1#___ Name:_____KEY___________ Date:______ Period: _____ DNA: The Molecule of Heredity & Understanding How Your Body Works!...“From Gene to Protein” Note-Taking Sheet- (Keep in your Notebook to study!) Today we will learn: The structure and purpose of DNA & RNA We will investigate 3 major processes that involve DNA & RNA A. Semiconservative replication= the process of copying/doubling the amount of DNA prior to cell division so the daughter cells both get a full set. The next two processes occur back to back, and this is how your genes make your body work. Each gene codes for specific protein(s) each individual cell needs to function properly and keep you alive. Many of these proteins are enzymes that speed up reactions, some are structural proteins, and they make other types of proteins that are important for your cells to function. This process of going from Gene to Protein occurs in two stages: B. Transcription= process of copying the gene on the DNA strand into a working copy of mRNA. C. Translation=the process of building a protein using the “working mRNA copy” of the original gene. Ok, now on with the show! So, what exactly is this DNA STUFF Anyway??? DNA’s Official Name: Deoxyribonucleic acid DNA is a type of nucleic acid Chromosomes (and genes) are made of DNA Putting it all together: Chromosomes are long strands of DNA-> each contain many genes-> which is a section of DNA that codes for a trait. Each section of DNA is made of individual nucleotide subunits that are read in sets of three.) DNA is made up of repeating nucleotide subunits. (3 million base pairs!) Each nucleotide represents half of the helix and consists of a 1. phosphate group, 2. Sugar, and 3. nitrogenous base. Deoxyribose Sugar Phosphate Group Nitrogenous Base Adenine Of bases: Guanine Cytosine Thymine 4 types Has 2 strands, so bases can pair up o A binds T only (Think “at”) o C binds G only Strand 1 Strand 2 P S Remember P A T P S (A) (G) (C) (T) S DNA is like an Oreo P C G S Phosphates + sugar = cookies bases = cream filling Bases on the ladder’s steps (Bases fit like puzzle pieces) Phosphates + sugars on the sides Shape is a Double Helix o Double helix: 2 spirals wound around each other o Rosalind Franklin took an X-ray photo of DNA. o James Watson and Francis Crick interpreted the photo and discovered the double helix structure. They won the Nobel Prize. Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 2 of 12 Triplet= Group of 3 DNA bases that represents the matching set for the codon CODON= 3 bases on mRNA; (which is the complement “copy” of the DNA triplet) Genes: stretch of DNA that codes for a trait. (20,000 protein coding genes) o The code is the order of the bases (letters) o Genes are hundreds or thousands of bases long Eye color gene Dimples gene Hair color gene Chargaff’s Rule A scientist named Chargraff measured the amount of each base in DNA samples and determined how they fit together based on the % of each. HIS FINDINGS= In DNA, the amount of Adenine = the amount of Thymine the amount of Cytosine = the amount of Guanine Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 3 of 12 So, they figured out that the DNA HELIX is Complementary! Complementary: bases on one strand of the helix match up with the bases on the other strand (A-T and G-C) Example: Strand 1- A T G G G C C T A Strand 2- T A C CCG G A T During S-phase of Interphase, the DNA is replicated (copied) so there are 2 individual sets of DNA for each new daughter cell. This Synthesis phase is when DNA Replication occurs. But it took a while for scientists to figure out how it happened. DNA Replication Replication is the process by which DNA copies itself Happens during S-phase of Interphase when chromosomes copy themselves before mitosis and meiosis. Semi-conservative replication: Each new piece of DNA is made up of 1 original strand and 1 new strand Original DNA helix Helicase (enzyme) unzips DNA polymerase enzyme that copies & proof reads) Each original strand into a new strand; which limits errors!! DNA never ever leaves the nucleus DNA is the master copy (or master blueprint) of the directions a cell needs to live so it needs to be protected DNA in the nucleus is Sheet: From Gene to Protein Mrs. Lambert’s Note-taking safe! But DNA in the cytoplasm can be Page 4 of 12 destroyed mRNA is a working copy of DNA that goes out into the cytoplasm to tell the cell what to do in order to stay alive & perform all of its duties. RNA: nucleic acid You can always make more RNA, so it’s ok if it gets destroyed RNA is divided into 3 types, each with a different job. 1. mRNA (messenger RNA) = working copy of the gene 2. tRNA (transfer RNA) = is a mini shuttle (bus) to take amino acids to mRNA 3. rRNA (ribosomal RNA) = makes up ribosomes which is the “protein factory” DNA 2 How many strands? Nucleotide subunit Bases Phosphate Group deoxyribose ______________ Sugar RNA 1 Nitrogen Base Deoxyribose sugar Thymine (T) T–A Adenine (A) Guanine (G) G–C Cytosine (C) Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Phosphate Group Ribose Sugar Nitrogen Base Ribose sugar Uracil (U) U–A Adenine (A) Guanine (G) G–C Cytosine (C) Page 5 of 12 UNDERSTANDING TRANSCRIPTION- From DNA-> mRNA Transcription- the process of making a mRNA “working copy” of the “master gene” made of DNA The type of RNA made is called mRNA (messenger RNA) because it sends a message from DNA to the cytoplasm DNA safe in the nucleus Uses mRNA (working copy of the gene) To send a message to the cytoplasm Transcription- Happens Like This: 1. An enzyme called Helicase unzips the DNA 2. An enzyme called RNA polymerase copies the exposed DNA strand and matches up bases to make a “working copy” of it called mRNA. 3. mRNA separates from the DNA 4. mRNA moves out of the nucleus through nuclear pores and into the cytoplasm What is different about the RNA bases? DNA: GAG AAC TAG TAC RNA: CUC UUG AUC AUG That is right! RNA doesn’t have T; it has U For figuring out RNA: A binds U C binds G Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 6 of 12 OVERVIEW OF TRANSCRIPTION! DNA mRNA mRNA A Cytoplasm of cell Nucleus Transcription happens in the nucleus. An mRNA copy of a gene is made. Then the mRNA that has been made moves out of the nucleus into the cytoplasm Once in the cytoplasm, the mRNA is used to make a protein. Which is called Translation! How does mRNA tell the cell what to do? mRNA is a message that codes for a protein Proteins are made in the cytoplasm and then work to keep the cell alive Translation (protein synthesis): Process of making a protein Proteins are made up of amino acids (small building blocks) There are 20 different types of amino acids Protein Amino Acids Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 7 of 12 Nucleus Process of Translation 1. mRNA moves OUT of nucleus and into cytoplasm Cytoplasm 2. mRNA attaches to a RIBOSOME 3. Transfer RNA (tRNA) shuttles the matching Amino Acid to the mRNA/Ribosome complex to build up the protein tRNA Ribosome Amino acid Anticodon (3 bases on tRNA): Matches up to the Codons on mRNA 4. PROTEIN! (chain of amino acids) detaches from ribosome and goes off to work in the cell Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 8 of 12 Genetic Code- “An individual’s sequence of genes that code for proteins and noncoding regions. This is also called the GENOME! DNA- mRNA Protein. The chain of amino acids is the protein. mRNA codons (3 bases) Pairs with anticodons on tRNA thus delivering the next Amino acid. Start codon- indicates the beginning of the gene and the Stop codon – codes for the end of the mRNA (no amino acid added) 1. Read your mRNA codon ACU 2. Find 1st base on the left, 2nd base on the top, 3rd base on the right. Find where they all cross in the chart. 3. Read your amino acid. Threonine There are different codons code for different amino acids!!! Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 9 of 12 Central dogma of molecular biology Transcription DNA Directions to make proteins are safely stored in the nucleus Translation mRNA Carries the directions to the cytoplasm Protein Work to keep the cell alive **Now lets talk about when things don’t work as planned… Mutations a CHANGE in the DNA sequence It’s a mistake that’s made during replication or transcription can be harmful: cancer or deformities helpful: organism is better able to survive neutral: organism is unaffected if a mutation occurs in a sperm or egg cell, that mutation is passed on to offspring (germline mutation) if a mutation occurs in a somatic cell, that mutation affects only the organism and is NOT passed onto offspring Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 10 of 12 Types of mutations 1. Point mutations: BASES are mismatched Harmful when: a mistake in DNA is carried into mRNA and results in the wrong amino acid Correct DNA Correct mRNA GAG CTC Point mutation in DNA GCG CTC Correct amino acid CUC Leucine Mutated mRNA Wrong amino acid CGC Arginine A should pair with T, but instead C is mismatched to T Not harmful when: a mistake in DNA is carried into mRNA but still results in the correct amino acid 2. Frameshift mutations: bases are inserted or deleted Are usually harmful because a mistake in DNA is carried into mRNA and results in many wrong amino acids Correct DNA: ATA TAT CCG GGC TGA ACT Correct mRNA: UAU GGC ACU Correct amino acids: Tyrosine Glycine Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Threonine Page 11 of 12 Extra inserted base shifts how we read the codons (3 bases), which changes the amino acids Frameshift mutation in DNA: ATG TAC ACC TGG GTG CAC A T Mutated mRNA: UAC UGG CAC U Wrong amino acids: Tyrosine Tryptophan Histidine 3. Chromosomal mutations chromosomes gained or are lost during mitosis or meiosis broken chromosomes may rejoin incorrectly almost always deadly when it occurs in a zygote Causes of mutations Mutagens are anything that can cause a change in DNA; Examples: X rays, UV light (sunlight), nuclear radiation, asbestos, cigarette smoke Usually, harmful mutations are most commonly discussed if something is mutagenic, but it doesn’t have to be harmful. Carcinogens= include any agent that causes cancer. (90% of these agents are also mutagens because it caused a changed in the DNA that lead to developing cancer.) Mrs. Lambert’s Note-taking Sheet: From Gene to Protein Page 12 of 12