Biopolymers Peptide Science Supporting Information Design, synthesis, in vitro stability and cytostatic effect of multifunctional anticancer drug-bioconjugates containing GnRH-III as a targeting moiety Ulrike Leurs1, Gábor Mező2, Erika Orbán2, Peter Öhlschläger3, Andreas Marquardt4 and Marilena Manea 1,5* 1 2 3 Laboratory of Analytical Chemistry and Biopolymer Structure Analysis, Department of Chemistry, University of Konstanz, 78457 Konstanz, Germany Research Group of Peptide Chemistry, Hungarian Academy of Sciences, Eötvös Loránd University, 1117 Budapest, Hungary Laboratory of Immunology, Department of Biology, University of Konstanz, 78457 Konstanz, Germany 4 Proteomics Facility, University of Konstanz, 78457 Konstanz, Germany 5 Zukunftskolleg, University of Konstanz, 78457 Konstanz, Germany *Corresponding author: Dr. Marilena Manea, University of Konstanz, Zukunftskolleg and Department of Chemistry, Laboratory of Analytical Chemistry and Biopolymer Structure Analysis, Universitätsstrasse 10, 78457 Konstanz, Germany; Phone: (+49)-7531-88-2285; Fax: (+49)-7531-88-3097 E-mail: marilena.manea@uni-konstanz.de Table of Contents RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[4,8Lys(Dau=Aoa)] .................................. S3 RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[8Lys(Dau=Aoa- Lys(Dau=Aoa))] ......... S3 RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[8Lys(Dau=Aoa)] .................................... S4 Stability of GnRH-III[4,8Lys(Dau=Aoa)] in human serum. ......................................................................... S5 Stability of GnRH-III[8Lys(Dau=Aoa- Lys(Dau=Aoa))] in human serum. ................................................ S6 Degradation of daunorubicin-GnRH-III derivative bioconjugates in the presence of rat liver lysosomal homogenate. ................................................................................................................................................ S7 S2 30.3 3+ 822.7 * 3+ Intens. x 107 779.7 3 2+ 1233.5 2 1 MW (calc.) 2465.57 MW (exp.) 2465.07 400 600 800 1000 1200 1400 1600 m/z time [min] Figure 1 RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[4,8Lys(Dau=Aoa)]. The asterisk indicates the loss of daunosamine. 29.00 Intens. x 107 3+ 852.0 2 2+ 1277.2 1 4+ 639.8 500 MW (calc.) 2553.66 MW (exp.) 2553.53 1000 1500 2000 m/z time [min] Figure 2 RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[8Lys(Dau=Aoa- Lys(Dau=Aoa))]. S3 100 90 26.5 6 80 mAU [280 nm] 3+ 614.7 Intens. x106 2+ 921.5 70 60 4 50 40 30 2 * 20 3+ 565.7 10 * 2+ 856.6 MW(calc): 1840.75 MW(exp): 1841.05 0 0 10 15 20 25 30 35 40 45 50 55 200 400 600 800 1000 1200 1400 1600 1800 m/z Time(min) Figure 3 RP-HPLC profile and ESI-ion trap mass spectrum of GnRH-III[8Lys(Dau=Aoa)]. The asterisk indicates the loss of daunosamine. S4 A B □ 764.8 Intens. x104 □ Intens. x104 764.7 2.0 * 4 3+ 779.9 3 1.5 3+ 823.0 □ 1.0 2 □ 887.0 1 500 600 700 800 900 ** 2+ * 1104.5 2+ 1169.0 1000 1100 886.9 561.6 1200 786.7 0.5 473.7 1300 m/z 625.6 822.6 0.0 300 400 500 600 700 800 900 1000 1100 1200 m/z Figure 4 Stability of GnRH-III[4,8Lys(Dau=Aoa)] in human serum. (A) ESI-ion trap mass spectrum was recorded after 24 hours of incubation of the bioconjugate in human serum at 37°C. Mass spectrum was averaged over the chromatographic window where the compounds eluted. The loss of daunosamine is indicated by an asterisk (-129) or double asterisk (-147). The squares indicate ions originating from human serum. GnRH-III[4,8Lys(Dau=Aoa)] MWcalc=2465.57 MWexp=2465.40 (B) ESI-ion trap mass spectrum of human serum recorded under the conditions described above. S5 A Intens. x104 B □ Intens. 600 4+ 639.4 735.5 500 2.0 3+ 851.8 1.5 400 689.4 300 □ 1.0 588.7 200 □ 735.6 0.5 1032.9 843.0 □ 100 1162.0 1238.6 1032.9 0 500 600 700 800 900 1000 1100 m/z 500 600 700 800 900 1000 1100 1200 1300 1400 m/z Figure 5 Stability of GnRH-III[8Lys(Dau=Aoa- Lys(Dau=Aoa))] in human serum. (A) ESI-ion trap mass spectrum was recorded after 24 hours of incubation of the bioconjugate in human serum at 37°C. Mass spectrum was averaged over the chromatographic window where the compounds eluted. The squares indicate ions originating from human serum. GnRH-III[8Lys(Dau=Aoa-Lys(Dau=Aoa))] MWcalc=2553.66 MWexp=2553.00 (B) ESI-ion trap mass spectrum of human serum recorded under the conditions described above. S6 A B * ** 1+ 584.7 Intens. x 104 Intens. x 104 3+ 771.8 0.6 * 1+ 729.2 0.4 1.0 2+ 1016.5 * 1.5 1+ 600.4 * 2+ 2+ 878.5 952.0 2+ 732.8 3+ 851.9 * ** 3+ 803.0 2+ 659.1 * 0.2 * * 1+ 1034.5 2+ 644.1 500 Figure 5 700 900 2+ 704.9 0.5 ** ** 1+ ** 1+ 1+ 1334.7 1181.5 1278.6 1+ 1163.6 1100 1300 m/z 400 600 800 1000 1200 1400 1600 m/z Degradation of daunorubicin-GnRH-III derivative bioconjugates in the presence of rat liver lysosomal homogenate. ESI-ion trap mass spectra were recorded after 24 hours of incubation of the bioconjugates in the presence of rat liver lysosomal homogenate (1:1 ratio, w/w) at 37°C. Mass spectra were averaged over the chromatographic window where the compounds eluted. The asterisk indicates the loss of daunosamine; the double asterisk indicates the loss of two daunosamine moieties. (A) GnRH-III[4,8Lys(Dau=Aoa)] (B) GnRH-III[8Lys(Dau=Aoa-Lys(Dau=Aoa))] S7