Name ___________________ CWID_______________ MICR 2123: Final Exam (July 28, 2011) Multiple Choice Identify the choice that best completes the statement or answers the question. Each question is worth 5 points. _c_ __ 1. Cells that have the ability to take up DNA from their environment are said to be : a. b. c. d. e. Hfr cells mutants cells competent cells transducing cells healthy cells _a__ __ 2. A bacterium capable of producing methane from carbon dioxide and hydrogen performs a type of metabolism called __________ and, given its sources of electrons, it is a __________. a. methanogenesis; lithotroph b. respiration; heterotroph c. fermentation; organotroph d. carbon fixation; phototroph e. none of the above _d_____3. Which of the following statements is correct with respect to heterotrophic organisms? a. they use an organic compound as a carbon source but not energy source. b. most organotrophs are also heterotrophs. c. they derive both carbon and energy from an organic compound. d. all of the above. e. none of the above. _a_____4. In many bacteria, the electron carrier __________ is used in biosynthesis, whereas __________ feeds the electron transport system for energy. a. NADPH; NADH b. FADH2; NADPH c. NADH; acetyl-CoA d. all of the above e. none of the above _e_____5. Which of the following is not necessary for respiration to occur in microbes? a. Electron donor b. NADH c. Cytochromes d. quinone e. oxygen _b_____6. Growth of most microorganisms occurs by: a. budding b. binary fission c. replication d. conjugation e. Transformation 1 Name ___________________ CWID_______________ _b_____7. __________ enters the TCA cycle by condensing with oxaloacetate. a. Succinoyl-CoA b. Acetyl-CoA c. Pyruvate d. Citrate e. Isocitrate _c_____8. The greatest amount of NADH is produced during which stage of aerobic respiration? a. glycolysis b. pyruvate conversion to acetyl-CoA c. TCA cycle d. Entner-Doudoroff Pathway e. none of the above _d_____9. What is lithotrophy? a. breakdown of molecules using light energy b. oxidation of organic electron donors to CO2 and H2O c. photolysis of H2O coupled to CO2 fixation d. oxidation of inorganic electron donors such as Fe2+ using O2 e. none of the above _b_____10. The region on the template DNA at which the RNA polymerase binds is the __________ region. a. leader b. promoter c. terminator d. regulator e. coding _e____11. Redox potential is defined as: a. the tendency for a molecule to release H+ in solution b. the tendency for a molecule to release OH– in solution c. the tendency of a molecule to accept electrons d. the tendency of a molecule to donate electrons e. the tendency of a molecular to either donate or accept electrons _a____12. Membrane bound ATPase synthesizes ATP when: a. protons move into the cell b. protons move out of the cell c. electrons move into the cell d. electrons move out of the cell e. none of the above statements are true _a_____13. In Gram-negative bacteria, the ETS is embedded in the: a. plasma membrane b. cell wall c. periplasm d. outer membrane e. peptidoglycan layer 2 Name ___________________ CWID_______________ _a____14. How many FADH2 are formed when one molecule of glucose is completely oxidized to CO2 via glycolysis and the TCA cycle? a. 2 b. 8 c. 10 d. 1 e. 4 _e_____ 15. Which of the following is NOT a terminal electron acceptor in anaerobic respirations? a. nitrate b. nitrite c. sulfate d. carbon dioxide e. oxygen __d_____ 16. In sediments, CO2 is reduced to CH4 by __________. a. fungi b. cyanobacteria c. E.coli d. methanogens e. none of the above _c_______17. The __________ domain lacks pathogens. a. eukarya b. bacterial c. archaeal d. protist e. monera _c_______18. Archaeal membranes contain __________ lipid side chains. a. glycoprotein b. retinal c. isoprenoid d. diether e. ester __a______19. Which of the following is unique to archaea? a. pseudopeptidoglycan b. peptidoglycan c. supercoiled DNA d. cell morphologies e. use of H2 as an electron donor _d______ 20. The Haloarchaea, extreme __________, are the only form of life to grow in concentrated salt a. thermophiles b. psychrophiles c. methanophiles d. halophiles e. acidophiles 3 Name ___________________ CWID_______________ _c______ 21. The 70S bacterial ribosome is composed of a 30S and a __________ subunit. a. b. c. d. e. 30S 40S 50S 60S 70S _a______ 22. Sulfolobus species are referred to as double __________, meaning they require high temperature and high acidity simultaneously. a. extremophiles b. thermophiles c. acidophiles d. hyperthermophiles e. thermoacidophiles _b_____23. Which of the following pairs is mismatched? a. b. c. d. e. DNA polymerase — makes DNA from a DNA template RNA polymerase — makes RNA from an RNA template RNA polymerase — makes RNA in 5’3’ direction DNA polymerase — makes DNA in 5’3’ direction None of the above are correct _b_______24. Bacteriorhodopsin absorbs light and pumps H+ __________ the cell, whereas halorhodopsin pumps chloride __________ the cell. a. into; out of b. out of; into c. into; into d. out of; out of e. through; across __b______25. Many infectious diseases display similar __________, making diagnosis difficult. a. syndromes b. symptoms c. vectors d. disease mechanisms e. modes of transmission __a_____ 26. A __________ disease is an infection that normally affects animals but that can be transmitted to humans. a. zoonotic b. herd c. fulminating d. recurrent or cyclic e. community acquired __d_____ 27. Streptococcus pneumoniae causes all of the following EXCEPT: a. meningitis b. lobar pneumonia c. bronchopneumonia 4 Name ___________________ CWID_______________ d. necrotizing fasciitis (flesh-eating disease) e. bacteremia _c______28. When the population doubles during each given unit of time, the growth is? a. linear b. semilogarithmic c. exponential d. geometric e. arithmetic _c______29. What disease is caused without an infection? a. giardiasis b. tetanus c. staphylococcal food poisoning d. candidiasis e. psittacosis _b______30. A nationwide recall of spinach in 2006 was due to contamination by cattle water containing: a. Neisseria meningitidis b. E. coli O157:H7 c. Vibrio cholerae d. Shigella species e. hepatitis A virus Figure 1 _b______31. How is ATP generated in the reaction shown in Figure 1? a. oxidative phopohorylation b. Substrate-level phophorylation c. fermentation d. photophosphorylation e. None of the above __a_____ 32. A hunter presents flu-like symptoms and has a “bull eye” rash on his leg. The appropriate diagnosis is ____? a. lyme disese b. tuleremia c. meningitis d. malaria e. measles 5 Name ___________________ CWID_______________ __d_____ 33. If you are using a microscope with a 10 ocular lens and a 100 objective, what is the total magnification? a. 10-fold b. 100-fold c. 110-fold d. 1,000-fold e. this is not enough information. _c______ 34. Bubonic plague (Yersinia pestis) is most commonly transmited by: a. rodents b. ticks c. fleas d. rabbits e. mosquito _e______ 35. a. b. c. d. e. Which of the following is a negative stain? acid-fast stain endospore stain antibody stain simple stain capsule stain Figure 2. _b _____________b_ ______ ______ ______ ______ ______ ______ ______ ______ ___ 36. Which compound is being oxidized in the reaction shown in Figure 2? a. NADH b. isocitric acid c. NAD+ d. α-Ketoglutaric acid e. none of the above are being oxidized Questions from 37 thru 48 are from Exam 1. __b_____37. You have isolated a bacterium that you believe to be the causative agent of a new disease in frogs. How would you test the third of Koch’s postulates? 6 Name ___________________ a. b. c. d. e. CWID_______________ determine the shape of the bacterial cells. inject the bacteria into a healthy frog. isolate the bacterium from a sick frog. show that the bacterium is NOT present in healthy frogs. grow a pure culture of the bacterium outside the frog. __c_____38. Resolution is best described a. b. c. d. e. the ability to view only stained specimen the ability to magnify a specimen the ability to distinguish between two closely placed objects the ability to see internal structure of a specimen the ability to view only unstained specimen ___a____39. If an object and its surroundings absorb or reflect radiation equally then the object will be: a. b. c. d. e. undetectable reflected refracted radiated fluoresced _a_____40. Three cells with generation times of 30 minutes are inoculated into a culture medium. How many cells are there after 5 hours? a. b. c. d. e. 3072 1024 243 48 16 __a_____ 41. ___________ reinforce and stiffen cytoplasmic membranes in bacteria. a. b. c. d. e. hopanoids polyamines sterols peptidoglycans lipids _b_____42. All archaeal phospholipids have a/an __________ link between glycerol and the lipid component. a. b. c. d. e. ester ether ethanolamine unsaturated phosphatidyl _d_____43. Which is NOT a component of any bacterial cells wall? a. peptidoglycan 7 Name ___________________ b. c. d. e. CWID_______________ techoic acids N-acetylmuramic acid cellulose L-lysine __c_____44. All of the following are components of peptidoglycan EXCEPT: a. b. c. d. e. N-acetylglucosamine N-acetylmuramic acid lipopolysaccharide amino acids peptide cross-links __c_____45. One of the following staining techniques will help identify bacteria that have a thick, waxy-layer in their cell wall (e.g. Mycobacterium. sp) a. b. c. d. e. Gram staining capsule staining acid-fast staining endospore staining flagella staining __e_____46. The increased stability of __________ supercoils in archaea allows them to grow in more extreme environments. a. b. c. d. e. extra negative no flexible positive __a_____47. Fts proteins do which of the following? a. b. c. d. e. form a ring in the area where cell division will occur aid in DNA replication are involved in peptidoglycan synthesis are involved in making proteins are important in transcription __b_____48. Psychrophiles favor the cold since their membranes are more fluid at low temperature owing to the high proportion of __________ present. a. b. c. d. e. saturated fatty acids unsaturated fatty acids lipopolysaccharides transport proteins water 8 Name ___________________ CWID_______________ Questions from 48 thru 60 are from Exam 2. __c_____ 49. Special channels for helping water move across the membrane quickly are called: a. compatible solutes b. osmolarity c. aquaporins d. mechanosensitive channels e. chaperones _d______50. The milk that you drink is usually sterilized by___________: a. filtration b. gamma radiation c. UV radiation d. Pasteurization e. autoclaving ___b____51. The D-value of a bacterial culture heated to 100°C is the time it takes to kill __________% of the population. a. 99 b. 90 c. 50 d. 10 e. 1 __a_____52. Disposable plasticwares such as petri dishes can be sterilized using which of the following? a. ethylene oxide b. steam autoclave c. low temperature/longtime pasteurization d. phenol e. Iodine _c______53. The nucleoids of bacteria and most archaea, as well as the nuclear DNA of eukaryotes, are kept __________ supercoiled. a. positively b. neutrally c. negatively d. reverse e. extra __a_____54. Which of the following is NOT true of DNA replication in E. coli? a. It is conservative. b. It is bidirectional. c. Replication begins at the “origin of replication” d. DNA polymerase III synthesizes DNA e. Synthesis occurs in the 5'-to-3' direction. 9 Name ___________________ CWID_______________ __b_____55. The lagging strand is synthesized __________ , while the leading strand can be synthesized __________. a. continuously; discontinuously b. discontinuously; continuously c. 5'-to-3'; 3'-to-5' d. 3'-to-5'; 5'-to-3' e. quickly; slowly __a_____56. The primer in DNA replication is: a. an RNA starter sequence with a free 3' OH group b. an RNA starter sequence with a free 5' OH group c. a DNA starter sequence with a free 3' OH group d. a DNA starter sequence with a free 5' OH group e. a telomere with a free 5' phosphate __d_____57. Which of the following is NOT part of initiation of transcription? a. the RNA polymerase holoenzyme b. binding of RNA polymerase to the beginning of the gene c. melting of the helix d. synthesis of a primer e. initiation of RNA molecule __b_____58. The charging of tRNAs is carried out by a set of enzymes called __________ transferases. a. ribozymes b. aminoacyl-tRNA c. peptidyl d. proteases e. Polymerases _e______59. Why is recombination advantageous? a. It allows cells to use DNA donated by others of the same species to repair their damaged genes. b. It gives the ability to enhance the competitive fitness of the cell. c. It is an internal method of DNA repair. d. A and B e. all of the above __d_____60. The transfer of F factor in E. coli from one donor cell to a __________cell results in two __________ cells. a. donor; donor b. recipient; recipient c. donor; recipient d. recipient; donor e. recipient; Hfr 10