Gene linkage and Gene maps Objectives: identify the structures that actually assort independently explain how gene maps are produced the # of genes in a cell is FAR greater than the # of chromosomes each chromosome has hundreds – thousands of genes genes located on the same chromosome that tend to be inherited together = linked genes when geneticists follow linked genes in breeding experiments – the results deviate from the expected from Mendel’s law of independent assortment Thomas Hunt Morgan – experimental embryologist (1907) Columbia University – a skeptic of Mendelian Genetics – his work provided evidence that chromosomes are the location of Mendel’s heritable factors Morgan studied Gene linkage – with drosophila – fruit flies Morgan studied body color and wing size Wild type flies - gray bodies/normal size wings Mutants – black bodies/vestigial wings Mutant alleles recessive to wild type Gray body – b+b+ Normal wings – vg+ vg+ Crossed with Black body - bb Vestigial wings - vg vg Morgan observed a higher proportion of parental pheotypes than would be expected if the two genes assorted independently – he concluded these genes must be located on the SAME chromosome Offspring _ b+bvg+vg bbvgvg b+bvgvg bbvg+vg since Morgan’s results show that both of the nonparental pheonotypes were also produced, Morgan suggested that body color and wing size genes are only partially linked genetically Genetic Recombination When the offspring’s pheonotypes do not match the parent’s phenotype – the offspring are said to be Nonparental phenotypes – due to NEW COMBINATIONS of genes – RECOMBINANT TYPES or RECOMBINANTS Morgans results revisited Most of the offspring from the test cross for body color and wing size had Parental Phenotypes Suggests that the 2 genes are on the same chromosome Frequency of parental types > 50% suggests that the genes are linked 17% of offspring – nonparental types = recombinants Morgan deduced that some process must occassionaly break the connection between alleles on the same chromosome Crossing over – accounts for the recombination of linked genes – end portions of two nonsister chromatids trade places Recombination frequency is dependent on the distance between the linked genes Morgan’s student, Alfred Sturtevant, developed a method for constructing a gene map(an ordered list of genetic loci along a particular chromosome) Sturtevant(1911): based on his experiments –the farther apart two genes are, the higher the probability that a crossover will occur between them and therefore the higher the recombination frequency Linkage map = a genetic map based on recombination frequencies Linkage maps based on recombinant frequencies = approximate picture of a chromosome Frequency of crossing over is not uniform over the length of the chromosome – map units DO NOT correspond to the actual physical distances . Linkage maps DO portray the order of genes along a chromosome Mapping of the Human Genome employed cytogenetic maps – chromosome banding pattern and location of specific genes by fluorescence in situ hybridization(FISH) Along with linkage maps and physical mapping(utilizing yeast and bacterial artificial chromosomes(YAC,BAC) and finally DNA sequencing – determination of the nucleotide sequence