BDNF/TRKB Signaling Pathway Altered by Six Weeks of Exercise in the Aged APOE4 Alzheimer’s Mouse Model Joseph Maged Seif Mentor: Carl W. Cotman ApoE4 is a risk factor gene for Alzheimer’s disease. This study explores potential cellular mechanisms by which exercise improves the cognitive performance in the ApoE4 targeted replacement mouse model, using the ApoE3 targeted replacement as a control. After six weeks of ad libitum running, sedentary and run animals (eight E3 sedentary, eight E3 run, seven E4 sedentary, and eight E4 run) were cognitively tested on single (place recognition) and multiple-day (radial arm water maze), hippocampus-dependent memory tasks. The animals were sacrificed and testing and quantification of four hippocampal proteins—BDNF, TrkB, PAK, and synaptophysin—took place using ELISA and Western blots. Run mice from both genotypes improved equally on the place recognition task (single day), while only the exercised ApoE4 mice improved on the radial arm water maze task (multiple-day). BDNF increased similarly in both genotypes with running (p<0.05); however, a significant interaction of genotype and condition existed for TrkB, PAK, and synaptophysin (p<0.05; p<0.01; p<0.01, respectively). Posthoc tests revealed that increases in the levels of the aforementioned proteins were largely restricted to the ApoE4 genotype. The increased levels of synaptophysin indicate increased synaptogenesis, which may explain the differential improvement in ApoE4 running mice on cognitive tasks involving multiple days. This may provide hope for controlling the cognitive deficits of ApoE4 Alzheimer’s carriers, by means of increased synaptogenesis through exercise intervention.