AP Biology Study Guide for Ch. 1-4: Exploring Life August 2013 This is your first Study Guide for AP Biology! I am giving you a copy of this first Study Guide, but will expect you to download future Study Guides from my Teacher Page, so please visit the site and familiarize yourself with what is available to you there. (Caution: do not download Study Guides until they are updated to the current school year – 2013!) You will need to download the “Reading Guides” for Chapters 1-4 as soon as possible, so that you can start reading the chapters and filling out the Guides. This will be your homework, along with the “Learning Targets” and “Key Vocabulary” below. It probably seems like a lot of work (and it is!), but if you are organized and budget your time, YOU CAN DO IT! You must shoulder the responsibility of reading and learning this information. Be organized BEFORE the exam: buy or make yourself a daily planner and keep track of when you’re going to work on assignments, read the textbook, update your AP Biology Notebook, make and study flash cards, read and later reread handouts, etc. The most successful students study four or five hours per week. In college the formula is that each hour of class time equals two hours of study time! Wow! Chapter 1 in your book is an introduction to the major themes in biology. The information should be a review. Chapters 2 & 3 are reviews of basic chemistry and the structure and special properties of water. Luckily, we don’t have to know a whole lot of chemistry to do well in AP Biology, but the information in these chapters is essential, so make sure you master it. ELT provides a great opportunity to come in and work on topics if you are confused!! “Work together” on this by quizzing each other with flashcards. If you haven’t taken chemistry, find a “buddy” who has and let him/her explain concepts to you—he or she will benefit from teaching you the material and you will probably find out that chemistry isn’t so hard after all! Chapter 4 is very short, but also very important because without understanding Chapter 4, you won’t be able to understand Chapter 5, which is SUPER IMPORTANT! Here we go with the memorization: you must KNOW (i.e. be able to recognize a picture of and name OR be able to sketch if given the name) the structures of a hydrocarbon (methane, ethane) and all of the functional groups on pp. 64-65. Chapters 2, 3 & 4 in your book are what the College Board refers to as “underlying content.” It won’t be on the AP Exam, but it is necessary in order to understand a particular required concept. I. SCHEDULE 2013 for Chapters 1-4 Monday (8/26) Tues *Welcome to AP *Pre-lab Investigation Biology! 12-Animal Behavior *Hand out: Lab Safety HWK:Bring rolieRules/Contract, polies on block day Academic Honesty next week!!!! Code, College Board *Lecture Ch. 1 Outline, Study Guide Ch. 1-4 Wed *Lab-M&M Statistics-A Chi Square Analysis *Set up website access Fri *Lab Safety Test *Lecture Ch. 1 1 Monday (9/2) *LABOR DAYNO SCHOOL! Tues *Lecture Ch. 2 Wed *Investigation 12-Animal Behavior (Pre-lab DUE!) Monday (9/9) *Lecture Ch. 2 Tues *Lecture Ch. 3 Wed *Lecture Ch. 3 & 4 *FRQ DUE *Assign FRQ (due 9/18) *ELT Review Thursday Fri *Finish Investigation 12Animal Behavior & assign due date *Assign FRQ (due 9/11) Fri *Exam Ch. 1-4 *Packet DUE *Download Study Guide and Reading Guide Ch. 5 II. KEEP IN MIND 1. The Chapter 1-4 Packet will consist of your completed Ch. 1-4 Reading Guides and your completed Learning Targets (below), and your “Fred & Theresa Guides” which we will complete in class. All of this work must be done in YOUR handwriting; no word-processed work will be accepted. Feel free to “re-do” your Learning Targets or any other assignments by word processing them if that helps you to learn, but I will only collect hand-written work. You should make flashcards of the Key Vocabulary and STUDY them until they are MEMORIZED. I will collect and grade your flashcards on the day of the test. 2. FLASHCARDS are the most awesome thing ever invented by humankind!! If you haven’t started using flashcards yet, get with the program now! Flashcards are used by successful college students and are essential to success in a college biology course. Medical students are notorious for making complex sets of flashcards to memorize all of the detailed anatomy, pharmacology, pathology, etc. that they are required to know. 3. Your “Packet” work is worth points, BUT this is not the main reason you should do your work! You should do this work FOR YOURSELF! You should do this work so that you will learn this material and succeed on the test. Don’t do this work for points, do it for YOUR learning! DO NOT CHEAT on these assignments by copying other students’ work or by splitting up the assignments and then copying! IT’S NOT WORTH IT and you will not do well in this class. 4. Your Learning Targets will often have more than one part or question to answer or explain or describe. Be sure to answer ALL PARTS of the Learning Targets thoroughly, because they are ALL important. I promise I won’t give you busy work; all of your Key Vocabulary and Learning Targets are things you MUST KNOW in order to succeed in AP Biology. 5. It would be a good thing (but not required) to make flashcards of the Word Roots I have given you (below). Memorizing the meaning of these roots will help you in this class and will probably make your English teachers really happy, too! 2 III. KEY VOCABULARY Chapter 1 bioinformatics controlled experiment ecosystem emergent properties hypothesis population reductionism biosphere data domain Archaea eukaryotic cell inductive reasoning positive feedback system community deductive reasoning domain Bacteria gene inquiry producer systems biology consumer deoxyribonucleic acid domain Eukarya genome negative feedback prokaryotic cell theory bio- life (biology: the scientific study of life; biosphere: all the environments on Earth that are inhabited by life; bioinformatics: using information technology to extract useful information from large sets of biological data) eu- true (eukaryotic cell: a cell that has a true nucleus) -ell small (organelle: a small, formed body with a specialized function found in the cytoplasm of eukaryotic cells) pro- before; karyo- nucleus (prokaryotic cell: a cell that has no nucleus) IV. LEARNING TARGETS Chapter 1 Exploring Life on Its Many Levels 1. 1. Diagram the hierarchy of structural levels in biological organization. 1.2. Distinguish between prokaryotic and eukaryotic cells. 1.3. Describe the basic structure and function of DNA. 1.4. Explain the importance of regulatory mechanisms in living things. Distinguish between positive and negative feedback. Evolution, Unity, and Diversity 1.5. Explain the phrase “life’s dual nature of unity and diversity.” 1.6. Describe the observations and inferences that led Charles Darwin to his theory of evolution by natural selection. 1.7. Explain why diagrams of evolutionary relationships have a treelike form. The Process of Science 1.8 . What is inquiry and how does it relate to the process of science? 1.9. Distinguish between quantitative and qualitative data. 1.10. Distinguish between inductive and deductive reasoning. 1.11. Explain why hypotheses must be testable and falsifiable but are not provable 1.12. Describe what is meant by a controlled experiment. 1.13. Distinguish between the everyday meaning of the term theory and its meaning to scientists. V. KEY VOCABULARY Chapters 2 & 3 atom proton atomic number isotope orbital ion atomic nucleus neutron mass number electron half-life ionic bond 3 electrostatic attraction ionization acid pH nonpolar covalent bond electronegativity hydrophobic van der Waals interactions surface tension heat capacity Word roots: valence molecule base buffer polar covalent bond hydrogen bond hydrophobic interactions hydrophilic capillarity heat of vaporization an- = not (anion: a negatively charged ion) co- = together; -valent = strength (covalent bond: an attraction between atoms that share one or more pairs of outer-shell electrons) electro- = electricity (electronegativity: the tendency for an atom to pull electrons towards itself) iso- = equal (isotope: an element having the same number of protons and electrons but a different number of neutrons) neutr- = neither (neutron: a subatomic particle with a neutral electrical charge) pro- = before (proton: a subatomic particle with a single positive electrical charge) VI. LEARNING TARGETS Chapters 2 & 3 2.1. Describe and diagram the structure of an atom, using the terms proton, neutron, electron, mass number (atomic mass), and orbital. Indicate what is meant by electrons in an "excited state" and those in a "ground state." 2.2. Explain what an isotope is and give two important physical properties of isotopes that make them useful for biological research. Describe what is meant by the "half-life" of a radioactive isotope. 2.3. Using diagrams, explain what an ion is, and how it forms. Describe an ionic bond. Indicate whether, and why or why not, sodium chloride exists as a molecule when in solution.. 2.4. Describe a covalent bond and explain how it differs from an ionic bond. Relate the structure of an atom to its chemical properties and the type of chemical bond it forms. 2.5. Using diagrams, explain the difference between nonpolar covalent bonds and polar covalent bonds. In a molecule like the following, indicate which of the bonds marked by arrows are polar covalent bonds and which are nonpolar covalent bonds. H | H-C-O-H | H-C-H | H 2.6. Indicate why the inorganic molecules O2 and CO2 are basic to life, and name the principal source of each of these molecules. 2.7. Explain the crucial role of weak chemical bonds (such as hydrogen bonds, van der Waals interactions, and hydrophobic interactions) in the organization of living materials. 3.1. Describe the special physical properties of water. In doing so, draw two water molecules in a way that illustrates a hydrogen bond; specify the number of hydrogen bonds a single water molecule can form with 4 other water molecules in ice; explain why water is a good solvent for ionic and polar compounds, but not for hydrophobic substances; and show the basis for the high surface tension of water and for capillarity. 3.2. Explain what is meant by pH. Specify the pH of the material within most living cells and indicate whether this is acidic or basic. Describe what happens if the pH changes appreciably from this value. Give the name used for compounds that resist changes in pH. Describe how buffers work and give an example of a buffer system. VII. KEY VOCABULARY Chapter 4 hydrocarbon functional group Word Roots isomer amino group carb- coal (carboxyl group: a functional group present in organic acids, consisting of a carbon atom double-bonded to an oxygen atom and a hydroxyl group) enanti- opposite (enantiomer: molecules that are mirror images of each other) hydro- water (hydrocarbon: an organic molecule consisting only of carbon and hydrogen) iso- equal (isomer: one of several organic compounds with the same molecular formula but different structures and, therefore, different properties) sulf- sulfur (sulfhydryl group: a functional group that consists of a sulfur atom bonded to an atom of hydrogen) thio- sulfur (thiol: organic compounds containing sulfhydryl groups con- together (condensation reaction: a reaction in which two molecules become covalently bonded to each other through the loss of a small molecule, usually water) di- two (disaccharide: two monosaccharides joined together) glyco- sweet (glycogen: a polysaccharide sugar used to store energy in animals) hydro- water; -lyse 5 break (hydrolysis: breaking chemical bonds by adding water) macro- large (macromolecule: a large molecule) meros- part (polymer: a chain made from smaller organic molecules) mono- single; -sacchar 5 sugar (monosaccharide: simplest type of sugar) poly- many (polysaccharide: many monosaccharides joined together) tri- three (triacylglycerol: three fatty acids linked to one glycerol molecule) VIII. LEARNING TARGETS Chapter 4 4.1. Name and diagram the functional groups listed in Table 4.10 (pp. 65-66). Indicate whether each group is charged, polar, or nonpolar, and whether it is hydrophilic or hydrophobic. 4.2. Define isomer and distinguish between the three types of isomers: structural isomers, geometric isomers, and enantiomers. 4.3. Describe the role of phosphate groups in the function of ATP. 5