South Tuen Mun Government Secondary School Biology Revision Note 20 A gene is a short segment of DNA in chromosomes. The gene determines amino acid sequence of protein thus controlling our character. Because chromosomes occur in pair, a gene has a pair of different alleles on homologous chromosomes pair. Mendel’s first law / Law of segregation – a character is controlled by a pair of alleles, the alleles separate during gamete formation and recombines randomly in fertilization. Phenotype – the observable character Genotype – the genetic make up Homozygous – the two alleles of a gene is the same e.g. AA, aa (homozygous recessive) Heterozygous – the two alleles of a gene is different e.g. Aa Dominant – the allele which is expressed in heterozygous condition Recessive – the allele which is not expressed in heterozygous condition, it is only expressed in homozygous recessive condition Question What to look for? Explanation (i) Which allele is dominant? Look for 2 parents which when The two tall parents produce short crossed, produced a character which offspring showing that either parent is not the same as the parent e.g. tall is heterozygous, in heterozygous man x tall woman give birth to short parent, the dominant allele is offspring expressed, thus tall allele is dominant over short allele. (ii) What are the genotypes of an individual? Homozygous recessive An individual showing recessive Recessive allele can only be Homozygous dominant / Heterozygous phenotype Use test cross – cross an individual with a homozygous recessive individual expressed in homozygous condition. If two phenotypes are produced, the individual is heterozygous; if one phenotype is produced, the individual is homozygous dominant. (iii) Probability of an individual with a character Work out the genetic cross and calculate the probability Explain with genetic diagram The diagram below shows a pedigree for the inheritance of a human genetic disease caused by a single gene. (a) Which allele, the normal allele or the diseased allele, is dominant? Explain your answer without using a genetic diagram. (4 marks) Normal allele (1). Individual 3 marries individual 4 and give birth to a diseased son (1), the diseased son must receive the diseased allele from either parent, thus one of the parents is heterozygous (1). In heterozygous condition, the dominant allele is expressed, as the parents are both normal, the normal allele is expressed and thus is dominant (1). (b) Deduce, with reasons, (i) the genotype of individual 2. (4 marks) Individual 2 is heterozygous (1). She gives birth to a daughter who has the disease, as the diseased allele is recessive, her daughter must be homozygous recessive (1). In homozygous recessive condition, the daughter must receive one recessive allele from her mother, individual 2, thus individual 2 has one recessive allele (1). Individual 2 is normal, she must also possess the normal allele (1). Thus she has one recessive diseased allele and one normal allele, she is heterozygous. (ii) the genotype of individual 8. (2 marks) Individual 8 is homozygous recessive (1) because she is diseased which is a recessive character. (1) (c) If individual 3 and 4 are going to have another child, what is the probability of this child having the disease? Illustrate your answer with a genetic diagram. (5 marks) Probability = ¼ (1). Let B be the normal allele and b be the diseased allele (1) Parents : Gamete B Individual 3 Bb b Genotype of offspring Phenotype of offspring BB normal x B Bb normal Individual 4 Bb b Bb normal bb diseased (1) (1) (1) (1) Sex-linked gene inheritance – e.g. haemophilia and red-green colourblinded, the allele is found on X chromosome, Y chromosome has no corresponding allele because X chromosome is longer than Y chromosome. Let H be the allele for normal (no haemophilia), h be the allele for haemophilia. H is dominant over h. A carrier female has the allele of haemophilia, but is masked by the dominant normal allele, thus she does not have haemophilia; however, there is 50% that she passes the allele to male and makes 50% of her son haemophilia. There is no male carrier. Male can only be normal or haemophilia. Multiple allele – there are 3 or more alleles at a gene locus e.g. blood group – there are three alleles at the same gene locus, an individual can have two of the three alleles: The three alleles are : The possible blood group and genotypes are: An example of cross diagram between AB and O Dihybrid cross – a cross that involves 2 gene loci Let T be the tall allele, t be the short allele; C be the coloured allele, c be the recessive allele For example, a cross between tall, coloured parent plants (TtCc X TtCc), and the use of Punnett Square Mendel’s second law / law of independent assortment : the separation and combination of the two alleles for one gene is NOT affected by the separation of the two alleles for the other gene. Test cross a genetic cross between an individual with the dominant phenotype with a recessive phenotyped parent (genotype : homozygous recessive) the purpose is to find out the genotype of the individual with the dominant character For example : Let T be the allele for tall allele, t be the short allele. Tall allele is dominant over short allele. A tall plant can have genotype TT or Tt. As seen from the cross diagrams, if the tall plant is TT, all the offspring will be tall, for Tt, the phenotypic ratio Tall : short = 1 : 1 Variation (i) Continuous variation – character that cannot be divided into sharp distinct groups, there is always intermediate phenotypes between two distinct groups Examples : Weight, height, length of fingers, I.Q. Continuous variation are characters which are strongly affected by the environment e.g. food supply, they are normally controlled by a large number of genes. (ii) Discontinuous variation – character that can be separated into sharp distinct groups, no intermediate between groups Examples : tongue rolling, ear-lobed Discontinuous variation are characters which are not affected by the environment, they are normally controlled by one or a few genes. Their pattern of inheritance can be followed by Mendel's law. (iii) The causes of variation Independent assortment of chromosomes in meiosis produces a large number of different gametes. Random fertilization of different gametes by chance makes the offspring of the same parents different. Mutation – an inherited change in the genetic material/DNA (iv) Environment Chemical structure of DNA (deoxyribonucleic acid) DNA is a polymer made up of a basic unit, nucleotide. A nucleotide has 3 parts : phosphate, deoxyribose (5-C sugar) and nitrogen base. There are 4 types of nitrogen bases : adenine (A), thymine (T), guanine (G) and cytosine (C). DNA is made up of 2 strands of polynucleotide. One strand is running opposite to the other. The two strands run spirally, thus it is called double helix. “A” always bind with “T” and “G” always bind with “C” by hydrogen bondings, thus it is called complementary base pair. DNA replication Protein synthesis (i) Transcription of DNA inside the nucleus One of the two strands in DNA is used as a template for making mRNA. (Note : RNA has no thymine but it has uracil [U], “A” binds with “U” and “C” binds with “G”. RNA polymerase is the enzyme that catalyses the formation of mRNA. The base sequence of DNA determines the base sequence of mRNA. (ii) Translation of mRNA to make protein tRNA has anticodon that is complementary to the codon of mRNA. The anticodon determines a specific amino acid carried by the tRNA. Thus the base sequence of mRNA determines the amino acid sequence of the protein. Codon 3 consecutive bases on the mRNA, it is determined by the triplet genetic code of DNA the codons on one mRNA is non-overlapping the codons are degenerate [there are 20 amino acids determined by 43 = 64 codons, thus one amino acid is determined by 2 or more codons], in the codons that determine the same amino acid, the first two bases are the same while the third base can be different. the codons are universal [all living organisms use the same codon for the same amino acid] some codons do not determine any amino acids, they are stop signals e.g. UAG and UAA, translation stops at these codons the codon AUG acts as a start signal because translation starts at this codon, it determines the amino acid “methionine”. Triplet genetic code 3 consecutive bases on the DNA Recombinant DNA technology A vector is used to transfer a gene / a segment of DNA from the donor into another organism e.g. virus DNA (viral DNA), bacterial plasmid. In this example: plasmid acts as the vector. A plasmid is a smaller circular / ring of extrachromosomal DNA in bacteria. Restriction enzyme [endonuclease / restriction eodonuclease] recognizes specific base sequence and cut the DNA at specific site some restriction enzymes (not all) produce sticky ends when cutting the DNA [Sticky end is a single strand base sequence of a DNA that readily binds to a single strand base sequence of another DNA that are complementary. restriction enzymes are specific Ligase is an enzyme that joins DNA together. The recombinant plasmid contains a foreign DNA. It is then put into a host cell e.g. in this example, E. coli is the host cell. E. coli is now a Genetically Modified Organism (GMO). When the GMO is an organism that produces a food for human, the food is called GM food. Advantage of human insulin as a drug: Less side effects e.g. chance of rejection, allergy is lower Less impurities A large quantity can be produced in a shorter time cheaper