Chapter 01 Alga (plural, algae) (L. alga, seaweed) informal name for a large group of species of simple, photosynthetic, mainly aquatic plants that lack vascular tissue (and therefore lack true stems, leaves, and roots); in this textbook, some algal groups (green, red) are classified in the plant kingdom, whereas most (brown, golden, diatoms) are classified as protists Anatomy (Gr. anatome, dissection), the study of the internal structure of organisms Animalia (L. animalis, living) the animal kingdom Archaea (Gr. arckhaios, ancient) a domain of prokaryotic organisms, including methane-producing, halophilic, and hot acid–dwelling forms Archaebacteria see Archaea Bacteria (Gr. bakterion, a stick) a domain of prokaryotic organisms; also, common name for prokaryotes Biogeography (Gr. bios, life + ge, Earth + graphein, to write) the study of the geographic distribution of organisms and the reasons for the limits to their distribution, often including distributions over geologic time and with a focus on taxonomically related organisms (families, genera); see Plant geography Biology (Gr. bios, life + logos, word, speech, discourse) the science that deals with living things Biosystematics (Gr. bios, life + synistanai, to place together) a field of taxonomy that emphasizes breeding behavior and chromosome characteristics Blue–green algae see Cyanobacteria Botany (Gr. botane, plant, herb) the study of plant and plantlike organisms; synonym, plant biology Cellulose (cell + ose, a suffix indicating a carbohydrate) a complex carbohydrate occurring in the cell walls of the majority of plants; it is composed of hundreds of simple sugar molecules, glucose, linked together in a characteristic manner; cotton fibers are largely cellulose Clade (Gr. klados, twig) a branch in the tree of life, consisting of an originating taxon and all of its descendant taxa Cladistics (Gr. klados, twig) a set of quantitative methods and concepts for generating hypotheses about the evolutionary relationships among taxa; a form of systematics that shows evolutionary relationships among organisms by arranging them in a branching diagram (a cladogram), each branch representing organisms that share certain derived traits Cladogram (Gr. klados, twig + gramma, letter) a diagram presenting a hypothesis on the sequence of branching events that occurred to generate a given set of presentday taxa from their common ancestor Conservation (L. conservare, to keep) in biology, the systematic protection of natural resources and species; also the study of techniques for protecting resources and species Cyanobacteria (Gr. kyanos, blue) a group of unicellular or filamentous photosynthetic prokaryotes also capable of fixing nitrogen; also called blue–green algae Cytoplasm (Gr. kytos, a hollow vessel + plasma, form) all the protoplasm of a protoplast outside the nucleus Ecologic(al) services products of ecosystems that sustain aquatic and terrestrial life, including the production of oxygen (through photosynthesis), the filtering of pollutants, and the stabilization of soil Eukarya (L. eu, true + karyon, a nut, referring in modern biology to the nucleus) a taxonomic domain of organisms characterized by having cellular organelles, specifically including the nucleus, bounded by membranes Evolution (L. evolutio, an unrolling) in biology, any change in hereditary characteristics of a population or species, or the formation of new species Extreme halophiles certain Archaea capable of living in hypersaline habitats Food chain the path along which caloric energy is transferred within a community (from producers to consumers to decomposers) Fungi the monophyletic kingdom that contains all true fungi Fungus (plural, fungi) (L. fungus, a mushroom) any chemoheterotrophic eukaryote that reproduces with spores and has cell walls at some stage of life Herbicide (L. herba, grass or herb + cidere, to kill) a chemical used to kill plants, frequently chemically related to a hormone (as the herbicide 2,4-D is related to the hormone IAA); an herbicide may have narrow or wide selectivity (range of target organisms) Hypothesis (Gr. hypothesis, foundation) a tentative theory or supposition provisionally adopted to explain certain facts and to guide in the investigation of other facts Kingdom (O.E. cyningdom, territory ruled by a king or queen) in the taxonomic hierarchy, a group of phyla or divisions Metabolism (M.L. from the Gr. metabolos, to change) the process, in an organism or a single cell, by which nutritive material is built up into living matter, or aids in building living matter, or by which protoplasm is broken down into simple substances to perform special functions Molecular biology a field of biology that emphasizes the interaction of biochemistry and genetics in the life of an organism Monophyletic group (Gr. mono, single + phyle, tribe) a group of organisms or taxa that includes an ancestor, all of its descendants, and nothing else Morphology (Gr. morphe, form + logos, discourse) the study of form and its development Mycologist (Gr. mykes, mushroom + logos, discourse) a scientist who specializes in the study of fungi Organelle a specialized region within a cell, such as the mitochondrion or dictyosome Paleoecology (Gr. palaios, ancient) a field of ecology that reconstructs past vegetation and climate from fossil evidence Pathogen (Gr. pathos, suffering + genesis, beginning) an organism that causes a disease Pathology (Gr. pathos, suffering + logos, account) the study of diseases, their effects on plants or animals, and their treatment Photosynthesis (Gr. photos, light + syn, together + tithenai, to place) a process in which carbon dioxide and water are brought together chemically to form a carbohydrate, the energy for the process being radiant energy Phycology (Gr. phykos, seaweed + logos, word, thought) the science of the study of algae Phylogenetic tree a diagrammatic representation of evolutionary relationships for a group of organisms; a cladogram is a type of phylogenetic tree Physiology (Gr. physis, nature + logos, discourse) the science of the functions and activities of living organisms Phytoplankter (Gr. phuto, plant + plankter, wanderer) a photosynthetic organism (generally single-celled) that is part of the plankton, a body of floating cells near the surface of fresh or saline bodies of water Plant biology the study of plant and plantlike organisms; synonymous with botany Plant ecology the study of how the environment affects plant organisms Plant genetics the study of plant heredity Plant molecular biology the study of the biology of a plant cell at the molecular level Plant morphology the study of how a plant develops from a single cell into diverse tissues and organs and an array of outer surfaces and shapes Plant physiology the study of the physical and chemical processes involved in the functioning of the plant Plant systematics the study of plant evolution and classification Plantae the monophyletic kingdom of life that includes all green plants and some algae Prokaryote (Gr. pro, before + Gr. karyon, a nut, referring in modern biology to the nucleus) member of the domain Archaea or Bacteria; an organism that does not have its DNA in a nucleus, separated from the cytoplasm by an envelope Protista (Gr. protistos, the very first) an artificial (nonmonophyletic) grouping of eukaryotic organisms that are not included in kingdoms Plantae, Fungi, or Animalia; organisms within it are called protists Scientific method an iterative process of stating, testing, and refining hypotheses that best explain natural phenomena Species diversity the sum of every species present in an area, each species being multiplied by its relative abundance; compare with species richness Spore (Gr. spora, seed) a one-celled or few-celled reproductive unit that develops into a multicellular organism without first fusing with another reproductive unit; contrast with seed and gamete Systematics the discovery and scientific study of biological diversity with the aim of organizing that diversity into a system of named groups that is easy to use, has predictive value, and reflects our understanding of the relationships between the organisms; systematics and taxonomy are closely related, and many scientists use the terms more or less interchangeably Wood Age the span of history during which wood was the, or one of the, principal materials for houses, fuel, and vehicles; considered by some to include the Stone Age, Bronze Age, Iron Age, Industrial Age, Nuclear Age, and up to the present Zoology (Gr. zoon, an animal + logos, speech) the science of animal life