BI 112 VITAL VOCAB #3 Be sure to review the SCIENTIFIC METHOD CHAPTER 10 – The Structure of the Genetic Material DNA HISTORY – know as much about each experiment as is listed below 1. Hershey-Chase Experiment: DNA, not protein, is the genetic factor 2. Chargaff’s Rules: A = T, C = G 3. Franklin and Wilkins: X-ray crystallography of DNA 4. Watson and Crick: model of DNA double helix incorporating this data DNA STRUCTURE 1. Nucleic Acid 2. Nucleotides 3. Double Helix 4. Deoxyribose sugar 5. Phosphate 6. Nitrogenous bases: a. Adenine b. Thymine c. Cytosine d. Guanine 7. Sugar-phosphate backbone 8. Know where the covalent and hydrogen bonds are! 9. 5’ end (phosphate 10. 3’ end (OH group of sugar) 11. DNA packaging a. Histone proteins b. Chromosome 12. DNA Replication a. Semi-conservative b. Nucleic acids are ALWAYS synthesized in 5’ to 3’ direction c. When does the cell replicate DNA? d. Helicase e. DNA polymerase f. Leading strand g. Lagging strand h. Ligase i. Prokaryotic DNA replication i. Circular DNA ii. One origin of replication j. Eukaryotic DNA replication i. Linear DNA packaged in chromosomes ii. Many origins of replication PROTEIN SYNTHESIS 1. DNA RNA Protein 2. RNA a. Nucleic Acid b. Nucleotides c. Single stranded d. Ribose sugar e. Phosphate f. Nitrogenous bases: i. Adenine ii. Uracil iii. Cytosine iv. Guanine g. Sugar-phosphate backbone h. Know where the covalent and hydrogen bonds are! 3. Transcription a. Gene b. mRNA c. Initiation d. RNA polymerase e. Promoter f. Elongation g. Coding region h. What type of chemical reaction attaches 2 nucleotides together? i. Termination j. Terminator (termination region) 4. mRNA processing a. intron (what organisms have them?) b. exon c. 5’ cap d. 3’ poly-A tail 5. Translation a. Ribosome b. Codon c. Be able to use the table of codons that was in the last quiz! d. mRNA e. tRNA f. rRNA (ribosome) g. initiation h. elongation i. termination j. codon k. anti-codon l. Start codon (AUG; methionine) m. Polypeptide n. Stop codons MUTATIONS 1. Single base substitution a. Missense b. Nonsense c. Silent 2. Frameshift mutation a. Reading frame b. Insertion c. Deletion 3. Be able to take a sequence of DNA, transcribe it to mRNA, then translate it to find the amino acid sequence. SKIP CHAPTER 11 – Gene Regulation GENETIC POTENTIAL 1. Differentiated cell 2. Specialized cell 3. Stem cells 4. Genome 5. Non-coding DNA GENE CONTROL 1. Packaging a. Histone / Chromosome b. DNA and histone methylation (recognize they are involved in gene control) c. X chromosome inactivation 2. Transcription a. Lac Operon (bacteria) i. Operon ii. What happens when lactose is present? iii. What happens when lactose is not present? b. Trp Operon (bacteria) i. What happens when tryptophan is present? ii. What happens when tryptophan is not present? c. Eukaryotic gene expression i. Transcription factors 3. mRNA maturation a. mRNA splicing (introns) b. alternative mRNA splicing c. addition of 5’ cap and 3’ poly-A tail 4. mRNA breakdown 5. Translation 6. Protein Regulation a. Phosphorylation b. Acetylation c. cleavage 7. Protein Degradation CHAPTER 8 – The Cellular Basis of Reproduction and Inheritance CELL DIVISION INTRODUCTION 1. Asexual Reproduction a. Binary fission b. Budding c. Vegetative propagation d. Mitosis 2. Sexual Reproduction a. Meiosis 3. Chromosome 4. Centromere 5. Sister chromatids 6. Homologous pair 7. Locus 8. Allele 9. Diploid (2n) 10. Haploid (1n) 11. Karyotype MITOSIS 12. 13. 14. 15. 16. 17. a. b. c. 18. a. b. c. d. e. 19. 20. When? Why? Centrosome Spindle fiber Somatic cell Interphase G1 - growth S – DNA replication G2 – growth Phases of Mitosis Prophase Metaphase Anaphase Telophase Cytokinesis (not a phase) i. What happens in animal cells? ii. What is the difference(s) in plant cells? f. Be able to summarize the events in each phase and recognize the phase in a picture of a cell Anchorage-dependent Density-dependent 21. Cancer a. Benign b. Malignant c. Metastatic MEIOSIS 1. When? 2. Why? 3. Gamete 4. zygote 5. Interphase 6. Phases of Meiosis I a. Prophase I i. Crossing-over 1. Parental chromosome 2. Recombinant chromosome b. Metaphase I i. Independent Assortment of homologous pairs c. Anaphase I d. Telophase I / Cytokinesis 7. Phases of Meiosis II a. Prophase II i. NO Crossing-over b. Metaphase II i. Independent Assortment of sister chromatids c. Anaphase II d. Telophase II / Cytokinesis 8. Know the two ways meiosis can introduce genetic variation! 9. Non-disjunction (meiotic mistakes) a. Trisomy 21 - Down Syndrome b. Monosomy 10. Chromosomal Defects a. Deletion b. Duplication c. Inversion d. Reciprocal translocation BE ABLE TO COMPARE THE FOLLOWING FEATURES OF MITOSIS AND MEIOSIS 1. Starts with what type of cell? (haploid / diploid) 2. Produces what type of cell? 3. Replicates DNA how many times? 4. # of cell divisions 5. Pairing of homologous chromosomes? 6. When do centromeres separate? 7. Daughter DNA? 8. Daughter cells haploid or diploid? 9. # of daughter cells? 10. Crossing over? CHAPTER 9 – Patterns of Inheritance VARIATION IN GAMETES 1. If there are N chromosomes, how many possible gametes can be created? 2. Sources of genetic variation (again!) 3. Haploid gamete 4. Fertilization 5. Diploid zygote 6. Homologous chromosome a. Allele b. locus MENDELIAN GENETICS 7. P generation, F1 generation, F2 generation 8. Law of segregation a. Monohybrid cross b. allele c. Dominant d. Recessive e. Homozygous f. Heterozygous g. Phenotype h. Genotype 9. Law of independent assortment a. Dihybrid cross 10. Punnett Square – be able to solve the following kinds of problems! a. Monohybrid cross i. Dominant / recessive ii. Sex-linked iii. Incomplete dominance iv. Codominance 1. Blood type b. Dihybrid gross i. Dominant / recessive 11. Test Cross 12. Gene linkage 13. Pleiotropy 14. Polygenic trait 15. Epistasis 16. Environmental effect 17. Pedigree (know symbols for a male / female; know how to read) Changing Populations and Evolution Natural Selection Genetic Drift Mutation Gene flow Adaptation Ecological trade-offs (as in adaptations) Species Hybrid offspring Diverging populations Interbreeding Speciation Biological Evolution microevolution and macroevolution Antibiotics and Drug resistance