Genetic Inheritance: Beyond Mendel AP Biology Mendel’s work laid the foundation for an understanding of inheritance. However, it’s clear his work explaining traits with two alleles, one dominant, one recessive, represent just one possible type of inheritance. Some traits are determined by multiple genes; this is polygenic inheritance. In these cases, there are more genotypes, which results in a greater range of phenotypes. Some genes have more than two alleles in the population, or multiple alleles; again, more phenotypes result. In some traits alleles blend, or are expressed equally, in the heterozygote; this describes incomplete dominance and codominance, respectively. Other traits result from genes on the X chromosome, of which men have just one; these are sex-linked (X-linked) traits. Yet other traits are linked to one another, as the genes for each are close together on the same chromosome. These linked genes are less likely to be parted via crossing over and so are less likely to independently assort during meiosis. The relative distance between two genes can be calculated from offspring whose phenotypic ratio does not show the expected outcome from a standard Punnett. The greater this distance, the further apart on the chromosome the genes are, and the grater the likelihood the genes independently assort. A. Melanin Pigmentation Work in pairs. Each student tosses three coins – for example a penny (Pp), nickel (Nn) and dime (Dd) – representing three different genes that together determine the degree of skin pigmentation. Let heads represent the pigment allele, and tails the recessive. 1. Determine the number of pigment alleles required to make each of the phenotypes. Record in Table A. Which skin phenotype(s) are most likely? Why? Discuss with your lab partner(s) and write a conditional, justified hypothesis before continuing. 2. At the same time as your partner, toss your three coins. Count the number of pigment alleles in the genotype and record this trial with a tally in the appropriate column. Repeat for a minimum of 50 trials 3. Graph your results as a histogram. Analyze statistically: find the mean, median, mode, standard deviation, & standard error; and via chi2 test (‘expected’ Punnett uploaded) C. Linked Genes : Morgan’s Flies Linkage is determined by crossing a hybrid organism with one that is recessive for both traits. Recombination information regarding three genes on the same arm of the same chromosome is summarized in Table 2. Determine the relative location of each of genes from the centromere. 1. Determine the expected frequencies of each phenotype from a cross of a heterozygote and a homozygous recessive and a) the genes sort independently and b) the genes are adjacent on a chromosome (linked) Table 2 Black body & normal wing Purple eye & normal wing X x Gray body & vestigial wing Red eye & vestigial wing Black body & purple eye x Gray body & red eye BbVv Bbvv bbVv bbvv RrVv Rrvv rrVv rrvv BbRr Bbrr bbRr bbrr 965 185 944 1339 151 154 1195 1159 67 78 1017 206 2. 3. dominant alleles are in bold type. Do Morgan’s data match either expected frequencies? Recombination of the parent pairs occurred but infrequently, indicating linked genes that occasionally are broken up by crossing over. The closer the genes are to one another on the chromosome, the more the traits show up together. The further apart, the more likely genetic recombination occurs. Determine the percent recombination – phenotypes that do not match either parent – between each pair of traits. To find this value, use the following formula: recombined phenotypes ---------------------------- x 100 = percent recombination total offspring 4. Every 1% of recombination equals 1 Linkage Map Unit (LMU) between two traits. Use the three recombination percents to reflect the distances between the three genes on a chromosome. Sequence them on a line to reflect their positions relative to one another. C. Discussion: 1. Explain the coin analogy: why does each partner have a coin set? What do the heads and tails of each coin represent? How would you describe the genotype & phenotype of these parents? 2. What pattern does the graphed data A produce? Why does this pattern appear? Infer from your results about human hair color frequency. 3. What if parents are homozygous for pigmentation for two of the three genes – how would this affect the frequency distribution? Can med-pigmented parents have a dark child? Explain. 4. What do linkage maps tell us? What do they not tell us? Table A Number of melanin alleles pigmentation phenotype darkes t dark brown medium/ dark brown medium brown medium/ light brown light brown lightest Darkest skin dark brown medium/ dark brown medium brown medium/ light brown light brown lightest skin Coin tally (# heads) Coin Genotype(s) Total phenotype Number of melanin alleles Coin toss results (tally) Genotypes (coin combos) Total