Mastering Concepts 3.1 1. Why are cells, not atoms, the basic units of life? A cell is the smallest unit of life because it is the smallest unit that can carry out all of the functions of life. An atom is smaller than a cell, but an atom is a single particle that is a component of all matter, living and nonliving. 2. How have microscopes advanced the study of cells? Microscopes led to the discovery of cells, allow us to differentiate between prokaryotic and eukaryotic cells, allow us to study the organelles inside a eukaryotic cell, and even let us watch some basic cell functions as they occur. 3. What are the original components of the cell theory, and what parts of the theory came later? The two original components of cell theory are that all life is made of cells and that cells are the fundamental unit of life. A third component, added soon after the original formulation of the theory, is that all cells come from preexisting cells. More recently, cell theory incorporated the ideas that all cells have the same basic chemical composition, use energy, and contain DNA that is duplicated and passed on as each cell divides. 4. Rank the three main types of microscopes from lowest to highest potential magnification. From lowest to highest magnification, the order is light microscope, then scanning electron microscope, then transmission electron microscope. 5. Which molecules and structures occur in all cells? All cells have DNA, proteins, RNA, ribosomes, a watery cytoplasm, and a cell membrane. 6. Describe adaptations that increase the ratio of surface area to volume in cells. Adaptations that increase the surface area to volume ratio include elongated or flattened cell shapes. An efficient transportation system, a water-filled vacuole, and improved efficiency help cells sidestep surface area limitations. 3.2 1. How do prokaryotic cells differ from eukaryotic cells? Prokaryotic cells lack a nucleus and other membrane-bounded organelles, have chemically unique cell walls, and are typically much smaller than eukaryotic cells. 2. Compare and contrast bacteria and archaea. Bacteria and archaea are small cells that lack nuclei and membrane-bounded organelles. The two groups differ in the composition of the cell wall and the lipids in the cell membrane. 3. What is the relationship between cells and organelles? Eukaryotic cells contain specialized membrane-bounded organelles that carry out specific functions. 4. How do organelles contribute to efficiency in eukaryotic cells? Organelles concentrate the biochemicals needed for chemical reactions so that the reactions proceed more rapidly. Also, because of organelles, a eukaryotic cell can maintain high concentrations of each biochemical only in certain areas, not throughout the cell. 3.3 1. Chemically, how is a phospholipid different from a triglyceride? A phospholipid has two fatty acids and a phosphate group attached to a glycerol, whereas a triglyceride has three fatty acids attached to a glycerol. 2. How does the chemical structure of phospholipids enable them to form a bilayer in water? The hydrophilic heads make contact with water while the hydrophobic tails avoid water. When many phospholipids join, the hydrophilic heads and hydrophobic tails align, forming a bilayer. 3. Where in the cell do phospholipid bilayers occur? Phospholipid bilayers occur around organelles within the cell and form the plasma membrane. 4. What are some functions of membrane proteins? Transport proteins move substances into and out of cells; enzymes facilitate chemical reactions; recognition proteins on cell surfaces allow the body to recognize its own cells; adhesion proteins allow cells to stick together; receptor proteins bind molecules to the outside of the cell and trigger chemical reactions inside the cell. 5. How does a cell membrane differ from a cell wall? A cell membrane is a delicate phospholipid bilayer with selective permeability. All cells have a membrane. A cell wall is a rigid structure that surrounds the cell membrane of some cells. 3.4 1. How do organelles help eukaryotic cells compensate for a small ratio of surface area to volume? One way to compensate for a small ratio of surface area to volume is to use resources and energy efficiently. Thanks to specialized organelles, a eukaryotic cell produces high concentrations of biochemicals only in certain areas rather than producing them throughout the cell. 2. Which parts of the cell interact to produce and secrete a complex substance such as milk? The nucleus, ribosomes, smooth ER, Golgi apparatus, vesicles, and cell membrane interact in the production and secretion of milk. Mitochondria provide the energy necessary to make the process happen. 3. What is the function of the nucleus and its contents? The nucleus contains DNA (the molecule that contains the instructions for making proteins) and the nucleolus (where ribosomes are assembled). mRNA molecules also are produced in the nucleus, although they exit through nuclear pores before participating in protein production. 4. Which organelles are the cell’s “recycling centers”? Lysosomes, vacuoles, and peroxisomes are the cell’s recycling centers. 5. How are the functions of plastids essential to the life of a plant cell? Chloroplasts are plastids that carry out photosynthesis. Other plastids store pigments or food, or they help a plant to detect gravity. 6. Which organelle houses the reactions that extract chemical energy from nutrient molecules? Mitochondria house the reactions that extract chemical energy from nutrient molecules. 7. Which three organelles contain DNA? The nucleus, chloroplasts, and mitochondria all contain DNA. 3.5 1. What are some functions of the cytoskeleton? The cytoskeleton provides a structural framework for the cell, is a transportation system within the cell, allows the cell to move, and connects cells to one another. 2. What are the main components of the cytoskeleton? The major components of the cytoskeleton are proteins that assemble into microfilaments, intermediate filaments, and microtubules. 3. Why are flagella and cilia important? Unicellular organisms may use either flagella or cilia to move toward food or other resources. In humans, sperm cells have flagella, and cilia sweep substances along the respiratory tract and the female reproductive tract. 3.6 1. What are the three types of junctions that link cells in animals? Tight junctions, anchoring junctions, and gap junctions link cells in animals. 2. What are the functions of a cell wall? A cell wall imparts shape, regulates cell volume, and prevents a cell from bursting if it takes in too much water. Cell walls also participate in plant cell differentiation. 3. What is the chemical composition of a plant cell wall? Plant cell walls are made mostly of cellulose but also contain hemicellulose, pectin, and many types of proteins. 4. What are plasmodesmata? Plasmodesmata are tunnels through the cell wall; each plant cell can communicate with its neighbors via the plasmodesmata. 3.7 1. How did the researchers determine that both magnetism and oxygen guided bacteria movements? The researchers devised an experiment in which bacteria in small glass tubes were free to select their optimal O2 concentration while the researchers manipulated the magnetic field. Wherever they were in the tube, the bacteria turned toward the magnetic field, but they did not always swim in the same direction (as one might expect if the magnetic field alone determined the direction of movement). Instead, they remained where the oxygen concentration was optimal. 2. How do magnetosomes help bacteria save energy? In their natural ocean habitat, Earth’s magnetic field lines are vertically oriented, so they help the bacteria determine which direction is “up.” The optimal O2 concentration is in a roughly horizontal layer of water. By swimming only up and down, not in random directions, they can save energy as they search for the optimal O2 concentration in the water column. Write It Out 1. How does the formation of the cell theory illustrate the process of science? Schleiden and Schwann integrated their own observations with those of many other scientists as they developed their theory, which at first had two parts. Virchow added a third component in 1855, and the theory has expanded further since that time, illustrating that scientific theories are subject to change. The cell theory includes many testable predictions and although it is potentially falsifiable, all observations to date have supported the theory. 2. List the features that all cells share, then name three structures found in eukaryotic cells but not in bacteria or archaea. All cells have DNA, RNA, protein, ribosomes, cytoplasm, and a cell membrane. Structures found only in eukaryotic cells include the nucleus and other membranebounded organelles, such as mitochondria, chloroplasts, and the endomembrane system. 3. If a eukaryotic cell is like a house, how is a prokaryotic cell like an efficiency (oneroom) apartment? A eukaryotic cell is like a house with many different internal compartments and specialized areas. A prokaryotic cell is more like an efficiency apartment because it is smaller and has a simpler structure with fewer internal compartments. However, the apartment still carries out the same basic functions as the house. 4. List three structural differences between plant and animal cells. Explain how each structural difference reflects a functional difference between plants and animals. Plant cells have chloroplasts; animal cells do not. Chloroplasts are the organelles where photosynthesis occurs. Animals are heterotrophs and do not carry out photosynthesis. A plant cell also has a central vacuole, a sac that occupies most of the cell’s volume; animal cells do not. Turgor pressure exerted by the vacuole on the cell wall helps a plant stay upright. A plant cell has a cell wall, which provides rigidity and support. Animal cells lack cell walls and typically rely on skeletal and muscular systems for movement and support. 5. Suppose you find a sample of cells at a crime scene. What criteria might you use to determine if the cells are from prokaryotes, plants, or animals? One approach would be to look at the cells with a microscope. If they lack a nucleus, they are prokaryotic; if they contain a nucleus, they are eukaryotic. A eukaryotic cell with a cell wall is likely to be a plant cell (although it could also come from a fungus or some types of protists). A eukaryotic cell without a cell wall is likely to come from an animal (although it could also belong to a protist). 6. Rank the following in order from smallest to largest: ant, prokaryotic cell, actin molecule, microtubule, nitrogen atom. What type of microscope (if any) would you need if you wanted to see each? From smallest to largest, the order would be nitrogen atom, actin molecule, microtubule, prokaryotic cell, ant. The nitrogen atom and individual actin molecule are too small to see with any microscope. Microtubules and prokaryotic cells are best seen with an electron microscope, although they are visible with a light microscope. An ant is visible with the unaided eye. 7. Which cell in figure 3.31 has the highest ratio of surface area to volume? Explain your answer The prokaryotic cell has a higher ratio of surface area to volume. 8. What advantages does compartmentalization confer on a large cell? Compartmentalization means that a cell must maintain high concentrations of each biochemical only in certain organelles and not throughout the entire cell. Internal compartments also increase the membrane surface area available for chemical reactions. 9. List the chemicals that make up cell membranes. The chemicals in cell membranes are phospholipids, sterols, proteins, and sugars. 10. Emulsifiers are common food additives. A typical emulsifier molecule has a hydrophilic end and a hydrophobic end. Draw a diagram explaining how an emulsifier can enable oil to mix with water. Answer will be visual. Emulsifier molecules should surround a droplet of oil, with the hydrophilic end of the emulsifier facing the water and the hydrophobic end facing the oil. 11. Choose an organelle in a human cell, and imagine that a disease causes that organelle to be faulty. How would the malfunctioning organelle affect the cell’s function? Answers will vary; these are two examples. If mitochondria were affected, a cell would be unable to generate energy. If the endoplasmic reticulum were to malfunction, many other organelles (such as lysosomes and peroxisomes) would not function properly 12. One way to understand cell function is to compare the parts of a cell to the parts of a factory. For example, the Golgi apparatus would be analogous to the factory’s shipping department. How would the other cell parts fit into this analogy? The nucleus would be the management office where product orders are issued, and the ribosomes and smooth ER would be the sites of production. The forklifts would be transport vesicles carrying raw materials and products within the factory, and the power generators would be the mitochondria. The girders and steel beams that make up the structure of the building would be the cytoskeleton. 13. Why does a muscle cell contain many mitochondria and a white blood cell (an immune cell that engulfs bacteria) contain many lysosomes? Muscle cells require a lot of energy to move parts of the body; mitochondria use aerobic cellular respiration to extract energy from food. White blood cells have many lysosomes because they engulf and dispose of debris and bacteria. 14. How does the cytoskeleton interact with other structures in eukaryotic cells? Organelles can move within the cell along the cytoskeleton’s “tracks.” The cytoskeleton also protects the cell’s organelles by helping maintain the cell’s shape and resisting mechanical stress. Some components of the cytoskeleton tug on chromosomes as the cell divides. The cytoskeleton also links adjacent cells together through the cell membrane. 15. How do plant cells form cell walls? A plant cell secretes the components of its cell wall through its plasma membrane. The primary wall is the first to be secreted; it is thin and flexible compared to the secondary wall, which is thicker and tougher. The secondary wall is internal to the primary wall. 16. Describe how animal cells use junctions in different ways. Tight junctions create an impermeable seal between adjacent cells. Anchoring junctions act as “rivets” that secure cells in place. Gap junctions allow adjacent cells to exchange cytoplasmic material. Pull It Together 1. How might you connect the terms proteins and cytoskeleton? “Proteins” could connect with the phrase “make up the” to “cytoskeleton.” 2. Add the three main components of the cytoskeleton to this map. “Cytoskeleton” could connect with the phrase “has three main components, which are” to three boxes titled “Microfilaments,” “Intermediate filaments,” and “Microtubules.” 3. In what ways are domains Bacteria and Archaea different? Their cell walls and cell membranes are composed of different chemicals. They also differ in certain key genetic sequences. 4. Add the eukaryotic kingdoms to this concept map. “Domain Eukarya” could connect with the phrase “consists of” to four boxes titled “Protists”, “Fungi”, “Plants”, and “Animals”. 5. Add chloroplast, lysosome, and vacuole to this concept map. One possibility would be to connect “Organelles” with the phrase “include” to all three of these terms. Another option would be to first add “Plants” and “Animals” as kingdoms within domain Eukarya. Then, “Chloroplast” and “Vacuole” could be listed as organelles found in the cells of plants, and “Lysosome” could be listed as an organelle found in the cells of animals. 6. Which cell types have a cell wall? The cells of most bacteria and archaea have cell walls. The cells of some eukaryotes (notably plants, fungi, and some protists) also have cell walls, although those of animals do not.