Science Study Guide Chapter 8 – INSTRUCTIONS FOR LIFE KEY CONCEPTS AND VOCABULARY Learning Log – Your Learning Log, which is your “test aid” should contain the following PRIMARY CONCEPTS along with the VOCABULARY WORDS that you will need to explain your understanding of each concept. CONCEPT 1 – DNA is found in all living things and carries the genetic code for their characteristics. DNA is found in the nucleus of all plant and animal cells and therefore, DNA is found in all living things. DNA consists of a string of molecules called Nucleotides and it is these nucleotides that provide the codes for making Proteins. The Proteins that cells make determine the characteristics of all organisms. There are four types of nucleotides in all DNA strands. They are: Cytosine, Guanine, Thymine and Adenine. They are typically identified using the First Letter of each of the Nucleotides, C, G, T and A. The Sequence of these Nucleotides in each DNA strand provides the Code for making the proteins that determine the traits or characteristics of all living organisms. CONCEPT 2 – DNA can replicate to pass its genetic information to newly formed cells. DNA carries the code for making Proteins that determine the characteristics of all living organisms. This Code must be present in every cell in an organism. In order to get this code in every cell, DNA must be able to Copy Itself. This process is called REPLICATION. Replication is important for TWO REASONS: 1. Replication during the Meiosis process creates Gametes, which are new cells containing half the genetic information of the parent and will combine with gametes from a parent of the opposite sex to create offspring … AND…, 2. Replication during Mitosis generates complete NEW CELLS within each organism for growth and maintenance. The Replication process must accurately copy each DNA strand to insure each new cell contains the correct code for making proteins that determine the characteristics of the organism. Failure to replicate properly could result in cells that are not able to produce the proteins necessary for reproduction, growth or maintenance of an organism. (Continued on next page) How Does Replication Happen? Complete DNA molecules consist of TWO Strands that form a Double Helix. The strands are connected to each other by Hydrogen Bonds. The Nucleotides in one strand of the “helix” are only able to bond with one type of nucleotide in the other strand of the helix, this is called “complimentary base pairing”. The Adenine, or “A” nucleotide can only bond with the Thymine, or “T” nucleotide. The Cytosine, or “C” nucleotide can only bond with the Guanine, or “G” nucleotide. During the Replication process, the Hydrogen Bond that connects the two DNA strands into the Double Helix is broken and the two DNA strands separate creating Two Templates that will form into new Double Helix DNA strands. Due to “Complimentary Base Pairing” that will only allow an “A” nucleotide to bond with a “T” nucleotide and a “G” nucleotide to bond with a “C” nucleotide, the new strands that form and bond to the separated template strands will result in two new double strands that are IDENTICAL to the ORIGINAL Double Strand before it separated and started the replication process. In summary, the replication process insures that each new double strand of DNA will contain the same code for making the proteins that determine the characteristics of the organism. This insures that the new cells will be able to provide for growth and maintenance of the organism and that the characteristics of the organism are passed along to their offspring through gametes. CONCEPT 3 – DNA serves as a template for making proteins. The sequence of the nucleotides in a DNA Strand form a Code that will lead to the production of Proteins. The production of proteins is also known as Protein Synthesis. With just 4 different nucleotides, DNA can provide codes for the production of hundreds of thousands of different proteins. These proteins will determine the characteristics of the organism. A DNA sequence that provides the Code to make a particular protein is a GENE. There may be thousands of protein codes, thus thousands of GENES in a single DNA strand. For this reason, DNA is often referred to as Genetic Code or is said to Contain Genetic Code. DNA strands, which provide the Code for making proteins, are solely contained in the nucleus of cells. Proteins are produced outside of the nucleus, in an area of the cell called the Ribosome. The code carried in the DNA strand must be transferred from the nucleus of cells to the Ribosome before proteins can be made. RNA molecules provide the means of transferring the Code from the DNA strands to the area of the cell outside the nucleus where the proteins are actually made. Each DNA strand serves as a TEMPLATE from which RNA molecules are made. The RNA molecules copy the Code from the DNA strand and transfer the Code to an area of the cell where proteins can be manufactured. (Continued on next page) In Summary, the DNA contains the code for making the proteins that determine the characteristics of an organism. However, DNA exists only in the nucleus of cells and proteins are made in an area of the cell that is outside the nucleus. The code to make proteins is transferred out of the nucleus by RNA molecules that use the DNA strand as a TEMPLATE to copy the code and transfer it to the area of the cell where the proteins are actually made. CONCEPT 4 – Proteins are substances essential to life. Proteins are responsible for virtually everything that makes up all organisms, both plant and animal. Proteins, which make up a large part of all living cells, determine the characteristics of organisms and allow all organisms to function, grow, heal, survive and reproduce. There are literally hundreds of thousands of different proteins that combine to create the characteristics of all organisms and then sustain those organisms in life. All proteins have a specific function but many proteins may provide similar functions as a group. Different classifications of proteins include: Catalysts – Proteins that speed up chemical reactions Nutrients – Proteins that support growth and maintain overall general health Storage – Proteins that create fats and build muscles Contractive – Proteins that facilitate movement Defensive – Proteins that support the immune system Regulatory – Proteins that maintains body chemistry, such as glucose levels Structural – Proteins that generate or replenish structural matter such as skin, bones, hair, Muscles, tissue, nails, etc. Other “Unique” Proteins that serve a single specific function in maintaining life or health CONCEPT 5 – Mutations in DNA result in changes in proteins that can be advantageous, detrimental, or neutral (have no effect) to individual organisms and their species. DNA replication, transcription and translation are occurring in the cells of living organisms every second of every day. Most of the time, these processes occur without any problems and the Gametes that result from Meiosis or the complete new cells that result from Mitosis are identical copies of the genetic information contained in the “parent” cells. However, with the volume of replications that are occurring continuously, mistakes can and do happen and these mistakes result in cells that contain DIFFERENT DNA CODE SEQUENCES than the parent cells. These mistakes are called MUTATIONS. Mutations can result from mistakes during the replication, transcription and translations processes and they can also result from other natural factors such as exposure of cells to radiation or other environmental factors such as chemical toxins that exist in cigarette smoke or toxic wastes that may be released into the environment. (Continued on next page) Once a mutation in the DNA CODE SEQUENCE has occurred, this mutation will be present in all future cells that replicate from the mutated cell. This results in a group of mutated cells within an organism which may, or may not affect that organism. Cancer is an example of mutated cells that rapidly and continuously grow into a large group of mutated cells that have definite adverse effects on the health of the organism. Mutations that occur during the replication process of Meiosis will result in gametes that contain the mutation and can therefore be passed along to offspring. These mutations add to the potential for variation in the species and can also lead to the evolution of a new species when the mutation actually helps the offspring to survive in a particular environment. For example, a mutation that resulted in an offspring having longer claws might help that offspring catch food and survive more easily than offspring who do not have the mutation. This would increase the probability that the mutated offspring would live to reproduce and pass the longer claws gene on to its offspring. This demonstrates how natural selection leads to evolution of a species that is more adapted to its environment. In Summary, mutations occur frequently. In fact, complex organisms, such as humans, may contain many mutations in their cells. Some mutations may be caught and corrected by naturally occurring protective proteins within the organism while other mutations may have no adverse effects on the organism. Mutations that occur during MITOSIS only affect the individual who has the mutated cells. Mutations that occur during the MEIOSIS process result in gametes with mutations and these can be passed along to offspring. Mutations in offspring can simply result in minor differences between the parent and offspring, or, they can result in potentially deadly genetic diseases, or even new traits that might support evolution of the species through natural selection. A favorable mutated trait that improves the survival of the offspring over time, allows that favorable trait to be passed along from generation to generation may result in the evolution of the species into a new species with the improved trait. CONCEPT 6 – Similarities in DNA show relatedness of organisms. Advances in DNA technology now allow scientists to determine the DNA sequences in organisms. These DNA sequences give scientists a great deal of information about organisms and how they may have evolved over time. DNA sequences can be used to determine how closely related organisms are. The more Base Pair Similarities organisms have in a selected DNA sequence, the more closely related the two organisms are. Scientists can use the comparisons of Base Pair similarities to help develop theories about ancestral lines and other evolutionary relationships. VOCABULARY (in alpha order) Amino Acids – The basic building blocks that make proteins. Chains of 3 Amino Acid molecules, which are sequenced by tRNA Anticodons, create specific Amino Acids and these Amino Acids combine to make the proteins that are vital in sustaining all aspects of life. Complimentary Base Pairing – The natural pairing of nucleotides when they bond to form the dual strand helix that makes up every complete DNA molecule. During this natural pairing process, Cytosine ALWAYS bonds with Guanine and Adenine ALWAYS bonds with Thymine. Enzymes – A special type of protein that speeds up reactions, enzymes are often referred to as “catalysts”. DNA – (deoxyribonucleic acid) – The molecules within a chromosome where genetic information of an organism is stored in the form of genetic coding. DNA coding provides the template for making all proteins that determine the characteristics of all living organisms and provide for the survival and reproduction of all living organisms. Gene – A DNA sequence of nucleotides that codes for a protein. Nucleotides – Special nitrogen based molecules that make up the DNA Strands. There are FOUR types of nucleotides, Adenine, Cytosine, Guanine, and Thymine, often referred to by the Code Letters “A”, “C”, “G”, and “T”. There are BILLIONS of nucleotides in the cells of every organism. Mitosis – The entire process involved in producing new cells in all living organisms. The process begins with DNA Replication and is followed by a cell division that results in TWO Daughter Cells that are IDENTICAL to the original Parent Cell. Mitosis is vital to all living organisms because new cells are continuously needed to facilitate growth and maintenance of the organism. Mutations – Changes that occur in the DNA Code due to mistakes that happen during the Replication process, or due to environmental influences on cells such as radiation or exposure to chemical toxins. Mutations that occur during MITOSIS remain within the effected organism. Mutations that occur during MEIOSIS can be passed along to offspring. Mutations can be advantageous, neutral (have no effect), or detrimental to organisms. Proteins – Long chains of Amino Acids held together by covalent bonds. Proteins differ from each other by the sequence and number of amino acids in each chain. The sequence of the amino acids determines the function of the protein. Proteins are responsible for facilitating most chemical reactions in organisms and are grouped in classifications based on the functions of the proteins. Classifications include: Structural, Nutritional, Storage, Contractile, Defensive, Regulatory, and other unique specialty proteins. In Humans, there are over 50,000 different proteins, each with a different function. Proteins determine all inherited traits, provide for growth, maintenance, immunity, healing, and all other vital life functions. Replication – The process in which DNA makes a copy of itself. Replication is a VITAL STEP in the MEIOSIS process that produces gametes for sexual reproduction AND in the MITOSIS process that creates new cells that allow for growth and maintenance of all living organisms. Ribosome – Area of a cell where Proteins are actually made RNA – A single strand of Nucleotides that is similar to DNA. There are Three Types of RNA and all three are necessary in the process of making proteins. mRNA – Messenger RNA – A single strand of nucleotides created by copying the code from one strand of DNA. mRNA follows the same “Complimentary Base Pairing” as the replication process with the EXCEPTION of the nucleotide Uracil replacing Thymine in the pairing process that creates the mRNA strand. mRNA carries the genetic Code from the DNA out of the nucleus of the cell and to an area of the cell where proteins are made. rRNA – Ribosomal RNA - rRNA interprets the Code carried in the mRNA strand into sections of Three Nucleotides. These sections are called CODONS. tRNA – Transfer RNA – tRNA is a COMPLIMENTARY Section to each Codon section interpreted during the rRNA process. These COMPLIMENTARY sections are called ANTICODONS. The tRNA sections pick up Amino Acids from the Cytoplasm area of the cell and assembles them into AMINO ACID CHAINS that MAKE THE SPECIFIC PROTEIN THAT IS CODED by the nucleotides in the tRNA section. SEE EXAMPLE ON THE FOLLOWING PAGE DETAILING THE PROTEIN PRODUCTION PROCESS Transcription – The copying of ONE DNA strand to make RNA. This is the First Step in the process of producing Proteins. The Single Strand of RNA that results from Transcription is called mRNA, (Messenger RNA), and it carries the DNA Code out of the Cell nucleus and to the Ribosome of the cell where proteins are made. Translation – The process of reading the code on the mRNA strand and using that code to make rRNA codons, which in turn make tRNA Anticodons that pick up amino acids from the cytoplasm of the cell and form them into Amino Acid Chains which ultimately result in the production of Proteins “HOW ORGANISMS MAKE PROTEINS” DNA in the cell nucleus provides a TEMPLATE for RNA Strands. RNA strands carry the DNA code out of the nucleus of the cell to the RIBOSOME where proteins are actually made. The RNA process that produces proteins is detailed in the example below. Reminder about “Complimentary Pairing” in the RNA process ** U replaces T in the RNA Complementary Pairing Process U always pairs with A, and A always pairs with U C always pairs with G, and G always pairs with C START – Reference the following sample “section” of DNA TACGCA First Step – Transcription of Code from DNA strand to new mRNA strand NEW mRNA Strand - A U G C G U Second Step – Translation of mRNA into rRNA – Code is “interpreted” into sections of three nucleotides each, these sections are called Codons rRNA Codons interpreted from mRNA - A U G and C G U Third Step – Translation of rRNA into tRNA – COMPLIMENTARY sections of nucleotides are created from the rRNA code, these complimentary sections are called Anticodons. tRNA Anticodons copied from rRNA - U A C and G C A Final Step – Proteins are produced according to the CODE contained in the Anticodons The Anticodons pull Amino Acids together from the ribosome area of the cell to form chains according to the code contained in the Anticodon. Each different Code causes a specific type of Amino Acid to be produced. In this example, Code UAC will produce the Amino Acid Cysteine and the Code GCA will produce the Amino Acid Alanine. Coded groups of Amino Acids, which correspond to a single genetic code in the DNA, combine to make a specific protein. These proteins will determine the characteristics of organisms, create their structure, and support their growth and maintenance. Essentially, DNA codes provide the roadmap for the production off all proteins which in turn create and support all living organisms. .