Chapter 5 – Genetic Contributions to the Development of Obesity Questions 1. List three reasons to study the genetic basis of population variations in adiposity and obesity. 2. List three reasons why the identification of genes may not be needed as prognostic indicators for prevention of obesity. 3. Define the terms, allele, chromosome, homozygous, heterozygous, genomes, genes, genotype and recessive, needed to understand deeper analyses of the genetics of obesity. 4. Explain the current estimate of heritability of the genetics of obesity, and its importance in studying the genetics of obesity. 5. Identify three novel approaches used in human models to study the genetics of obesity. 6. Identify the main conclusions of animal and human research and the genetics of obesity. 7. Explain the importance of considering fetal programming and epigenetics in the development of obesity. Understanding Obesity: Biological, Psychological and Cultural Influences. Edited by Sharon Akabas, Sally Ann Lederman and Barbara J. Moore. © 2012 John Wiley & Sons, Inc. Published 2012 by John Wiley & Sons, Inc. Chapter 5 – Genetic Contributions to the Development of Obesity Answers 1. Some investigators want to understand the evolutionary basis of our current population distribution of adiposity (8-12) and the “genetic architecture” of the trait at present. A second reason to study the genetics of obesity is to identify genes that can be used as prognostic factors to indicate who is likely to become obese so that they can be given preventive therapy. There are, however, at least three reasons to question the validity of this goal. A third reason people study the genetics of obesity is to identify genes that moderate the safety and/or efficacy of treatments. 2. First, one could probably do such prognostication just as well, if not better, by using parental adiposity levels as the predictive factors. This approach would not require the expensive and difficult process of identifying specific genes. Second, given current population levels of obesity, we can simply predict that everyone will be obese and we would be correct at least one-third of the time. Third, even if we had such a prognostic factor, at present we do not have a prevention strategy that is known to work. 3. Genes are the units of heredity. Genes are ordered sequences of DNA (deoxyribonucleic acid) that store information. A chromosome is a single, long molecule of DNA that contains many genes. The information stored in DNA may be expressed through either RNA (ribonucleic acid) or proteins. Variations in DNA sequence are caused by mutation. An allele is one specific sequence of the DNA in a gene. Alleles can differ greatly with respect to RNA and protein expression. For most genes in humans, there are two alleles, one on the chromosome inherited from the mother and the other on the chromosome inherited from the father. If the alleles of a given gene are the same, then the person is homozygous for that gene. If the alleles are different, then the person is heterozygous for that gene. The particular pair of alleles that a person carries for a given gene is called his or her genotype. Recessive alleles are those that are expressed only when an individual is homozygous for the gene. If there is only one copy of a recessive allele, it is overpowered by the allele on the other chromosome, the dominant allele. An observable characteristic such as body weight is called a phenotype. A phenotype may reflect both genetic and environmental influences. The genome is the complete set of genetic information for an individual. 4. Current heritability estimates are in the range of 60% to 70% seem to be the most accurate for BMI. Some people who wish to make beneficial changes to human health by altering the environment seem to see these figures as Understanding Obesity: Biological, Psychological and Cultural Influences. Edited by Sharon Akabas, Sally Ann Lederman and Barbara J. Moore. © 2012 John Wiley & Sons, Inc. Published 2012 by John Wiley & Sons, Inc. threatening or disheartening. However, heritability estimates of 60% to 70% imply that environmental factors explain the remaining 30% to 40% of the variance in BMI, which is a substantial proportion of the total variance. It implies, for example, that moving people merely one standard deviation down in environmental risk (i.e., making a moderate change to the environment) could decrease average BMI by two units. This would correspond to roughly a 10% reduction in relative weight, roughly the amount that can be achieved with the best available pharmaceuticals today, illustrating the power of the environment even in the face of strong heritability. 5. Transcriptomics, also called genome-wide expression profiling, examines the expression levels of mRNA in order to understand the functional role of genes, the regulation of gene expression in various cell types and states, and how gene expression is affected by various treatments and diseases. Epigenetics refers to the study of variations in an individual’s phenotype, due to differences in genetic expression, but which occur without changes in DNA sequence. These sources of variation include the addition of certain chemical groups, such as methyl groups, to DNA. Copy number variation (CNV) refers to differences in the number of copies of large stretches of DNA among individuals, differences that are caused by gains, losses, and duplications of large chunks of DNA. 6. It has been over two decades since Stunkard and colleagues provided the first evidence for a genetic component to obesity that the research community found overwhelmingly compelling. Since then, we have: 1) further refined the heritability of adiposity and shown that it is quite substantial, complex, and nonadditive; 2) identified literally scores of specific genes in animal models that can unequivocally induce or reduce adiposity as well as alter other obesity-related phenotypes; and 3) found several regions of the human genome that appear to harbor genes increasing the risk of obesity. Most recently, we have perhaps the first truly convincing report of an association of a specific genotype with common obesity in humans and have since identified 22 more such associations. 7. One recently developed idea is that environmentally acquired alterations in adiposity may be transmitted to generations beyond the parents’ immediate offspring, due to what are termed epigenetic factors. This proposes that environmental signals may be passed to grandchildren and subsequent generations through effects on the genome, even if those generations did not experience the original signal. Understanding Obesity: Biological, Psychological and Cultural Influences. Edited by Sharon Akabas, Sally Ann Lederman and Barbara J. Moore. © 2012 John Wiley & Sons, Inc. Published 2012 by John Wiley & Sons, Inc.