and provide a vehicle for public engagement in science. Indeed, the application of cloning and GM in these areas is already happening. 2.3.1 ES cells One key target for the future, and one that could overcome the current limitations of cloning and GM, is the derivation of ES cells from livestock species. There has been considerable activity in this area for many years, many claims have been made but as of yet no truly robust livestock ES cells have been reported. Combining GM in ES cells, with or without cloning could constitute a significant advancement and, therefore, should be a major goal for the future (5-10 years). Given the expertise available within Europe across a range of species it is possible that this advance could be lead by Europe. Finally, and importantly, it should not be forgotten that research with animal ES cells and cloning can be expected to inform on surgical use of stem cells in human medicine. Thus cloning and GM can be viewed as underpinning important developments in human health. 2.3.2 What species and to what applications? Research into cloning and GM has largely focussed on improving and refining the technology. As such the choice of species has not always been of primary focus. With regard to application of cloning, most research has been with cattle and pigs, even though the first cloned mammal was a sheep. With regard to cloning and GM applications two issues have predominated. First for research into xenotransplantation the majority of effort has been on generating transgenic pigs, latterly more and more through the use of cloning, and initially in research projects in mice. With 19 regards to pharming and the generation of animal bioreactors, the majority of research has addressed producing proteins of biomedical importance in milk. For this the mouse has been extensively used as a model, with more applied projects in sheep, goats, pigs, cattle and rabbits. In birds, all projects have had a commercial aim given the difficulty and expense involved in generating GM birds; all work has been with chickens. It is possible that the recent development of lentiviral vectors may enable expansion into more basic scientific projects (i.e. what does a gene do in a given tissue?) and different bird species. Fish transgenesis can be used to study gene function and regulation, e.g. in species such as the zebrafish and medaka, which are considered important model species to understand biology, and to improve the traits of commercially important species such as salmon and trout. In the following discussion we have reflected what the scientific community considers to be the most likely areas of research (from direct questioning of a panel of scientists in the field of cloning and GM) rather than merely cataloguing of all that has been reported in the literature. In addition, future effort will be applied to developing the tools and proof-of-concept evaluations in these areas; not surprisingly since some will provide intellectual property the details of these experiments have not been made available to this report, therefore we can merely highlight the areas that we anticipated to be pursued. i. Animal breeding for agriculture Uses of cloning and GM in animal breeding to produce food products that are close to commercialisation are reported in Section 2 of this report. Cloned and GM animals that have an increased ability to overcome or even resist disease may be achieved in future, e.g. animals unable to catch or transmit BSE. In this regard, cattle less susceptible to mastitis have been reported that carry a lysostaphin-transgene delivered using the cloning method. One area that is attractive excitement, but has yet to be demonstrated, is the use of RNA-interference to destroy infectious pathogens. The considerable effort currently being applied to this topic should enable an evaluation to be achieved within the next 5 years. However, in order to generate animals that are able to resist all form of mastitis multiple transgenes will be required. Progress in the development of vectors capable of delivering multiple transgenes could present a major step improvement in the technology (within 10-15 years if given enough support). ii. Xenotransplantation Within the scientific community this topic raises most interest. Europe has an interest in this topic through work in Germany and Italy. It is hard to gauge whether this reflects true optimism that it will be successful and provide the much needed increase in donor organs or that it posses a huge technical challenge for science to overcome. Again there is a need for multiple transgenes if this application is to be realistic. There is also considerable optimism for a similar application, the use of cloned and GM animals as models of human disease (within 5 years). The aim would be both inform on the disease progress and enable refined intervention strategies be designed. Possible examples include generating pigs with retinitis pigmentosa or melanoma and sheep with cystic fibrosis. iii. Bioreactors Uses of cloning and GM to produce pharmaceuticals that are close to commercialisation are reported in Section 2 of this report. iv. Underpinning stem cell therapy One very important legacy of cloning is the relatively new thinking that the differentiation state of a cell can be altered. This opens up the possibility of stem cell therapies for human 20 disease. Combine this with GM technologies and there is the real possibility of refined surgical intervention in diseases such as cancer. Research into cloning and GM underpins this exciting image of future medicine. Research into cloning and GM of animals therefore provides a valuable and powerful tool in the biologists’ armour to fight disease. If successful, the impact of this avenue of research on human health and through providing the base of commercial ventures and wealth creation is huge. 2.4 Public versus private research The majority of cloning and GM research relies on public funding. The biggest projects are commercially supported or performed in the private sector. Within Europe most public funding research is performed in the UK, Germany and France with some in Italy and Hungary. A reasonable, albeit indirect, measurement of the extent of publication funding can be gained from the relative geographical distribution of publications. With regard to international commercial funding for cloning research and GM, the USA is the leader with Australia, New Zealand and China also with a major interest. Within Europe, France and Italy lead with regard to animal projects. There is considerable commercial interest in cloning and GM. Some is overt, e.g. those companies that are involved in a strong public relations exercise with regard to cloning, companies based on animal bioreactors. Other commercial interests are less transparent and many scientists have association with commercial ventures. The opportunities in cloning and GM for wealth creation and improvement in human health and animal welfare should not be underestimated. Structures will require to be established to allow the flourishing of commercial entrepreneurism while providing a robust publicly funded, therefore publicly accessible, research base. Europe, including some national initiatives, can provide this environment; indeed the EU has a proven track record in enabling this environment to be established through the various Framework funding programmes that involve the academic and commercial communities. This exciting and in all likelihood lucrative area of biotechnology could provide benefits for Europe. 2.5 Main drivers for research There are three main drivers for scientists for research into cloning and GM. i. Scientific acclaim There are two aspects of this that need to be considered. First, biological research is driven by the desire to tease apart biological mechanisms and processes. At the top of the interest list, biologists seek understanding of how animals (primarily humans) develop from an egg to a living, healthy adult. Cloning and GM provide the means to pursue this quest. Secondly, a scientist’s career is based on the number, quality and impact of the scientific publications in their name. Research into the high profile area of cloning and GM provide an attractive vehicle to achieve high impact publications; the publication of ‘Dolly’ made Professor Ian Wilmut a household name. ii. Commercial gain The promise of commercial exploitation of this technology provides the driver for financial support of research. With respect to cloning, while the commercial interest expands the possibility of return on investment in cloning, in parallel there is an ever-decreasing interest in supporting academic development of the technology as it becomes more routine within commercial companies. The same can not be said for GM, with or without cloning, were there is an increasing need for, and therefore commercial support of, technology development. iii. The promise of providing solutions for human betterment. Finally underlying most individuals, scientist or not, is the desire for human betterment. 21 SECTION 3: OVERVIEW OF COMMERCIALISATION ACTIVITIES WORLDWIDE 3.1 Introduction This section aggregates original data and publicly available information of commercial activities worldwide in animal cloning and/or genetic modification. The information has been collated and presented in the form of a potential pipeline of products expected to arrive in the market in the next 5 years, next 5-10 years and after 10 years. Application of GM, cloning and both GM and cloning technologies to the following sectors are considered: food production, molecular pharming, xenotransplantation, pets, sporting animals and endangered species. 3.2 Methodology Original data for this study were collected by interviews and questionnaire. Questionnaires were sent to approximately 50 organisations, only three were returned completed despite repeated prompts. The questionnaire is reproduced in Appendix 3. The basis for selection of the interviewees was: to cover the range of application sectors, provide geographical spread, cover the technology combinations included in the survey and the ability of the interviewees to give a balanced, realistic analysis of the prospects for application of these technologies to these sectors. Interviewees were based in USA, Canada, Australia, Argentina, France and UK. Twenty six interviews were requested and 15 were successfully completed. Three of these interviews were face-to-face the rest were telephone interviews. Three of those interviewed work in senior management or research positions in public institutions the rest hold a range of senior positions in private organisations, including research directors or CEOs. Overall, the level of co-operation in the survey was not good, reflecting a similar experience with a previous EC research project ‘Mammalian Cloning in Europe: Prospects and Public Policy” (Martin et al., 2000). In particular, we experienced significant difficulty collecting information on commercialisation activity in the Far East. To assist in understanding publicly available information in the Far East, native speakers of Japanese, Korean and Chinese were employed to survey the information available from these countries via the Internet. Several factors may have influenced this low response rate: reluctance to divulge commercially-sensitive information a number of companies we identified either did not exist any more or had divested their cloning/GM activities several companies were collaborating on the same project and have been counted as separate companies although only one of them is commercializing the technology and therefore able to answer the questions we posed; the EU is considered a low priority for a number of the companies commercializing this technology; the controversial nature of the work engendering a general caution and apprehension about revealing any information about the activities for fear of bad publicity even though assurances about confidentiality were given and general uncertainty about the motives behind the survey. Therefore, most of the information in this report was collected from a survey of literature, websites and other publicly available sources. This is a rapidly developing area of technology and every effort has been made to ensure that the information presented is accurate. However, it should be stressed that this study is very much a snapshot in time. Many of the companies involved in GM and cloning developments in animals are small companies and they operate in an area of significant commercial and regulatory risk. 22 The proposed pipeline of potential products is based on the publicly available information on the plans of the companies concerned, responses during interviews, reported positions of relevant regulators and the opinions of the survey team in the light of the collated information. This is therefore necessarily a ‘best-guess’ based on the information available. Since significant weight was given to the views of those directly involved in the development the pipeline presented is more likely to be optimistic rather than pessimistic. 3.3 Inventory of the companies active in the GM and/or cloned animal sector Based on a survey of web sites and literature plus 15 interviews and 3 questionnaires we found there are 35 companies worldwide involved in producing GM animals, cloned animals or both GM and cloned animals (parent companies are listed below but not included in the total). Of these, 63% are in N. America, 14% in Europe and 11% in Asia ( the figure for Asia may be an underestimate since it was very difficult to obtain information). By sector the distribution of companies is food production 15%, pharming 40%, xenotransplantation 10%, pet 12.5%, sporting 5%, endangered 10% and other 7.5%, 5 companies are active in more than one sector. Only products from GM, GM and cloned or cloned animals are considered in Table 4. Several of the companies have a portfolio of other products. A start-up was defined as any small company established from 2001, although it was not possible to determine when some companies formed. Table 4: Inventory of companies active in the GM and/or cloned animal sector Sector Company Activity Food producti on Viagen/Exet C er Life Sciences/Pr olinia Product on market Product awaiting regulatory approval Show cattle Cloned pig semen A/F Protein GM Canada Inc./AQUA Bounty Technologie s Inc Molecul ar GM salmon Product in Start-up developme SME nt Large GM fish Geograp hy (based on R&D) SME USA SME Canada Celentis Ltd/Clone International / C Cloned ? beef and dairy cattle Australia /New Zealand Cyagra C Cloned SME beef and dairy cattle USA Yangling Keyuan Cloning Ltd. C ? ? China MaRS Landing GM SME Canada AquaGene LLC GM ? ? GM pig Factor VII SME in tilapia 23 USA Sector Company Activity pharmin g AviGenics Inc GM Bio S.A. Product on market Product awaiting regulatory approval Sidus GM+C Product in Start-up developme SME nt Large Geograp hy (based on R&D) alpha interferon in chickens USA SME Growth SME hormone in cattle Argentin a Bioprotein Technologie s GM/GM +C Proteins SME and vaccines in rabbits France GeneWorks GM Proteins in SME chickens USA GTC Biotherapeu tics/ Genzyme Transgenics GM SME USA Antithrom bin III in goats Hematech/K GM/GM irin brewery +C Company Mono and SME/Lar polyclonal ge antibodies in cattle and mice US/Japa n Abgenix GM/GM +C Mono and Large polyclonal antibodies in mice Canada Origen Therapeutic s GM polyclonal antibodies in chickens USA Pharming NV/ ProBio GM+C C1 SME inhibitor in cattle Netherla nds TranXenoG en GM Protein in SME chicken USA Viragen GM Proteins and antibodies in chickens UK CIMAB S.A GM Recombin Large ant proteins in animal cell lines 24 SME Large Cuba Sector Company Activity Vivalis GM Product on market Product awaiting regulatory approval BioAgri Xeno Pet Endang ered species Recombin SME ant proteins in animal cell lines France Proteins in ? chickens USA GM+C Pig pancreatic islet cells Start-up Korea Alexion Pharmaceut icals Inc GM+C Pig organs ? USA Revivicor GM+C Pig organs SME USA Ximerex GM Pig organs ? USA Allerca GM Pet cats ? USA SME USA SME USA Pet cats PerPETuate C Yorktown Technologie s GM GM zebrafish ? USA TaiKong/Az oo GM GM zebrafish Large China/T aiwan Viagen/Exet C er Life Sciences/Pr olinia Rodeo bulls SME USA Cryozootec h C racehorse s ? France Cyagra C ? ? SME USA Cryozootec h C ? ? ? France EMBRAPA C Junqueira cattle Genetic C Savings and Clone Other? Geograp hy (based on R&D) MGen Bio Genetic C Savings and Clone Sporting animals Product in Start-up developme SME nt Large Evergen Cloned pets ? Brazil African wildcat C ? 25 SME Brazil ? USA Sector Company Activity Product on market Product awaiting regulatory approval Product in Start-up developme SME nt Large Geograp hy (based on R&D) Butyrylchol inesterase Start-up USA SME Canada Biotechnolo gies Inc (all of the above) PharmAthen ? e (bioterroris m) MaRS Landing GM GM pig (environmen tal impact) 3.4 Summary of products in the pipeline 3.4.1 Food production i. Products already on the market In the strict sense, consumers across the world are already eating meat and milk from cloned cattle. These are the naturally occurring clones that arise from monozygotic twin births. Twin births in the cattle are in the order of 2% of pregnancies (Fricke and Shaver, 2004) and it has been estimated that 10% of twin births are monozygotic (Chris Haley, personal communication), therefore, in the order of 0.2% of beef and milk is from naturally occurring clones. Monozygotic births are also believed to be a rare event in pigs. There are also clones that arise from the practice of embryo splitting when in vitro fertilization (IVF) is used for the dissemination of high merit genetic material in cattle. The process began in the early 1970s as a way of improving the yield of embryos and the likelihood of establishing a pregnancy, and gained wide acceptance in commercial use (Seamark, 2003). Chronologically, the next technical development was the ability to clone embryos by using undifferentiated cells from developing blastocysts or, later, from cultured embryonic stem cells, through nuclear transfer. Using cells from blastocysts, it was also possible to undertake serial cloning, making clones of clones in vitro before implantation in the recipient dam. It has been reported that these techniques have been widely adopted with over 2000 calves derived from embryo-splitting and over 200 derived from embryo nuclear transfer registered with the US Holstein Breeders Association by October 2002 (Norman et al., 2004). As far as can be ascertained there were no regulatory constraints on these animals and some of them will have entered the food chain. Anecdotally the popularity of these techniques has lessened although embryo transfer is still used especially for export of embryos between countries. Despite the natural occurrence of clones and clones derived from embryology techniques, there are many that think cloning was not a reality until the success of adult somatic cell nuclear transfer (SCNT), or adult cloning. Technically, the 200 calves produced from embryonic cloning are also produced from somatic cells, so they are also SCNT clones and they may have entered the market in the United States. Whilst we were unable to verify any ‘approved’ commercial use of adult SCNT cloned or GM livestock in the food sector anywhere in the world, there are growing numbers of cloned livestock in private hands, especially in the USA. The use of such clones in food production 26 is not currently illegal in the USA, but is subject to a voluntary moratorium, issued by Centre for Veterinary Medicine (CVM) July 13th 2001, until FDA guidance is available. A small number of show or elite animals have been cloned by SCNT and are in the hands of private farmers/breeders. Larger numbers are in the hands of research organisations or commercial companies developing the technologies. Worldwide the number of cattle, pigs, sheep and goats produced by SCNT cloning must now be into the thousands of animals, though many of these animals will no longer be alive. There are also significant and growing numbers of GM or cloned and GM animals in research populations in various countries. Aside from a very small number of identified instances of accidental entry into the food chain (e.g. University staff taking meat home or animals going to rendering rather than incineration) there is no indication that any of these GM or adult SCNT cloned animals have or will enter the human food chain, but the possibility of small scale inadvertent (or deliberate) entry to the food chain exists. Much more likely in a short timescale is the entry into the food chain of meat or milk from the progeny of SCNT clones. In a recent press article, a US cattle breeder claims to have sold more than 500 units of semen from five male clones of a prize bull called Full Flush. The same article indicates that no-one knows for certain whether any of the meat from the progeny of these cloned bulls has entered the human food chain (Roosevelt, 2005). A Swiss company has also recently been reported to have imported semen from a US bull that is the offspring of a clone and used it to inseminate 300 cows (Swissinfo, 2005). ii. Products that may be on the market within 5 years GM livestock Fast-growing GM fish (Salmon) have been developed in N. America that are awaiting regulatory approval, principally for direct sale to fish farming markets in N. America, Asia and S. America. In the opinion of the developers, the structure and influence of the large retail supermarkets in the EU, rather than direct consumer acceptance is considered a specific barrier to uptake of this technology in the EU. Communication with regulators and production of credible risk assessments forms an integral part of the commercialisation process with both food safety and environmental safety being addressed. The benefits of this kind of technology are described as cheaper and more environmentally-friendly source of omega-3 rich fish. It is possible that approval for production of GM fish may be granted within five years. At least eight species of fish have been genetically modified for growth enhancement; these include grass carp, tilapia, rainbow trout and catfish (WHO, 2005). GM pigs developed at the University of Guelph in Canada with a novel digestive enzyme (phytase) were expected (by the developers) to be on the market within the next 5 years, but not necessarily in the EU. Reduction of the environmental impact of phosphate from pig production is the key benefit of these animals. Numerous challenges to commercialisation were described by the developers including; lack of written regulations, consumer acceptance and the time required to incorporate the technology into existing breeding schemes. The rise of regulation on environmental impact of livestock production was expected to increase demand for these GM animals. The priority markets for GM phytase pigs are North America, SE Asia, S. America and Russia. For terrestrial livestock, the general view expressed in our survey was that GM livestock would not be in commercial use before 2010, though some commentators, especially the developers of the products mentioned above, thought this possible. Cloned livestock 27 There is a widely held view among those well informed about the technology landscape, that cloned livestock (especially pigs and cattle) will be used within the food chain somewhere in the world before 2010. The expectation is that within this timescale, it would not be economic for cloned animals to be used directly for food or milk production, but that clones would be used as parent sires of slaughter generation pigs, beef cattle and possibly also milkproducing dairy cows. The main argument for the use of such cloned sires is economic. As one interviewee put it “If you save 1-2% of costs over millions of pigs the return [on investment] is certainly there.” Cloned parent males The pig industry widely uses artificial insemination (AI) and the norm is for these AI sires to be of high genetic merit. However, the number of inseminations possible from any one male is limited and the supply of the highest merit animals produced from breed improvement programmes is also limited. The number of high merit animals originating from the top of breeding programmes is simply too few to meet the need for AI sires to be used across the commercial sow population to produce slaughter generation pigs. For example, in pig production, AI sires might typically be from the top 10% of all performance-tested males in terms of overall economic merit for efficiency of production. Using clones, it should be possible to ensure that all the males used in pig AI are of the highest merit, e.g. top 1% or top 0.5%. Taking into account the fact that cloned boars would be genetically older, our own calculations (assuming one generation of genetic lag) show that there could be significant economic benefits from the use of cloned AI sires in pig production (see Appendix 2). Conservatively estimated, these benefits to the farmer are in the order of €1.2-1.5 per pig, equivalent to at least €145m per year across the EU if the technology were to be used for 50% of production. This estimate does not take into account downstream benefits for example improvements in processing efficiency. There are no technological barriers for the uptake of AI technology. The very smallest farmers maybe less likely to take up AI, because their infrequent use of this technology may result in a low proficiency. The above calculations together with comments from those interviewed indicated that for pigs, the cost of a cloned animal would need to be less that $10,000 (€8,000) for the economic case to be viable. All indications are that the actual costs charged by service providers will be less than this, probably below $5,000 (€4,000) when volumes are high enough. Pig breeding companies maintain commercial confidentiality over the prices attained for boars sold to AI studs, but considering the value of the boar to the AI stud in terms of inseminations, a realistic value would be in the order of €2000 to €3000 per boar. This means that a cloned boar is likely to cost little more than twice the cost of a conventional boar, assuming of course, that the high merit animals to be cloned do not increase markedly in value if cloning became commonplace. One cloning company sees the pig industry as its first high volume market and estimates the market potential to be a few thousand cloned boars per year within a few years of approval. This suggests a market size within the US into tens of millions of dollars per year. These are probably realistic aspirations. Our own calculations estimate the number of boars in AI studs to be in the order of 38,000 and 14,000 in the EU-25 and US respectively. Assuming these boars are replaced at 50% per year, the EU market for cloned sires to AI studs probably has an upper value in the order of €75m per year. Globally the market could be over €250m per year. In the case of dairy bulls, there is less clarity about economic prospects within the next five years. Artificial insemination is also widely used in the dairy industry, but the AI technique used generally means that a single bull can be used widely without the supply of semen becoming limiting. However, by the time that a bull is known to be of high genetic merit, he might be 5 or 6 years old. There have been cases of high merit animals dying or being injured and euthenized long before their potential productive life has expired. Discussion with dairy breeders and AI operators indicated that one use of cloning might be insurance against 28 the loss of individual animals of high merit. It would not be necessary to produce the clone as insurance, merely to store somatic cell lines, such that the animal could be cloned after its death. Viagen would put dairy bulls third on their list of expected market development after first pigs and then beef cattle. A US business called Infigen had placed significant emphasis on dairy animals before the business was closed down. Research in Australasia by AgResearch in association with Clone International has focused on the dairy bull. The clone International website lists the price of cloning a bull at AU$50,000 (just over €30,000). We understand that the market potential seen by these collaborators is not necessarily for their own Australasian market, but more the sale of cloned elite dairy bulls to other countries, especially Asia. Clone International has a non-exclusive license from Geron Corporation (owners of the ‘Dolly’ somatic cell nuclear transfer technology) to operate in the Peoples Republic of China and exclusive licenses for Australia and New Zealand. The sale price for cloned elite dairy bulls was estimated by one interviewee as AU$250,000 (€155,000). Another cloning company Cyagra, stated in 2002 that they charged €15,570 for a cloned calf. The ability to clone animals from cells taken from an animal soon after slaughter provides a particular potential advantage for the beef sector (and to a lesser extent perhaps the pig sector). Breed improvement programmes for beef cattle are based on relatively small populations of a few thousand tested animals per year and progress in the rate of breed improvement is limited by, amongst other things, the available population size. Most commercial male cattle further down the production pyramid are produced as castrates and even if extreme individual males were identified to be superior in any way, they would not be available for breeding. However, cells taken from a castrated male beef animal will, of course, produce an entire male animal when used for SCNT cloning. Carcase quality traits are very important in beef production and are highly heritable (a relatively high proportion of the variation seen is due to genetics rather than environment). More than one interviewed organisation proposed that it would be economically beneficial to identify extreme high merit animals (for carcase quality traits) at slaughter and clone entire male cattle from cells of the carcase. This animal could perhaps be the best in 10,000 or more animals rather than the animal estimated to be the best from a smaller population of live purebred animals. It would even be possible to make sure that the carcase selected for cloning was produced in the environment in which its progeny would be produced, thus ensuring the best possible match of genes and environment. However, there are significant risks in this approach: i) whilst it is known that carcase traits are highly heritable it is not clear what proportion of a given cloned animal’s merit in carcase traits will be passed on to progeny, and ii) even if the carcase traits of progeny of the clone are indeed superior, overall economic merit depends on a broader range of traits, such as fertility and growth efficiency. It may not be possible to have confidence in the overall merit of any particular cloned beef bull until he has significant numbers of progeny. Some limited research on this approach is underway in New Zealand. The studies needed to determine the potential for this approach are relatively simple, but not small scale. Until there is clarity on the ability to sell the progeny of clones into the food chain, such large scale studies are unlikely to be undertaken by industry. Some of the same arguments about selecting the very best individuals from the slaughter generation may also apply in pigs. One example, cited by interviewees, was the potential to select pigs of the very best meat quality (as can only be assessed at slaughter) for cloning to produce very high quality pig meat for those markets that pay premium prices for high quality e.g. Japan. Sheep have been cloned in New Zealand for research purposes. Rare individuals from breeding lines selected for parasite resistance/susceptibility were cloned to increase the number of sires thought to be segregating the genes responsible for variation in resistance. It 29 has been claimed that a Chinese cloning company which has successfully cloned a goat has received 2 billion yuan (€0.2 billion) worth of orders from 14 provinces and cities for cloned sheep and cattle (Chan, 2001). However from another source we have been informed that China does not have any companies commercializing cloned or GM animals. iii. Use of cloning in breed improvement It is generally considered that cloning has little place in breed improvement programmes. By definition clones produce animals of the same rather than better genetic merit. Breed improvement is a continuous process with better animals produced in each generation. This means that the ‘best’ animal for a given environment, that might be cloned, will be superseded by a ‘better’ animal within a short timescale. Cloning may provide a multiplication step downstream of breeding programmes, speeding up the dissemination of the best combinations of genes, but the animals to be cloned would likely change each generation. There may be an exception to the generalisation that clones have little value in breed improvement. Some traits such as meat quality are very difficult to predict on live animals available for selection, and where breeders wish to select for meat quality, they currently need either or both information from measurements on dead relatives of the animals available for selection, or genetic markers that predict a useful proportion of meat quality. Phenotypic selection for meat quality using information from relatives is expensive and rarely utilised. Some genetic markers for meat quality are available, but they explain a relatively small proportion of the genetic variation in quality traits. The exception comes from the previously described potential to produce clones from the carcases of recently slaughtered animals. Where breeders wish to select for improvement of carcase traits, it may make sense for some clones from dead animals to be utilised at the top of the breed improvement pyramid. SCNT cloning opens up a new option of accurately measuring meat quality on carcases and selecting cells from the best quality meat for cloning. This approach could be used to increase substantially the population size available for selection (because high merit animals for some quality traits may originate from the slaughter generation, though they are likely to be lower merit for some other traits), whilst also enhancing the accuracy of selection for difficult to measure traits. One interviewee described their own calculations relating to meat quality in pigs. They were not prepared to disclose the calculations, but indicated that there was real potential to use clones of dead pigs to enhance their capability to improve meat quality though selection. The basis of their calculations was to identify small numbers of carcases from male pigs of exceptional meat quality on the slaughter line and to produce clones from these carcases. These males would then be used at the top of the breeding pyramid to improve the genetic merit (for meat quality) of a breed or line selected for producing animals for markets where there is a premium for meat quality. If clones were to be used in this way, some meat from the surplus purebred progeny of the clones may well enter the food chain, but it could be two or more generations down the breeding pyramid that (great-) grand progeny of the clones would be the food-producing animals. A potential competing technology for selection on difficult to measure traits could be the use of cloning through embryo splitting to produce two animals of identical genotype. This would enable one animal to be extensively tested (including post slaughter measurements) whilst its live clone was retained for potential breeding use. This approach would effectively double the number of animals at the top of the breeding pyramid (though only one of each pair would need to be performance tested) and is unlikely to be financially viable. It should be noted that the potential benefits of the use of cloning in livestock production are not all economic, higher performance animals will likely be more efficient users of inputs and will produce less pollution and waste per unit output, potentially generating significant environmental benefits. 30 iv. Products that may be on the market beyond 2010 GM livestock Whilst there was general scepticism that GM terrestrial livestock would be in the food chain within five years, there was more optimism that some of the ‘better’ GM applications would be in the market within ten years and even greater optimism beyond this timescale. As one interviewee put it “I feel we will one day look back and wonder what all the fuss was about”. There was a general consensus, perhaps not surprising given the experience with GM plants, that a key driver to uptake of GM livestock would be consumer acceptability and that the first applications to progress to market should be those with clear benefits to consumers, such as enhanced nutritional quality. Applications that had benefits for the livestock (e.g. disease resistance) were also considered more likely to be acceptable than applications that were perceived to be about production efficiency. A number of research studies on GM livestock have already been completed. Notable examples are the various studies on animals with extra copies of the growth hormone gene. As far as we can determine, none of these animals are progressing towards commercial application with the exception of the GM salmon. Food applications that were identified during the survey as topics of current research included: Changing the nutritional composition of milk and meat Improving resistance to viral disease BSE resistant cattle through PrP knockout Changed milk functionality in dairy cows (casein genes) Cows with antimicrobial compounds in milk for reduced mastitis Pigs with changed milk production Pigs with novel digestive enzymes Altered sex ratios in poultry Increased breast muscle weight in broiler chickens Fish with lysozyme from other species as an antimicrobial Induced sterility in prawns to facilitate trade in improved prawn varieties that cannot then be used as broodstock by customers Sex linked muscular hypertrophy (mysostatin deletion) in cattle Modified rumen flora bacteria for protection against plant toxins Meat and milk from cloned animals Those developing cloning for the dairy industry have long held out the prospect of milk production from herds of cloned dairy cows. The main potential benefits are perceived to be economic, with cloning opening up the possibility that the highest genetic merit female animals can be multiplied and sold as embryos to dairy farmers. In this context highest merit is often taken to be the best yielding cows, but there is no reason they should not be the best cows in terms of overall merit; taking account of the need to address potential welfare problems in diary cows such as lameness or reduced fertility. Cloning also opens up the possibility of increasing the potential to exploit the advantages of heterosis by using crossbred females in milk production. Overall efficiency of milk and meat production could be improved if dairy cows were implanted with either female embryos of cloned high merit cows (purebred or crossbred) to replace the females, or male embryos of 31 (cloned) high merit beef cattle for beef production. Such a process would eliminate the production of dairy breed males that are of very low value and are often slaughtered soon after birth. However, there are significant problems to overcome before this could be a reality, with perhaps the greatest problem being the Large Offspring Syndrome seen with some embryo transfer calves. The use of herds of cloned dairy cows offers one further potential benefit. At the moment the environment provided for any cow (e.g. feed composition and management routines) are aimed at the average cow. Herds of cloned cows should enable management routines to be optimised to the genotype of the cow. However, there are also additional risks, the main one being the absence of genetic variation within the herd. This could mean that 100% of the herd may be affected by any new disease entering the herd. Published calculations Faber, D. C., et al. (2004) suggest that the potential economic return from cloned dairy cows in the United States might be approaching $1000 (€800) per cow over her lifetime. Clearly this is significantly less than the current cost of cloning and commentators suggest that the use of SCNT cloned dairy cows is unlikely to be taken up widely until the cost per cloned embryo can be offered at as little as $50 (€40) (Seamark, 2003). The first commercially available GM food products of animal origin are likely to be GM fish which may become available within the next 5 years (subject to resolution of regulatory and other issues). Subsequently food products from cloned and/or GM pigs and cattle may also become commercially available, as shown in Figure 5. Table 5 gives more detailed information on the potential future food products. 32 Figure 5: GM and cloned animals for food production in the pipeline for three different time periods Period 2005-2010 Group years 1: next 5 Semen, offspring, fish meat and derivatives from growth hormone GM salmon Semen, offspring, fish meat and derivatives from growth hormone GM trout Semen, offspring, from cloned cattle Semen, offspring from cloned pigs Period 2010-2015 Group 2: next 5 to 10yrs Semen, offspring, fish meat and derivatives from growth hormone GM carp Semen, offspring, fish meat and derivatives from growth hormone GM tilapia Semen, offspring, fish meat and derivatives from growth hormone GM catfish Semen, offspring, GM pigs, pig meat and derivatives from GM pigs Cloned cattle and milk, beef and derivatives from cloned cattle Period after 2015 Group 3: more than 10 yrs GM livestock with disease resistance traits GM livestock with altered meat and milk composition GM livestock with altered reproductive traits e.g. sterility Cloned pigs, pig meat and derivatives from cloned pigs Table 5: Description of GM and/or cloned animals for food production Description of GM and/or cloned animals Product A GM Yorkshire breed of pig producing the Semen straws, pigmeat, pigmeat bacterial enzyme phytase in the salivary glands products, and other derivatives of pigs and hence using plant phosphorus more efficiently. GM Atlantic salmon and trout with enhanced Semen straws, eggs, fish fishmeat, growth rates. Salmon carry Chinook salmon growth fishmeat products, and other hormone driven by promoter for antifreeze derivatives of fish production in ocean pout. GM trout, carp, tilapia and catfish with enhanced growth rates. Progeny of cloned elite boars Semen straws, pigmeat, pigmeat products, and other derivatives of pigs Progeny of cloned elite bulls of beef breeds of cattle Semen straws, beef and beef products, leather and other derivatives of beef production 33 Description of GM and/or cloned animals Product Progeny of cloned elite bulls of dairy breeds of cattle Semen straws milk and milk products, beef and beef products and leather at slaughter Cloned dairy cows (probably small numbers until Semen straws, milk and milk costs fall dramatically) products, beef and beef products and leather at slaughter 3.4.2 Molecular pharming Pipeline products are described in figure 6. Figure 6: GM and cloned animals for pharmaceutical production in the pipeline for three different time periods Period 2005-2010 Group 1: next 5 years human Growth hormone from GM+cloned cattle Period 2010-2015 Antibodies from GM(+cloned?) rabbits Group 2: next 5 to 10yrs human anti-thrombin from GM goats human albumin GM+cloned cattle III human c1 esterase inhibitor from GM goats human interferon alpha2b from GM chickens human fibrinogen GM cattle from human lactoferrin GM cattle from from Period after 2015 Group 3: more than 10 yrs human alpha-1 anti trypsin from GM+cloned cattle human monoclonal antibodies from GM+cloned cattle human insulin GM+cloned cattle human polyclonal antibodies from GM+cloned cattle from protein products GM poultry from human collagen from GM cattle Biopharm animals are genetically modified to include one (or more) protein coding genes from another species. These proteins can be extracted and used as drugs, biologicals, food additives or other products of commercial value for human or veterinary use. The substance is harvested and purified from the milk, blood, eggs or other tissue of the GM animal. The genetic modification can be 1) germ line, heritable modification or 2) somatic cell or 3) gene therapy. The animals act as “bioreactors” to manufacture large quantities of a protein. Harnessing the metabolic capabilities of animals to produce proteins has advantages over various other methods that are currently used for industrial production of proteins. Animal cell line fermenters have limited capacity, bacterial systems have large capacities but are limited to the production of simple non-glycosylated proteins and cannot achieve the 34 post-translational modifications to produce functional human proteins. Animal cell culture produces glycosylated proteins but at low yields. Fungal systems allow efficient production of some secreted proteins, however addition of mannose sugar residues during glycosylation can alter the properties of the protein. Addition of different sugar residues is also a problem when using plants as bioreactors. Plant bioreactors have the advantages that they do not carry pathogens that may be harmful for human health and they do not contain any similar proteins reducing the difficulties associated with producing and separating pharmacologically active proteins. Plants are emerging as a promising alternative to conventional platforms for the large-scale production of recombinant proteins. This field of research is developing rapidly and several plant-derived recombinant proteins are already in advanced clinical trials. However, the full potential of molecular farming can only be realized if we gain a fundamental understanding of biological processes regulating the production and accumulation of functional recombinant proteins in plants to ensure appropriate levels of protein production and consistency of product quality. Recent studies indicate that species- and tissue-specific factors as well as plant physiology can have a significant impact on the amount and quality of the recombinant product. It is expected that advances to overcome limitations and/or selection of appropriate species will be possible within 5-10 years (Fischer et al. 2004). Baculovirus systems can produce a wide range of proteins but have yet to be scaled up to industrial levels. Two principal methods are favoured for large-scale commercial production of recombinant proteins in GM animals, extraction from; i) milk of cattle, sheep, goats or rabbits or ii) chicken eggs. The mammary gland has evolved to produce large volumes of protein giving milk numerous advantages as a source of recombinant human protein. Proteins can be obtained from serum, but it is difficult to separate recombinant proteins from endogenous proteins, many proteins are unstable in blood and sufficient quantities of proteins cannot be harvested from serum. Some human proteins are bioactive across species and when expressed transgenically in other mammals may result in deleterious health effects to the animal. Several human recombinant therapeutic proteins are being produced in the milk of GM and cloned cattle and goats and are at various stages of clinical trials. One of those we interviewed believed there to be 50-100 “blockbuster applications” for GM and cloning where pharmaceutical products will be produced in completely contained “pharm” facilities. No products from GM animals have been approved for sale but several are in the final stages of clinical trials and therefore relatively close to market. At least one company is using GM rabbits to produce human therapeutic proteins in rabbit milk, these proteins are currently progressing through clinical trials. Rabbits are genetically closer to humans than any other dairy animals, have short generation time and are cheaper to produce and maintain that cattle or goats. In addition rabbits have been successfully cloned, but we could not find any evidence of cloning being directly applied to rabbits to produce pharmaceutical products. An alternative system to milk for manufacturing large quantities of human recombinant proteins is the chicken egg. The typical chicken egg white contains 3-4g of protein, more than half of which comes from a single gene, ovalbumin. Using the ovalbumin gene to express a recombinant protein could potentially yield up to a gram of recombinant protein per egg. On average a hen lays 252 eggs per year. Several human vaccines are currently manufactured in chicken eggs. Chicken eggs have several advantages as a system for manufacturing human recombinant proteins. The evolutionary distance between birds and mammals means that chickens do not usually recognize mammalian proteins, although they have similar post-translation processes 35 of glycosylation and phosphorylation. Chickens also have a considerably faster generation time than goats or cows. The above advantages of chickens as bioreactors also apply to using GM fish to manufacture human recombinant therapeutic proteins. There is one example of fish being used as bioreactors where GM tilapia have been produced that express human coagulation factor VII in their blood. Table 6 compares average annual milk/egg yield, yield of recombinant protein per litre of milk or egg and total annual yield of recombinant protein between cow, goat, sheep, rabbit and chicken. Table 6: Annual yields of recombinant protein from various sources Animal Average annual milk/egg Yield of recombinant Total yield yield (litres/ no.) protein/litre or egg (g) recombinant protein/year (g) Cow 7,000 2g 14000 Goat 850 4g 3400 Sheep 450 4g 1800 Rabbit 15 5g 75 Chicken 252 eggs 1g 252 of Generation intervals for these animals vary considerably, cow 140 weeks, goat 64 weeks, sheep 52 weeks, rabbit 18 weeks, chicken 18 weeks. To choose the animal system to produce each recombinant human protein in GM animals the protein yield required and cross-species bioactivity would have to be assessed on a case by case basis. Using GM animals to produce therapeutic proteins is described as economically viable. Transgenic protein production costs are low and production volumes high making the cost of producing a protein transgenically approximately one-tenth that of standard cell culture production (Jain 2004). High protein expression levels in GM livestock, concentrated raw material, and efficiency in purification make the economics of “pharming” in animals highly cost-effective. The ultimate cost of transgenic proteins is significantly lower than those produced conventionally, reducing the cost of treatment using transgenic sourced product considerably. An industry survey estimated the worldwide market for transgenic proteins in 2003 to be $2.8 billion (€2.3 billion) growing rapidly to $4.5 billion (€3.7 billion) in 2005 (Jain, 2004). Some of the products being developed to be produced by GM livestock are conventionally extracted from human plasma and already have an established market, for example insulin and fibrinogen. Table 7 describes in more detail the animals for pharmaceutical production. Table 7: Description of GM and/or cloned animals for pharmaceutical production Description of GM and/or cloned Product animals GM and cloned Jersey bull has Human been produced that carries the protein human growth hormone gene, female offspring of this animals Estimated Market Size (Beltran, 2005) Growth 36 hormone Description of GM and/or cloned Product animals Estimated Market Size (Beltran, 2005) will produce hGH in their milk. GM birds to produce Alpha interferon recombinant Alpha interferon in egg white GM rabbits Recombinant human esterase inhibitor C1 GM and cloned cattle/goats Recombinant Fibrogen human GM and cloned cattle/goats Recombinant lactoferrin human GM and cloned cattle/goats Recombinant collagen human GM and cloned cattle/goats Recombinant thrombin III GM and cloned cattle/goats Monoclonal antibodies GM and cloned cattle/goats polyclonal antibodies GM and cloned cattle/goats CD137 antibody GM and cloned cattle Recombinant Albumin GM and cloned cattle Recombinant human alpha-1 antitrypsin GM and cloned cattle Recombinant human insulin GM goats MSP-1 Protein vaccine for malaria GM tilapia Human coagulating factor VII GM pigs Human tissue plasminogen >$1 billion activator human anti- $200 million/year >$4 billion human $12 billion $150-200 million/year i. Products already on the market No products produced in GM animals were identified that are already on the market. Human antibodies produced in bacteria by phage display are on the market, HUMIRA® an antibody to TNFα produced as a collaboration between Cambridge Antibody Technology (UK) and Abbott (US) is approved as a treatment for rheumatoid arthritis in 58 countries including the EU ii. Products that may be on the market within 5 years GM livestock Between 5-10 products produced in GM animals are progressing through human clinical trials as part of the regulatory procedures required for pharmaceutical products. Two products are expected to be on the market in the EU in the next year. This field is expected to grow substantially over the next 5 to 10 years. Currently 38 out of the top 100 best selling drugs are proteins and over 700 protein drugs are in development (research director at company developing pharming products). Furthermore “pharming” may be the only method 37 available to produce the volume to satisfy demand for these protein pharmaceuticals. One interviewee said 10 approved protein drugs would take up most of the industry’s cell culture capacity. There was a general feeling that demand for pharmaceuticals produced by GM animals will increase over the next decade. Recombinant human anti-thrombin III produced in the milk of transgenic goats is undergoing Market Authorization Application review with European Medicines Evaluation Agency EMEA. Recombinant human C1 esterase inhibitor produced in milk of GM rabbits is in Phase III human clinical trials. Provided the results of the clinical trials and evaluation are positive these products are likely to be on the market in the next five years. A number of companies are commercializing production of therapeutic proteins in GM chicken eggs. Antibodies and therapeutic proteins produced this way are expected to be on the market in the next 5 years. One of our respondents predicted that over the next 10 – 15 years the patent life of products may be extended by manufacturing them in GM chickens as opposed to bacterial or mammalian cell culture. It is possible, that manufacturing by avian transgenics may confer certain advantages (for example increased pharmacological activity) onto a protein produced using it and therefore create a new IP position for that product, but this possibility remains untested. Regulatory approval of products produced by this novel method is seen as the principal hurdle. Cloned livestock GM cattle that produce the following recombinant human proteins in their milk at commercially viable levels have been generated: growth hormone, fibrinogen lactoferrin and collagen. Cloning is applied in “pharming” to multiply up GM animals. Using cloning in this way has the following advantages: all animals produced are GM all animals produced are all female multiple transgenes can be induced “mini” herds are created rather than single founders development time is reduced herd expansion is flexible. On the assumption that these GM animals will be classified as unfit for human consumption slaughter animals will be disposed of by incineration. As long as the animals are kept in strictly controlled containment facilities and are disposed of properly, the question of products and derivatives should never arise. If derivatives were permitted to enter the human food chain these will include; semen straws, milk and milk products, beef and beef products, leather at slaughter, poultry meat, eggs, egg products and other derivatives of eggs, poultry meat products, and other derivatives of poultry, fish, fish meat, fish meat products, and other derivatives of fish. iii. Products that may be on the market beyond 2010 Recombinant human mono- and polyclonal antibodies produced by GM livestock have huge therapeutic potential for a wide spectrum of clinical indications. GM and cloned cattle have been produced that express a human chromosome fragment coding for the whole range of human antibodies. The GM offspring from these GM cloned animals are currently available. Mono- and polyclonal antibodies produced by GM and cloned livestock are not expected to be on the market for 5 years. One goal of those commercializing this technology is production of several different targeted polyclonal antibodies in the same animal. Monoclonal antibodies from GM cattle for therapeutic use for specific disease indications are not expected for 10+ years. The priority geographical markets for the antibody products are USA, 38 Japan and Asia and EU. Several technological barriers for this application in cattle were highlighted: long gestation period in cattle, cloning efficiency and numbers of antibodies produced. Two of the significant barriers identified for this application of GM are the time taken to get the product to market and for the regulatory authorities to “get used to the idea” of pharmaceutical products from GM animals. 3.4.3 Xenotransplantation Xenotransplantation is the transplantation of organs or cells from one species to another. Human to human transplantation has the following problems which could be solved by xenotransplantation: scarcity of donor organs and need for immunosuppression with adverse effects of drugs used for this purpose. Pigs are considered the preferred candidate for xenotransplantation because of physiological compatibility and breeding characteristics. Large numbers of pathogen free pigs can be raised to provide organs for transplantation into humans. A major problem with xenotransplantation is hyperacute rejection which appears to be mediated by regulators of complement activation that are species specific. One approach to prevent hyperacute rejection is production of GM pigs that express human regulators of complement activation. Some of the work in the xenotransplantation field is taking place in public and privately funded medical facilities. Two countries active in this field of research are USA and Korea. Xenotransplantation with non GM pig cells is available in Mexico and China (Bioethics New Zealand , 2005). In 1990’s New Zealand clinical trials were performed implanting non-GM pig islet cells to produce insulin in diabetes patients, these have been stopped under a moratorium which has been extended to the end of 2006. The Korean government is investing large amounts in the xenotransplantation field (60.5 billion won - €0.05 billion) over the next 10 years with the aim to have a litter of cloned GM pigs to supply organs for human transplantation by 2010. At least one Korean company has been identified which is commercialising GM and cloned pigs as organ donors for humans. There is a chronic shortage of organ donors for patients waiting for transplants. Based on the identification of a small number of commercial companies developing xenotransplantation of organs from GM animals this area appears to be more advanced towards commercialisation than in vitro GM animal cell therapy and tissue engineering, where we were unable to identify any commercial activity. Currently, approximately 300,000 persons worldwide are awaiting donor organs. The demand for donor organs has doubled since 1988 and is increasing at a rate of 15% per year. The value of a transgenic organ is approximately $15,000 to $40,000 (€12,000- 33,000) (Jain, 2004) with a total worldwide market estimated in 2005 at $5 billion (€4 billion). Table 8 gives a description of the animals for xenotransplantation. Table 8: Description of GM and/or cloned animals for xenotransplantation Description of cloned animals GM and/or Product By-products α-Galactoside GM and cloned Kidneys, liver, heart, Cull animals and their pigs pancreas, organs/cells derivatives e.g. meat and bone meal if rendered, ash if incinerated Aside from the organs and cells produced by the GM and GM and cloned pigs there will also be derivatives from these animals. On the assumption that these GM animals will be classified as unfit for human consumption, slaughtered animals will be disposed of by incineration. As long as the animals are kept in strictly controlled containment facilities and 39 are disposed of properly the products and derivatives should never arise. If derivatives were permitted to enter the human food chain these derivatives would include meat and bone meal if rendered, ash if incinerated. Hyperacute rejection is the first of several immune rejection mechanisms to be overcome before xenotransplants to humans can be successful. Firstly, an antibody response would be expected, less vigorous than hyperacute rejection but similar to the response seen in humanto-human transplants. Second, there will be a cell-mediated response, in which T-cells attack the xenograft. Finally, xenografts, like human transplants, may be susceptible to chronic rejection. Chronic rejection is a slow process that happens over months or years and leads to damage to the blood vessels of the transplant. i. Products already on the market We have not identified any examples of xenotransplantation products from GM or cloned livestock which are currently on the market. ii. Products that may be on the market beyond 2015 The most optimistic proponents of xenotransplantation think that it will be another 10 years or so before GM pig organ transplantation will be available, it seems likely that this will first become available in Asia. The pancreas or pancreatic cells from a GM pig could be the first to be available commercially followed by kidneys, liver and heart. 3.4.4 Pet sector Table 9 summarises the application of GM and cloning to the pet sector. Table 9: Description of GM and/or cloned animals for pets Description of GM and/or cloned Product animals On market Fluorescent Protein GM zebrafish GM pet zebrafish, eggs Yes Cloned cats Cloned pet cats Yes Cloned dogs Cloned pet dogs In development GM cats with reduced expression of Cats with reduced In development glycoprotein Fel d 1 allergenicity for humans i. Products already on the market The US company Genetics Savings and Clone offer pet cat cloning at $50,000 per animal and they have cloned 3 pet cats commercially. GM ornamental fish have been on the market since late 2003 in the United States. The GM Zebra Danio fish (Brachydanio rerio), with the trade name GloFish™ are sold to ornamental fish wholesalers by Yorktown Technologies based in Austin, Texas. The fish fluoresce because they express transgenic red fluorescent protein. Yellow and green varieties are reported to be in development. The company did not wish to disclose sales volumes or prices, but the suggested retail price for the fish on the company’s website is $5.00. They reported current work on sterilization of the fish. This might improve their chances of marketing the fish outside the US. Both the FDA and the EPA (Environmental Protection Agency) decided that the fish fell outside their regulatory remit as neither a food nor a threat to the US environment. The state of California has banned the sale of GloFish. It is difficult to estimate the potential market size, but Yorktown report that some 200 million conventional zebra fish have been sold in the US. 40 Fluorescent GM zebrafish are also being sold by a subsidiary of Taikong a aquaculture business based in Taiwan. Taikong has produced 10 different GM fish, 4 of which are in mass production and they claim their output is 200,000 fish per month. ii. Products that may be on the market within 5 years The physiology of canines makes dog cloning technically more challenging but the dog has now been cloned by scientists in Korea and Genetics Savings and Clone intend to offer commercial dog cloning within 5 years. The US company Allerca is developing hypoallergenic GM pet cats with reduced expression of glycoprotein Fel d 1. It is claimed that this genetic modification will reduce the allergic reactions of humans. The price Allerca are quoting for when these animals are available is $3,500 (€3,000). 3.4.5 Sporting animals Cloning is being applied commercially on a small scale to rodeo bulls and sport horses. White-tailed deer have been cloned in Texas because of the commercial value of sportshooting of deer. Table 10 summarises the products available. Table 10: Description of GM and/or cloned animals for sporting purposes Description of GM and/or cloned animals Product Cloned rodeo bulls Semen, offspring Cloned horses Semen, offspring Cryozootech is a French company offering cloning of sport horses and endangered equids. Their priority markets are the EU, Middle East, USA, South America. One of the companies involved in the commercialisation of cloned livestock has cloned rodeo bulls and is evaluating the market potential for the cloning of horses. i. Products already on the market Two cloned horses have already been sold to private individuals. An unknown number of cloned rodeo bulls have also been produced for private individuals. ii. Products that may be on the market within the next 10 and 10+ years One of our interviewees who is operating in this field expected horse champions to be cloned for use as stallions within the next 5 years and semen from these to be on the market within the next 5-10 years. Cloned female champions were also expected to be available in this longer time frame, followed by offspring of cloned horses in 10+ years. 3.4.6 Endangered species The main focus of interest in endangered species is the use of cloning to assist reproduction and save species from extinction where very few individuals remain. A large proportion of the work on cloning of endangered species has been done either in publicly funded organizations especially zoos, or as public/private collaborations. Several “frozen zoos” around the world have biobanked cells from endangered species stored in liquid nitrogen. i. Products already on the market A gaur (endangered cattle species) was Cell Technology (whose current animal applications of stem cells). A number including mouflon, banteng and African successfully cloned by the US company Advanced cloning activity is limited to models for biomedical of other species have been successfully cloned wildcat. Brazil’s Agricultural Research Corporation 41 (EMBRAPA) has successfully cloned the endangered Junqueira cattle and is working on applying the technology to sheep, pigs and horses. ii. Products that may be on the market within next 10 and 10+ years The Chinese Academy of Science’s Institute of Zoology has been working towards cloning the highly endangered giant panda. The Chinese team has created a panda embryo in an egg cell from another species and implanted it in the uterus of a surrogate mother, also of a different species. The final challenge facing them is to achieve development of the embryo in the womb of another species. There are a number of limiting factors for cloning of endangered species, principal amongst them being a source of donor oocytes and the unknown basic reproductive biology to facilitate reliably oocyte maturation. In some cases the use of cloning by embryo splitting may be a viable alternative to SCNT cloning for increasing the numbers of endangered species In the 1990s, AgResearch in New Zealand cloned the last remaining female of the cattle ‘native’ to Enderby Island. Three cloned heifers were inseminated from the one remaining bull and with stored semen from dead bulls to produce three heifer calves and resurrect the breed. 3.4.7 Other possible applications i. Products that may be on the market beyond 5 years GM fish are under development for environmental biomonitoring for example for detecting environmental mutagens. It is unlikely that such technology will be widely used within the next five years. CSIRO in Australia are researching the use of GM techniques to produce sterile males of feral species (for example GM carp) for purposes of population control. In the GM carp an enzyme which turns the fish female is blocked using antisense technology (New Scientist, 2002). Debate continues as to whether these GM carp should be released into the environment. However, it is unlikely that such technology will be widely used within the next five years and may never be part of a commercial business. A number of participants in our survey indicated that somatic cell nuclear transfer provided a very good method for facilitating the safe international trade in livestock breeds (or other species). They considered the technique allowed the transfer of cell lines/tissue and provided a higher degree of biosecurity than the transport of livestock, embryos or gametes. One company appears to be commercialising butyrylcholinesterase and an antibody as countermeasures to bioterrorism. These products may be produced in GM and potentially cloned animals although it was not possible to confirm this. The research programme to produce spider silk in GM goats has apparently been discontinued. 3.5 Comparison of economic structure of industry sectors 3.5.1 Food production The economic structure of the sector is a mixture of SME’s and larger companies with cloning and or GM expertise. Both SME’s and larger companies are collaborating formally and informally with large food production companies. With cloning technology there is no difference in the potential for use by small versus large-scale farmers because the technology is applied not by the farmer but by the breeding or AI company. GM technology requires considerable extra paperwork concerning traceability and increased requirements for containment which make it more difficult for small farmers to apply. GM technology also raises issues surrounding marketing of products. In the EU small farmers are often members of co-operatives which may deal with these issues centrally. 42 3.5.2 Molecular pharming The sector is dominated by SME’s with cloning and/or GM expertise and their collaborations with larger pharmaceutical or in one case a brewing company. These larger companies have large R&D portfolios in which the investment in cloning and GM forms a small part. Financial viability in this sector appears to be a problem, linked undoubtedly to the long time-frame for getting products to market. It seems that some of the earliest products to market in this sector will be those that already have an established market, and this will have significant implications for the sustainability of these businesses. 3.5.3 Xenotransplantation This sector is dominated by SME’s and start-ups with cloning and/or GM expertise. Some of these are collaborating both formally and informally with large medical research centres and hospitals. Financial viability in this sector also appears to be a problem linked undoubtedly to the long time-frame for getting products to market. Some of the large global pharmaceutical companies did have some research activity in this sector until recently, but they have divested this to medical centres. Several of the start-ups in this sector appear to be spin-outs from universities or research centres. 3.5.4 Pet sector Apart from the multinational Taikong, the pet sector is made up of SME’s which all have specialist expertise in cloning and/or GM. At least one of these SME’s is a private company financed by a single individual. 3.5.5 Sporting animals Only two companies were identified cloning sport animals. The scale of activity is very small but high value and apparently unregulated. 3.5.6 Endangered species As already described most of the activity in this sector is in publicly funded research organizations especially zoos or in collaborations between these and specialist SME’s. Government funding is supporting several of the endangered species cloning programmes. 43 SECTION 4 TECHNO-ECONOMIC BARRIERS TO GM AND CLONING 4.1 Main technical barriers One of the most prominent technical barriers to the use of GM livestock in food production is that of introgression problems relating to genetic lag. The problem is that the genetic change, either through addition of a transgene in a GM animal or through cloning of a specific genotype must then be integrated (introgressed) back into the breeding herd. Selection of the breeding herd, on a multiplicity of traits, is occurring on a continual basis. Therefore, the most desirable animal to-day will be overtaken by animals born after it. Thus, the cloned and GM change must be of sufficient magnitude to better these continuous incremental improvements. The time taken to introgress the GM/cloned genotype into the elite population will depend on transgene effects, initial genetic lag, the risk of inbreeding depression and structure of the commercial population. It has been predicted that transgene effects of 3-10% of overall economic merit of the animal will be required to compete genetically with existing genetic improvement programmes. It is difficult to see what engineered change will generate this. Thus it is unlikely at the moment that the combination of these technologies will be of widespread use in an agricultural context. The high fecundity and general breeding strategy of fish makes introgression of GM into fish production more feasible. Furthermore, the improvement in growth of GM growth hormone fish is a step change which surpasses the improvement that could be made through of conventional selection in one or potentially more generations. The limitation in fish is that no method for gene targeting is possible. Gene targeting is possible in livestock through cloning and GM. In birds, there is also no gene targeting method available. In addition, in birds a method that enables the delivery of large gene fragments remains to be developed. These limitations are being investigated and current approaches, e.g. using recombinase systems, are likely to delivery useful tools within 5 years. The foremost challenges for cloning animals are to increase the efficiency and to overcome fully Large Offspring Syndrome (LOS). Much progress has been achieved in both, and some commercial sources question the need for further efficiency improvements. One line of research is attempting to simplify manipulation methods, e.g. hand made cloning, which in turn may prelude the automation of the procedure (within 5 years). It is predicted that improvements in these areas could come from anywhere in the world, with the Far East, USA and Europe currently leading the way. Improvements in the actual methodology (Dolly technique) will probably lead to some substantial advances. Getting transplantable embryos and a higher rate of initiated pregnancies is now not the main problem. The technique has progressed in terms of yield of blastocysts from reconstructed embryos. Developmental arrest at the foetal stage remains the key point questioning the basic issue of the link between robustness (of a complex living system) and time (reprogramming). A considerable amount of basic research needs to be carried out before we can expect improvement (within 5 years) and epigenetics is obviously an important part of this endeavour. Through the use of nuclear transfer gene targeting, genetic modification in animals has been accomplished. However, due to the cost involved this method is restricted to high-value projects by organisations that have substantial financial input. This limits its use in the academic world. Any technological advance which reduces the cost, which will reflect a reduction in the number of animals used and hence has positive welfare implications, will broaden the use of GM and cloning (5-10 years). New methods based on viral vectors can contribute (within 5 years) but are themselves limited. We can anticipate the use of innovative approaches, for example based on recombinases, to be the next advance in GM (within 5 years). One key goal is a “clean” genetic change that allows specific DNA 44 sequences to be altered without the remaining presence of selection marker genes or other vector sequences. The expectation is that these advances could be generated anywhere in the world. Table 11: Key research priorities in cloning and GM Cloning and GM research priorities Significant progress anticipated: Overcome LOS within 5 years Use as basic research tool within 5 years Develop novel strategies gene manipulation within 5 years Derive livestock ES cells within 5-10 years There is however, general agreement within the scientific community that the main barrier to research is public opinion. Public opinion reflects: impact of GM crops on consumer acceptance small versus large farming political forces political leadership exhibiting suspicion of cloning and GM influence of pressure groups, including NGOs and those that have conflicting economic interests, e.g. the organic farming community uncertainty in the scientific community on the best methods to use lack of commercial ventures using cloning or GM that have products for sale, use on the farm or within the clinic expensive research due to the initial investment needed to set up lab/train people risk of escape of cloned/GM organisms . This is likely to be more of a risk for fish than terrestrial mammals. In turn these affect political will and hence public funding support for cloning and GM. Thus there are only a few groups within a given country that pursue research into cloning and GM. This then results in little internal competition for funding that in turn results in little funding allocated to this topic. 4.2 Main barriers to commercialisation 4.2.1 Cloning Two differing views were expressed regarding the techno-economic barriers to cloning of food animals. The companies and some researchers believed there were few technical or economic barriers. The technology works and has been sufficiently improved in efficiency to be economically viable. One company described the efficiency as now very similar to IVF. Two research groups said that one of the reasons they had reduced active research on cloning was because it was now a technology that could be developed for commercial use by industry. Conversely, some of the same researchers and others expressed concern that efficiency was still rather low, that there were significant welfare issues with the process of cloning and that there was still much to learn about the long-term viability of clones and the impact of abnormal epigenetic reprogramming. Several research groups around the world are using cloning of livestock as a means to study epigenetic processes. In pet cloning the particular reproductive physiology of the dog is a barrier to applying cloning technology. This is also a barrier for cloning of endangered species where their unknown 45 reproductive physiology makes it difficult to provide a reliable oocyte maturation environment. A source of donor oocytes from endangered species is also a considerable barrier to the application of cloning. Where clones are to be used as sires of the productive livestock generation, the total numbers of clones will be relatively small. It will obviously be necessary for these animals to be fertile and sufficiently fit to have a productive life in an AI stud. If there are problems of animals with reduced fitness, these will likely be identified early in life. Problems that develop later in life might be more difficult to detect. There is significant commercial interest within companies to use cloning in pig production. The reason for the greater interest in cloning from the pig production than cattle production is because the number of doses of semen from a boar at AI is limiting whereas this is not the case for a bull. Cloning offers the potential to increase substantially the number of inseminations possible from a high merit boar by copying him. Issues of genetic lag are not important for cloned but not genetically modified animals as there is no need to introgress new genes into an entire population. There are also risk management issues with the widespread use of clones. Inherited diseases, for example, could be propagated by the widespread use of a carrier clone and, consequently good surveillance procedures will be important. The economic barrier to entry into animal cloning is low. The necessary capital costs are low and a service company could operate a cloning business with a relatively small, though highly skilled workforce. It is not yet clear what the costs of obtaining regulatory approval will be, but it is a reasonable assumption that these costs will be substantially lower than for GM livestock. The costs for cloning are lower compared with GM because with cloning toxicity testing is not required, the risk assessments have been undertaken and approval is required for the process rather than for each individual product. Each new GM product will require independent approval. In addition, with cloning it takes less time to generate the numbers of animals required for testing in comparison with conventional breeding of GM animals. Another factor reducing costs for animal cloning is that there are currently no special containment regulations for clones so regulatory approval for releases to the environment are not necessary. One clear message from the survey undertaken is that the main barrier to the uptake of cloned sires in the United States is ‘approval’ from the Food and Drug Administration (FDA). As part of the ongoing process undertaken by the FDA to consider publicly animals cloning on October 31, 2003, the FDA released a draft executive summary of its assessment of food and health aspects of animal cloning (FDA News, October 31, 2003). This draft risk assessment evaluated the effects of cloning on the health and safety of food products from cloned animals. The report concluded that products from the progeny of healthy clones are likely to be as safe as those from conventional animals. Final guidance from FDA is now long awaited. In at least one case, the type of study that might be needed for FDA ‘approval’, comparing the progeny of clones and control animals, is already underway. 4.2.2 GM Few of the respondents to our questionnaire highlighted barriers of a technical nature to the commercialisation of GM animals. The barriers they described were linked to regulatory approval and consumer/food retailer acceptance. One of the technological barriers facing commercialisation of GM fish is sterilization efficiency, currently below 100%. This is important if the fish are to be farmed in sea cages. The structure and influence of the large retail supermarkets in the EU rather than direct consumer acceptance was considered a specific barrier to uptake of GM livestock in the EU by one respondent. Application of GM technology in the pharming sector has the following technical barriers: long gestation period in cattle, low cloning efficiency and limited number of antibodies that can be produced. It is also a technical challenge to produce several different polyclonal 46 antibodies in the same animal. These also constitute barriers for commercialisation. One respondent indicated that in pharming every new pharmaceutical product produced in GM livestock has its own unique technical barriers. Regulatory approval of pharmaceutical products produced by GM animals is seen as the principle hurdle followed by the time to get the product to market. Each sector where GM and cloning are being applied presents different ethical and social challenges. A barrier to attracting venture capital to start-up businesses working in this area of science is the controversial nature of the work. Furthermore, the IP situation for cloning technology is complicated and, in an endeavour to simplify this, some of the larger companies have formed separate holding companies which own and manage the IP. The relevant Intellectual Property in both the GM and ‘pharming’ sectors is in a relatively small number of hands. This limits the potential for many new companies to enter the sector in the medium term. 47 SECTION 5 COMPARISON OF EU WITH NON-EU COMPETITORS 5.1 Current research activities in the EU Academic research into cloning and GM has followed three themes. First the technology itself with two research goals: application to an ever increasing range of animal species and testing of technical improvements. Secondly, the application of cloning and GM to increase our understanding of the molecular events underlying biological process in animals. Lastly, to demonstrate what this technology can be used for. With regard to the last point there has been a raft of proposed uses, largely demonstrated in the mouse, with some demonstrated in livestock. The majority of these have remained in the academic area with only a few currently being developed commercially, most notably the use of cloning to reproduce selected individual animals (endangered, pet or valuable breeding stock), the generation of animal organ donors for xenotransplantation and the use of animals as bioreactors. Currently, the majority of research in cloning and GM within Europe concerns improving the methodology used in these technologies. In parallel a few commercial ventures have been established that use this technology. 5.1.1 Summary of EU position Cloning and GM research within Europe are mainly at a national level. Across Europe it is fragmented. Not all member countries have an active research base in cloning and GM of livestock (many use GM mice for scientific research). Within a given country the general rule is for one group to have expertise in both cloning and GM technology. Within European groups there is considerable cloning and GM expertise and capability; (currently) at least equal to the rest of the world. At the moment, Europe has the lead with respect to GM birds. 5.1.2 Summary of international perspective Research into cloning and GM outside of Europe is largely restricted to the USA and Australasia. There is more commercial support for cloning and GM out with Europe than within it. The greatest contracts is with North America where there are; i) a higher proportion of the commercial investments in truly commercial companies and, ii) there are commercial farming companies keen to see the approval of the use of clones as sires of commercial meat animals. The USA is moving towards a more centralised approach through initiatives such as the National Swine Resource Centre (a one-stop site for GM, cloning and embryology in pigs). Research in the Far East – specifically China, Japan and Korea – is exploding in the area of cloning and GM. If the increase in effort is maintained, within a few years the majority of research into cloning and GM will be performed in this region. The majority of GM fish effort is in the Far East and USA. 5.2 Current commercialisation activities in the EU Within the EU France is the country which seems to be most actively commercialising GM and cloned animals. French companies are applying GM and cloning to pharming, sporting 48 and endangered animals sectors. The Netherlands and UK each have one company active in the pharming sector. 5.3 Non-EU countries closest to commercialising GM and cloned animals In terms of number of companies and scale of activity, the US is closest to commercialising the products of GM and cloned animals. Canada is second but with significantly less activity than the US. From the rest of the non-EU countries listed we could identify only one company in each commercialising products from GM and cloned animals. Countries listed in order of total number of cloning/GM companies USA Canada China, Taiwan, Australia, New Zealand, Argentina, Japan, Korea, Cuba, Brazil We experienced significant difficulty collecting information on the commercialisation activity in the Far East. The number of companies in USA and Canada reflects the strong entrepreneurial culture, availability of early stage funding and strength of the public sector research base. Non-EU countries are applying GM and cloning to a broad spectrum of possible application sectors. The most significant difference between EU and non-EU countries is the focus of non-EU countries on the application of GM and cloning to food production. The impression given in USA and Canada was of companies poised and ready for the regulatory “green light” at which point some of these products will be released to the food production market. In contrast the companies in EU countries are applying GM and cloning principally to pharming but also to sporting or endangered animals. 49 SECTION 6 REFERENCES 6.1 References Agrifood News Archive http://www.afaa.com.au/news/news-1380.asp Bioethics New Zealand, 2005 http://www.bioethics.org.nz/publications/bioethics-progressreport-may05/html/page6.html Beltran, D. (2005) Animal ‘Pharming’ market survey report by Genesis Faraday for DTI, UK Campbell K.H., Loi P., Otaegui P.J., Wilmut I. (1996) Cell cycle co-ordination in embryo cloning by nuclear transfer. Reviews of Reproduction 1,40-46 Campbell K.H., McWhir J., Ritchie W.A., Wilmut I. (1996) Sheep cloned by nuclear transfer from a cultured cell line. Nature 380, 64-66 Chan C. 2001. ‘Farmers leap forward with cloned livestock order’, South China Morning Post, 22 May 2001 Clark A.J. and Whitelaw C.B.A. (2003) A future for transgenic livestock. Nature Review Genetics 4, 825-833 Davis, S. (2005) Animal Cloning – Applications and commercial issues. Presentation at the workshop Animal Cloning: Technology, Applications and Ethics European Commission (2004) Report from the Commission to the European Parliament, the Council and the European Economic and Social Committee. Life Sciences and Biotechnology – A Strategy for Europe. Second Progress Report and Future Orientations. 7.4.2004.COM(2004)250 final Faber, D. C., Ferre, L.B., Metzger, J., Robl, J.M. and Kasinathan, P. (2004) Agro-economic impact of cattle cloning. Cloning and Stem Cells. 6 198-207 FDA News, October 31, 2003, U.S. Food and Drug Administration Center for Veterinary Medicine. (2003) Animal cloning: A risk assessment. Draft executive summary http://www.fda.gov/bbs/topics/NEWS/2003/NEW00968.html Fischer R., Stoger E., Schillberg S., Christou P. and Twyman R.M. (2004) Plant-based production of biopharmaceuticals. Curr Opin Plant Biol. 7: 152-158. Fricke and Shaver, (2004) Managing Reproductive Disorders in Dairy http://www.wisc.edu/dysci/uwex/rep_phys/pubs/MngReproDisorders.pdf Cows, Gordon J.W., Scangos G.A., Plotkin D.J., Barbosa J.A., Ruddle F.H. (1980) Genetic transformation of mouse embryos by microinjection of purified DNA. Proceedings of the National Academy of Science USA 77, 7380-7384 Hammer R.E., Pursel V.G., Rexroad C.E. Jr, Wall R.J., Bolt D.J., Ebert K.M., Palmiter R.D., Brinster R.L.. (1985) Production of transgenic rabbits, sheep and pigs by microinjection. Nature 315, 680-683 Jain, K. K. 2004. Animal biotechnology; technologies, companies and markets. Jain Pharmabiotech. Basel, Switzerland Kaneko T, Moisyadi S, Suganuma R, Hohn B, Yanagimachi R, Pelczar P. (2005) Recombinase-mediated mouse transgenesis by intracytoplasmic sperm injection. Theriogenology 64, 1704-15 Kuroiwa Y., Kasinathan P., Matsushita H., Sathiyaselan J., Sullivan E.J., Kakitani M., Tomizuka K., Ishida I., Robl J.M. (2004) Sequential targeting of the genes encoding immunoglobulin-mu and prion protein in cattle. Nature Genetics 36, 775-780 50 Loi P., Ptak G., Barboni B., Fulka J. Jr, Cappai P., Clinton M. (2001) Genetic rescue of an endangered mammal by cross-species nuclear transfer using post-mortem somatic cells. Nature Biotechnology 19, 962-964 Lonergan P., Rizos D., Gutierrez-Adan A., Fair T. and Boland M.P. (2003) Effect of culture environment on embryo quality and gene expression - experience from animal studies. Reprod. Biomed Online 7, 657-663. Love J., Gribbin C., Mather C., Sang H.. (1994) Transgenic birds by DNA microinjection. Biotechnology (NY) 12, 60-63 Martin, P.A., Crowther, S., Watson, P., Frost, R., Benedictus, J., Enzing, C. (2000) Mammalian Cloning in Europe: Prospects and Public policy. Final Project Report. McCreath K.J., Howcroft J., Campbell K.H., Colman A., Schnieke A.E., Kind A.J. (2000) Production of gene-targeted sheep by nuclear transfer from cultured somatic cells. Nature 405, 1066-1069 McGrew M.J., Sherman A., Ellard F.M., Lillico S.G., Gilhooley H.J., Kingsman A.J., Mitrophanous K.A., Sang H. (2004) Efficient production of germline transgenic chickens using lentiviral vectors. EMBO Reports 5, 728-733 New Scientist, 2002 http://www.newscientist.com/article.ns?id=dn2255 Norman, H. D. et al., (2004) Performance of Holstein Clones in the United States. J. Dairy Science 87:729-738 Ristevski S. (2005) Making better transgenic models: conditional, temporal, and spatial approaches. Molecular Biotechnology 29, 153-63 Roosevelt, M. 2005. “Would you eat a clone?” Time Magazine, 13 June, 2005. Schnieke A.E., Kind A.J., Ritchie W.A., Mycock K., Scott A.R., Ritchie M., Wilmut I., Colman A., Campbell K.H. (1997) Human factor IX transgenic sheep produced by transfer of nuclei from transfected fetal fibroblasts. Science 278, 2130-2133. Seamark, R. F. March 2003. Review on the current status of the extent and use of cloning in animal production in Australia and New Zealand. Sullivan E.J., Kasinathan S., Kasinathan P., Robl J.M., Collas P. (2004) Cloned calves from chromatin remodeled in vitro. Biology of Reproduction 70, 146-153 Swissinfo 24th May 2005 http://www.nzz.ch/2005/05/24/eng/article5812991.html Tsukui T., Kanegae Y., Saito I., Toyoda Y. (1996) Transgenesis by adenovirus-mediated gene transfer into mouse zona-free eggs. Nature Biotechnology 14, 982-985 Vajta G., Kragh P.M., Mtango N.R., Callesen H. (2005) Hand-made cloning approach: potentials and limitations. Reproduction, Fertility and Development 17, 97-112 Wells D.N., Misica P.M., Tervit H.R., Vivanco W.H. (1998) Adult somatic cell nuclear transfer is used to preserve the last surviving cow of the Enderby Island cattle breed. Reproduction, Fertility and Development 110, 369-378 Whitelaw, C.B.A .(2004) Transgenic livestock made easy. Trends in Biotechnology 22, 157159 WHO (2005) Modern Biotechnology, human health and development: an evidence-based study Whittemore, Colin T. (1998) The science and practice of pig production 2nd ed. Oxford : Blackwell Science. Wilmut I., Schnieke A.E., McWhir J., Kind A.J., Campbell K.H. (1997) Viable offspring derived from fetal and adult mammalian cells. Nature 385, 810-813. 51 Wrenzycki C. and Niemann H. (2003) Epigenetic reprogramming in early embryonic development: effects of in-vitro production and somatic nuclear transfer. Reprod. Biomed. Online 7, 649-656. 6.2 Bibliography Baguisi A., Behboodi E., Melican D.T., Pollock J.S., Destrempes M.M., Cammuso C., Williams J.L., Nims S.D., Porter C.A., Midura P., Palacios M.J., Ayres S.L., Denniston R.S., Hayes M.L., Ziomek C.A., Meade H.M., Godke R.A., Gavin W.G., Overstrom E.W. and Echelard Y. (1999) Production of goats by somatic cell nuclear transfer. Nature Biotechnology 17, 456-461. Campbell K.H,. Alberio R., Choi I., Fisher P., Kelly R.D., Lee J.H. and Maalouf W.(2005) Cloning: eight years after Dolly. Reprod. Domest. Anim. 40, 256-268. Galli C., Duchi R., Crotti G., Turini P., Ponderato N., Colleoni S., Lagutina I .and Lazzari G. (2003) Bovine embryo technologies. Theriogenology 59, 599-616. Gomez M.C., Jenkins J.A., Giraldo A., Harris R.F., King A., Dresser B.L. and Pope C.E. (2003) Nuclear transfer of synchronized african wild cat somatic cells into enucleated domestic cat oocytes. Biol. Reprod. 69, 1032-1041. Heyman Y. (2005) Nuclear transfer: a new tool for reproductive biotechnology in cattle. Reprod. Nutr. Dev. 45, 353-361. Kues W.A. and Niemann H. (2004) Trends Biotechnol. 22, 286- 294. Lanza R.P., Cibelli J.B., Diaz F., Moraes C.T., Farin P.W., Farin C.E., Hammer C.J., West M.D. and Damiani P. (2000) Cloning of an endangered species (Bosgaurus) using interspecies nuclear transfer. Cloning 2, 79-90. Maga E.A. (2005) Genetically engineered livestock: closer than we think? Trends Biotechnol. 23, 533-535 Lai L. and Prather R.S. (2002) Progress in producing knockout xenotransplantation by nuclear transfer. Ann. Med. 34, 501-506 models of Niemann H., Rath D. and Wrenzycki C. (2003) Advances in biotechnology: new tools in future pig production for agriculture and biomedicine. Reprod. Domest Anim. 38, 82-89 Olive V. and Cuzin F. (2005) The spermatogonial stem cell: from basic knowledge to transgenic technology. Int. J. Biochem. Cell Biol. 37, 246-250 Piedrahita J.A. and Mir B. (2004) Cloning and transgenesis in mammals: implications for xenotransplantation. Am. J. Transplant. 4 Suppl. 6, 43-50 Polejaeva I.A. (2001) Cloning pigs: advances and applications. Reprod. Suppl. 58, 293-300 Prather R.S., Hawley R.J., Carter D.B., Lai L. and Greenstein J.L. (2003)Transgenic swine for biomedicine and agriculture. Theriogenology 59, 115-123 Renard J.P., Zhou Q., LeBourhis D., Chavatte-Palmer P., Hue I., Heyman Y. and Vignon X. (2002) Nuclear transfer technologies: between successes and doubts. Theriogenology 57, 203-222 Schatten H., Prather R.S. and Sun Q.Y. (2005) The significance of mitochondria for embryop development in cloned farm animals. Mitochondrion 5, 303-321 Sutovsky P. and Prather R.S. (2004) Nuclear remodeling after SNCT: a contractor's nightmare. Trends. Biotechnol. 22, 205-208 Thompson AJ, Marques MM and McWhir J (2003) Gene targeting in livestock. Reprod. Suppl. 61, 495-508 52 Wang B. and Zhou J. (2003) Specific genetic modifications of domestic animals by gene targeting and animal cloning. Reprod. Biol. Endocrinol. 1, 103 Wells D.N. (2005) Animal Cloning: problems and prospectives. Rev. Sci. Tech. 24, 251-264 Wheeler M.B. (2003) Production of transgenic livestock: promises fulfilled. J. Anim. Sci. 81 Suppl 3, 32-37 Whitelaw C.B.A. and Sang H.M. (2005) Disease-resistant genetically modified animals. Rev. Sci .Tech. 24, 275-283 Wilmut I., Beaujean N., de Sousa P.A., Dinnyes A., King T.J., Paterson L.A., Wells D.N. and Young L.E. (2002) Somatic cell nuclear transfer. Nature 419, 583-586 53 SECTION 7 GLOSSARY Adenovirus Chromatin transfer A group of DNA containing viruses which cause respiratory disease in animals, including one form of the common cold. These viruses can be genetic modified by removing, adding or altering part of their DNA - and used in gene therapy to treat disease. A novel system for cloning. In this method the chromatin of the donor somatic cell nucleus is altered (remodelled) through removal of some component of chromatin. Differentiation (cell differentiation) This is a concept from developmental biology describing the process by which a given cell acquires a specific morphological characteristic (type), e.g. shape, function, composition. The genetic material does not change, rather the specific sets of genes that are active change. This is associated with changes in chromatin. Blastocyst During early mammalian (including human) development the zygote undergoes cleavage increasing the number of cells. When the number reaches 20-150 cells, a central fluid filled cavity is formed. This stage in the development of the embryo is the blastocyst and lasts until the embryo is implanted into the uterus. Embryonic stem cells An embryonic cell that can replicate indefinitely (self renewal), transform into other types of cells (differentiation), and serve as a continuous source of new cells. Experimentally defined as being able to contribute to all cells of the body during the development of an embryo. To date the only true embryonic stem cells (relating to experimental criteria above) have been identified in the mouse. Human embryonic stem cell lines have been generated and shown to differentiate into certain cell types while grown in culture in the laboratory. Often termed ES cells. Blastula The generic term for blastocyst in all animals; blastocyst is restricted to mammalian animals. Breeding pyramid The use of a few selected elite animals to produce many production animals. The genetic and economic merit of the elite animals is greater than that of the production animals. Current animal breeding tries to maximise the merit of the production animals. Enucleation Centrifugation The process of removing the nucleus from an egg. A prerequisite step in cloning by nuclear transfer. The separation of factors through spinning, usually in a large armoured machine commonly found in research laboratories. Epigenetics The study of chromatin changes to genetic material, excluding changes to the DNA itself. Only in rare cases can these changes be inherited. Chimera A genetic mosaic. An organism in which different cells contain different genetic sequences. Fibroblasts Chromatin A fibroblast is a cell that can give rise to other cell types such as bone cells, fat cells and muscle cells. The substance of chromosomes that comprises the DNA and associated proteins in eukaryotic cells. The major proteins involved are histone proteins. Changes in chromatin are associated with DNA replication and gene activity. Gamete The sex cells - egg or sperm. 54 Genome when first introduced into the genome is only located on one copy, hence hemizygous. Such a transgene can be breed to homozygousity by the mating of, for example, siblings The whole hereditary information of an organism. Mainly composed of DNA and/or RNA. Gene targeting Heterochromatin An experimental method based on the process of homologous recombination that allows specific changes to a target gene sequence to be engineered. A type of chromatin that is tightly packaged and usually harbouring inactive genes Heterosis Genetic plasticity The increased strength of different characteristics in hybrids, the possibility to obtain a "better" individual by combining the virtues of its parents. In plants termed hybrid vigour. The ability of a cell of one type to change into another type, e.g. fibroblasts can become fat cells. Dramatically demonstrated through the birth of 'Dolly' who was produced by cloning of a mammary cell. Homologous recombination Generation interval The exchange of pieces of DNA that share common sequences. Used experimentally to introduce a new piece of DNA into a genome (the DNA of a cell) and found naturally during the mixing of genetic material that happens within an egg or sperm as these cells mature. The latter is termed crossing and allows chromosomes to shuffle their genetic material increasing the potential of genetic diversity. The time between sexual maturity of one animal and its offspring. Genetic lag The difference between the genetic merit (somewhat equivalent in commercial breeding animal to economic merit) of one animal compared to a population of animals under continual breeding selection. Imprinted gene Germ line Imprinted genes are genes whose expression is determined by the parent that contributed them. In somatic cells, a gene comprises of two alleles; one allele derived from the mother the other from the father. Both alleles are usually active, however the activity of an imprinted gene is determined by which parent passed on which allele. Often associated with disease, e.g. Prader-Willi and Angleman syndromes. Genetic material, DNA and RNA, that comes from the egg or sperm of the parent that is passed onto the offspring becoming their germ line. Gestation Duration of pregnancy from conception to birth of offspring. Head-to-tail array DNA constructs (including genes) have a directional property. The arrangement of two DNA constructs can be in the same or opposite orientation. Head-to tail indicates that they are in the same orientation. Integration event The process of combining two apiece of DNA into a larger piece of DNA. Used in the context of a transgene recombining with the host genome. Hemizygous Introgression Each gene comprises of two DNA strands, often termed alleles. If the sequence of each allele is identical this is termed homozygous. If the alleles contain some sequence differences (polymorphic) they are termed heterozygous. A transgene The process of successfully incorporating a specific genotype (combination of allelic types) into a breeding population. 55 Lentivirus monoploid number. The ploidy of cells can vary within an organism. In humans, most cells are diploid (containing one set of chromosomes from each parent), though gametes are haploid. A type of retrovirus, including HIV. These viruses can be genetic modified - by removing, adding or altering part of their DNA - and used in gene therapy to treat disease and the generation of transgenic animals. Primordial germ cells Locus The premature germ cells found in an embryo. A genetic region within the genome. Pronucleus Lysostaphin The nucleus of the sperm or egg prior to fertilisation. Lysostaphin is an enzyme (peptidase) that digests proteins. It specifically destroys certain bacterial cell walls. Provirus The DNA form of a RNA virus, e.g. a retrovirus. Methylation A chemical change where a methyl-group is added to a molecule, e.g. DNA, protein. Quiescent-cell cycle resting stage Cell growth comprises of a cycle; first growth phase (G1), DNA replication (S), second growth phase (G2) and cell division (M). Given the appropriate environment or stimuli a cell can exit the cell-cycle and stop growing forming resting phase (G0). Micromanipulator A machine used to inject cells, including oocytes and zygotes. Mosaic A mixture of something, e.g. gene activity, genetic composition (i.e. a chimera). Reconstructed embryo mRNA An embryo that has been formed by nuclear transfer (cloning). Messenger RNA is a single stranded nuclei acid which is the template for protein synthesis (that occurs in the ribososme found in the cytoplasm of cells). It is direct copy, produced during transcription in the nucleus, of parts of one strand of DNA. Recombinant Through the application of a variety of molecular biological techniques new combinations of DNA and RNA can be generated. Used to study the activity of genes or produce new proteins. Nucleus herd Recombinase In many farmed species, genetic change is produced in specific herds and then disseminated to other farms through transfer of animals, semen or embryos. The herds used to produce genetic change are known as nucleus herds. An enzyme that can catalyse the mixing (recombination) of DNA pieces. Usually functions through specific short DNA sequences (a consensus sequence). Of great use in research. Re-programming Oocyte The conversion of one cell type into another through nuclear transfer (cloning), i.e. the conversion of a mammary cell into a embryo that resulted in the birth of 'Dolly'. The female gamete or sex cell. Parturition The process of giving birth. Ploidy Retrovirus The number of copies of chromosomes in a nucleus. The number of basic sets of chromosomes in an organism is called the A RNA virus that can cause many diseases including cancer and AIDS. 56 During infection of a host cell the RNA of the virus is converted into DNA (the provirus) which then can insert itself into the cells own DNA (genome). These viruses can be genetic modified - by removing, adding or altering part of their DNA - and used in gene therapy to treat disease and the generation of transgenic animals. Transgene silencing A phenomenon observed but not clearly understood, although often associated with DNA methylation and other chromatin remodelling events.. Pending on the sequences within a transgene and where that transgene is located within the genome, the transgene can become inactive or silenced. RNA interference Transposable sequence A natural process that has been harnessed to experimental use. Specific small RNA sequences in the correct configuration can cause the destruction of target mRNA sequences thereby affecting gene activity patterns within a cell. A natural class of DNA sequences that can move from one chromosome site to another within the genome. These elements can be genetic modified - by removing, adding or altering part of their DNA - and used in gene therapy to treat disease. Somatic cells All body cells except the reproductive cells, i.e. eggs and sperm. Transposon A transposable sequence. Telomerase Vector The enzyme that directs the replication of the ends of chromosomes (termed telomeres). These specialised structures are involved in the replication and stability of chromosomes, associated with the cellular aging process. An agent, such as a virus or a small piece of DNA called a plasmid, that carries a recombinant or foreign gene. Used for gene therapy, to generate a transgenic animal or deliver DNA to target cells grown in culture in a laboratory. Transcriptionally silent Zona pellucida An inactive region of DNA, usually associated with a inactive (silent) gene. The jelly-like structure composed of proteins which surround a zygote. It limits access of multiple sperms to the already fertilised zygote and prevents viral infection. Transcription regulating elements Regions of DNA that control the activity of a gene. Zygote Transgenic The fusion of sperm and egg results in the formation of the single cell zygote. An experimentally produced organism in which DNA has been artificially introduced or changed such that it is incorporated into the organism's germ line. 57 SECTION 8 APPENDICES 8.1 Appendix 1 Methodology for bibliographic analysis We found there was no generic database which appeared to give thorough retrieval and additionally there appear to be inconsistencies in the use of terms. We therefore undertook searches on several databases and subsequently removed any duplicates. We searched Articlefirst on Firstsearch and Web of Science. Spot checks indicated that we did not have thorough coverage of some key journals, so additional searches were carried out through their respective journal web pages (Nature, Nature Biotechnology, Nature Genetics, Nature Medicine and EMBO Journal). Because the different databases provide different search facilities, different search strategies were adopted. Articlefirst Advanced search allows maximum of 3 keywords [with Boolean operators “and” “or” and “not” Search terms used were: cloning AND animals NOT mouse/mice/rats cloned AND animals cloning AND cows/cattle/livestock/bovine/calf cloning AND cats/kittens cloning AND sheep/lamb/ruminants cloning AND dogs/puppies cloning AND pigs cloning AND deer cloning AND fish/trout/salmon/tilapia cloning AND primates cloning AND goats cloning AND horses/mules cloning AND poultry/chickens cloning AND rabbits genetic AND modification AND animals GM AND animals (The search term ‘GM’ was found to be unhelpful) somatic cell nuclear transfer transgenic AND animals Web of Science Allows truncation, Boolean operators and addition of fields to search. Includes much more information e.g. authors’ addresses The search terms used were: genetic* AND modif* AND animal* AND journal name [if Nature stable] 58 clon* AND animal* AND journal name [if Nature stable] transgenic AND animal* AND journal name [if Nature stable] somatic + cell + nuclear + transfer –mice-mouse-rats Searches on individual animal name(s) were also used. The data were manually screened to eliminate: Publications relating to ethical issues Publications not relevant to the search (e.g. cloned genes) Publications which were clearly review articles, although it is likely that some review articles remained as they were not clearly identified Publications were categorised according to species (using the title and abstract where available) and research area. A very small number of publications referred to more than one species in which case the paper was categorised according to the first species mentioned. Where possible, author addresses and affiliations were traced. This was a very timeconsuming exercise and was not possible for all of the publications identified. Publications were then categorised to a country (based on address of the first named author). Where all the authors had academic addresses, the publication was categorised as academic. Where all the authors had an industry address the publication was categorised as industry only. Otherwise the publication was categorised as joint academic-industry. With thanks to Moyra Forrest, information officer at Innogen, for her assistance with this analysis. 59 8.2 Appendix 2 The Cost Benefits of Cloning in a Pig Breeding and Production Systems The genetic merit of terminal sires used for Artificial Insemination (AI) would be improved where the terminal sires are clones of high merit animals. Current practice for selection of terminal sires for AI involves identification of boars with good breeding values from nucleus herds, but levels of semen production limits the extent of selection and therefore restricts the genetic merit of boars used. The commercial success of cloning depends on the cost of cloning AI boars versus the resulting improvements in cost of production in the slaughter generation. A simple spreadsheet model of finances in a “typical” European pig breeding and production operation was set up using the major performance characteristics, cost structures and feed prices as inputs. Information was obtained from various sources including UK Meat and Livestock Commission (Pig Cost of Production in Selected EU Countries: Knowles and Fowler 2004) and trade sources of feed and carcase prices for 2005. This model can be used to give a general indication of the financial effects of using cloned AI boars. Detailed predictions for individual countries or production operations would require separate analyses using appropriate data. It is assumed that cloning of very high merit boars is to be used instead of the current practice of selecting boars of good merit. In such a system slaughter generation animals are not clones, but are related as half sibs (same genetic father, but different mother). Current AI boars are assumed to represent the top 10% of boars in the nucleus population for both growth rate and back-fat. Different breeding companies / markets use different economic indices to identify animals of good genetic merit and it is beyond the scope of this analysis to make detailed comment on the most appropriate index. However, most breeding programmes will use indices which place high weighting on growth and back-fat for selection of sire line pigs. Sire lines are assumed to be 10% better than the slaughter generation in growth rate (days to slaughter) and back-fat, and dam lines are assumed to be 10% worse. Coefficient of variation (CV) for growth and back-fat are assumed to be 12% and 20%, and heritabilities are assumed to be 0.3 and 0.4 respectively. It is assumed that there will be a genetic lag of one generation in producing clones to be used at stud. Boars are assumed to be used for 1 year producing 25 tubes of semen per week which are used at a rate of 2.2 tubes per sow. The effect of moving from the current practice to using cloned boars is calculated as the difference between performance of the top 10% and the top 1% or 0.5% for each trait of boars from the nucleus herd. Whether cloning in practice can achieve selection within the top 1%, 0.5% or even higher depends on the effectiveness of the cloning procedure, the size of the nucleus herd and the demand from customers – all of which have yet to be determined. The figures of 1% and 0.5% are thought to be reasonable estimates of what is likely to be achievable. It is assumed that all animals can be cloned and that there is no effect of the procedure on the fertility of the cloned boars. If either of these factors were to be significant, then the cost effectiveness of using cloned boars would be reduced. The financial model is shown in Table 1. There are likely to be major improvements in cost of production (Table 2) as a result of using cloned boars of at least €1.18 to €1.68 per pig produced for slaughter from the top 1% and top 0.5% of nucleus herd boars respectively. This translates to 1.1% - 2.4% improvement in costs depending on the production system. The cost benefit to the operation per cloned boar is in the range €6900 - €19000 depending upon the production system (Table 2). Application of the technology would be financially worthwhile where the cost of cloning boars is significantly less than this. Assuming that the European slaughter pig herd totals 243 million (FAS 2005) and that 50% of these pigs were to be produced using AI then using cloned AI boars would represent a cost of production improvement of between €143M and €204M for European pig producers. 60 This analysis is based on conservative estimates of improved growth and back-fat levels achieved by using clones of the fastest growing and leanest boars. The difference between current average AI boars and clones of top boars may be even greater than used in these calculations. Furthermore these estimates do not take account of advantages that would be achieved in the processing chain, from improved saleable yield per carcase and reduced wastage. Even further financial benefit is likely to be seen by using indices including additional production parameters appropriate to individual production systems. Identifying boars with desirable characteristics in meat quality or skeletal integrity would also improve the cost effectiveness of cloning. An approach such as this would be very efficient in producing boars for “niche” products for premium quality markets. Equally, such an approach could also be adapted to make maximum use of exceptionally high performing animals in demand by a number of customers / markets. Use of cloned AI boars would reduce the number of boars being used in commercial production operations from typical levels of 10 to 50 per operation to effectively less than 5, or even 1. It is likely, however that different operations and different countries / markets would require different boars for their own particular needs. This procedure for use of cloned boars is analogous to the traditional practice of identifying the best boar for use on an individual farm and using only this boar for a period of time. Slaughter generation animals are half sibs with variation in the slaughter generation being maintained within the dam lines. Breeding companies would still have to maintain nucleus herds of the current size to ensure adequate control over inbreeding. This technology would not be appropriate to a nucleus herd since the use and rapid turnover of a number of high merit boars is required to generate the genetic variation required to produce subsequent generations. A number of economic factors are likely to affect pork production in the next decade. Factors which reduce the cost of production such as CAP reform reducing the cost of feed act to reduce the cost advantages of using cloned boars in absolute but not relative terms. Factors which increase the cost of production such as increased cost of disposing of waste will increase the cost advantages of using cloned boars in absolute but not relative terms. 61 Table 1. Performance and cost in a typical European pig production operation. Performance is predicted for a base population using AI (from top 10% boars) and for breeding herds using AI from cloned boars deriving from the top 1% and top 0.5% of the nucleus population for days to slaughter and back fat depth. Parent Generation Base Top 1% Top 0.5% Number of litters per year 2.23 2.23 2.23 Pigs born alive per litter 11.16 11.16 11.16 Piglet mortality % 11.65 11.65 11.65 Pigs reared per litter 9.86 9.86 9.86 Pigs reared per sow per year 21.99 21.99 21.99 Sow feed consumption tonnes 1.195 1.195 1.195 Sow feed cost €/tonne 157.68 157.68 157.68 Feed cost per sow € 188.43 188.43 188.43 feed cost per piglet € 8.57 8.57 8.57 Slaughter Generation Base Top 1% Top 0.5% Age days 166.0 164.4 163.7 Live weight kg 111.00 111.00 111.00 Backfat mm 12.00 11.65 11.54 Killing Out % (from Whittemore 1998) 77.43 77.39 77.37 Dead weight kg 85.947 85.901 85.885 Lean Meat% (from Whittemore 1998) 58.23 58.63 58.76 Lean Meat kg 64.638 65.082 65.226 FCR 2.830 2.790 2.773 Feed Consumption / day @ 100kg 2.8 Feed Consumed (kg) 314 310 308 Grower feed €/kg 178.38 178.38 178.38 Costs Base Top 1% Top 0.5% Sow feed cost per piglet € 8.57 8.57 8.57 Growing feed cost € 56.03 55.24 54.90 Other Variable costs € 14.01 13.87 13.81 Other Variable costs / day € 0.08 Fixed Costs € 25.67 25.42 25.32 Fixed Costs / day € 0.15 Total Cost per slaughter pig € 104.28 103.10 102.60 1.18 1.68 Improvement per slaughter pig € 62 Table 2. Costs of production in a typical European operation. Costs are calculated for a base population using AI and for breeding herds using AI from cloned boars deriving from the top 1% and top 0.5% of the nucleus population for days to slaughter and back fat depth. Cost of Production Base Top 1% Top 0.5% Cost of production €/kg lwt 0.939 0.929 0.924 Cost of production €/kg dwt 1.213 1.200 1.195 Cost of production €/kg lean meat 2.084 2.047 2.033 Cost of production €/kg lwt 0.011 0.015 Cost of production €/kg dwt 0.013 0.019 Cost of production €/kg lean meat 0.037 0.051 Cost of production €/kg lwt % 1.13 1.61 Cost of production €/kg dwt % 1.08 1.54 Cost of production €/kg lean meat % 1.75 2.43 Improvements Improvements % Improvement per Stud Boar Base Top 1% Top 0.5% Cost of production per pig (live) 104.28 103.10 102.60 Improved cost per pig (live) € 1.18 1.68 Improved cost € per boar @ 5826 pigs/boar/y 6878.07 9796.43 Improvement per Stud Boar Base Top 1% Top 0.5% Lean meat kg / carcase 64.638 65.082 65.226 Improved cost of production of lean meat / pig € 2.38 3.30 Improved cost € per boar @ 5826 pigs/boar/y 13852.00 19234.13 63 8.3 Appendix 3 Questions to companies working on animal cloning and/or GM animals INSTRUCTIONS – completing the form electronically Please “tick” relevant boxes where the following symbol is shown using a mouse Please provide information in boxes by clicking on boxes by clicking on the box and typing INSTRUCTIONS – completing the form by hand Please tick relevant boxes and write information in boxes. Where insufficient space, please use extra sheets where necessary, and write the question number your answer corresponds to. INFORMATION ON RESPONDANT Respondent Name Position within the Organisation BUSINESS DETAILS 1.A. Please describe your organizations Cloning & GM activities: Only animal cloning Only GM animals Animal cloning AND GM animals None of the above If None of the above, please state your organizations business 1.B. From these animals, is your organization selling; Offspring Derived products Other (please state) 2. Which species do you work with? Cattle Sheep Pigs Salmon Chickens 64 Tilapia Cats Goats Zebrafish Other (please state) 3. Which of the following target sectors do you work in (if more than 1 sector, please rank in order of priority, 1 being most important)? Tick box Priority number Food production Molecular pharming – (producing animals that will produce pharmaceutical products) Xenotransplantation Pet sector Sporting animals Endangered species Other? please state 4.Does your business currently or intend to offer a business or a service, or both A service A product Both a service and a product 5. What sort of organisation are your actual or expected customers? Individual pedigree animal breeders Individual commercial animal breeders Animal breeding companies Healthcare providers Private individuals Zoos Other (please state) 6. Which geographical markets are your priorities? 7. In which countries do you have products in the market? 8. What is your business model or structure, how do/will you make your money? 9. What products do you have on the market? And of these products what total value or volume(s) have been sold? 65 <$50,000 $50-200,000 $200,000 – $1m >$1m Volume – Please state 10. What is your price model per unit $1-10 $10-50 $50-200 $200-1000 $1000-5000 $5-10,000 $10-50,000 >$50,000 11. Do you have a price list we could Yes have? No 12. What share of your business cash-flow comes from sales? <5% 5-10% 10-30% 30-50% >50% 13. How many cloned/GM, cloned and GM animals do you have? <5 5-10 10-30 30-50 >50 14. What is the cost of producing clones, GM animals or cloned/GM animal? Cloned GM $1-10 $10-50 $50-200 $200-1000 $1000-5000 $5-10,000 66 Cloned GM $10-50,000 >$50,000 15. How do you see costs evolving in the future; Decreasing Staying the same Increasing Next 5 years (2005-2010) 5-10 years (2010-2015) 10+ years (after 2015) 16. How do you picture the future for your business? 17.Optional question for food production organizations - When do you think cloned/GM animals will be affordable for an average farmer? Next 5 years (2005-2010) 5-10 years (2010-2015) 10+ years (after 2015) 18. What products do you expect to have on the market in the next 5 years (2005-2010) and 510 years (2010-2015), 10+ years (after 2015)? Product - We would like a next 5 years 5-10 years (2010- 10+ years (after detailed description of (2005-2010) 2015) 2015) (i) animal (ii) primary product and or ultimate product, i.e. (i) Cattle (ii) Genetically modified to produce human growth hormone 19. How do you see your cloning/gm business share evolving in the next 5 years (2005-2010) and 5-10 years (2010-2015), 10+ years (after 2015)? next 5 years (2005-2010) 5-10 years (2010-2015) 10+ years (after 2015) Decreasing Increasing Other – Please state 20. Thinking more broadly about this sector what products do you see coming in these timescales? 21. Is there company literature (Brochure/company report) we can have a copy of? Brochure/company report? Yes No 22. Do you have publicly available information on the benefits of your products that you could send us? Yes No 23. Who are the owners of the company and what are their expectations? 24. Who are your business/academic 67 collaborators? 25. Do you have other non-cloning non-GM services/products in your portfolio? No Yes If Yes please describe 26. We would like to know what share of your R&D budget%, sales and profit%, total no. of employees is engaged in animal cloning, gm or both. GM and cloned R&D animals, or offspring or budget% derived products sales and Total no. of profit% employees <5% 5-10% 10-30% 30-50% >50% 27. We would like to know what share of your business in animal cloning, gm or both is on the market or in the pipeline? GM and cloned On market animals, or offspring or derived products In pipeline <5% 5-10% 10-30% 30-50% >50% 28. What size is your organization? Turnover <$50,000 $50-200,000 $200,000 – $1 m >$1m No. of staff <5 5-10 10-30 30-50 50-100 100-200 >200 68 29. How much do you invest in R&D, TT and innovation related to cloning/GM? <$50,000 $50-200,000 $200,000 – 1 m >$1m 30. How share of investments in R&D, TT and innovation related to cloning/GM compare with your other activities? <5% 5-10% 10-30% 30-50% >50% TECHNICAL 31. What do you feel are your technological barriers remaining to be overcome? SOCIAL, REGULATORY AND ECONOMIC IMPACT 32. To what extent do you agree/disagree with the following statement relating to regulatory issues relating to your product(s) Agree strongly Agree Neither Disagree agree nor disagree Disagree strongly The regulation in this area is well defined There is no regulation in this area The regulation is confusing The regulation is excessive The regulation is inadequate 33. What do you feel are the public attitudes to your product(s) Very positive Positive In North America In Europe In Asia In Australia/New Zealand GENERAL 34. Who else do you think we should talk to /contact in this area? 69 Neither positive nor negative Negative Very negative Don’t know 8.4 Appendix 4 Letter to companies accompanying questionnaire Dear Transgenic or cloned animal commercialisation The European Commission has commissioned a study which aims to anticipate which GM and/or cloned animals and derived products will request authorisation for commercialisation in the EU over the next decade. This study is being carried out by the Genesis-Faraday Partnership, Edinburgh (UK) through the European Science and Technology Observatory (ESTO) network, in co-operation with the Institute for Prospective Technological Studies (IPTS), Seville (Spain) from the European Commission Joint Research Centre. We believe it is important to include your input in this study, I realise that that you are a very busy person, but assure you that this should not occupy more than 0.5-1 hour of your time. This research would take the form of a confidential questionnaire, which I include. The questionnaire will be treated as strictly confidential and only aggregated results will be presented. We would be grateful if you could please return the questionnaire by June 10th. Your kind co-operation would be greatly appreciated by both the European Commission and myself at the Genesis Faraday Partnership. Yours sincerely Cecilia Oram Technology Translator Genesis Faraday Roslin BioCentre Roslin Midlothian Scotland UK EH25 9PS tel +44 131 527 4332 fax +44 131 527 4335 cecilia.oram@genesis-faraday.org 70