EPI-VAC (Identification of novel HIV-1 epitopes as

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Summary of the Final Activity Report and of the Final plan for Using and

Disseminating the Knowledge.

According to the envisioned activities of the EPIVAC project, the Final Activity Report and the document of the Disseminating the Knowledge includes the following results:

A.

Summary of the Final Activity Report.

WP1-Task1. Selection of neutralising antibodies out of a pool of HIV-specific monoclonal antibodies

Responsible Unit: Gabriela Stiegler/Polymun Scientific

Specific results :

The screening of antibodies out of a pool of 28 mAbs, directed to either gp41 (1A1, 1F11, 1H5,

2B12, 3A11, 3B7, 3D6, 3D9, 3F6, 3H12, 4B3, 4D4, 4G2, 5F3, 5G7, 6F8/5A6, 24G3, 25C2) or gp120 (1B1, 1F7, 1G2, 1G7, 2D12, 2G6, 3D12,4B1, 5G7, 3D5) of HIV-1, which were established in parallel to 2F5, 2G12 and 4E10 but not characterized.

The screening of antibodies out of a pool of 28 mAbs, directed to either gp41 (1A1, 1F11, 1H5,

2B12, 3A11, 3B7, 3D6, 3D9, 3F6, 3H12, 4B3, 4D4, 4G2, 5F3, 5G7, 6F8/5A6, 24G3, 25C2) or gp120 (1B1, 1F7, 1G2, 1G7, 2D12, 2G6, 3D12,4B1, 5G7, 3D5) of HIV-1, which were established in parallel to 2F5, 2G12 and 4E10 but not characterized.

Additionally, monoclonal antibodies towards p24 (37G12 and IAM M01 16/4/11) were produced from hybridoma cells and purified by means of a protein A capture column.

WP1-Task2. Isolation and characterisation of novel HIV-1 clade C viral isolates from recently infected subjects (to be used for the neutralisation assay).

Responsible Unit: Gabriela Stiegler

The aim of WP1-Task2 was to isolate Clade C isolates from recently HIV-1 infected donors. Originally, the laboratory of Glenda Gray (South Africa) was selected as source for samples.

Results

Four isolates (ZA349, ZA562, ZA600, ZA737) were tested for neutralisation sensitivity to C2F5, C2G12,

C4E10, the C2F5/C2G12 combination and the C2F5/C2G12/C4E10 combination.

Workpackage 2. Optimisation of vaccine delivery.

WP2-Task1. Peptide mimotopes delivered as immunogenic dendrimers of 20-60 kDa particles.

To fulfill the proposed task computational and advanced chemical methods were used, and the following activities were performed:

1. Synthesis of analogs with different substitutions and deletions, to determine the amino acids essential for binding, as well as the shortest sequence necessary for activity.

2. Synthesis and characterization of constrained analogs, through systematic variations in key positions of the sequence and introduction of molecular tools able to freeze linear and cyclic peptides in a well-defined three-dimensional structure.

Results: A set of peptides was retrieved by RPL; peptide epitopes were identified by screening the library with mAbs 2F5 and 4E10.

WP2-Task 2. Peptide mimotopes delivered as fusion products with protein carriers that stimulate both systemic and mucosal immunity.

Responsible Unit: Giuseppe Scala

Results:

A. The mimotope BS-RY (a peptide mimotope of the gp120 Bridging sheet) was folded in the context of the E2 protein, a subunit of the bacterial pyruvate deidrogenase.

In further work, sera IgG isolated from sera of rabbits immunised with the E2-BS protein-mimotope complex were shown to neutralise viral isolates, including SF162.LS, HIV.0012466-2.52 and NL-ADArs.

In a distinct set of experiments, we selected peptide mimotopes of the gp41 protein sequences corresponding to the a, immune dominant epitope;

WP2-Task3. Optimisation of the Liposome technology to deliver HIV-1 peptides and proteins

Responsible Unit: G. Stiegler

The aim of the project was the development of an efficient adjuvant based on the liposome technology.

Results:

A. DLS measurement results of two preliminary liposome preparations using PBS buffer only.

B. Liposome size (nm) for four different mimotope/liposome preparations during different preparation steps.

WP3-Task1.

Immunisation of animals with selected vaccine candidates.

Responsible unit: B. Ferko.

Results:

A. Data regarding the immunegenicity in rabbits of the liposome-peptide preparation.

WP3-Task2. Assessment of neutralizing activity of sera from immunized mice.

Responsible unit: D. Davis.

Results:

A.

Quantitative data regarding the neutralizing activity of sera from immunized animals.

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Section 2 – Dissemination of knowledge

The dissemination activities section should include past and future activities and will normally be in the form of a table maintained by the coordinator or any other person charged with controlling the dissemination activities .

Overview table

Planned

/actual

Dates

Type

Press release

Decemb er 2008

Novemb er 2008

None

Decemb er 2008

Media briefing

Conference

Exhibition

Publications

Project web-site

Posters

Flyers

Direct e-mailing

Film/video

Type of audience Countries addressed

Scientific audience Internatio nal

Higher education

Research

Industry ( sector x)

Research

None

Internatio nal

None

Internatio nal

Scientific audience Internatio nal

Size of audience

Partner responsible

/involved

Unknown Polymun

DBBM

None

200

None

None

None None

Unknown Polymun

DBBM

Unknown Polymun

DBBM

Section 3 - Publishable results and patenting

A. Identification and chemical synthesis of peptides and proteins that stimulate an anti-

HIV immune response. The novel immunogens are expected to be non-toxic.

B. When validated in monkeys models of SHIV/SIV infection, the novel immunogens are expected to share a substantial percentage of the vaccine market.

C. The project is at the development stage of validating the immune properties in rabbits; further support is required to proceed toward the non-human primate models.

Collaboration sought or offered (manufacturing agreement, financial support or investment, information exchange, training, consultancy, other)

Collaborations are welcomed from pharmaceutical companies and private/public

Institutions.

Collaborator details (type of partner sought and task to be performed)

A. The partner should be either a private –non-profit organization, or a company involved in vaccine development.

Intellectual property rights granted or published

A. The strategy and the single peptides/proteins are being covered by patenting.

Contact details: Giuseppe Scala, M.D., Ph.D.

Department of Biochemistry and

Medical Biotechnology

University Federico II

Via S. Pansini 5,

80131 Naples, ITALY

Tel: 39-081-746-3157 (lab)

Tel: 39-081-746-3622 (office)

Tel (mobile): 39-340-7760115

Fax: 39-081-746 2685

E-mail: scala@dbbm.unina.it

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