How to create a program on the Paradigm plate reader Step 1. Ensure the PC and plate reader are on, if there is a yellow light on the plate reader it is in STANDBY. Step 2 From the Windows Start menu, select Programs | Beckman Coulter | Multimode Analysis Software | Multimode Analysis Software. The Multimode Analysis Software window displays. Do you already have a protocol? YES go to “How To Run a Program on the Paradigm” Step 3 Select protocols. Click from the navigation pane. This will display a list of all from the tool bar. Step 4 There are two options for creating protocols, New Protocol and Template Protocols. To create a new protocol select the New Protocol tab and continue to step 5. To create a protocol using a template protocol see Creating a Protocol from a Template on page 7-187. Step 5 Select the Protocol Type: Analysis - Analysis applications allow measurement data to be transformed and analyzed using formulas, variables, and parameters configured in the protocol. Quantitation - Quantitation applications measure the purity and/or concentration of proteins or nucleic acid samples, such as DNA or RNA. Step 6 Click Next to configure the protocol. Protocol name, enter a unique name for the protocol. Duplicate protocol names are not permitted. Notes, enter a description for the protocol, if desired. 3. Select the desired Analysis Options for configuration in the protocol: Variables - define up to ten numeric values that may be used in any formula configured in the protocol. NOTE The Variables option is only available for Analysis applications. Transformation - configure an algebraic formula to transform measurement data Concentration - values or formulas for quantitation of sample concentration with a standard curve. Cutoff - configure cutoff formulas to classify measured samples according to defined cutoff values. Click Next to select the Technique Type Step 7 Technique Type, select the desired measurement technique(s). Multiple techniques may be selected to create protocols using different detection techniques. Click Next to select the Labware Type Step 8 Select the desired Type of Labware from the list. Click Next to configure the Labware Layout Settings (for layout settings see page 7-145 Multimode Software User’s manual on sharepoint). Step 9 Click Next to configure detection and preparation methods, see page 7-150 Multimode Software User’s manual on sharepoint). Step 10 Click Next to configure data reduction methods, see page 7-169 Multimode Software User’s manual on sharepoint).