Supporting Materials and Methods: Partial Hepatectomy and Carbon Tetrachloride (CCl4) Treatment: Mice were subjected to twothirds partial hepatectomy using standard methodology as described previously (1-4). First, they were sedated with inhaled Isoflurane (VEDCO, Inc., St. Joseph, MO) via anesthesia vaporizer, then subjected to mid-ventral laparotomy with exposure, ligation and resection of the left and median hepatic lobes, and closure of the peritoneal and skin wounds. Some animals were treated with leptin supplementation using a regimen shown to rescue impaired regeneration in ob/ob mice (see below and (5)); some were subjected to one-third partial hepatectomy, in which only the median lobes of the liver were resected; and some were treated with one dose of CCl4 (2 l/g of 50% solution in mineral oil) or vehicle. At serial times after surgery or CCl4 treatment animals were sacrificed by inhaled CO2 and plasma and liver tissue were harvested. Very little morbidity or mortality occurred in experimental animals (summarized below). Blood glucose was determined immediately prior to sacrifice as described (6). Three or more animals were examined at each time point for each genotype, surgical, and treatment group. All experiments were approved by the Animal Studies Committee of Washington University and conducted in accordance with institutional guidelines and the criteria outlined in the “Guide for Care and Use of Laboratory Animals” (NIH publication 86-23). Leptin Supplementation: Some mice were treated twice daily with 50 g/kg recombinant mouse leptin (R&D Systems, Minneapolis, MN) or vehicle (20 mM Tris-HCl, pH 8) by subcutaneous injection beginning 12 hours prior to partial hepatectomy and continued through the time of animal sacrifice. Morbidity and Mortality after Partial Hepatectomy or CCl4 Treatment: A total of 5 out of 162 operated mice (4/60 C57Bl6/J, 0/60 +/+ or fld/+, and 1/42 fld/fld) exhibited morbidity (e.g. decreased activity, tremor, pilorection prior to harvest and/or hepatic tissue necrosis at harvest) and these animals were excluded from further analyses. Mortality after partial hepatectomy occurred in 4 mice including 1/60 C57Bl6/J, 0/60 +/+ or fld/+ mice, and 3/42 fld/fld mice. Mortality after CCl4 administration occurred in ¼ fld/+ and 4/4 fld/fld mice (see Results). Histology and Immunohistochemistry: Liver histology and hepatocellular bromodeoxyuridine (BrdU) incorporation were assessed as previously described (2;3). Briefly, animals were injected with 100 mg/kg BrdU 1 hour prior to sacrifice. Formalin-fixed, paraffin-embedded liver tissue was stained either with hematoxylin and eosin (H&E) or for nuclear BrdU incorporation. Hepatocellular nuclear BrdU labeling and mitoses were quantified by examination of at least three random 400x fields and at least 300 cells and nuclei in each tissue section. Protein Expression Analysis: Tissue lysates were made and protein immunoblot studies conducted as described previously (1;3). Primary antibodies for these analyses included those directed against STAT3, phospho-STAT3, p21 and p27 (Cell Signaling Technology, Beverly, MA); adiponectin (Sigma, St. Louis, MO), and Cyclin D (Millipore, Burlington, MA). Semiquantitative Real-Time RT-PCR Gene Expression Analysis: Total RNA was prepared from mouse liver tissue, reverse-transcribed to cDNA, and analyzed for levels of expression of specific genes of interest using real-time reverse-transcriptase polymerase-chain-reaction (RTPCR) as described previously (2). For each gene analyzed, an aliquot of cDNA was added to a reaction mixture containing gene-specific forward and reverse primers, deoxynucleotides, Taq DNA polymerase, and SYBR (Agilent, Santa Clara, CA). Quantification of cDNA was based on monitoring increased SYBR fluorescence during exponential phase amplification in a Real-Time PCR Machine (Agilent), and determination of the PCR cycle number at which the amplified product exceeded a defined threshold (the ‘crossing threshold’). These data were also standardized to the expression of 2-microglobulin, which is commonly used as a reference gene in analyses of regulation of gene expression during liver regeneration (7-10), and exhibits an expression pattern homologous to other genes used for this purpose (e.g. -actin (11) and glyceraldehyde-3-phosphate dehydrogenase (12)). These standardized data were used to calculate fold-differences in gene expression. Specificity of this assay was verified for each gene under analysis by confirmation of predicted product size and uniformity using melt-curves and agarose-gel electrophoresis of the PCR products. Specificity was further confirmed by simultaneous analysis of a “reverse-transcribed” reaction mixture containing all components except reverse transcriptase. Gene specific primers: 2-microglobulin: forward 5’-TGGCTGCTTCTTTCGATTTCTG-3’, reverse 5’-CCAGAAAACCCCTCAAATTCAAG-3’; cyclin D1: forward 5’GAAGGAGACCATTCCCTTGA-3’, reverse 5’- GTTCACCAGAAGCAGTTCCA-3’; C/EBP: forward 5’-CCTGAGAGCTCCTTGGTCA-3’, reverse 5’-GAAACCATCCTCTGGGTCTC-3’; C/EBP forward 5’-ACGACTTCCTCTCCGACCT-3’, reverse 5’GAGGCTCACGTAACCGTAGTC-3’. Analysis of Body Composition: Total body fat and lean mass were determined by magnetic resonance spectroscopy using a calibrated EchoMRI instrument (Echo Medical Systems, Houston, TX) according to the instrument manufacturer’s instructions. 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