1 The nature of the plant community: a reductionist view 2 3 J. Bastow Wilson Botany Department, University of Otago, P.O. Box 56, Dunedin, New Zealand. 4 5 Andrew D.Q. Agnew Institute of Biological Sciences, University of Wales Aberystwyth, SY23 3DA, U.K. 6 Chapter 1: Plants are strange and wondrous things 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 1 24 1 From plants to communities 2 3 4 5 From plants to communities ................................................................................................... 1 1.1 Features of all land plants that predetermine their natural history .................................. 3 1.2 What is a plant community? ............................................................................................ 7 The accession of species into mixtures ................................................................................... 8 2.1 Step A, Speciation: What is a species? ............................................................................ 9 2.2 Step B, Biogeography: The species pool ....................................................................... 10 2.3 Step C, Dispersal ........................................................................................................... 12 2.4 Step D, Environmental filtering / ecesis ........................................................................ 13 2.5 Step E, Interference filtering (mainly competition) ...................................................... 16 2.6 Step F: Assembly rules .................................................................................................. 18 Geographical boundaries ...................................................................................................... 20 Concepts of the space occupied by one species .................................................................... 21 4.1 The niche ....................................................................................................................... 21 4.2 Guilds ............................................................................................................................. 24 4.3 Stratification .................................................................................................................. 26 Conclusion ............................................................................................................................ 27 25 Our aim in this book is to explore the workings of plant communities and especially the 26 forces that limit the coexistence of some species and promote the coexistence of others. We are 27 searching for generalisations that can be applied to plant assemblages, working from the bottom 28 up. We shall rarely discuss animals: this book is about plants. First we explain our view of 29 vegetation and of the plants that comprise it. 30 The landforms of the earth result from an underlying geological diversity, moulded by 31 geomorphological forces and mostly clothed with vegetation. Even in arid climates, any 32 scattering of plants intrudes and holds the human eye. Like the architectural heritage of the built 33 environment, landscape has the power to be emotionally and spiritually uplifting, or depressing. 34 Our reaction depends on our cultural history, our background experience and often current 35 fashion. We, the authors, have been able to study vegetation during our full working lives, and it 36 has been enormously rewarding and emotionally satisfying. Such studies are in some way a 37 homage to nature and to God. However, we also enjoy the application of science to the natural Wilson & Agnew, chapter 1, Plants, page 2 of 28 38 world, behoving us to seek the processes behind the vegetation that we see, to search for general 39 patterns, and to attempt the formulation of community-level theories. 40 From the beginnings of plant ecology, some scientists have concentrated on describing 41 the myriad of combinations in which species occur (e.g. Lawesson 2004). Others have used a 42 reductionist approach, examining a process by which species A affects species B, but have sought 43 no deeper generalisations. Yet others have developed theories into which they hope the world 44 will fit (see Bio 2000). Such is the complexity of plant communities that, whether the theories 45 have been primarily deductive (e.g. MacArthur 1969) or empirical (e.g. Grime 1979), all have 46 basically failed. This book is an attempt to move reality and theories closer. 47 There are plenty of theories to test, some more trivial than others, but it seems none have 48 reliable truth. Suppose we take a group of students into the field, tell them that there is a ‘theory’ 49 that species richness is higher in ecotones (boundaries) and have them sample. Will they find 50 that? Probably not. Suppose we tell them of the opposite ‘theory’ that can be found in the 51 literature – species richness is lower in ecotones – will they take community ecology seriously as 52 a science? Suppose we draw out of the hat a theory on where species evenness will be high, or 53 where the relative abundance distribution will be a particular shape; will the students find it? 54 Probably not. The only reason that students put up with this ‘science’ is that they, like us, find 55 being in the field more pleasant than being in the lab. Nevertheless, it is our duty as scientists to 56 start solving these problems. 57 We shall emphasise terrestrial vascular plants, because more is known about them, and 58 most of the processes to be found are found in them. However, it is likely that many of the same 59 principles apply to lower plants, down to macro-algae and plankton (Tilman 1981; Wilson et al. 60 1995 %689; Steel et al. 2004), and we shall take examples from any group of plants when we 61 fancy. Very rarely do we see a plant species persisting on its own even when we try to make it do 62 so in a garden or farm, so this book is about plant communities. However, in keeping with our 63 reductionist approach we start by examining the importance and nature of plants. 64 The importance of plants 65 Plants, as the dominant carbon fixers in the biosphere, control all ecosystems. The 66 terrestrial part of the biosphere is overwhelmingly vascular plant cover. Plant communities have a 67 global entropic effect. Visible light from the sun is intercepted by our planet, and is dissipated at 68 longer wavelengths into space (D.H. Miller 1981). This represents a gain in entropy, i.e. a trend 69 towards homogenization of the universe. The plant covering of the Earth increases, be it almost Wilson & Agnew, chapter 1, Plants, page 3 of 28 70 immeasurably, this entropy gain. It does this by fixing a tiny part of solar energy into organic 71 matter and, through evolutionary processes, maximising the efficiency of its utilisation 72 (Ulanowicz and Hannon 1987) so that even more energy is re-radiated as long wave radiation. 73 This is quite temporary for an individual living plant, but forests hold a long-term store of energy 74 as reduced carbon and terrestrial plant products can remain for longer in soil, peat and eventually 75 in subfossil and fossil deposits. The result is the maintenance of the oxygenated atmospheric 76 state, of no small importance to us all. In fact, the vegetation cover has multifarious feedbacks on 77 the climate (Hayden 1998). 78 Plant communities affect the rocks and soil too, exercising major geomorphological 79 controls on the earth’s land surface and landforms. They intercept precipitation and wind, damp 80 down environmental fluctuations, reduce erosional rates, affect soil formation and dominate 81 geochemical cycles (Trudgill 1977). Local and regional hydrology are profoundly affected by 82 vegetation through evapotranspiration, which reduces the amount of water available in soil and 83 the catchment outflow. Plant cover may accrue wind- and water-borne deposits and thus build 84 landscapes. Every plant affects the local environment in ways that are again multifarious (Eviner 85 and Chapin 2003). This is the ‘reaction’ of Clements (1904; 1916) and Gleason (1927). 86 Plants are also almost the sole basis for the food chain. Reichle et al. (1975) itemise the 87 four essential parts of ecosystem function as: (1) energy input in photosynthesis (‘energy base’), 88 (2) the capital of energy in photosynthetic biomass (‘reservoir of energy’), (3) cycling, especially 89 of elements, and (4) the control of the rates of these and other processes by factors such as 90 temperature and the availability of heterotrophs (‘rate regulation’). On land, green vascular plants 91 comprise almost the whole of the energy base and the resevoir of energy, and they make major 92 contributions to cycling and rate regulation. 93 1.1 Features of all land plants that predetermine their natural history 94 Terrestrial green plants are so familiar to us that we often lose our sense of wonder at 95 them, even as their features become more extraordinary as our knowledge of biology deepens. 96 We argue that: 97 1. Land plants root in the soil to obtain mineral nutrients, water and anchorage. Therefore, 98 they are sedentary, so defence from herbivores can be only by structure and chemistry, 99 not by escape. 100 101 2. This puts a selective premium on cell walls that are low in food value to herbivores, basically cellulose which is also strong enough to support cell turgor. However, cellulose Wilson & Agnew, chapter 1, Plants, page 4 of 28 102 cannot be efficiently recycled. Therefore plants almost always have to grow by the 103 replacement of modules, such as leaves. Discarded modules are a necessary byproduct, 104 comprising litter. 105 3. Because of modular growth, the number of cell divisions between generations (i.e. 106 gamete-to-gamete) is indeterminate and large. In the process of module production 107 somatic mutations can occur, so all ‘individuals’ are potentially genetic mosaics. The 108 germ cells are defined only just before the meiotic process, so they include these somatic 109 mutations. This contrasts with animals, where the germ cells are defined at an early stage 110 and migrate to the gonads (Gilbert 1997) with few cell divisions between one generation 111 and the next and hence little opportunity for somatic mutations to accumulate and be 112 passed on. 113 Another result of modular growth is movement. Motile animals move around but, having grown, 114 usually stay within approximately the same adult body, replacing organs cell-by-cell or molecule- 115 by-molecule until death. Plants are sedentary, but their organs and elements of their living 116 transport system have a limited length of useful life and must be replaced by new ones (Larcher 117 1980). The photosynthetic rate of a leaf is maximal early in its life and declines thereafter, so 118 leaves and their supporting organs are generally replaced several times during the lifespan of a 119 plant. These replacement leaves are formed distally on the stem, or on side branches. This means 120 that plants can never persist in an unchanged physical space; they must grow and in the process 121 explore and expand into new space. Even cacti must increase in size during their life (de Kroon 122 and van Groenendael 1997). This remorseless renewal of all modules of growth, the discard of 123 old dead plants as litter and exploration of new space results in disturbance to neighbours. In 124 other words: plants move, animals don’t. 125 Some colonial, sedentaryi animals are similar to plants in that they must grow to stay 126 alive: some Urochordata (tunicates), corals and Porifera (sponges). As a result they have several 127 similarities to plants. They have similar genetic characteristics. They filter water for carbon just 128 as plants can be said to be filtering water and air. The sedentary tunicates and corals have 129 exoskeletons somewhat resistant to decay and predation (tunicin and calcium carbonate 130 respectively), comparable to the epidermis of plants. However, there are differences. The 131 modules causing the mandatory growth of corals are not discarded in the way leaves are, though 132 the xylem in the heartwood of trees is retained too. Although animals that accumulate calcium 133 carbonate have profound effects on marine geomorphology and the biosphere, no animals on land Wilson & Agnew, chapter 1, Plants, page 5 of 28 134 have byproducts similar to the litter of dead waste parts produced by living plants (chapt. 2, 135 sect. 2 below). In the arthropods there is a periodically-shed exoskeleton that includes cellulose- 136 like material, but there is sufficient protein in the exoskeleton to make it readily decomposable 137 and anyway the biomass of herbivores can never approach that of the primary producers and 138 therefore cannot modify the environment of entire systems as can plants. 139 The problem of the individual 140 The problem of recognising individuals in plant populations is longstanding. It is reflected 141 in discussions of the terms biotype, genet and ramet (Harper 1977) as well as more philosophical 142 discussions of the nature of the plant individual (Firn 2004). In an annual with no vegetative 143 reproduction it is clear what an individual is. In vegetatively-reproducing plants with ramets 144 gradually becoming independent (Marshall 1996), perhaps with the clone then splitting into 145 several discrete patches (Harberd 1962), ‘individual’ has no demographic meaning. The same 146 issue arises with the apomictic offspring in genera such as Crepis (hawksbeard), Poa and 147 Taraxacum (dandelion) that are potentially identical in genotype. Another problem with applying 148 the animal ‘individual’ concept to plants is that whilst most animals are relatively constant in size 149 at any particular age, individuals of one plant genotype can differ in biomass by several orders of 150 magnitude (Harper 1977). There is some evidence that the root system of an individual genet or 151 even ramet can differentiate between roots from its own parent and other individuals of its own or 152 other species. The experimental evidence of Gersani et al. (2001) using Glycine max (soybean) 153 plants, of Gruntman and Novoplansky (2004) in Buchloe dactyloides (buffalo grass) and the 154 neurotransmission speculations of Baluska et al. (2004) are fascinating in this respect and need 155 confirmation. 156 Somatic mutations complicate the issue further. There can be mutations as Taraxacum 157 plants reproduce (King and Schaal 1990) so the apomictic offspring need not be genetically 158 identical. Somatic mutations can occur in vegetatively-reproducing plants and during growth 159 (Gill et al. 1995). Using the plant cell sizes in the classic Strasburger's textbook of botany 160 (Harder et al. 1965) with a conservative estimate of mean cambial cell length of 0.1 mm it is clear 161 that there could be of the order of 220 cell divisions between separate sectors of growth in a tree, 162 with a consequent probability of mitotic errors. Therefore, even an apparently ‘individual’ plant 163 cannot reliably be taken as a single genotype, and has to be regarded as a colony of apical 164 meristems, even a colony of apical meristem segments (Fig. 1.1). Every apex and therefore each 165 flower can be genetically unique, or perhaps every sector within an apex (Newbury et al. 2000). Wilson & Agnew, chapter 1, Plants, page 6 of 28 166 The modules of a physiological individual such as a tree also differ in their environment (e.g. 167 light intensity) and often the cause of that variation (shade, in our example) can be the individual 168 itself (self-shading). However, physiological interdependence between the modules overcomes 169 this to some extent. Litter 170 171 Fig. 1.1: A stylised dicotyledonous plant as a colony of active and inactive apices We conclude that because of vegetative reproduction and apomixis, variation in size, 172 somatic mutation and plasticity, the animal concept of ‘individual’ is not appropriate or useful in 173 plants. 174 The features we have been discussing make genetic change difficult. We must ask why 175 plants need genetic change when they can change plastically. One answer to this paradox has 176 been the controversial theory of ‘genetic assimilation’ (Pigliucci and Murren 2003): that plastic 177 changes can become incorporated into the genotype. Bradshaw’s (1973) answer was that plants 178 are genetically ‘sown into their winter underwear’, because their plastic response to an adverse 179 environmental shock would be too slow. A third answer is that they do not actually become 180 adapted genetically: Rapson and Wilson (1988; 1992) found that though significant genetic 181 differences had developed in Agrostis capillaris (bent) in southern New Zealand since it was 182 introduced in 1853, there was no sign that populations were adapted to the habitat they were 183 growing in. Perhaps genetic conservatism is a result of duplication of alleles on chromosomes 184 and of duplication of genomes (polyploidy). Of course, populations and eventually species do 185 change sometimes, giving in some cases dramatic ecotypic adaptation and eventually leading to 186 the 400,000 flowering plant species that we see today and the millions that rest in peace. Wilson & Agnew, chapter 1, Plants, page 7 of 28 187 Interaction with other trophic levels Plants are mostly autotrophic, but they interact with all other trophic levels. Since our 188 189 thrust is plant communities, we shall generally discuss this only so far as it mediates plant-plant 190 interactions. Wardle (2002) has discussed interactions with decomposers. Plants meet and usually 191 withstand challenges from herbivores and diseases, usually in two totally differing environments: 192 the relatively humid soil below ground and the comparative aridity of sunlight above ground 193 (chapts. 2 and 4). Many plants rely on animals for pollination and dispersal (chapts. 2 and 4).Top 194 carnivores will have indirect effects. Mycorrhizae are crucial for many species, and will be 195 discussed especially in chapter 2. In addition to their rôle in nutrition and water acquisition, it 196 seems that vesicular-arbuscular mycorrhizae (VAM) can restrict the development of pathogen 197 loads in their host (Larsen and Bødker 2001). Endophytic fungi and bacteria are also widespread 198 and have a multiplicity of effects on plant growth. There is usually an extensive microflora in the 199 phyllosphere and in the rhizosphere. Some plants form special relationships with ants, to which 200 we shall refer. In some plants mites inhabit small pits in leaves (domatia), and apparently protect 201 the plant against other herbivores or against pathogenic fungi (Grostal and O’Dowd 1994). This 202 brief list of interactions is surely far from exhaustive. 203 1.2 What is a plant community? To test community theories we need communities. Unfortunately it is not possible to 204 205 provide a definition of ‘community’ that includes areal extent, uniformity of environment, 206 closeness to equilibrium, etc. All sorts of species mixtures exist, in all sorts of environments, and 207 there are no discontinuities in the hierarchy of this variation. Furthermore, species mixtures are 208 constantly changing. We believe the plethora of terms that have been applied to species mixtures 209 (phytocoenose, association, nodum, etc.) are attempts to persuade vegetation ecologists that the 210 study of this aspect of the natural world can yield general statements and predictive rules, but it 211 cannot. 212 How close can we get to defining ‘plant community’? A degree of repeatability between 213 samples (i.e. quadrats) would be a useful restriction, but this again is difficult to prescribe (chapt. 214 6, sect. 2 below). We need to specify scale at some point in our argument; Gleason (1936) 215 suggested it should be one plant of a largest species but we do not feel able to insist on this.. 216 Mueller-Dombois and Ellenberg (1974) give a historical summary and agree that no rigid 217 definition is possible. However, they distinguish between conceptual communities which are the 218 abstract units of plant community classification and ‘concrete’ communities that are the actual Wilson & Agnew, chapter 1, Plants, page 8 of 28 219 plant species mixtures encountered in the field. We hope that all our discussions can be related to 220 real, actual examples of plant communities, the concrete ones, for we are not persuaded of the 221 relevance of conceptual communities. We could use the splendidly neutral and practical 222 statement of Tansley and Chip (1926) that “A plant community may be defined as any naturally 223 growing collection of plants which, for the purposes of the study of vegetation, can be usefully 224 treated as an entity.” 225 To include environmental relations, stability and change in the community, and spatial 226 contiguity we here see the plant community as: Naturally generated plant stands where the 227 environment of the individuals of one species potentially, predictably and persistently includes 228 individuals of its own and usually a restricted number of other species. This excludes mixtures 229 deliberately planted, such as a mixed shrubbery, but planted gardens and agricultural fields can 230 contain a rich weed flora and are valid objects of study. Of course, indirect human intervention 231 such as fertilisation and the release of grazers is quite acceptable: they often mimic perturbations 232 in natural communities, and in any case it is fascinating to see how a mixture of species responds 233 (e.g. Fuhlendorf and Smeins 1997; Silvertown 2006). 234 We are trying to make sense of nature, starting with a vision about plants and plant 235 communities, and looking for underlying predictability and repeatability so we can claim 236 community ecology as a science. As the great Robert MacArthur (1972) said: “To do science is to 237 search for repeated patterns”. The major difficulty for us is that we do not know what sort of 238 pattern to look for (chapt. 5 below). One issue in dealing with samples of plant mixtures is the 239 concept of phantom species. These are species present in the general area (“in the community”), 240 potentially available in samples but not actually recorded. This may be a valid concern for animal 241 communities where species at low density can be around and sometimes walk/swim/fly though 242 the sample area/volume, but happened not to be there at the recording time. This is less relevant 243 for plant communities and we follow Pielou’s (1990) suggestion: “a biological collection … 244 should be treated as a universe in its own right”, rejecting the concept of phantom species as a 245 figment of the theoretical ecologist’s imagination. 246 2 The accession of species into mixtures 247 248 249 We discuss the processes that initiate plant communities in six steps, in some developmental order: A. Speciation: Life has originated, and the species must have evolved. Wilson & Agnew, chapter 1, Plants, page 9 of 28 250 B. Biogeography: The species must be in the regional species pool. 251 C. Dispersal: The species in the regional species pool must reach the particular site. 252 D. Environmental filtering / ecesis: The species must be able to germinate/develop from its 253 propagule and then grow to reproduction under the physical environmental conditions 254 prevailing. 255 E. Productivity and biotic filtering: The species must be able to ecise and reproduce under 256 the general interference pressure from the other species present: competition etc. (chapt. 2 257 below). 258 259 260 261 F. Assembly rules: The species must withstand restrictions from the particular species or types of species present (chapt. 5 below). 2.1 Step A, Speciation: What is a species? We shall deal only peripherally with sub-specific evolution and not at all with the 262 evolution of species, but they are the first required taxonomic category above the plant. The 263 recognition, description and diagnosis of species allow us to predict much of a plant’s Species pool (metacommunity) Dispersal Challenge Niche constructed Niche available Niche unavailable No entry! Population Establishment Fig. 1.2: Pathways from the species pool to community entry. Wilson & Agnew, chapter 1, Plants, page 10 of 28 264 morphology and behaviour after the identification of a scrap (the use of ‘morphospecies’ does not 265 allow this). This predictability was the basis for the development of the science of Botany in the 266 eighteenth century, and our ability to describe the vegetation around us. Unlike with animals, 267 plant taxonomists (Stace 1989) are happy to allow species with only incomplete restrictions to 268 gene exchange. However, each species is required to have a distinct phenotype. It must therefore 269 have a unique environmental tolerance and a unique reaction on the environment, even if the 270 difference from other species is sometimes small. 271 2.2 Step B, Biogeography: The species pool 272 The plant community can, in the short term, comprise only species present in the region, 273 which is the species pool (Fig. 1.2). The pool is difficult to define and quite as difficult to 274 determine, because we never know the distances over which species have the ability to disperse 275 or the frequency of dispersal events. However, different processes do occur on different spatial 276 scales. The regional species distribution for many species comprises a metapopulation: a series of 277 populations that are partly independent but connected by occasional migration events. In practice 278 the metapopulations of many species will show similar distributions due to similar habitat 279 requirements, giving a metacommunity (Holyoak et al. 2005). It is a nice distinction as to 280 whether a disseminule arrives via long-distance dispersal or from the metacommunity hinterland, 281 and in any case the resulting processes of establishment must be similar. 282 Questions about the species pool are dependent on the time frame: how long are we 283 prepared to wait for the species to arrive? Were time the only limitation to dispersal, disseminules 284 from far and wide would arrive anywhere, 400,000 species, and clearly this does not happen. 285 Continents have very different floras. Many European tree species have failed to occupy their 286 potential ranges in spite of several thousand years in which to spread across the continent 287 (Svenning and Skov 2004). The school of panbiogeography sees many present-day restrictions in 288 distribution between and within land areas as a reflection of the geography millions of years ago 289 (Fig. 1.3), and its analyses of species distributions that have repeatedly been borne out by 290 subsequent geological discoveries (Heads 2005). Clements and Shelford (1939) agree that 291 whereas migration of propagules is common, establishment of them is “altogether exceptional”. 292 There are also restrictions on the scale of hundreds of years: Matlack (2005) modelled the 293 distribution of species in eastern USA and concluded that the frequencies of species in the 294 modern landscape was controlled by the time available for spread in the last 300 years, with 295 vertebrate-dispersed species occupying considerably more of their potential geographical range Wilson & Agnew, chapter 1, Plants, page 11 of 28 296 than other species. It is often unclear on which timescale the distribution limitation has occurred; 297 for example a gap in the distribution of Nothofagus spp. in the South Island of New Zealand (Fig. 298 1.3) has variously been correlated with geological movements (Heads 1989), the last glaciation 299 (Wardle 1980) and the current environment (Haase 1990). Therefore, the closest we can come to 300 definition is to say that over realistic time spans most members of the area’s species pool could 301 arrive, and we have to explain the restricted subset of species found in each plant community. 302 The concept of the species pool has sometimes included only species suited to the 303 environment of the habitat in question. In Europe, species have sometimes been excluded from 304 the pool using their Ellenberg ecological-tolerance rating (Ellenberg 1974). These values, 305 originally crude, have been progressively refined. Outside Europe, little information exists on 306 species tolerances for whole floras. A confounding question is whether the species pool is 307 defined before or after interference. If the species pool comprises only those species 308 physiologically able to tolerate the physical conditions at the site, it would include many never 309 found there, because of interference (Steps E and F). Many reports concerning filtering and Fig. 1.3a: Disjunct distribution (●) of the subshrub Kelleria laxa in South Island, New Zealand, interpreted as an originally contiguous distribution torn apart by tectonic movement ( ) along the Alpine Fault 2-10 million years ago and the ‘beech gap’ ( ). From Heads (1989). 310 interference assume that the species pool includes species that can tolerate the environment, but 311 cannot stand interference. However, the species lists are often taken from post-interference 312 communities and so the argument is circular. An example of this syndrome is when climate 313 change models of future vegetation are based on physiological parameters derived from 314 distributions (i.e. from the realised niches; sect. 4.1 below), and used in models as physiological 315 parameters (e.g. Sykes and Prentice 1996). Wilson & Agnew, chapter 1, Plants, page 12 of 28 316 2.3 Step C, Dispersal 317 Propagules 318 Propagule types are various. Within the angiosperms, seeds can be produced sexually 319 (after meiosis and fertilisation), apomictically (with no meiosis and no involvement by pollen) or 320 by pseudogamy (pollen is needed for seed development, and fertilises the endosperm, but the 321 embryo itself is produced apomictically). Vegetative reproduction can occur via bulbils, stolons, 322 rhizomes, layering of branches (e.g. Salix cinerea, willow tree), root suckers, etc. There is no 323 basic distinction between the apomictic seeds of Taraxacum spp. (dandelion), ‘vegetative 324 reproduction’ such as the production of Kalanchoe daigremontiana plantlets from the leaf 325 margin, the growth of an Elytrigia repens (couch grass) clone by rhizomes, the growth of a 326 Populus tremuloides (aspen) clone by root suckers and the growth of an axillary bud on a tree 327 branch to give new leaf modules. All replicate an original genotype but after many mitotic 328 divisions which can accumulate errors. 329 The immediate fate of these propagules is various. Bulbils and viviparous seeds both 330 develop as plantlets on the parent. Ramets produced by stolon or rhizome are initially dependent 331 on the parent, then for a period are physiologically independent unless a change occurs, such as 332 defoliation or shading, when ramets subsidise each other (Marshall 1996), and then become fully 333 independent as the connecting stolons/rhizomes wither. Seeds are usually dispersed by wind, 334 water or animals, although a few plants produce hypogeal seeds (i.e. belowground). Tree and 335 herb sectors behave similarly to clonal tillers with limited integration, except that there is a 336 greater tendency for branches to overtop one another competitively (Novoplansky 1996). 337 Migration 338 Dispersal is the means by which species move around the landscape. The two critical 339 considerations are the distance and frequency with which disseminules move outside their source 340 habitat, which is negatively related to disseminule size, and their potential for establishment as a 341 seedling in a new site amongst existing plants which is positively related to disseminule size 342 (Salisbury 1942). 343 Plant dispersal usually has a long tail (Fig. 1.4), i.e. it is leptokurtic, and is often best 344 fitted by a negative exponential function. That is, most dispersal of disseminules of every type is 345 surprisingly short-distance, with rare long-distance events, as Carey and Watkinson (1993) found 346 for mechanical scatter of the seeds of an annual festucoid grass and Matlack (2005) for dispersal 347 of ingested seeds. The reason is probably that most species are dispersed by two or more Wilson & Agnew, chapter 1, Plants, page 13 of 28 348 mechanisms: for example Agnew and Flux (1970) found in the Rift Valley, Kenya, that though 349 many grass disseminules had a large wing apparently adapted for wind dispersal, the longer 350 distance dispersal seemed to occur when the fruit became entangled in the coats of Lepus 351 capensis (hares). Occasionally, the direction can be towards suitable habitat, for example ants 352 dispersing seeds along their runways (Huxley and Cutler 1991). In general, the number of 353 disseminules arriving (the ‘propagule pressure’) will not matter: a smaller number will delay an 354 invasion but will not prevent it. The exception is when an Allee effect is operating. 70 Number of seeds 60 50 40 30 20 10 0 -80 -60 -40 -20 0 20 40 60 80 100 120 Distance (m) 355 Fig. 1.3. Fig. 1.4. The leptokurtic curve of dispersal: Juncus effusus seed rain around a single plant. 356 The population of dormant seeds in the soil or in aerial fruits – the ‘seed pool’ or ‘seed 357 bank’ – is a buffer against elimination of a species. This is important for an annual species in an 358 adverse year, and for species surviving through disasters such as fire. The seed pool is not only 359 local, it can have a metapopulation structure comparable to that of adults when seeds are moved 360 around by floods or large herbivores such as elephants. This can be seen as spatial mass effect 361 (chapt. 4, sect. 12 below). 362 2.4 Step D, Environmental filtering / ecesis 363 Propagule germination and establishment 364 The germination of a propagule starts phase of an invasion when it is the challenged by 365 the conditions in a new site (Fig. 1.2). Sometimes seeds germinate only when conditions arrive 366 that are more mesic than those tolerated by their parents, and these events may be rare in stressed 367 habitats. For example, many halophytes need unusually low salinity on a saltmarsh before they 368 germinate, when their more glycophytic seedlings can become established (Alexander and Wilson & Agnew, chapter 1, Plants, page 14 of 28 369 Dunton 2002). Arid land species show very precise adaptations for effective dispersal and 370 germination in the highly variable rainfall patterns found in these habitats (Gutterman 2002). For 371 example, Pake and Venable (1996) found that different species of winter annual in the Sonoran 372 Desert tended to germinate in different years, and species tended to germinate more in years that 373 turned out to give them higher reproductive success. 374 Plants of all species need to pass through a juvenile phase before becoming reproductive. 375 This part of the challenge in occupying a new site is called ecesis (Clements 1904). As Clements 376 (1916) wrote: “Ecesis is the adjustment of the plant to a new home. It consists of three essential 377 processes, germination, growth, and reproduction. ... Ecesis comprises all the processes exhibited 378 by an invading germule from the time it enters a new area until it is thoroughly established there. 379 Hence it really includes competition and other types of interference, except in the case of 380 pioneers in bare areas.”. This definition is of course far too broad, because it seems to include the 381 whole life cycle. We need to separate out the first stages for our reductionist view, so we restrict 382 ‘ecesis’ to post-germination survival, growth and establishment: the part of the species filtering 383 process that determines which species survive the initial dispersal and germination phases of 384 plant community establishment. 385 Invasion patterns 386 Invasion can be seen on all scales, from movement to and fro across 2 m within a decade 387 in links (Olff et al. 2000) to movement over thousands of years. The patterns of invasion seen are 388 much the same at any scale, and fall into three types. Phalanx invasion is dense and over a broad, 389 solid front. Guerrilla invasion comprises invasion by isolated individuals, which gradually fills in 390 the space available (Hutchings 1986). It is difficult to measure invasion processes because 391 a-priori assessment of habitat suitability is problematic. However, an example of an invasion 392 where at least part of the flora used guerrilla invasion is the advance of the herb flora of ancient 393 forest into adjacent secondary growth in Sweden, where Brunet et al. (2000) concluded that 394 distance (equivalent to time for dispersal) and the soil environment almost equally controlled 395 species composition. However, by far the most common seems to be a third type of invasion – a 396 combination of the former two – infiltration invasion in which there is occasional long-distance 397 dispersal (as in guerrilla invasion), followed by local short-range dispersal from these foci (as in 398 phalanx) (Fig. 1.5; Wilson and Lee 1989). This matches the leptokurtic / two-mechanism 399 dispersal typical of plant disseminules. It can be seen at a variety of scales, e.g. over kilometres 400 (Lee et al. 1991) to centimetres. A small-scale example occurs when most of a tussock grass’ Wilson & Agnew, chapter 1, Plants, page 15 of 28 401 tillers are produced within the leaf sheath, but a few are pushed greater distances by animal 402 hooves (Harberd 1962), an example of the leptokurtic / two-mechanism dispersal to which we 403 referred in section 2.3 above. Egler (1977) describes all these patterns, with details, though using 404 different terms. Expanding foci Guerrilla individuals g clumps 405 406 407 408 Fig. 1.5: Infiltration invasion by Olearia lyallii in the Auckland Islands. Environmental filtering No habitat holds all the available species from its hinterland pool. There are physical 409 environmental conditions, such as soil type, hydrology, climatic regimes and altitude, that 410 prevent the immigrants’ growing (Honnay et al. 2001). This has been called environmental 411 filtering or abiotic filtering (Weiher and Keddy 1995). It occurs largely during ecesis. The 412 existence of this filter is obvious. Sophisticated methods can be used to record the response 413 surface (e.g. Bio et al. 1998), but it remains what Warming (1909) described as “this easy task”. 414 In this book, we generally take the physical restrictions as given, and concentrate on those 415 community processes that control species composition. However, we need to return to this topic 416 in considering the niche. 417 Reaction 418 The physical environment is not strictly abiotic, for the receptor community can alter the 419 environment to create or close invasible sites, a process for which Clements (1904) coined the 420 term ‘reaction’: “By the term reaction is understood the effect which a plant or a community 421 exerts upon its habitat. … Direct reactions of importance are confined almost wholly to physical 422 factors” (Clements 1916). Any organism must cause reaction, though the environmental 423 modification varies from slight to major, and the causal species' autoresponse from negative Wilson & Agnew, chapter 1, Plants, page 16 of 28 424 (facilitation: Clements 1916) to positive (switch: Wilson & Agnew 1992). Reaction is the basis of 425 almost all plant-plant interactions (Clements 1904). Since Clements, other terms have been used 426 for the same effect, such as ‘ecosystem engineer’ (Jones et al. 1994), and ‘niche construction’ 427 (Laland et al. 1996). They seem to be later synonyms, but we shall sometimes use the latter when 428 discussing the niche. 429 Sometimes, the favourable microsites for establishment are gaps, but Ryser (1993) found 430 in a temperate calcareous grassland that the favourable microsites were those where the reaction 431 of established plants in the community provided shelter from frost; unvegetated gaps were not 432 colonised. Litter production is a common mode of reaction, forming the seedbed of an invader, 433 and enabling or inhibiting its germination (chapt. 2 below). 434 2.5 Step E, Productivity and biotic filtering 435 Communities develop a regime of carbon cycling, of which the autotrophic production is 436 our concern. We devote space to productivity here because it is easy to think rather loosely about 437 it. Productivity is “The potential rate of incorporation or generation of energy or organic 438 matter … per unit area …” (Lincoln et al. 1982), but there is a lot of complication behind this 439 definition: 440 441 442 443 1. Carbon is fixed from CO2 by the C3, C4 or CAM mechanisms. We suppose this is gross productivity. 2. Immediately, some of the fixed C is lost by photorespiration, though in C4 plants it is retained in the leaf, and can be re-assimilated. 444 3. Later, at night, some of the fixed C is lost by dark respiration. 445 4. The remaining C is transported to sinks at sites of cell division (secondary cambium, root, 446 shoot apex, inflorescence, etc.), where it is incorporated into cell wall tissue, storage 447 carbohydrates or cytoplasm, with shared potential fates. In this process, it can be: 448 A. Lost by respiration whilst still incorporated in soluble C compounds, etc. 449 B. Lost to aphids on the way: Heizmann et al. (2001) wrote: “during midday depression 450 of photosynthesis, a high percentage of the total C delivery was provided to the 451 leaves by the transpiration stream (83 to 91%). Apparently, attack by phloem-feeding 452 aphids lowered the assimilate transport from roots to shoots; as a consequence the 453 portion of C available to the leaves from xylem transport amounted to only 12 to 454 16%.” 455 C. Leached from leaves as soluble C compounds (Czech and Kappen 1997). Wilson & Agnew, chapter 1, Plants, page 17 of 28 456 457 458 459 460 D. Lost by roots as exudate of soluble C compounds (Kuzyakov and Siniakina 2001) and as mycorrhizal growth and respiration (Johnson et al. 2002) E. Converted into plant material mainly as cell wall. This material, with the cell contents, can be: i. Eaten by pests (vertebrates, invertebrates and pathogens). 461 ii. Removed by allogenic or autogenic damage or abscised. The amount lost varies 462 from parts of leaves to tree branches: cell walls plus modified cell contents. 463 iii. Lost at the death of tissues (wood, bark), organs (roots, leaves flowers and fruit), 464 465 or the whole plant. F. In living tissues, C in carbohydrate storage and cytoplasm can be lost by respiration as 466 the root becomes old or the leaf becomes shaded and/or old, or it can be translocated 467 with attendant respiratory costs. However, cell wall C cannot be lost this way, 468 because no autolysis of cellulose or lignin occurs within living plants. (This contrasts 469 with animal tissue, where all C is part of the labile pool except for some dermal 470 structures.) 471 In the face of this complexity there is no consensus as to what productivity is or how it should be 472 measured. Logic and simplicity would suggest that the real definition of productivity is the 473 amount of C that reaches the next trophic level, herbivores or decomposers. This top down 474 definition would comprise only E1-3 in the above schema. ‘Gross productivity’ can be measured 475 in the field through gas analysis (though this omits photorespiration: Step 2), and ‘net 476 productivity’ as this less all the later losses. Productivity is most often estimated by sequential 477 sampling. Suppose a habitat holding mature stable vegetation in an approximately steady state. If 478 we sample at one time and then resample the same area 12 months later, in many areas there 479 would be no change in the absence of climate change and apart from sampling error – neither 480 accumulation nor loss of biomass – so we would arrive at an estimate of zero productivity. This is 481 either accurate or misleadingly trivial, depending on your definition of productivity. However, all 482 systems show some seasonal development and change, and most estimates of plant productivity 483 rest on the successive sampling of harvest biomass (standing crop) during the season of maximal 484 growth (Perkins et al. 1978). This working approximation is a wild under-estimate of actual 485 productivity, yet has physical presence and ecological meaning. Actually, in much discussion of 486 productivity, e.g. in testing for a humped-back curve (Grime 1979), standing crop is used as a 487 substitute, and it is a very poor one. Wilson & Agnew, chapter 1, Plants, page 18 of 28 488 The productivity potential of a site controls what plant community develops in three 489 ways. Firstly, the readiness of the soil surface to provide sites for invasion and thus augment the 490 community: often with greater productivity more litter will be available affecting the ecesis of 491 invaders (sect. 2.4 above; chapt. 2 below). Secondly, disturbance of the community through 492 herbivory and often fire: high productivity attracts herbivory, while pronounced dry seasons 493 between productive growing seasons favour fire. However, in general these first two factors 494 affect the rate of invasion more than the eventual fate of an invasion. The third aspect is the 495 competitive status of the community: greater productivity means more competition and more 496 difficulty for additional species to establish. For example, Cantero et al. (1999) concluded that the 497 diversity of short grasslands in Argentina was affected by surrounding species pools, while that 498 of tall grasslands with more competition was not. This is the interference filter, in which a species 499 is able to tolerate the physical environment of a site, but cannot grow well enough there to 500 withstand the general level of interference present there: competition, allelopathy, etc. It is an 501 effect not specially dependent on the identity of the associates. This is the classic distinction 502 between the fundamental and realised niche (sect. 4.1 below). It is clearly a major factor, as can 503 be seen by the ready cultivation of many species in botanic gardens outside their natural edaphic 504 and/or climatic range. 505 Organisms of other trophic levels affect ecesis and reproduction (sect. 1.1 above, 506 “Interaction with other trophic levels”). A species might be able to maintain a positive population 507 growth rate without heterotrophs, but be pushed into negative growth when pathogens or 508 herbivores take their toll. This could be environmentally dependent: a potentially fatal herbivore 509 might be absent because the environment is beyond its tolerance. On the other hand, a plant may 510 be unable to reproduce because a normally subventing pollinator is beyond its environmental 511 range, and hence absent. This would be a type of assembly rule (Step F), though in this book we 512 consider only plant-plant assembly rules as such. 513 2.6 Step F: Assembly rules and micro-evolution 514 Assembly rules are "restrictions on the observed patterns of species presence or 515 abundance that are based on the presence or abundance of one or other species or groups of 516 species …" (Wilson 1999 %chapter). We discuss them in chapter 5. It is clearly a simplification 517 to take species as fixed units and we do so only to limit the scope of this book. To glimpse into 518 the world of ecotypes and micro-evolution as they affect community structure we examine the 519 work of Turkington and Harper (1979), taking plants of Trifolium repens (white clover) from Wilson & Agnew, chapter 1, Plants, page 19 of 28 520 patches of a field dominated by four different grass species. When they planted them into boxes 521 of a standardised soil sown with the four grass species, each T. repens genotype was the best 522 performer against the species from whose neighbourhood it had been taken in the field – an 523 amazingly neat result. They interpreted this as genetic coadaptation within the field. A 524 mechanism such as the quality of transmitted light is possible (Thompson and Harper 1988). 525 Aarssen and Turkington (1985 %605) performed a similar experiment in a pasture in 526 British Columbia, Canada, but using different patches/genotypes of Lolium perenne (ryegrass). 527 They obtained similar results for T. repens. However, they also examined variation within the 528 associated L. perenne and the results for it were the opposite – three of the four L. perenne 529 genotypes had their lowest competitive ability against the T. repens genotype with which they 530 had been growing in the field. This would tend to keep the grass/clover competitive abilities 531 balanced. There remains a fear that the effects were due to carry-over, i.e. maternal effects in the 532 vegetative material. Aarssen (1988) found that collecting seed rather than using vegetative 533 material (ramets) gave quite different results, which he attributed to screening of the gene pool 534 between seed and adult populations. Such screening has certainly been seen in heavy-metal 535 ecotypes, though under conditions where gene flow was high and the selective differentials 536 extreme. However, Turkington and Harper (1979) had used preconditioning periods of only 3 537 months. Evans and Turkington (1988) in Canada, collecting plants in a similar way to Turkington 538 and Harper (1979) – from below four different grass species – found morphological differences 539 between T. repens of the four origins after 4 months growth in a common garden which 540 disappeared after 27 months growth. Chanway et al. (1989) suggested that the difference between 541 T. repens material might be in the specific Rhizobium strains carried with it, not in the T. repens 542 itself. This could still be a force in structuring communities. 543 The Turkington and Harper (1979) result would have been small-scale character 544 displacement. It is almost impossible to prove that character displacement has occurred because 545 the evidence must involve comparisons between areas, and those areas might differ in other ways 546 (Strong 1983). However, some cases are suggestive. If found, character displacement would be 547 evidence that species interactions were a strong force in genetic selection, and therefore also in 548 ecological selection, implying deterministic community structure. Wilson & Agnew, chapter 1, Plants, page 20 of 28 549 550 3 Geographical boundaries The behaviour of a species at its distributional limit can be fascinating. Often the habitat 551 range of a species becomes more restricted towards its boundary. Pigott (1970) reported that near 552 the limit of Ilex aquifolium (holly) in Britain it becomes increasingly restricted to forest, and 553 Cirsium acaule (stemless thistle) at its northern limit becomes confined to southern (warm) 554 aspects. On the other hand, Diekmann and Lawesson (1999) found four potential examples where 555 species had wider ecological amplitudes towards their range margin in northern Sweden, and 556 suggested that there is such climatic stress in that region that a smaller flora is present and 557 important competitors are absent. Usually the plants are smaller and less fecund towards the 558 limit, leading to populations becoming smaller and absent from apparently suitable habitat 559 patches (Carey et al. 1995; Nantel and Gagnon 1999; Jump and Woodward 2003). Lower 560 fecundity also makes populations more sensitive to disturbance. For example, fire restricts 561 Canadian Abies balsamea (balsam fir; Sirois 1997) and Pinus resinosa (red pine; Flannigan and 562 Bergeron 1998) to islands and isolated populations at the northern edge of their ranges. In some 563 cases there is a sudden cut-off point in a species with no reduction in vigour near the limit 564 (Lactuca serriola, prickly lettuce; Carter and Prince 1985). This may not be exceptional. Griggs 565 (1914) made an early and careful observational study of Sugar Creek, in a “tension zone” in Ohio 566 where over 120 species have geographical boundaries, asking whether populations became sparse 567 or less fecund in this region. He found no consistency of behaviour, but most edge-of-range 568 species were abundant and flowered and fruited successfully up to the geographical limit, as in L. 569 serriola. Griggs could only hypothesise that competition sharpened boundaries to make them 570 abrupt. There can be many different reasons for a species’ failing to expand its distribution, 571 sometimes surprising ones. Pigott and Huntley (1981) found that the environmental filter for Tilia 572 cordata (linden) at the northern limit of its range in England was that the pollen tube could not 573 grow fast enough in the low temperature to reach the ovule, leaving a relictual population now 574 unable to reproduce by seed. 575 At present it seems that the behaviour of species at the margins of their ranges is complex 576 and unpredictable. For example, if the range limit were due to individuals being selectively 577 eliminated we might expect lower variances of morphological measurements at geographic 578 edges, but Wilson et al. (1991 %780) could find no such effect. Wilson & Agnew, chapter 1, Plants, page 21 of 28 579 580 4 Concepts of the space occupied by one species Our purpose in this book is to examine the way species fit together in a mixture. Two 581 powerful conceptual tools, developed for this purpose, are the niche and the guild. 582 4.1 The niche 583 The end point of a species' pilgrimage from the pool into a community is occupancy of a 584 niche. The niche is an old concept. Grinnell (1904) and Elton (1927) introduced the term, and 585 both used it to describe an area available within habitat space, broadly defined by physical and 586 trophic parameters. Hutchinson (1944) formalised this to “a region in n-dimensional hyperspace” 587 where the dimensions are all the environmental, resource or behavioural (e.g. phenology, 588 foraging) parameters that permit an organism to live. 589 Since Hutchinson’s overarching statement it has been tempting to regard species presence 590 as the only definition of the niche. Thus, Levins and Lewontin (1985) advocated that “ecological 591 niches are defined only by the organisms in them”. Olding-Smee et al. (2003 %book) believed 592 that for Hutchinson “a niche cannot exist without an occupant”. We see no reason to understand 593 Hutchinson thus. The crunch comes with the empty niche. Under the “the species is the niche” 594 concept “the idea of an ecological niche without an organism filling it loses all meaning” (Levins 595 and Lewontin 1985). However, the empty niche is a necessary concept in theory, especially in 596 relation to invasions. The absurdity of the “the species is the niche” is seen by observing 597 innovative invaders. Did no niche for a cactus exist in central Australia until Opuntia stricta 598 (prickly pear cactus) was introduced (Hosking et al. 1994)? Was there no niche for a cactus- 599 eating insect before the moth Cactoblastis cactorum was introduced for biological control of O. 600 stricta? Was there no niche below the saltmeadow in British estuaries until Spartina ×townsendii 601 / anglica (cord grass) created itself by hybridisation in 1887? Was there no niche for an emergent 602 tree in Bonin Island shrublands until Pinus lutchuensis (a pine from elsewhere in Japan) was 603 introduced (Shimizu and Tabata 1985)? It seems better to regard all these as empty niches that 604 were later filled. To be sure, the identification of empty niches is very hard. There must be areas 605 of hyperspace that it is impossible for plants to fill: floating in the air, growing on the ice at the 606 South Pole or growing at 100 °C in hydrothermal steam vents? 607 Tilman (1997 %81) claimed to find evidence of empty niches. In 1991 he sowed seeds of 608 up to 54 species into native grassland at Cedar Creek. Many became established. However, this 609 did not cause extinctions among the species originally present in 1991: the proportion of those Wilson & Agnew, chapter 1, Plants, page 22 of 28 610 lost was not correlated with the number of species added (r = +0.16, R2 = 2.6 %, not significant). 611 Even more interestingly, the total cover of those species present in 1991 did not decrease (r = 612 0.04, R2 = 0.16%, not significant). The R2 values are impressively low so we could conclude, as 613 Tilman did, that the added species occupied empty niches. There is a problem that the species 614 composition probably co-varied with the species richness. The use of ‘total cover’ is odd. If two 615 leaves of different species are vertically aligned, both count towards cover, and if two leaves of 616 the same species are horizontally aligned both count, but if two leaves of the same species are 617 vertically aligned only one counts. ‘Total cover’ is not a sensible concept. In this case, the ‘cover’ 618 of each species was, unfortunately, guessed. Cardboard cutouts were used to guide the guessing 619 but we do not take aids to guessing as removing the fact that cover was guessed. Philip Grime’s 620 group at Sheffield always uses objective measurements: presence/absence, local frequency, point 621 quadrats or sorted biomass as appropriate. Why can’t everyone? We mention this issue because it 622 will repeatedly mar results that we report. We shall not shirk from pointing out when the data of 623 this type are used, nor shall we use euphemisms like “estimated by eye”, because we believe this 624 practice is a blot on our science (even if we have occasionally been guilty ourselves in evil places 625 far away and naughty times forever gone). 626 The second reason for rejecting the “the species is the niche” concept is that it takes 627 species presence in the field as the de facto description of its niche, but this is affected by 628 interaction with other biota (competition, herbivory etc), introducing an imponderable set of 629 variables over space and time. It is more useful to separate biotic variables as restricting the 630 occurrence of a species to its realised niche, whereas its environmental tolerance defines its 631 fundamental niche or physiological tolerance (Hutchinson 1957). This distinction was known to 632 Tansley (1917) and Gleason (1917), though dismissed by Clements (1907) as “merely 633 migration”. The niche width of a group of species is usually considerably narrower, and hence 634 their niche overlap is less, when they are grown in an experimental mixed community than when 635 they are grown alone in the same conditions. That is, their realised niche is smaller than their 636 fundamental niche. Silvertown et al. (1999 %61) found this re-analysing data of Ellenberg’s with 637 six grass species and a water table gradient: the mean niche overlap was considerably higher in 638 the 6-species mixture than comparing monocultures, and the niche modes spread out to a range of 639 5-100 cm depth-to-water-table in the mixture compared to a range of 20-35 cm among the 640 monocultures. However, definitions become difficult because of reaction: any organism must Wilson & Agnew, chapter 1, Plants, page 23 of 28 641 alter its own environment and this may cause niche construction, potentially leading to realised 642 niches that are larger than the fundamental ones (Odling-Smee, et al. 2003). 643 The niche includes a species' developmental requirements (temperature etc.), its material 644 requirements (resources) and its relations with neighbouring species. A complete circumscription 645 of these is almost impossible, requiring knowledge of every aspect of the species' physiology and 646 life history, but two types of niche can be distinguished. The beta (β) niche is the range of 647 physical environmental conditions under which the fitness of a species is maintained (Alley 648 1985), e.g. its temperature tolerance, and therefore its potential geographical limits. It is related to 649 Chesson’s (in press) concept of ‘environment’ as a factor that does not form a feedback loop, i.e. 650 is not appreciably affected by the organisms themselves. The alpha (α) niche represents the 651 resources used within a community/site, the “‘profession’ or functional role” (Alley 1985), e.g. 652 different rooting depths. Many methods of analysis, e.g. the calculation of niche width and 653 overlap, can be used for both alpha and beta niches, and there are areas of character overlap. 654 However, when we use the niche concept we generally need either one or the other. Much 655 ecological discussion has been confused by failing to take the distinction into account. 656 657 658 The axes of the alpha niche are controlled by the morphology and physiology of the plant, its growth and its chemistry: 1. Morphology and its plasticity influence resource foraging and capture (light, nutrients, 659 water source), persistence (storage organs, wood), autogenic disturbance (through litter 660 and physical environmental effects), heat budget (convective, transpirative, radiative), 661 physical defence against herbivores (glands, hairs, thorns), pollination and dispersal 662 biology. An example of these factors is synusiae in forest, such as epiphytes and lianas, 663 and indeed stratification in almost all communities. Another example is the parasitic 664 habit. 665 2. Growth phenology as the plant's response to environmental signals comprises the 666 seasonality of growth and reproduction (pollination and dispersal). Examples are the 667 progression of flowering in temperate vegetation and leaf flushes in tropical forests. 668 3. The chemical functioning of a plant ultimately controls everything, but we may list as 669 examples phototype (C3, C4 or CAM), light requirement, mycotrophy, P sources via root 670 phosphatase exudate, N source (N2, NH4 or NO3) and chemical defence against herbivore 671 and pathogen challenge. Wilson & Agnew, chapter 1, Plants, page 24 of 28 672 4. Any of the above niche axes can influence plant/plant interactions, through interference or 673 subvention by neighbours (chapt. 2 below), for example in the morphological pre-emption 674 of soil resources, though the overgrowth of competitors and through the toxic chemical 675 countering of competition known as allelopathy. 676 677 5. Additional resources are gathered by the community. This is reaction causing niche construction. 678 Beta niche axes are the environmental features of the locality and its biota, that is to say the 679 habitat. Complexities between factors are more apparent than with alpha axes. Aspects are: 680 1. Climate delivers solar insolation, water availability, CO2 (though the latter is rarely local), 681 nutrients (when ombrotrophic), some pollination vectors and rate regulators such as 682 temperature. These interact with the chemistry below. Climate also delivers exposure to 683 atmospheric humidity, wind, aeration and snow. This affects morphology, for example as 684 a partial determinant of the Raunkiaer life form (the life form can also differ between 685 alpha niches, for example in forest stratification). 686 2. Chemical features of soils (calcareous versus non-calcareous, pH, salinity, etc.) affect 687 system function (nutrient availability, cycling); these overlap with geomorphology below. 688 In the short term, mineral nutrients are often dominant. 689 3. Geomorphology delivers allogenic disturbance and soil substrate. 690 4. Biota deliver allogenic disturbance, generalised herbivore pressure and animal pollinators. 691 There can sometimes be overlap between the concepts of alpha-niche and beta-niche in terms of 692 characters: e.g. low growth is a feature of the ground alpha-niche in a forest but also of arctic 693 plants. However, the effects are opposite: species of the same beta niche will tend to co-occur 694 because they have the same environmental tolerances; species of the same alpha niche will have 695 no such tendency to co-occur, and if competitive exclusion is operating they will tend not to co- 696 occur (Wilson, submitted). 697 4.2 Guilds 698 The ecological term ‘guild’ was coined by Drude (1885) as the German 699 ‘Artengenossenschaften’ to refer to a group of species moving from one region to another, such 700 as exotic species. It was used thus by Clements (1904; 1905) and Wilson (1989 %223). Perhaps 701 independently, Schimper (1898; 1903) used the term ‘Artengenossenschaften’ / ‘guild’ to mean a 702 synusia (e.g. stratum) in a forest. Tansley (1920) used it in the same way, writing of “guilds of 703 the same dependent life-form, such for instance as lianes”. Root (1967) ignored these established Wilson & Agnew, chapter 1, Plants, page 25 of 28 704 usages and with animal assemblages in mind re-defined the guild as a “group of species using 705 similar resources in a similar way”. This is not directly useful for plants, since almost all use the 706 same resources (the sun’s energy, water, CO2, N, P, K and minor elements). The guild is a 707 category that is intended to be ecological rather than taxonomic, and Wilson (1999) defined it as: 708 “a group of species that are similar in some way that is ecologically relevant, or might be”. It is 709 unusual to find “Or might be” in a scientific definition; it is necessary here because we hardly 710 ever known at the beginning of an investigation whether the guilds we are using are the real ones, 711 and often not at the end (but see the discussion of intrinsic guilds: chapt. 5, sect. 7.6 below). In 712 spite of the lack of precedence of Root’s usage, and the impossibility of applying it strictly to 713 plants, a similar usage can have value: a guild as a group of species that occupy similar niches. 714 Wilson (1999) pointed out that there are two basic types of guilds, corresponding to the 715 distinction between alpha-niches and beta-niches. Again, the outcomes are opposite: species that 716 are in the same beta-guild and therefore have similar environmental tolerances will generally co- 717 occur; species that are in the same alpha-guild and therefore use similar resources will tend 718 exclude each other. The species within one alpha-guild are similar in their resource use. For 719 example, within northern European forests, species that are within the same alpha-guild might be 720 the trees Tilia cordata (linden), Quercus petraea (sessile oak) and Fagus sylvatica (beech). They 721 are using similar resources: the light at the top of the canopy during the summer half-year, as well 722 as nutrients and water from the full profile of the soil. Conversely, if species are present in one 723 community that are in different alpha-guilds, they might be able to partition resources within a 724 community, so a community might tend to comprise species from several alpha-guilds. For 725 example, Tilia cordata, the hemi-parasite Viscum album (mistletoe), the liana Hedera helix (ivy) 726 and the ground herb Mercurialis perennis (dog’s mercury) would be in different alpha-guilds 727 because they use different light/support/nutritional resources, and if we found them together we 728 might see it as alpha-niche differentiation. 729 The species in one beta-guild are similar in their ecophysiology and therefore their 730 tolerance (across space or time) of environmental conditions, such as the “guilds of edaphic and 731 topographical specialists” of Hubbell and Foster (1986 %314). After a species pool has passed 732 through an environmental filter, the remaining species will be a beta guild; they have overlapping 733 beta-niches. For example, all sub-arctic saltmarsh species would be in the same beta-guild 734 because they occur in the same climatic and soil conditions. An example of species occurring in 735 different beta-guilds might be the temperate, mesic tree Tilia cordata, the subalpine Pinus Wilson & Agnew, chapter 1, Plants, page 26 of 28 736 contorta (lodgepole pine), arid land trees/shrubs of Prosopis spp. (mesquite), the tropical 737 Cinchona officinalis (quinine) and a species of mangrove. They occur in different environmental 738 conditions (climate and/or soil), so they are necessarily found apart in space or time since we 739 cannot find different external environmental conditions simultaneously at one spot. Díaz et al. 740 (1998) recorded abundances of ‘plant functional types’ (PFTs) of 100 species along a climatic 741 gradient in Argentina and found that vegetative traits differed between climatic zones, 742 demonstrating that beta-guilds are filtered out from the available species pool. The species within 743 each zone will almost certainly belong to different alpha-guilds. 744 The concept of ‘functional type’ (used above by Diaz et al. 1988) and that of the ‘guild’ 745 can be essentially identical (Wilson 1999; Blondel 2003). The current use of PFTs as the 746 predicted variate in models assumes that we know the characters of the types are trying to 747 summarise. In spite of the term ‘functional’ which implies alpha-guilds, most workers have 748 apparently intended to create beta-guilds. However, the characters they have chosen have often 749 been alpha-niche ones. For example, Kleyer (2002) formed guilds (‘functional types’) “to relate 750 unique PFTs to landscape specific habitat factors and to generalize syndrome-environment 751 relations across landscapes” and used characters such as annual versus biennial versus perennial, 752 plant height, regeneration from detached shoots, having leptophyllous leaves, longevity of seed 753 pool that are as likely to occur within a community. A distinction between ‘response’ and ‘effect’ 754 guilds obscures the issue, because there is far more to the alpha-niche of a species than its 755 reaction (effect) on the environment. This situation has arisen from a failure to consider the 756 purpose of the guilds being formed, what type of guilds they will therefore be – alpha or beta – 757 and what characters are therefore appropriate. 758 4.3 Stratification 759 The most obvious alpha-guilds in plant communities are the guilds of Schimper (1898; 760 1903), synusiae (Fig. 1.6). Almost all plant communities are structured vertically. Aboveground, 761 the greater the vegetation cover, the more uniform and predictable is the vertical change in 762 microclimate. Highly structured forests have a stratum of separated, emergent trees, a more 763 continuous upper canopy, then sub-canopy trees, shrubs, tall herbs, creeping herbs and 764 bryophytes, lianas and epiphytes (including lichens, bryophytes and higher plants). This 765 represents specialisation to the attenuation of light, water, CO2 and nutrient resources. All this is 766 accepted for forests, but there is also complex stratification in grasslands, for example in the wet 767 grasslands of Tierra del Fuego (Díaz Barradas et al. 2001) and even in lawns (Roxburgh et al. Wilson & Agnew, chapter 1, Plants, page 27 of 28 768 1993 %699). Naturally all stratification by primary producers is echoed by stratification in 769 consumer communities. Fig. 1.5: Stratification: profile of a rain forest in British Guiana. From Richards (1964). 770 771 We might expect that similar patterning is happening below ground because litter is 772 deposited on the soil surface eventually adding to the water-holding capacity and mineral nutrient 773 status of the upper soil. Most water arrives at the soil surface and percolates down, acidified by 774 organic acids and CO2, hydrolising the mineral fragments in the soil and most importantly 775 releasing phosphate. Plant roots and respiration can affect this, for example releasing acids. 776 Water in deep soil, including artesian water, is available to deep roots and may rise up by 777 capillarity and hydraulic lift. This can lead to stratification of root systems. Succulents of New 778 and Old World deserts have surface roots adapted for the uptake in ephemeral rainstorms 779 (Whitford 2002). Dodd et al. (1984) surveyed 43 woody species from the open woodland in SW 780 Australia, and Timberlake and Calvert (1993) 96 shrubs and trees of Zimbabwe woodlands, both 781 finding that there were indeed species with consistently shallow systems and others with deep 782 taproots. Most species had both lateral superficial roots and descending taproots, but herbs can be 783 shallow-rooted and in herbaceous or mixed herbaceous/woody communities there can be 784 considerable stratification (Weaver and Clements 1929 %p213; Cody 1986 %381). 785 5 Conclusion 786 787 This opening chapter has described the basic material of plant communities: the plants themselves. We argued that the characteristics of plants are that they are colonies of modules that Wilson & Agnew, chapter 1, Plants, page 28 of 28 788 must constantly be replaced causing movement in space, they are potentially genetic mosaics and 789 they are plastic. As a consequence, the term ‘individual’ usually has no meaning for plants. They 790 also have features that make their evolution different from that of animals. The huge majority of 791 stands have more than one plant species, and we have outlined the basic processes through which 792 multi-species communities establish and develop. The occupancy of a niche is axiomatic in a 793 species’ presence in a community, and the interactions between pool, dispersal and niche are all 794 important in this process (Fig. 1.2). There are recent demonstrations of this at a large scale in the 795 Palm floras of Ecuador and Peru (Vormisto et al. 2004), and at an intermediate scale in the 796 Netherlands (Ozinga et al. 2005). Our conclusion, which we hope the reader shares, is that there 797 is enormous complexity in the life of plants in spite of the simplicity implied in their common 798 sedentary habit and modular structure, and their almost universal trophic function. Our basic 799 concern in this book is to examine how the species fit together to form communities and basic 800 concepts for this are the niche and the guild. In the next chapter we examine the processes 801 involved when one species interacts with another, starting community development. 802 ILLUSTRATIONS 803 Fig. 1.1: The plant as a colony of active and inactive apices 804 Fig. 1.2: Pathways from the species pool to community entry 805 Fig. 1.3: Disjunct distribution of Kelleria laxa in South Island, New Zealand, interpreted as an 806 originally contiguous distribution torn apart by movement along the Alpine Fault 2-10 807 million years ago. From Heads (1989). 808 Fig. 1.4: Infiltration invasion by Olearia lyallii in the Auckland Islands. After Lee et al. (1991). 809 Fig. 1.5: The leptokurtic curve of dispersal: Juncus effusus seed rain around a single plant. 810 Fig. 1.6: Stratification: profile of a rain forest in Guiana: From Richards (1964). i ‘sessile’ in zoological terminology