MICROBIOLOGY FOR PUBLIC HEALTH (PCH4990) Sections 2110 Online Classroom (eLearning) Instructor: Kristen (Hellein) Coffey E-mail: khellein@uwf.edu Office: Bldg 58. Room 005 Office Hours: M/W 12:30 – 1:30pm; T 2:00 – 3:00pm; Or by appointment. Phone: 850-857-6021 Required Text: None. Materials will be posted on eLearning with each week’s module. Prerequisites or Co-Requisites: None Course Description: This course integrates an introduction to microbiology with an emphasis on the important skills of: 1) critical thinking; 2) scientific writing; and 3) preparation for Epidemiology of Infectious Diseases. Although the specific focus is on microorganisms, the course incorporates a thorough review of important subjects. Microbiology is highly relevant to both scientists and the general public. This course seeks to provide students with an understanding of important scientific concepts, an ability to think critically, and an understanding of the importance of microbiology in public health. The Student Learning Outcomes of this course are: 1. Tell the major contributions of selected individuals in the field of microbiology. 2. State the germ theory of disease and tell the importance of Koch’s postulates. 3. Describe the differences between eukaryotic and prokaryotic cells. 4. Describe factors involved in the growth and inhibition of growth of microorganisms. 5. To provide an understanding of the role of microbes in disease transmission and prevention 6. Demonstrate a basic knowledge of the immune system and how vaccines function. 7. Tell the distinguishing characteristics of bacteria, fungi, viruses, and parasites involved in disease. 8. Tell diseases caused by bacteria, fungi, viruses, and parasites. 9. Demonstrate a basic knowledge of the principles underlying microbial causation of disease. Topics Covered: See schedule. Method of Instruction: This class is a lecture delivered entirely online with internet based exercises. Classes will open by 12:00 am Monday of each week. Each week’s module will contain Student Learning Outcomes, Narrated Powerpoint, Supplemental Reading for Discussion (if applicable), a Homework Assignment (if applicable), and a Checklist. 1 Grading/Evaluation: Quizzes: 10 pts. Each. Quizzes will be on that week’s presented material. They will open on Thursdays at 12:00 am and close Sundays at 11:59 pm, as indicated in the schedule. No make-up quizzes will be allowed. Quizzes are graded immediately and quiz answers will be made available once the quiz closes. Homework/Case Studies: 10 pts. Each. When homework is assigned, it will open with the week’s module. It will be due in the appropriate Dropbox by 11:59 pm Sunday of that week, as indicated in the schedule. I will grade and return homework to you within one week. Late assignments will not be accepted. Discussions: 10 pts. Each. As indicated in the schedule, a relevant news article will occasionally be posted. You will be required to participate in a guided discussion forum on the topic of the article. The quality of your participation is being graded. Discussions participation must be completed by Sunday of that week at 11:59 pm, as indicated in the schedule. Please read the Netiquette Rules before participating. Exams: 100 pts. Each. Exams will consist of several types of questions to include True/False, Short Answer, Matching, and Essay. Exams will be administered in the Respondus Lockdown Browser and will have a time limit of one hour. Please do not begin the exam in the time that may overlap with the eLearning maintenance window, which runs from 3:00 – 6:00 am (CST) each day. If you are interrupted by eLearning maintenance, your score will be recorded as and remain a zero; no exceptions. If you experience any technical problems or errors during the exams (excluding an overlap with eLearning maintenance), you are required to notify the HelpDesk immediately at helpdesk@uwf.edu or 850-474-2075. Failure to contact the HelpDesk will result in a grade of zero on the exam. If you are unable to get immediate help, attempt to restart the browser or open the exam in a different browser. If you still cannot access the exam, e-mail me with information that shows you contacted ITS and we will arrange a make-up exam. 2 Grading policies: Grades are determined as follows: % of grade Quizzes 10 Homework Assignments 15 Discussions 15 Exam 1 15 Exam 2 15 Exam 3 15 Exam 4 15 Total Grading Scale: 93-100 = A 100% 73-76 = C 90-92 = A- 70-72 = C- 87-89 = B+ 67-69 = D+ 83-86 = B 63-66 = D 80-82 = B77-79 = C+ 60-64 = DBelow 63 = F Expectations for Academic Conduct/Plagiarism Policy: As members of the University of West Florida, we commit ourselves to honesty. As we strive for excellence in performance, integrity—personal and institutional—is our most precious asset. Honesty in our academic work is vital, and we will not knowingly act in ways which erode that integrity. Accordingly, we pledge not to cheat, nor to tolerate cheating, nor to plagiarize the work of others. We pledge to share community resources in ways that are responsible and that comply with established policies of fairness. Cooperation and competition are means to high achievement and are encouraged. Indeed, cooperation is expected unless our directive is to individual performance. We will compete constructively and professionally for the purpose of stimulating high performance standards. Finally, we accept adherence to this set of expectations for academic conduct as a condition of membership in the UWF academic community. Please see the training tutorial on plagiarism at http://library.uwf.edu/Tutorials/module_plagiarism/default.htm. 3 Code of Conduct: The Student Code of Conduct sets forth the rules, regulations and expected behavior of students enrolled at the University of West Florida. Violations of any rules, regulations, or behavioral expectations may result in a charge of violating the Student Code of Conduct. It is the student’s responsibility to read the Student Code of Conduct and conduct themselves accordingly. Students may access the current Student Code of Conduct at http://www.uwf.edu/judicialaffairs. Students with Disabilities: The Student Disability Resource Center (SDRC) at the University of West Florida supports an inclusive learning environment for all students. If there are aspects of the instruction or design of this course that hinder your full participation, such as time-limited exams, inaccessible web content, or the use of noncaptioned videos and podcasts, please notify the instructor or the SDRC as soon as possible. You may contact the SDRC office by e-mail at sdrc@uwf.edu or by phone at (850) 474-2387. Appropriate academic accommodations will be determined based on the documented needs of the individual. Computer Savvy: Not all of us are computer savvy. Please see the material in the Orientation section of your eLearning site for tutorials and information of computer help. Minimum Technical Skills and Special Technology Utilized by Students This course is totally online. All instructional content and interaction takes place over the WWW. In addition to baseline word processing skills and sending/receiving email with attachments, students will be expected to search the internet and upload/download files. In addition, students may need one or more of the following plug-ins: Adobe Acrobat Reader: http://www.adobe.com/products/acrobat/readstep2.html PowerPoint Viewer: http://www.microsoft.com/downloads/details.aspx?FamilyID=048DC840-14E1467D-8DCA-19D2A8FD7485&displaylang=en Windows Media Player: http://www.microsoft.com/windows/windowsmedia/download/ QuickTime Player: http://www.apple.com/quicktime/download/ Real Player: http://www.real.com/realplayer/search Adobe Flash Player: http://get.adobe.com/flashplayer/ For students’ using Screen Readers: Download Elluminate’s Java Bridge:https:// www.elluminate.com/Support/Other_Resources/Java_Accessibility_Bridge/?id36 8 eLearning’s Accessibilty Resource Guides for users: http://www.desire2learn.com/access/resources/ TurnItIn UWF maintains a university license agreement for an online text matching service called TurnItIn. At my discretion, I will use the TurnItIn service to determine the originality of student papers. If I submit your paper to TurnItIn, it will be stored in a TurnItIn database for as long as the service remains in existence. If you object to this storage of your paper: 4 1. You must let me know no later than two weeks after the start of this class. 2. I will utilize other services and techniques to evaluate your work for evidence of appropriate authorship practices. Weather Emergency Information In the case of severe weather or other emergency, the campus might be closed and classes cancelled. Official closures and delays are announced on the UWF website and broadcast on WUWF-FM. WUWF-FM (88.1MHz) is the official information source for the university. Any pertinent information regarding closings, cancellations, and the re-opening of campus will be broadcast. In the event that hurricane preparation procedures are initiated, the UWF Home Web Page and Argus will both provide current information regarding hurricane preparation procedures, the status of classes and the closing of the university. Emergency plans for the University of West Florida related to weather or other emergencies are available on the following UWF web pages: o Information about hurricane preparedness plans is available on the UWF web site: http://uwfemergency.org/hurricaneprep.cfm o Information about other emergency procedures is available on the UWF web site: http://uwfemergency.org/ Course Withdrawal: The deadline for withdrawal is 2 Nov 2012. The last day for Drop/Add is 31 Aug 2012. The UWF website for the Academic Calendar is: http://uwf.edu/registrar/calendar.cfm Course Communication: All emails will be answered within 24 hours, excluding weekends. All graded material will be returned with feedback within one week of submission. Flexibility: It is the intention of the instructor to accomplish the objectives specified in the course syllabus. However, circumstances may arise which prohibit the fulfilling of this endeavor. Therefore, this syllabus is subject to change. When possible, you will be notified of any change in advance of its occurrence. 5 Dates 27 Aug – 2 Sept 4 – 9 Sept 10 – 16 Sept 17 – 23 Sept Module And Topics Covered Module 1: Welcome and Introduction Powerpoint Module 1 Core Concepts Microbiology Through History Powerpoint Koch’s Postulates Video Checklist, Module 1 Module 2: Module 2 Core Concepts Cell Structure and Function Powerpoint Homework Assignment 1 Checklist, Module 2 Module 3: Module 3 Core Concepts Microbial Growth, Nutrition, and Genetics Powerpoint Supplemental Reading: Glowing Bacteria Make a Pretty Postcard Checklist, Module 3 EXAM 1 24 – 30 Sept 1 – 7 Oct Module 5: Module 5 Core Concepts Infection and Disease Powerpoint Supplemental Reading: Newly Emerging Disease Checklist, Module 5 15 – 21 Oct Quiz 1: Microbiology Through History Quiz 2: Cell Structure and Function Homework 1 Quiz 3: Microbial Growth, Nutrition, and Genetics Discussion 1 EXAM 1 Module 4: Module 4 Core Concepts Physical and Chemical Control of Microbes Powerpoint Homework Assignment 2 Checklist, Module 4 8 – 14 Oct Graded Material Module 6: Module 6 Core Concepts Innate and Acquired Immunity, Vaccines Powerpoint Homework Assignment 3 Checklist, Module 6 EXAM 2 Quiz 4: Physical and Chemical Control of Microbes Homework 2 Quiz 5: Infection and Disease Discussion 2 Quiz 6: Innate and Acquired Immunity, Vaccines Homework 3 EXAM 2 6 22 – 28 Oct 29 Oct – 4 Nov 5 – 11 Nov 13 – 18 Nov 19 – 21 Nov, 24 – 25 Nov 26 Nov – 2 Dec 3 – 7 Dec 8 – 13 Dec Module 7: Module 7 Core Concepts Introduction to Epidemiology Powerpoint Supplemental Reading: Listeria in Cantaloupe Checklist, Module 6 Module 8: Module 8 Core Concepts Air-, Food-, and Water-borne Bacterial Infections Powerpoint Supplemental Reading: Case Study Checklist, Module 8 Module 9: Module 9 Core Concepts Soil- and Arthropod-Borne Bacterial Infections, Sexually Transmitted Bacterial Infections Powerpoint Homework Assignment 4, Case Study Checklist, Module 9 EXAM 3 Module 10: Module 10 Core Concepts Fungal Infections Powerpoint Homework Assignment 5, Case Study Checklist, Module 10 Module 11: Module 11 Core Concepts Parasitic Infections Powerpoint Homework Assignment 6, Case Study Checklist, Module 11 Module 12: Module 12 Core Concepts Parasitic Infections Powerpoint Supplemental Reading: Case Study Checklist, Module 12 EXAM 4 Quiz 7: Introduction to Epidemiology Discussion 3 Quiz 8: Air-, Food-, and Waterborne Bacterial Infections Discussion 4 Quiz 9: Soil- and ArthropodBorne Bacterial Infections, Sexually Transmitted Bacterial Infections Homework 4 EXAM 3 Quiz 10: Fungal Infections Homework 5 Quiz 11: Parasitic Infections Homework 6 Quiz 12: Viral Infections Discussion 5 EXAM 4 7