Low-flow hydrological monitoring and modelling gaps D. Barma1 and L.Lowe2 1. Barma Water Resources 2. Sinclair Knight Merz Low flows report series – June 2012 Low flows report series This paper is part of a series of works commissioned by the National Water Commission on key water issues. This work was undertaken by Barma Water Resources and Sinclair Knight Merz Ltd on behalf of the National Water Commission. NATIONAL WATER COMMISSION — Low flows report series iii © Commonwealth of Australia 2012 This work is copyright. Apart from any use as permitted under the Copyright Act 1968, no part may be reproduced by any process without prior written permission. Requests and enquiries concerning reproduction and rights should be addressed to the Communications Director, National Water Commission, 95 Northbourne Avenue, Canberra ACT 2600 or email bookshop@nwc.gov.au. Online/print: ISBN: 978-1-921853-86-9 Published by the National Water Commission 95 Northbourne Avenue Canberra ACT 2600 Tel: 02 6102 6000 Email: enquiries@nwc.gov.au Date of publication: June 2012 An appropriate citation for this report is: Barma D & Lowe L 2012, Low-flow hydrological monitoring and modelling gaps, National Water Commission, Canberra. Disclaimer This paper is presented by the National Water Commission and does not necessarily reflect the views or opinions of the Commission. NATIONAL WATER COMMISSION — Low flows report series iv Contents Contents ................................................................................................................................................ v Executive summary ............................................................................................................................. vii Report context ....................................................................................................................................... x Introduction........................................................................................................................................... 1 Project scope and approach ...................................................................................................... 1 Report structure ......................................................................................................................... 1 PART I: Identifying gaps and limitations .............................................................................................. 3 1.Low-flow indicators ............................................................................................................................ 4 1.1.Introduction .......................................................................................................................... 4 1.2.Prioritisation of low-flow indicators ....................................................................................... 4 1.3.Deriving time-series streamflow data................................................................................... 7 1.4.Summary.............................................................................................................................. 9 2.Measuring and monitoring low flows ............................................................................................... 10 2.1.Introduction ........................................................................................................................ 10 2.2.Streamflow measurement using a rating curve ................................................................. 10 2.3.Satellite remote sensing .................................................................................................... 11 2.4.Other techniques for streamflow measurement ................................................................. 13 2.5.Monitoring networks ........................................................................................................... 13 2.6.Summary............................................................................................................................ 14 3.Estimating low flows at ungauged sites .......................................................................................... 15 3.1.Introduction ........................................................................................................................ 15 3.2.Streamflow transposition ................................................................................................... 15 3.3.Catchment modelling ......................................................................................................... 16 3.4.Direct estimation of low-flow indicators.............................................................................. 18 3.5.Comparison of techniques ................................................................................................. 19 3.6.Summary............................................................................................................................ 19 4.Estimating low flows in regulated systems...................................................................................... 21 4.1.Introduction ........................................................................................................................ 21 4.2.Water resource system models ......................................................................................... 21 4.3.Summary............................................................................................................................ 23 5.Quantifying anthropogenic influences ............................................................................................. 25 5.1.Introduction ........................................................................................................................ 25 5.2.Direct extractions ............................................................................................................... 25 5.3.Farm dams ......................................................................................................................... 26 5.4.Groundwater extractions .................................................................................................... 26 5.5.Land use change ............................................................................................................... 26 5.6.Wastewater treatment plant discharges ............................................................................ 27 5.7.Summary............................................................................................................................ 27 6.Mechanisms generating low flows .................................................................................................. 29 6.1.Introduction ........................................................................................................................ 29 6.2.Identifying and monitoring sources of low flow .................................................................. 29 6.3.Modelling ............................................................................................................................ 29 NATIONAL WATER COMMISSION — Low flows report series v 6.4.Summary............................................................................................................................ 30 7.Hydraulic characteristics ................................................................................................................. 31 7.1.Introduction ........................................................................................................................ 31 7.2.Hydraulic modelling............................................................................................................ 31 7.3.Summary............................................................................................................................ 32 8.Summary of issues and gaps .......................................................................................................... 33 PART II: Identifying solutions ............................................................................................................. 37 9.Proposed solutions .......................................................................................................................... 38 9.1.Introduction ........................................................................................................................ 38 9.2.Proposed solutions ............................................................................................................ 38 9.3.Key proposed solutions ..................................................................................................... 44 Appendices ........................................................................................................................................ 49 References ......................................................................................................................................... 79 Tables Table 1: Water resource system models ............................................................................................ 21 Table 2: Summary of identified gaps for monitoring and modelling low flows .................................... 34 Table 3: Summary of solutions to gaps in monitoring and modelling low flows .................................. 39 Figures Figure S1: Context of reports produced for the National Water Commission's Low Flows Project. ......x Figure 1: Illustration of difference in impact of a fixed reduction in average flows on two systems of differing variability (the average flows under natural and current conditions is the same for both cases, but the significance of the impacts is greater for biota adapted to a system of low variability). Source: SKM (2005) .................................................................................................... 6 Figure 2: Derivation of a flow time-series at a gauged and unregulated site ........................................ 7 Figure 3: Derivation of a flow time-series at an ungauged and unregulated site.................................. 8 Figure 4: Derivation of a flow time-series at a regulated site ................................................................ 8 NATIONAL WATER COMMISSION — Low flows report series vi Executive summary The National Water Commission’s low flows project aims to provide water planners and managers with better information and tools to manage low flows. The first stage of the project is a scoping study intended to provide clear direction to the Commission on priorities for further work in two key areas: 1) monitoring and modelling of low flows and, 2) ecological knowledge needs with respect to low flows. This report covers the first area, summarising gaps and limitations with respect to monitoring and modelling low flows and proposing possible solutions to address these. It is intended that the solutions presented will be refined, prioritised and improved through consultation with the project advisory group. The outcomes will set the direction for further work in Stage 2 of the low flows project. Part 1 of this report identifies and discusses seven groups of gaps and limitations associated with monitoring and modeling low flows, as highlighted in bold text below. Low-flow indicators provide one means to objectively assess risks due to changes in the low-flow regime. A plethora of different hydrological indicators has been developed and used to characterise a flow regime, both in Australia and overseas, and 28 ecologically-relevant hydrological indicators have been identified here that characterise low flow at a site (Appendix A). Calculating low-flow indicators is relatively straightforward if a time-series of daily streamflows is available, however the derivation of daily streamflow datasets presents a challenging practical problem. Key issues and gaps associated with generating streamflow datasets are: Measuring low flows to assist in achieving environmental and other objectives that are affected by low flows is difficult compared to measuring average flows. For example streamflow gauging using a rating curve is subject to large errors at low flows and alternative gauging techniques, such as ultrasonic meters, may provide a more accurate alternative. Also the current spatial coverage and monitoring frequency of streamflows and diversions, and of any management rules associated with these, may be inadequate to measure and hence safeguard the flow regime provided to meet the ecological needs described in water plans. From an ecological measurement perspective, streamflow gauges would ideally be located at ecologically relevant locations, or at least at locations where the flow characteristics were representative of the relevant location. Historically this has not been the case with the location of streamflow gauges typically being driven by the needs of managing a water supply for extractive users as opposed to the environment. A substantial amount of effort is required to adequately estimate a time-series of daily streamflows at an ungauged site. Rainfall-runoff models are commonly used to estimate streamflows, but the relative ability of widely available rainfall-runoff models to represent low flows and the best approach to calibrate them for low flows is not widely understood. The main limitation of using water resource system models to estimate low flows at a regulated site is the poor representation of river losses and daily operating rules in these models. The focus of model calibration is also an important factor in the accuracy of the low flows modelled at the sites of interest. There are difficulties in deriving daily time-series of flow that represent historical, current and natural conditions. The main challenge relates to the quantification of anthropogenic influences on streamflows. Planners and managers need to understand the mechanisms that generate low flows. The prediction of low flows under possible scenarios (e.g. climate change) will be improved if the processes that produce low flows are better understood. Water managers would be able to more efficiently address issues of stress during low-flow periods if the drivers of these events were known. However, the mechanisms that generate low flows are generally not well understood. Recently there have been developments in combined groundwater and surface water modelling, but there have been few studies to monitor surface water/groundwater interactions. NATIONAL WATER COMMISSION — Low flows report series vii From an ecological perspective it is important to consider the magnitude of low flows in conjunction with the hydraulic characteristics of the stream. Considerable time and expense is required to understand the hydraulic characteristics of a stream and at present little information is available to help water managers understand the longevity of pools during a cease-to-flow event. Due to the difficulty in obtaining hydraulic information, low-flow indicators have typically been used as a surrogate for hydraulic information. Part 2 of the report briefly identifies possible solutions to the 50+ gaps identified in Part 1. It then describes 11 proposed solutions to address key low flows gaps and needs in more detail. These were identified and developed with the assistance of input from a workshop involving specialists with knowledge and experience of low-flow hydrology, water resource supply modelling, hydraulic modelling, hydrography and ecology. The proposals are: Develop low-flow indicators for regional comparison Being able to compare a flow regime at the regional scale is often required. A rangestandardised approach has been adopted in other studies of flow indicators and the concepts developed in these studies should be applied to low-flow indicators to enable regional comparisons. Improve awareness of the uncertainty associated with low-flow indicators The derivation of daily streamflow data relies on a series of assumptions, all of which will introduce uncertainty and affect the accuracy of the low-flow indicators. While the accuracy will depend on many site-specific factors, water managers may benefit from assistance with likely accuracy and ways to decrease uncertainty. The outcome of this proposal is clear guidance on the likely magnitude of uncertainty in low-flow indicators; methods and tools to quantify the uncertainty; an understanding of the main factors contributing to the uncertainty; as well as guidelines for using this information to improve decision making. Improve the availability of streamflow information and metadata Streamflow information should be readily available and metadata provided to allow planners and managers to assess whether streamflows measured or modelled at a site are suitable for a particular purpose. A database of all Australian streamflow gauges that allows users to assess the suitability of data for a particular purpose should be the result of this proposal. Increase metering and monitoring of ecologically relevant sites Not all ecologically relevant sites are currently metered. This proposal would identify ecologically relevant sites that are not currently monitored and assess the benefit of metering compared with the investment required. Develop guidelines for estimating low flows The outcome of this proposal will be guidelines that recommend an appropriate model selection and calibration strategy for low flows, leading to improved modelling of low flows. Improve understanding of the location and longevity of pools and waterholes At present little information is available to help water managers understand the longevity of pools during a cease-to-flow event. This proposal will map the location of pools and waterholes and develop models to predict the persistence of these waterbodies. Improved representation of losses in water resource supply models Guidelines that outline best practice are required to improve the representation of losses in these models. Adoption of a consistent and improved modelling approach will give planners and managers greater confidence in the estimates of low flows generated by water resource supply models. Develop a business case for smart metering NATIONAL WATER COMMISSION — Low flows report series viii A business case for the use of smart meters on private diversions and other extractions could be used to identify when and where smart meters are economically advantageous to install and use. Improve modelling of daily irrigation water use Estimates of irrigation water use on a daily time-step are poor because they do not account for irrigator behaviour that may be responding to other drivers, such as allocation announcements and commodity prices. More sophisticated models are required to reflect the uncertainty in irrigator behaviour. Improve understanding of seasonal impacts of land use change on low flows The seasonal impact of land use change on streamflows is not very well understood, but it is expected the impact will be greater during lows flows than other parts of the flow regime. This proposal will investigate seasonal variation in the impact of land use on flows. Review mechanisms that generate low flows An understanding of the mechanisms that generate low flows is required to predict the impact of climate change scenarios on low flows and to more effectively address issues of stress during low-flow periods. A comprehensive review of the existing literature is required to summarise the state of knowledge, identify key gaps and propose a research agenda to improve knowledge related to the drivers of low-flow events. NATIONAL WATER COMMISSION — Low flows report series ix Report context This report is part of a larger series of reports produced for the National Water Commission’s Low Flows Project (Figure S1). Hydrological modelling practices for estimating low flows – guidelines Hydrological modelling practices for estimating low flows – stocktake, review and case studies Low flow hydrological monitoring and modelling needs Guidance on ecological responses and hydrological modelling for low-flow water planning Low flow hydrological classification of Australia Early warning, compliance and diagnostic monitoring of ecological responses to low flows Review of literature quantifying ecological responses to low flows Synthesis of case studies quantifying ecological responses to low flows Eleven case study reports quantifying ecological responses to low flows Figure S1: Context of reports produced in the National Water Commission's Low Flows Project (group one, teal = modelling-related reports; group two, green = Waterlines report; group three, orange = ecology-related reports). NATIONAL WATER COMMISSION — Low flows report series x Introduction Project scope and approach Low flows are critical for sustaining ecosystems during dry periods by maintaining water availability and quality. Knowledge of low-flow behaviour is increasingly important as water extraction grows and as the frequency and/or duration of drought conditions increase. The National Water Commission has initiated a low flows project to provide water planners and managers with better information and tools to achieve environmental and related objectives affected by low flows. This project’s first stage is a scoping study intended to provide clear direction to the Commission on priorities for further work in two key areas: a. monitoring and modelling of low flows; and b. ecological knowledge needs related to low flows. This report focuses on the first key area. It summarises the limitations, issues and gaps with respect to the monitoring and modelling of low flows to inform the setting and assessment of environmental flow and related objectives across Australia. It then proposes potential ways to address these. The initial draft was based on a literature review and the combined experience of the authors. The project then sought the input of specialists with knowledge and experience of low-flow hydrology, water resource supply modelling, hydraulic modelling, hydrography and ecology in order to a) confirm and/or further identify the key issues and gaps in current monitoring and modelling of low flows with a focus on achieving environmental flow objectives, and b) recommend solutions to address issues and fill gaps. The proposals (and gaps) in this report will be considered and prioritised by an advisory group of water planners and managers to assess, for example, how readily achievable they are, and whether state agencies or other institutions already have actions in place to achieve them. Priority solutions will be progressed in Stage 2 of the Low Flows project. Report structure The information presented in this report is divided into two parts. Part I: Identifying gaps and limitations A comprehensive review of the monitoring and modelling of low flows is provided in Part I. ARI reviewed and developed a list of low-flow indicators that are ecologically relevant (Rolls et al. 2010). The ability to measure or estimate these low-flow indicators is discussed in Chapter Error! Reference source not found.. Wherever possible and appropriate to the scenario of interest, low-flow indicators are calculated using measured historical streamflows. The effectiveness of current streamflow monitoring is reviewed in Chapter 2. Where streamflow measurements are not available other modelling techniques are required to estimate streamflows and these are addressed in Chapter 3. In Chapter 4 the estimation of low flows in regulated systems is addressed. In many catchments anthropogenic influences such as diversions, farm dams, groundwater extractions and land use changes may affect low flows and these are discussed in Chapter 5. In Chapter 6 the methods to monitor and model the mechanisms that generate low flows are discussed. Ecological processes are influenced by the water levels in a river and the use of hydraulic models to represent low-flow hydraulics is reviewed briefly in Chapter 7. The review leads to the identification of approximately 50 gaps in existing knowledge and these are listed in Chapter 8. NATIONAL WATER COMMISSION — Low flows report series 1 Part II: Identifying solutions Part II identifies possible solutions to the 50+ gaps identified in Part I. Solutions to address each gap are proposed in Section 9.2. The 11 key gaps and associated solutions arising from the workshop are described in more detail in Section 9.3. NATIONAL WATER COMMISSION — Low flows report series 2 PART I: Identifying gaps and limitations NATIONAL WATER COMMISSION — Low flows report series 3 1. Low-flow indicators 1.1. Introduction Low-flow periods are a natural feature of Australian river systems but can be a period of high stress for aquatic ecosystems. Decreasing the magnitude of low flows reduces the availability of in-stream habitat, which can lead to a long-term reduction in the viability of populations of flora and fauna. Extended durations of zero or cease-to-flow periods can also harm aquatic ecosystems since they can result in partial or complete drying of the channel. This may lead to loss of connectivity between pools and even complete loss of aquatic habitat. In regulated river systems the magnitude of low flows may be increased as rivers are used to convey water from a reservoir to users who require supply - such alteration to a more persistent flow regime can also have an ecological effect. Low-flow indicators provide one means to objectively assess the relative environmental risk due to changes in the low-flow regime. Typically these assessments look at changes in a low-flow indicator over time or as a result of increased anthropogenic influences in a catchment. Low-flow indicators can also be used to assess the benefits of alternative investment strategies. Accordingly, any change in low-flow indicators can be used in conjunction with an assessment of corresponding environmental values to help weigh up the benefits and disadvantages of any strategy that involves changes to the flow regime. A plethora of different hydrological indices has been developed and used to characterise the flow regime, both in Australia and overseas. As part of the Low Flows project 28 low-flow indicators have been identified from a review of literature related to low-flow ecology and indicators by the Australian Rivers Institute (Appendix A). This chapter first discusses how to select and prioritise useful low-flow indictors (Section 1.2). As the calculation of indicators typically requires a time-series of flow, the derivation of these time-series is introduced in Section 1.3. 1.2. Prioritisation of low-flow indicators Many low-flow indicators are available to characterise a flow regime and prioritisation of indicators is usually required based on criteria such as: clarity of the relationship between the indictor and an ecological response ease of measurement of the indicator sensitivity of the indicator to changes in flow behaviour ability to meaningfully compare the indicator between catchments ability to meaningfully compare the indicator over time. Each of these criteria is discussed below. 1.2.1. Clarity of the relationship between the indicator and an ecological response An overview of the links between low-flow indicators and ecological response is presented in Appendix A to justify each indicator. The importance of each low-flow indicator may vary between regions and this is discussed in the table. The geographical and regional variation in low-flow metric redundancy across Australia should be established. The statistical redundancy in the Appendix A indicators should also be determined since many of the low-flow indicators presented will be strongly correlated. One review of several studies investigating NATIONAL WATER COMMISSION — Low flows report series 4 the issue of interdependence (Smakhtin 2001) recommends that only one low-flow indicator is required, however the indicators considered in that review differ from those listed here and initial studies in the Low Flow ecology project (Figure S1) indicate that four to six indicators can generally characterise a low-flow regime. The indicators included in Appendix A relate to river flow however from an ecological perspective it is important to consider hydraulic characteristics in conjunction with flow. It would be useful to identify further potential low-flow indicators that relate to hydraulic characteristics (see Chapter 7). 1.2.2. Ease of measurement of the indicator Calculation of the low-flow indicators in Appendix A is relatively straightforward if a time-series of daily streamflows is available. However, derivation of the required streamflow datasets presents a challenging practical problem. It is the main focus of this review and is introduced in Section 1.3. Once a daily time-series of streamflows is developed, software packages are freely available that are capable of calculating most of the low-flow indicators from Appendix A. These packages include the River Analysis Package (RAP), which is available as part of the eWater toolkit (Marsh 2003), and AquaPak, which was developed by Dr Rory Nathan and is available on the SKM website (Gordon et al. 2004). Most of the indicators can be calculated using these packages directly, with the exception of the indicators related to antecedent and post low-flow event conditions. These indicators could be included in a software package if required. There are several methods available to calculate the Baseflow Index (BFI). The Lynn and Holick filter is commonly used. The results can be sensitive to the digital filter parameters selected by the practitioner. Work is underway to investigate appropriate values to adopt for those parameters. Due to the nature of the data available, monthly flows are generally more accurate than daily flows. However, ecological responses often occur due to flow events lasting only one or two days, and hence the flow indices presented in Appendix A are generally based on streamflows at a daily timestep. There are two possible approaches to address this mismatch. The first and preferred approach is to further improve the accuracy of daily streamflows. However, in some regions it may not be practical to obtain daily streamflows. In these regions a second approach may be required in which ecological indicators are developed to conform to the available monthly data. However, there is little in the way of monthly indicators that are ecologically meaningful. SKM (2005) addressed this issue by comparing daily and monthly flow indices and found the variability in 10 daily indices could be largely explained by five monthly indices. In data-poor regions the use of monthly indices that reflect ecologically meaningful daily indices may be required. 1.2.3. Sensitivity of the indicator to changes in flow behaviour The traditional approach to assessing flow stress involves identifying the differences between streamflow behaviour under current and natural 1 flow conditions. The low-flow indices can be calculated using data representing both these flow conditions. A large change in a low-flow indicator between natural and current conditions will represent a higher likelihood of ecological stress than a small change. A more meaningful assessment of ecological stress can be provided if the change observed in the indicator is put into its hydrologic context; that is, if the current low-flow indicator is compared with the range experienced under the natural flow regime. In other words, the ecological This is sometimes referred to as the ‘unimpacted’ or ‘pre-development’ condition as it represents the streamflow that would occur if all anthropogenic extractions and diversions ceased, under current (or possibly historic) conditions of land use cover. 1 NATIONAL WATER COMMISSION — Low flows report series 5 stress is likely to be greater if the current flow regime sits outside the variability observed in the natural flow regime. Figure 1 illustrates the difference in the impact of a fixed reduction in average flows in two systems of differing variability. The same concept can be applied to other flow indices, including indices that reflect the magnitude and frequency of low flows. SKM (2005) developed a nonparametric approach to compare current and natural flow indices in which the degree of flow stress is standardised by reference to the cumulative exceedence distribution of the natural flow regime. The approach developed by SKM (2005) is referred to as the ‘range-standardised’ approach. It is acknowledged, however, that some non-hydrologic stresses in the same ecosystem, such as poor water quality, may result in ecosystems being more sensitive to changes in low flow than would otherwise have been the case under natural flow conditions. Figure 1: Illustration of difference in impact of a fixed reduction in average flows on two systems of differing variability (the average flows under natural and current conditions is the same for both cases, but the significance of the impacts is greater for biota adapted to a system of low variability). Source: SKM (2005) 1.2.4. Ability to meaningfully compare the indicator between catchments A comparison of flow stress at the regional scale is often required. Low-flow hydrology varies significantly across Australia and is largely characterised by the combination of hydrogeology and climate. Even in those areas that experience a similar climate, it is common to find streams that exhibit vastly different cease-to-flow properties. The variability of flows is considerably different across Australia. The same change in a low-flow indicator at two sites may not result in the same degree of ecological stress if the sites differ in the degree of variability observed in the flow regime (see Figure 1). The application of the ‘range-standardised’ approach allows comparison across regions with different flow regimes – all other stress-related factors being equal. 1.2.5. Ability to meaningfully compare the indicator over time Low-flow indices are sensitive to the length of streamflow record used in the calculations. SKM (2005) analysed this sensitivity by looking at the variation in the indicator values calculated using five, 10, 15, 20 and 25 years of data. The results generally show a marked reduction in standard error in all indices once the length of record reaches about 15 years. A similar analysis was undertaken by Kennard et al. (2009), which also found that 15 years of streamflow data was required to estimate flow indicators. However, the length of record required to calculate low-flow indicators associated with less frequent events has not been investigated. NATIONAL WATER COMMISSION — Low flows report series 6 1.3. Deriving time-series streamflow data The derivation of low-flow indicators is based on a time-series of streamflows. Typically the indicators are calculated to represent historical, natural or current flow conditions. The method used to derive these streamflows varies between sites that are: gauged versus ungauged regulated versus unregulated2. The general process to derive streamflows for each combination of these conditions is described in this section. The process to derive streamflows at a gauged and unregulated site is shown in Figure 2. The gauged streamflows represent the historical conditions (see Chapter 2). To derive a natural timeseries the historical impacts of anthropogenic activities (such as extractions) are added back to the gauged streamflows. To estimate a time-series of flows representing current conditions, the anthropogenic impacts at the current level of development (lod) are subtracted from the natural timeseries. Estimation of the reduction in streamflows caused by anthropogenic activities is discussed in Chapter 5. Cease-to-flow events (where there is no flow recorded at the gauging station) may be partially due to anthropogenic activities. In these cases the natural time-series should equal the anthropogenic effects. At other times there may be no water available and under natural conditions a cease-to-flow event would have occurred. It is difficult to distinguish between these two situations and assumptions must be made by practitioners. It should also be acknowledged that subsurface connectivity may remain after surface water has ceased to flow and may maintain recharge of refugia, and that these flows are not represented in the time-series of streamflows. Gauged Streamflow (Chapter 3) Historical Flows Add Historical Anthropogenic Effects (Chapter 6) Subtract Anthropogenic Effects at Current lod (Chapter 6) Natural Flows Current Flows Figure 2: Derivation of a flow time-series at a gauged and unregulated site The process to derive streamflows at an ungauged and unregulated site is shown in Figure 3. A method is required to estimate the natural flows in the catchment, such as the use of streamflow transposition or the application of a catchment model (see Chapter 3). The historical and current flows are then estimated by taking into account the anthropogenic effects. 2 In Queensland, regulated and unregulated water systems are referred to as supplemented and unsupplemented systems respectively. NATIONAL WATER COMMISSION — Low flows report series 7 Estimate of Natural Flow (Chapter 4) Subtract Anthropogenic Effects at Current lod (Chapter 6) Subtract Historical Anthropogenic Effects (Chapter 6) Historical Flows Natural Flows Current Flows Figure 3: Derivation of a flow time-series at an ungauged and unregulated site The process at a regulated site is a little more complex. Gauged streamflows will represent historical flows at sites with a gauge. However, at other ungauged sites a water resource system model is required to model the historical impacts. These models capture the effect of water supply infrastructure and operating rules (Chapter 4), and may also be used to predict flows under current and pre-development conditions. An equivalent natural flow model is required to derive natural flows in these systems. Estimate of Natural Flow (Chapter 4) Gauged Streamflow (Chapter 3) Water Resource System Model (Chapter 5) Run model with historical operating rules and demands (Chapter 5) Natural Flows Historical Flows Run model with current operating rules and demands (Chapter 5) Current Flows Figure 4: Derivation of a flow time-series at a regulated site The various components of estimating the time-series of flow are covered in more detail in chapters 2 to 5. A common theme throughout this report surrounds the difficulties involved in estimating a daily timeseries of flow. At an ungauged location the time-series is subject to a range of model uncertainties that include model calibration and extrapolation to an ungauged location (chapters 3 and 4). Even at a gauged location there is uncertainty in the streamflow measurements (Chapter 2). All sites are subject to the uncertainty in estimating anthropogenic influences (Chapter 5). All of the different sources of uncertainty will influence the accuracy of the low-flow indicators. Yet even though the accuracy of indicators depends on many site-specific factors (e.g. historical gauging or the nature of anthropogenic influences), some general guidance on their likely accuracy could benefit water managers. Several case studies could be undertaken to demonstrate the possible magnitude of these uncertainties. It should also be noted that in tropical systems a daily time-series may not be required to identify the persistence of refugia because predictable low flows occur for extended periods. The archiving of reference natural and current streamflows is currently poor. These datasets are typically prepared on a river-by-river basis at different times and by different people. While they are generally available, the effort required to obtain and understand the assumptions behind them is sometimes more difficult than it should be. This situation would be less challenging if sufficient detailed documentation about the model architecture, calibration process and scenario establishment were readily available. Where revisions to datasets have occurred, there is not always adequate version control, which creates duplication and the potential for use of superseded datasets. These NATIONAL WATER COMMISSION — Low flows report series 8 datasets are highly valuable and have various uses for multiple stakeholders. A repository of these datasets for key environmental flow sites, either centrally stored or distributed but maintained in a consistent manner by local agencies, could offer greater ease of access and certainty for users of these datasets. Resourcing of this data provision and storage will be essential if the same issues are not to arise in the future. When archiving these datasets, consistent notes should accompany them to indicate which anthropogenic influences have specifically been considered in the derivation of ‘natural’ flows, as well as a reference to readily available technical reports documenting the flow derivation. In addition to deriving low-flow indicators under natural (or reference) and current conditions, the likely changes to low-flow indicators under future scenarios (such as climate change) may be useful. However, the influence of longer-term climate regime variability (or change) on the low-flow indicators is not well understood. 1.4. Summary A list of hydrological indicators related to low flows has been compiled (Appendix A). Existing software packages (e.g. RAP) are available to calculate most of these indicators. However, the main challenge in deriving these indicators is the generation of a daily time-series of flow that may represent natural, current or historical conditions. The methods available to generate these time-series vary between sites that are gauged/ungauged and regulated/unregulated. The key gaps and limitations related to low-flow indicators are: the indices do not enable comparison between regions the uncertainty associated with low-flow indicators is not well understood. Other gaps and limitations identified in the review are as follows: most low-flow indicators can be calculated using existing software, with the exception of indicators related to antecedent and post low-flow event conditions there are difficulties in deriving daily time-series of flow to calculate the flow indicators in datapoor areas it is difficult to prioritise adoption of the 28 low-flow indicators estimation of a natural time-series of flow requires assumptions about the role of anthropogenic effects in cease-to-flow events the length of data required to calculate low-flow indicators associated with less frequent events is not known the influence of longer-term climate regime variability (or change) on the low-flow indicators is not well understood the likelihood of low-flow events under future scenarios is not well understood reference natural (and current) flows are poorly archived and are usually not readily available from state agencies for ongoing use. NATIONAL WATER COMMISSION — Low flows report series 9 2. Measuring and monitoring low flows 2.1. Introduction Where they are available, gauged streamflows provide a time-series of historical streamflows. In unregulated catchments gauged streamflows are also the basis for estimating a time-series of streamflow representative of natural and current conditions. The time-series of streamflows are used to generate the required low-flow indicators. In regulated catchments they form the basis for the calibration of river system models that are used to assess the impacts of management decisions on flow and usage regimes. The most common method of streamflow gauging across Australia is based on the measurement of stream level and conversion to streamflow using a rating curve (or stage discharge relationship). This method and key knowledge gaps are described in Section 2.2. There are few alternative techniques available – these are discussed in Sections 2.3 and 2.4. Finally, the current limitations and gaps in existing monitoring networks are discussed in Section 2.5. 2.2. Streamflow measurement using a rating curve At each streamflow gauging site the water level is measured frequently. The water level is then converted to a flow rate using the rating curve. Water levels below a defined threshold will indicate a cease-to-flow event. The rating curve is constructed based on a sample of streamflows measured using the velocity-area method and their corresponding water level (a concurrent streamflow and water level data sample is termed a ‘gauging’). The rating curve can be fit to the gaugings either using statistical techniques or can include some subjective judgement that may take into account the influence of the shape of the river cross-section and downstream obstructions. Details of these methods can be found in standard hydrology textbooks (such as Dingman 1994; Herschy 1985). The uncertainty associated with streamflow measurements depends on the measurement error associated with the water level and uncertainty in the rating curve, which in turn depends on the number of gaugings used to develop the rating curve and the variation between the individual gaugings. There is an Australian Standard that specifies a method to quantify the uncertainty associated with streamflow measurements (Standards Australia 1990). Several studies have applied this standard at sites across Australia. At the 71 sites analysed by Ozbey et al. (2008) in Gippsland (Victoria), the overall uncertainty in the 2005–06 annual flow was found to range between ±2 and ±24 per cent, with the majority between ±5 and ±15 per cent. The method was also used to assess 14 streamflow gauges within the Werribee River catchment (Victoria) and the uncertainty in the annual streamflows during 2005–06 ranged from ±4 to ±41 per cent of the reported flow (Lowe 2009). The uncertainty in streamflow measurements at low flows will vary between sites. The uncertainty in the water level measurement will vary between instrumentation. The number of historical gaugings made at low flows will influence the uncertainty in the rating curve at low flows. The nature of the cross-section of the stream is also influential. For a wide river without an incised channel, a small change in the water level will result in a large proportional change in the discharge at low flows. As such, uncertainty in water level measurements can result in a large uncertainty in discharge at low flows in percentage terms. Techniques are available to calculate the uncertainty in streamflow measurements at low flows and the necessary data can generally be obtained. However, these assessments are rarely undertaken and the general user is often unaware of the potential uncertainty associated with the streamflow measurements. For very low water levels it may be necessary to estimate the streamflow by extrapolating the rating curve beyond the range of gauged flows. At extremely low flows it can be difficult to obtain gaugings if the water depth is too low to allow a current meter or the velocity is too slow to spin the propeller of NATIONAL WATER COMMISSION — Low flows report series 10 the current meter (Scanlon 2007). Quality codes are assigned to each streamflow measurement and will identify measurements that are based on an extrapolation from the rating curve. A streamflow gauge may not be capable of measuring all of the flow at the site. For example, if the streamflow measurements are taken at a weir, the measurements may not include any water that bypasses the weir through a fish passage or is released as a passing flow. Additionally, streamflow gauges do not measure subsurface flows. It is important that periods where a stream ceases to flow are identified through monitoring. At many locations there is a control structure such as a v-notch weir or a natural rock bar that makes it easy to identify when there is a cease-to-flow event. However, there may be difficulties where there is a natural cross-section and its shape changes over time through geomorphological processes. The ability to monitor low flows varies according to the climate, access and geomorphology of river systems. In rivers with multiple flow paths, unstable cross-sections and poor access, it is difficult to monitor streamflows accurately. This is evident in the remote carbonate aquifers of tropical northern Australia, where features such as naturally forming tufa dams in carbonate aquifer catchments can lead to low flows appearing to increase throughout the dry season when this is actually not the case. The extent to which this issue has been resolved and the ability to address it with further investment in research or alternative monitoring technologies could be discussed with hydrographers from the Northern Territory Department of Natural Resources, Environment, the Arts and Sport (NRETAS) who have previously reported this issue. The quality of monitoring is also time- and event-dependent, as was evident in the post-bushfire periods in southern Australia, when the movement of ash and sediment significantly altered channel cross-sections. 2.3. Satellite remote sensing Monitoring low flows in remote or ungauged catchments presents a serious challenge to water resource management due to the limited amount of observed information on flow behaviour and patterns. Installing gauging stations in remote locations can be costly as well as problematic in terms of maintenance and servicing. Furthermore, stream gauge data represents behaviour at a single point, and therefore may not represent the total flow in certain circumstances, such as river braiding. Satellite remote sensing could potentially provide much of the information needed to make decisions on water resources. Stewardson et al. (2009) note several well-developed practical methods for using satellite remote sensing information to observe and characterise inundated areas as well as timedependent behaviour. A wide range of options are available that vary in cost, accuracy and applicability to the particular requirements of a project. Essentially, each method consists of the analysis and interpretation of multispectral satellite image data to establish the condition of a study area at a particular point in time. Often this requires some knowledge of the particular conditions on the ground, such as vegetation and soil type, which can affect how the satellite-based information is interpreted (Stewardson et al. 2009). Mapping areas of inundation during a particular flow or flood event can be analysed in conjunction with knowledge of the study area’s landscape and hydrology to estimate flows. The analysis of satellite remote sensing images over time can provide both short- and long-term information about inundation extents. This process will require calibration over a period of time to produce useful results. However, Stewardson et al. (2009) identified several challenges in estimating total inundated area, and therefore challenges in using satellite-based information in estimating flows: NATIONAL WATER COMMISSION — Low flows report series 11 There is generally a trade-off between temporal and spatial resolution. Stewardson et al. (2009) identified two satellites, Landsat TM5 and MODIS, which can capture medium-scale imagery useful for estimating inundated areas over Australia’s broad and remote semi-arid region3. MODIS is able to capture daily imagery, but it has a spatial resolution of 250 m. This resolution is likely to be poor at observing low-flow areas since the inundated areas may not be distinguishable at a pixel scale of 250 m. The imagery captured by Landsat TM5 has a pixel size of 30 m, which is a more appropriate scale for observing low flows and those at a river channel scale (Stewardson et al. 2009). However, the frequency of the Landsat TM5 passing is intervals of 16 days, which may be too coarse to observe some infrequent and brief events that may still be important in terms of estimating water resources. In addition, both satellite sensors using the visible range of the spectral data will be inhibited by cloud cover that may be associated with the rainfall and flow events. There is also a trade-off between spatial resolution and cost. MODIS imagery is available freely to download (although costs associated with the effort required to select and download relevant imagery should be factored in). There is a cost associated with acquiring Landsat TM5 imagery and therefore the number of images required needs to be balanced against the study area extent and budget available. The number of images required also influences the cost of analysis. Landsat TM5 imagery is available from the mid 1980s through to the present, with some gaps due to downtime of the satellite operation. In addition the satellite is well past its intended lifespan and its future operation is uncertain. Landsat TM imagery can also be used to identify waterbodies across the landscape. SKM (2006) used Landsat TM imagery to identify permanent wetlands in the Wimmera (Victoria). Several images, spanning 1992–2005, were compared to evaluate their permanency by monitoring wetland area changes over time. This data was fed into a geographic information system (GIS) where it was used to classify wetlands based on the presence of water following different meteorological conditions and at different times of year. In semi-arid and arid regions of Australia the presence and persistence of waterbodies can be inferred from the presence of vegetation. Satellite remote sensing can be used to detect the location of vegetation over time and may prove to be a more efficient way of monitoring the persistence of waterbodies. In using satellite remote sensing information to observe inundation levels, the specific requirements of observing low flows must be carefully considered. It will be necessary to determine which satellite data is at an appropriate temporal and spatial resolution to observe the river channels and inundated areas, as well as important changes in flow level over time. Coarser resolution data such as that of the MODIS satellite is available at daily intervals. Although larger pixel-size data is unlikely to be able to accurately represent inundated areas, by maintaining a continuous sequence of data and comparing this with ground observations, a relationship can be established between spectral behaviour and flow levels (Stewardson et al. 2009). The data-interpretation method must be considered to enable a meaningful result. It is imperative that sources of error are well understood before making this selection, such as the effects of cloud cover, turbidity and soil type (Stewardson et al. 2009). 3 There are a large number of satellites that capture imagery at a range of scales such as Spot, Quickbird and Worldview 2 which capture imagery 10 to 20 m, 1 to 5 m and < 1 m respectively. NATIONAL WATER COMMISSION — Low flows report series 12 Finally, any remote sensing application must be verified and ground-truthed. Significant effort in ground-truthing is required for understanding the uncertainty of the data compared with ground-based monitoring. This would allow the appropriate context to be placed on information when the resource manager or stakeholders are making decisions that depend on the different data. 2.4. Other techniques for streamflow measurement Streamflow measurement using a rating curve is the most common method, but other techniques are emerging that may provide better and more accurate representation of low flows. Alternative techniques may be particularly useful at sites that are influenced by backwater effects, weeds and sedimentation, unstable bed conditions or at which the discharge can vary considerably with only a small change in the water levels. Acoustic (or ultrasonic) meters are based on the measurement of sound signals. There are two main types of acoustic meters. The ultrasonic doppler meter measures the time taken for an acoustic signal sent into the water to bounce back. The ultrasonic transit time meter measures the time taken for an acoustic signal to travel between two transducers. These meters measure the velocity in the river at a particular depth. To measure the flow in a river, the meter either needs to be placed at a depth that represents the average velocity, or meters need to be placed at several depths (WMO 2008). Electromagnetic meters are another alternative. They pass an electrical current through the meter and the voltage measured is proportional to the velocity of the water (Australian National Committee on Irrigation and Drainage 2002). Currently these technologies do not provide better measurements at low flows than conventional methods. In some cases the water level measurement that corresponds to zero or low flows will provide useful information to assess ecological water requirements and estimation of the streamflow is not required. For example, monitoring of the water levels within off-stream waterbodies provides information on their persistence, but these measurements are not widely made. 2.5. Monitoring networks Each state and territory in Australia collects streamflow measurements from a network of sites (Ladson 2008). It is important that these networks are able to be used to measure low flows to achieve water plan objectives and to set and assess compliance against low-flow diversion rules. Streamflow gauging along a river combined with metering of any major off-takes should be established at a spatial and temporal scale commensurate with this ability. In the Murray Darling Basin this need has become especially important with the shepherding of water from upstream tributaries such as the Darling River to deliver ecological outcomes in the lower Murray River in South Australia. Streamflow gauging becomes even more important if diversions are not monitored during the event, so that river operators can assess the volume of any losses along the reach. Operators can then decide whether they fall outside of the range of anticipated losses and thus may be attributable to unauthorised take. Improving the spatial coverage and monitoring frequency of streamflow gauging and diversions will also help to define low-flow management rules for the environment to a similar level of certainty as those used for supplying consumptive users. This applies both to existing and new diversions. Seasonal monitoring of low flows and diversions would lend much support to recommendations on environmental flows. From an ecological measurement perspective, streamflow gauges (flow or level) would ideally be located at ecologically relevant locations, or at least at locations where the flow characteristics were representative of the relevant location. In practice, factors such as resourcing, access, cross sectional stability and the need for information to manage a water supply system have driven the decisions on the location of streamflow gauges. An inventory of important ecological locations that are not currently gauged could be assembled and the practicality and cost/benefit of monitoring at or near these sites NATIONAL WATER COMMISSION — Low flows report series 13 assessed. This information could inform future changes to gauging networks and encourage consideration of aquatic ecosystem management needs. Real-time information about low flows may be required for management purposes. For example, an environmental water manager may decide to release water from storage or place a ban on diverters once the flow in a river falls below a particular trigger. Real-time information is available at some locations and is used by water authorities across Australia. However, access to this information is limited and may not be available to all relevant stakeholders. Data from existing gauging networks is available via a few different sources, but most states have made data available on the internet (Ladson 2008). Not all of these sites currently provide access to quality codes or gauging history, which would be useful information for low-flow studies. The Australian Bureau of Meteorology also plays an important role in data provision and is working towards providing an integrated source of information (Australian Bureau of Meteorology 2010). 2.6. Summary A network of streamflow gauges across Australia provides useful information about low flows. The key gaps and limitations related to measuring and monitoring low flows are: users are unaware of the uncertainty in low-flow streamflow measurements the streamflows at many important ecological locations are not gauged real-time flow information is not widely available there are several well-developed practical methods for using satellite remote sensing information to observe and characterise inundated areas as well as time-dependent behaviour, but adequate on-ground observations are required to ground-truth interpretations the current spatial coverage and monitoring frequency of streamflow gauging and diversion metering may not adequately protect water flows to meet ecological needs and objectives, or inform the setting and compliance of low-flow management rules the water levels in off-stream waterbodies are important, but not commonly measured. Other gaps and limitations identified are: limited number of gaugings available during low-flow periods difficulty measuring very low flows using a current meter measurement of low flows at unstable cross-sections is difficult the channel is not always well defined and it can be difficult to determine the low-flow paths the benefits of other emerging streamflow measurement technologies in measuring low flows are not widely understood the measurement uncertainty associated with water levels will vary between different instrumentation there is flow through fish passages that is not recorded during gauging current monitoring techniques do not pick up subsurface flow monitoring needs to be able to identify cease-to-flow events. NATIONAL WATER COMMISSION — Low flows report series 14 3. Estimating low flows at ungauged sites 3.1. Introduction Low-flow indicators may be required at ungauged sites. For the purposes of this discussion ungauged sites may include those with no streamflow data, or those with some streamflow data that requires infilling or extrapolation before it can be used for its intended purpose. There are two main approaches to developing a time-series of flow at ungauged sites: streamflow transposition and catchment modelling (WMO 2008). A description of streamflow transposition is given in Section 3.2, followed by a review of rainfall-runoff models in Section 3.3. Given the uncertainties in estimating a time-series of daily flows, an appropriate alternative is to estimate the low-flow indicators directly from catchment characteristics (Section 3.4). All of these methods provide results that are notionally representative of natural conditions. To estimate flows representative of historical or current conditions, the influence of anthropogenic influences must be taken into account (Figure 3). The quantification of anthropogenic influences is discussed in Chapter 5. 3.2. Streamflow transposition The transposition method uses the streamflows recorded at a gauged catchment to estimate the streamflow at an ungauged site. The recorded streamflows are factored up or down using a transposition relationship. In applying this approach two steps are taken. Firstly, the most appropriate gauged catchment must be selected and secondly, a transposition relationship needs to be determined. The best results are obtained when the site selected for transposition is either directly upstream or downstream of the site of interest (WMO 2008). If such a site is not available, site selection should be based on the gauged catchment’s proximity and its hydrological similarity (WMO 2008). Lowe and Nathan (2006) developed a method for selecting appropriate sites across Victoria. As it is not possible to measure the hydrological similarity of ungauged catchments, the similarity of catchments with regard to characteristics influencing the hydrological regime (such as rainfall, soil permeability, stream frequency, forest cover) was used as a surrogate for hydrological similarity. The selection of these characteristics was based on an analysis of 165 gauged catchments in Victoria (Lowe & Nathan, 2006). The transposition relationship is used to factor the gauged streamflow to represent the ungauged catchment. If a short period of gauged data is available at the ungauged site, this should be used to calculate the transposition relationship. The transposition factor can be based on the relative catchment area, or may also take into account differences in rainfall (WMO 2008). Gan, McMahon and O’Neil (1991) based it on the catchment area, mean annual rainfall and the coefficient of variation of the annual rainfall. Other studies have based the transposition factor on the ratio of the recorded mean annual flow at the gauged catchment and an estimate of mean annual flow at the ungauged catchment (Lowe & Nathan 2006; WMO 2008). Spot flow measurements at the otherwise ungauged site may be used to verify transposition relationships using other parameters if the spot flow data is insufficient to develop such a relationship. As described above, the streamflows at the ungauged location are estimated by multiplying the streamflows in the gauged catchment by a transposition factor. Using this method, any cease-to-flow event (i.e. zero flow) observed at the gauged location will be assumed at the ungauged location. Therefore it is important that the gauged and ungauged sites have similar cease-to-flow characteristics. NATIONAL WATER COMMISSION — Low flows report series 15 The streamflow transposition methods described above can be tailored to low flows. For example, Voorwinde et al. (2003) allocated gauging stations to more than 1600 Victorian catchments for the purpose of monitoring low flows, while SKM (1999) investigated low-flow homogeneity in the Hawkesbury-Nepean Basin in New South Wales. However, the geologic units that control low-flow behaviour are much more difficult to characterise than the topographic and climatic drivers that control average and high flows. Factors that influence low flows – which are not as important for average or high flows – include the ‘distribution and infiltration characteristics of soils, the hydraulic characteristics and extent to the aquifers, the rate, frequency and amount of recharge’ (Smakhtin 2001). The quantification of these factors is an intrinsic difficulty when using streamflow transposition to estimate low flows. Even if the characteristics that determine low flows were understood, the adoption of these techniques may be hampered by limited access to information on catchment characteristics. A national coverage of catchment characteristics may become available from the Australian Bureau of Meteorology, which would resolve this issue. Another impediment is the time and effort required to develop procedures to select catchments that have similar low-flow behaviour and transposition factors appropriate for low flows. 3.3. Catchment modelling In a rainfall-runoff model a time-series of rainfall and evaporation is used to estimate streamflows. To apply a rainfall-runoff model in an ungauged catchment, the following steps are undertaken: 1. A rainfall-runoff model is selected 2. Model parameters are determined for a selection of gauged catchments via calibration 3. Model parameters are applied to the ungauged catchment with or without adjustment The conceptual rainfall-runoff model is used to predict streamflows with the transposed model parameters and climate data. Hydrologists have focused their attention on refining and improving this approach for several decades. A brief summary of these steps and the remaining gaps in knowledge are provided below. 3.3.1. Model selection Many different rainfall-runoff models have been developed over the years. Some of the more commonly used models have been compiled into the online Rainfall Runoff Library (RRL), http://www.toolkit.net.au/Tools/RRL, which is maintained by the eWater CRC, although the number of models used by industry and academia extends beyond this list and other models are used outside of Australia. Rainfall-runoff models vary in their structure and the number of parameters included in the model. The low-flow behaviour of these models is commonly controlled by simplistic conceptual ‘buckets’ that are poorly suited to modelling low-flow behaviour at the daily time-step. Low flows, particularly over extended dry periods, arise from multiple subsurface units that become depleted at different stages. More complex models are better able to model low flows, however the difficulty in calibration is increased, as is transposition of the model parameters to ungauged catchments (as discussed in the next section). Some of these rainfall-runoff models provide a better representation of low flows. For example, there are two versions of the AWBM rainfall-runoff model. One version is better suited to estimating low flows and the other high flows and floods (Boughton 2004). The processes governing runoff also vary and are different in dry, arid regions (Wei et al. 1998). Estimation of streamflows in these regions is difficult (Ladson 2008). The IHACRES model is considered to be one appropriate for use in ephemeral catchments (Ladson 2008). Costelloe et al. (2005) found that a lumped conceptual rainfall-runoff model did not adequately represent large arid NATIONAL WATER COMMISSION — Low flows report series 16 catchments due to the heterogeneity in characteristics across the catchment. Improved results were obtained using a semi-distributed grid-based conceptual model. Specialised models are required to adequately model low flows in some specific environments. In alpine areas, for example, snowmelt affects low-flow behaviour and hence rainfall-runoff models should ideally have a snowmelt module when being applied there. Snowmelt algorithms for use in rainfall-runoff models are widely available in both Europe and North America. Similarly in catchments with mixed geology, the ability to accurately model low flows with many rainfall-runoff models can be poor. The availability of only a single groundwater discharge parameter in SIMHYD was noted as a potential limitation in modelling carbonate aquifer catchments in northern Australia, for example, where groundwater discharge can operate at two speeds – depending on the storage content of carbonate and non-carbonate aquifers during the dry season (SKM 2007). Combined hydrologic and hydrogeologic models have been developed and applied in isolated cases in recent years. These models present the opportunity to better model surface water/groundwater interaction processes at low flows, but are currently highly parameterised and are not supported by adequate input data. Input data requirements can be significantly greater for these models than traditional rainfall-runoff models. Computing speed and storage has traditionally also been a problem with these models, but this has improved markedly in recent times. A few studies have investigated the relative performance of models in estimating low flows and in ephemeral catchments (Ye et al. 1997). While there appears to be an understanding of the relative strengths and weakness of the common rainfall-runoff models among experienced hydrologists, the provision of clear guidance in the RRL would go a long way to fostering a wider appreciation. 3.3.2. Model calibration During model calibration the parameter values are selected to find the best fit between the estimated and observed streamflows. Objective functions measure model performance and can be used to select model parameters. The following objective functions are commonly used for a calibration that focuses on fitting to low flows (Ladson 2008): sum of square roots sum of squares of differences of square roots sum of squares of differences of values raised to the power of 0.2 sum of absolute differences of logs. These objective functions are included in available rainfall-runoff packages (such as those in the RRL) and are easily adopted. While these objective functions are commonly used, there has been no formal testing of their adequacy. Calibration also relies on the skill of the modeller to specifically match the proportion of time with cease-to-flow, the flow duration curve and baseflow recession curve. Automated procedures for calibration that use objective functions have significantly reduced processing times for calibration, but at present are generally unable to achieve the same level of accuracy as manual calibrations. As with any model, the reliability of the results will depend on the length of data available for calibration and how well the calibration data represents the conditions that the model is being used to predict. A model calibrated over a period of low flows will provide a better estimate of low flows than a model calibrated over a period of high flows. The transparency of the model calibration approach and how the results are reported can vary. The shift in climate in south-eastern and south-western Australia during the past 10 to 30 years has created some uncertainties in the accuracy of previously calibrated rainfall-runoff models. Models that NATIONAL WATER COMMISSION — Low flows report series 17 were calibrated to data collected before the climate shift often over-estimate low flows in more recent periods. This is possibly due to a shift in the relationship between rainfall and runoff as a result of changes in soil moisture and plant uptake and use of water. The inter-annual rainfall conditions that affect soil moisture and groundwater stores are outside of the historical conditions of the calibration period. A review of the calibration period of rainfall-runoff models across southern Australia and a recalibration of those models to more recent data should be undertaken where this has not already occurred. Understanding the relationship between evapotranspiration and temperature, which is still being debated in Australia, will have important implications for both the parameterisation and calibration of rainfall-runoff models under climate change conditions. 3.3.3. Transposition of model parameters If a period of gauged streamflow record is available at the site, the model parameters are derived thorough calibration of the model to the available data. In locations where no streamflow record exists, the model parameters need to be transposed from a gauged catchment. Several approaches have been trialled and used to transpose model parameters from a gauged to an ungauged catchment. These include adopting model parameters from nearby gauged catchments (e.g. Merz & Bloschl 2004; Post et al. 2007) or developing prediction equations that link individual model parameters to physical catchment characteristics (McIntyre et al. 2005; Seibert 1999; Wagener & Wheater 2006). Rather than estimate model parameters individually, more recently attempts have been made to transfer entire sets of model parameters based on the similarity of the gauged and ungauged catchments (e.g. Bardossy 2007; McIntyre et al. 2005; Reichl et al. 2006, 2007). Several attempts have been made to reduce the influence of parameter uncertainty on the prediction of runoff. Simple rainfall-runoff models have been developed with few parameters to eliminate any inter-dependencies (e.g. Jayasuriya et al. 1991, 1994). Attempts at parameter regression using these models have reported improvements (e.g. Boughton 1984; Jayasuriya et al. 1994; Nathan et al. 1996; Parajka et al. 2007). The approach developed by Nathan et al. (1996) was used to estimate flows across Victoria as an input to determining bulk water entitlements and provides a practical example of model parameter transposition. Despite the considerable effort devoted to this area, there are still substantial uncertainties associated with ungauged runoff estimated using rainfall-runoff models (Sivapalan 2003). The difficulties in predicting runoff in ungauged basins has been attributed to the uncertainty in the calibrated model predictions (Bardossy 2007; Reichl et al. 2007), the heterogeneity of runoff processes and catchment characteristics (Sivapalan 2003), the use of non-representative physical catchment characteristics (Parajka et al. 2007), uncertainty in the catchment characteristics, and uncertainty in the input data and model structure (Reichl et al. 2007). 3.4. Direct estimation of low-flow indicators Given the uncertainties associated with estimating a time-series of natural daily flows at an ungauged location, it may be more appropriate to directly estimate the low-flow indicators in these catchments based on catchment characteristics such as climate, hydrogeology, soils, topography and land use. This approach could be applied across Australia and applied to a range of low-flow indicators. The Low flow manual (WMO 2008) provides a comprehensive description of the methodology and examples of its application. Direct estimation of low-flow indicators was most recently undertaken for the Northern Australia Sustainable Yields (NASY) project and has also been undertaken for southeastern and south-western Australia. Direct estimation of low-flow indicators is helped by knowledge of cease-to-flow conditions in any given river. This can be informed by spot measurements during extreme droughts or in some cases by anecdotal evidence from water utility operators and river managers. Having access to this information would also be useful to indicate likely refuges for ecosystems during low-flow periods and NATIONAL WATER COMMISSION — Low flows report series 18 could be coupled with remote sensing information to indicate the presence or absence of permanent pools during extreme droughts. The 2006–07 drought in south-eastern Australia event could be analysed. 3.5. Comparison of techniques A comparison by CSIRO and SKM of direct estimation of low-flow indicators through regional regression versus estimation by transposition of rainfall-runoff models by nearest neighbour, indicated that while both methods were similarly accurate for medium to high flows, direct estimation performed better for low flow indicators. The disadvantage of this approach is that it does not provide a timeseries of data, but can be useful to condition rainfall-runoff modelling results, as demonstrated in the NASY project. Direct transposition of streamflow data and rainfall-runoff models both suffer from problems associated with the spatial representation of rainfall. Any research into better spatial representation of time-series rainfall data, such as the use of radar or other technologies, will serve to improve rainfallrunoff modelling, including in low-flow periods (e.g. low-flow fresh events). Direct transposition also suffers from potential differences in baseflow recession behaviour. For short periods of missing data, alternative techniques for infilling data may be warranted, but at present there are no readily available tools to help with this. For example, in a period of no rainfall, using an exponential baseflow recession curve from the last gauged reading to the next available one will perform significantly better than either transposition or rainfall-runoff modelling. The techniques presented are not useful for modelling in-stream storage behaviour after flows have ceased. For example, a rainfall-runoff model does not identify low-flow refuges and is not suitable for modelling the persistence of a waterhole. In these instances other types of models are required. 3.6. Summary Two methods to estimate a time-series of natural flow at an ungauged location are presented above. Both approaches rely on a series of assumptions, including the selection of a representative gauged catchment. Given the uncertainties associated with these methods, it may be more appropriate to estimate the low-flow indicators directly from catchment characteristics. The key gaps and limitations related to estimating flows at ungauged locations are: the relative ability of commonly available rainfall-runoff models to represent low flows is not widely understood no study has been conducted to determine which objective functions should be used to calibrate to low flows. Other gaps and limitations identified in the review are as follows: the catchment characteristics that control low-flow behaviour are difficult to identify and characterise a method to rapidly determine the hydrological similarity of catchments with respect to low flows is not available transposition methods tend to be based on transposition factors related to the average flow the shift in climate in south-eastern and south-western Australia during the past 10 to 30 years has created some uncertainties in the accuracy of previously calibrated rainfall-runoff models NATIONAL WATER COMMISSION — Low flows report series 19 the selection of catchment model parameters for ungauged catchments introduces uncertainty a substantial amount of effort is required to adequately estimate a time-series of daily streamflows at an ungauged site the location of perennial stream reaches and low-flow refuges for in-stream biota are not always known rainfall-runoff models are not useful for modelling processes at a small scale (e.g. waterhole). NATIONAL WATER COMMISSION — Low flows report series 20 4. Estimating low flows in regulated systems 4.1. Introduction The method adopted to estimate low flows in a regulated water supply system can vary between flows required to represent historical, current and natural scenarios (Figure 4). Due to the need to capture the complex management arrangements that exist in regulated systems, a hydrologic river system model is often required to represent flows under pre- and current development. A comprehensive review of the limitations of water resource system models (or river modelling) was undertaken for the Murray-Darling Basin by Van Dijk et al. (2008). The limitations and gaps in estimating low flows using water resource system models within this chapter draws heavily on this previous review. 4.2. Water resource system models Water resource system models are used to simulate the storage and movement of water within a regulated water supply system. These models represent rivers, reservoirs, major diversions and access rules. Typically the models are used to facilitate water resource planning, both short and long term. The most commonly used models are listed in Table 1. Table 1: Water resource system models Model Predominant area of use IQQM New South Wales and Queensland REALM Victoria and Western Australia WATHNET Sydney and South East Queensland Water Grid MSM-BIGMOD Murray River WaterCress South Australia SGNT13 Queensland (St George system within the Condamine-Balonne region) SnowyHydro New South Wales (Snowy Hydro) Hydstra Tasmania River Manager Trial applications being undertaken throughout Australia The degree of regulation and effect on low flows can vary considerably across a region. The spatial and temporal resolution of the river system model and its ability to replicate day-to-day river operational practices will affect its ability to model low flows at a site of interest. The level of spatial representation included in the models varies and some interpolation may be required if the site of interest is not represented within the model. River system models are typically only representative of the locations that they are calibrated against. The temporal resolution is also important. IQQM operates on a daily time-step, while the time-step used within REALM can be daily, weekly or monthly. The low-flow indicators are based on a daily time-step. If a weekly or monthly REALM model is used, data manipulation and interpolation is required to generate low-flow indicators for the scenarios modelled. During the past decade more REALM models have been developed with (or converted to) a daily time-step, but there are some notable exceptions. For example, the Goulburn Simulation Model used to represent Northern Victoria is at a monthly time-step. A major difference between IQQM and REALM is the ability to route flows through the model, although modellers are using methods to incorporate routing into a REALM model (Department of Sustainability and Environment 2009). NATIONAL WATER COMMISSION — Low flows report series 21 Van Dijk et al. (2008) undertook a comprehensive review of the uncertainty in river modelling across the Murray-Darling Basin and found that models provided a very poor representation of low flows. The poor performance is likely to be attributable to the difficulties in representing losses within the system and the lack of data on diversions. Adequate representation of system operation, surface water/groundwater interactions and uncertainty in model inputs also play a role. The ability to adequately model low flows will also be influenced by other factors such as the model calibration and representation of water trading. River losses can be large, particularly in the large low-lying rivers. During low flows these losses may be attributable to direct evaporation, seepage, groundwater recharge, bed losses and losses to the banks of the stream (Smakhtin 2001). The relative contribution of each of these is poorly understood (Smakhtin 2001) and overall losses are determined by undertaking a reach balance, with loss volume equal to the inflows less the outflows if all other inflows and outflows are ‘known’. The accuracy of the estimate will depend on the uncertainties associated with all of the inflows and outflows used in the calculations (see Section 2.2). Lowe et al. (2009) investigated the magnitude of the river losses along the Campaspe River, Victoria. The uncertainty was found to range between ±13 to ±1263 per cent of the best estimate of the river losses for each month analysed and was mostly due to the uncertainty in the streamflow measurements. The influence of the uncertainties in the inflows and outflows will decrease as the length of the reach considered increases (Dingman 1994). However, as the length of the reach increases, so does the influence of attenuation and this can cause difficulties in estimating losses, particularly during periods of low flows. The historical magnitude of river losses may be estimated using an inflow-outflow analysis, as described in the preceding paragraph. Typically these losses are represented in the model as either a constant value or as a function of the flow in the river. As well as not capturing the likely temporal variation of losses, the relationship between river flow and the magnitude of losses may be weak (as found by Lowe et al. (2009)) or may vary depending on antecedent conditions. The representation of losses within the model may also be altered during the model calibration process. During calibration the focus is usually on achieving the best prediction of overall system yields and may be poorly suited to simulating low-flow conditions. In these situations the losses are not likely to represent true losses but rather a combination of factors including errors in other model inputs (Van Dijk et al. 2008). The flow in a regulated river will in most cases depend on the magnitude and timing of diversions. Assumptions are required to model diversions when there is a lack of data. Van Dijk et al. (2008) conclude that this can lead to a poor representation of low flows. A more detailed discussion regarding diversions is provided in Section 5.2. Groundwater extractions can also have a substantial impact on low flows, particularly along reaches where there is high connectivity. The influence of these extractions is not always represented within models, but the integration of these models was undertaken as part of the Murray-Darling Basin Sustainable Yields project. The water resource supply models represent the operation of water supply systems. The rules included in the model may not adequately represent actual operation during periods of low flows if the rules included in the model are a simplification of the actual operation, if the operating rules have changed over time or if there have been times when the system has not operated according to the set rules. As an example, river operators decide to release water from regulated storages to meet demands by considering a number of factors. These include the expected transmission losses, useful downstream tributary contributions, and alterations to orders as a result of short-term weather fluctuations. All of these factors require the operator to make forecasts in relation to future conditions. The quality of the forecast dictates whether too much, just enough or too little water is released from the storage to meet demands. Representation of these forecast practices in river system models is either non-existent (in the case of losses and demand reduction) or crude (in the case of tributary utilisation). As a consequence the ability of the river system model to reproduce the daily pattern of dam releases and downstream low flows is severely compromised. NATIONAL WATER COMMISSION — Low flows report series 22 Low-flow regimes are often heavily influenced by the operation of in-stream weirs. The operation of these and the effects on flows are generally poorly represented in hydrology river system models. As an example, a large number of in-stream weirs were removed from the New South Wales river system models due to model instabilities. Hydraulic models offer a better representation of the influence of these in-stream weirs. Model calibration will also affect the quality of low-flow estimates. The emphasis placed on matching low flows during calibration will vary depending on the model’s main purpose. For example, the calibration of models used for environmental flow studies will focus on low flows, while a model used for long-term water resource planning may not place a high weighting on matching daily low-flow events but be more interested in capturing overall flow variability through flow duration curve matching. This was identified as an issue in the Warrego by CSIRO (2007). The importance of flows to refuge pools was identified as important by CSIRO (2007), however it was not possible to model low ‘refreshing’ flows to the pools because the models were not adequately calibrated for this part of the flow regime. The model’s ability to represent low flows will also depend on the period used for calibration; that is, a model calibration over a period of low flows may provide a better representation than a model calibration during a relatively wet period. A model can be calibrated at a number of locations. The calibration of a model for long-term water resource planning will focus on matching reservoir storage volumes and the flow at large offtake points in the system and this may come at the expense of matching downstream flows. For consistency, there is generally only one recognised water resource model for use by government agencies within a particular river basin, so decisions about improving calibration accuracy at one part of the flow regime (or location in the system) at the expense of another will usually involve some trade-offs in relation to the model applications. A review of the ability of these models to represent low flows at ecologically important locations would help managers and planners determine if the model results are suitable for their needs. In addition to the difficulty in reproducing observed low flows, water resource system models may not represent cease-to-flow events well. In recognition of this, flows below a nominated threshold are often considered to be equivalent to a cease-to-flow. For example, in Queensland all flows modelled by IQQM to be less than 2 ML/day are assumed to be a cease-to-flow event. With monthly models, such as the northern Victorian REALM models, the ability to identify within-month cease-to-flow events is poor. Despite the representation of perfect trade at lumped nodes in river system models, a very large proportion of water trading activity is not dynamically incorporated. This is especially the case when undertaking alternative climate scenarios such as under climate change. Although the magnitude of diversions under climate change is usually adjusted for the change in climate, the location of the diversions is not adjusted. Some research into coupled hydrologic-economic models has been undertaken for use in water trading scenarios – using REALM for example (Weinmann et al. 2005) – however this has not resulted in water trading algorithms being adopted into water resource modelling more generally. Improved understanding of likely water market behaviour during low-flow periods and incorporation of this knowledge into water resource modelling would be beneficial for alternative climate and water management scenarios. Access to the water resource system models is not always available and some stakeholders rely on model outputs that are made public. The limitations of the models in estimating low flows are most commonly reported in technical documents that are not made public and require a technical background to understand. 4.3. Summary Water resource system models are used to estimate flows within a regulated system. Van Dijk et al. (2008) found these models provided a poor representation of the timing of low flows and this was most likely due to the poor representation of river losses, daily diversions, and operational practices NATIONAL WATER COMMISSION — Low flows report series 23 within these models. These models should be used with caution when developing water plans that focus on low-flow ecological responses. The key issues and gaps related to modelling flows within a regulated system are: there are large uncertainties associated with estimates of river losses river losses may be represented poorly within a model. Other gaps and limitations identified in the review are as follows: the degree of regulation and effect on low flows can vary considerably across a region not all models are represented on a daily time-step models may not represent the daily operation of a water supply system models may not represent cease-to-flow events well models do not include dynamic representation of water trading models may not be calibrated to represent low flows and the limitations may not be communicated to all relevant stakeholders. NATIONAL WATER COMMISSION — Low flows report series 24 5. Quantifying anthropogenic influences 5.1. Introduction The difference between historical, current and natural flow series is the effect of anthropogenic influences on the flow regime. In essence, any change in a flow indicator between these scenarios is simply a measure of the impact of anthropogenic influences on the low-flow regime. As such, the quantification of anthropogenic influences is critical. Anthropogenic influences include the direct extraction of water from waterways (Section 5.2), the water harvested by farm dams (Section 5.3) the reductions in low flows that result from groundwater extractions (Section 5.4) and changes in land use (Section 5.5). Low flows can also be increased by discharges into a waterway (Section 5.6). This chapter presents a brief review of each of these influences. Other influences not addressed in this section include the artificial drainage of valleys, the influence of floodplain structures and small weirs, the influence of irrigation return flows and interbasin transfer schemes. 5.2. Direct extractions Water extracted directly from waterways or waterholes is used for a variety of purposes across Australia and the nature of the licences used to manage these extractions varies between the different uses and across jurisdictions. These extractions will impact on low flows, particularly as the demand for water tends to be greater during dry periods. Some direct extractions are metered. Metered diversions are subject to metering error, but this uncertainty is often minimal compared with the uncertainty introduced by disaggregating metered volumes to a daily time-step. Meters tend to be read on an opportunistic, quarterly or seasonal basis. Therefore the estimation of extractions on a daily or monthly time-step requires disaggregation and reliance on a number of assumptions. The daily pattern of extractions for irrigation may be based on estimates of irrigation demands – derived based on irrigation orders in a regulated system or using programs such as PRIDE developed by Erlanger, Poulton and Weinmann (1992) or the United Nations FAO56-based models that use the methods documented in Allen et.al. (1998) – or based on the pattern of net evaporation. However, some irrigators will extract water when it is available and store it in an off-stream dam. Extractions for domestic and stock purposes are more likely to occur uniformly across the year, but there is little evidence on which to base this assumption. Even where diversions are metered, the data is generally collected by a water utility and is not readily available to external parties. In the future this information may be collected and made available by the Bureau of Meteorology. Other diversions are not metered and the magnitude and timing of the extractions must be estimated. The estimated diversions may be based on a licensed volume or modelled using information on the intended use and climate information (e.g. PRIDE). In these cases there are substantial uncertainties associated with the magnitude and timing of diversions. Estimates of irrigation water use on a daily time-step are poor. Many of the decisions are based on poor interpretation and representation of the behaviour of irrigators in the river system models. Trials of the use of smart meters on private diversions have occurred in a number of places around Australia, including the Yarra Valley in Victoria. The preliminary outcomes of these trials highlight that a wealth of information can be obtained, particularly in relation to the management of private diversions at low flows and the relative adherence to restriction policies by private diverters. The use of these meters in other regions could play a critical role in real-time management of water, especially in managing for low-flow ecological responses in unregulated systems. While the benefits of using smart meters are clear from these trials, a business case for the use of smart meters on private NATIONAL WATER COMMISSION — Low flows report series 25 diversions has not been prepared and further investment is required to identify when and where smart meters are economically advantageous to install and use. Further uncertainty is introduced when estimates are required of the historical extent of extractions, particularly when information is not available on the historical number of licences. 5.3. Farm dams In some regions of Australia farm dams extract a substantial proportion of the available resources. Farm dams may have a substantial impact on low flows. Until it is full, a farm dam will capture all the catchment runoff intercepted by it. Farm dams intercept the first catchment flows after summer, thereby extending the period of time over which the waterway could be experiencing dry conditions. The impact of farm dams on streamflows are not measured but generally estimated using the simulations model, Tool for Estimating Dam Impacts (TEDI). TEDI undertakes a water balance for each farm dam in the catchment and calculates their cumulative impact on streamflows (Nathan et al. 2000). Inputs to the model include the number and volume of farm dams, data to estimate the net inflows to each dam and a demand factor. The demand factor is the average volume of water extracted from the dam, presented as a proportion of the total dam capacity. The TEDI model has been used to estimate farm dam impacts across many regions of Australia. The TEDI model operates on a monthly time-step. The next version of TEDI (called STEDI) will enable farm dam impacts to be modelled on a daily time-step. However, the daily estimates will only be as reliable as the model inputs. There are substantial uncertainties associated with some of the TEDI model inputs and a framework to assess these uncertainties was developed by Lowe and Nathan (2008). The uncertainties associated with farm dam impacts were assessed for the Werribee Basin, Victoria, on a monthly time-step. Results showed that the volume of farm dams varied by ±11 per cent and the impact on streamflows varied by ±29 per cent. The Murray-Darling Basin Authority is funding a study to improve some of the inputs to TEDI, however the uncertainties associated with daily impacts are likely to remain substantial. One of the challenges in estimating the impact of farm dams is simply identifying the number of farm dams across a catchment. Typically farm dams are identified from aerial photography. To obtain an estimate of historical farm dam impacts the historical number of farm dams present in the catchment can be determined by looking at old aerial photography. However, this can be an expensive exercise and is rarely undertaken. 5.4. Groundwater extractions Groundwater extractions can reduce the amount of groundwater discharge into waterways. In particular, groundwater extractions affect low flows because they reduce the baseflow contribution. There are a range of issues associated with monitoring and modelling of groundwater extractions, including identifying the location of groundwater extractions, obtaining information on the use of the water and modelling user behaviour. The impact of groundwater extractions can be estimated using groundwater models (see Section 6.3). 5.5. Land use change The land use in a catchment influences the streamflows and a change in land use can alter the lowflow regime. Pusey et al. (2009) reviewed the changes in land use since European colonisation due to changes in vegetation type, grazing and fire regime. There are many examples presented in the literature that show that changes to the vegetation type, afforestation, deforestation and catchment NATIONAL WATER COMMISSION — Low flows report series 26 urbanisation alter low-flow characteristics (Smakhtin 2001). These changes will influence the low-flow regimes of most Australian waterways. Pusey et al. (2009) conclude that due to the influence of land use changes, gauged streamflows do not represent a natural flow regime. In previous studies (e.g. SKM 2005), the influence of land use changes has not been taken into account in deriving a time-series of ‘natural’ flows. For this reason, the natural flow regime is sometimes referred to as the ‘unimpacted’ or ‘pre-development’ condition as it represents the streamflow that would occur if all anthropogenic extractions and diversions ceased, under current (or possibly historic) conditions of land use cover. However, recent years have seen investment in better understanding the changes in streamflows due to changes in land use. Peel (2009) notes that the number of journal articles in this area has increased dramatically since 2000 and provides an overview of recent developments in this field. The basis of much modelling in this area is based on the work of Zhang et al. (2001) who looked at the response of mean annual evapotranspiration to vegetation changes at a catchment scale. The eWater CRC toolkit provides several tools to help hydrologists and water managers quantify these changes. For example, one of the features of WaterCAST (a whole of catchment model) is the ability to model different land use types (Cook et al. 2009). The different characteristics of each land use type are included in the model by specifying different rainfall-runoff model parameters for each land use type (Chiew 2003). Another eWater model, the Forest Cover Flow Change tool (FCFC), can be used to quantify the impact of large changes in forest cover on daily streamflows. The reliability of these models on a daily time-step requires warrants further investigation. 5.6. Wastewater treatment plant discharges Wastewater treatment plants and other similar discharges can influence low flows. In dry periods, these discharges can sometimes be the only source of water in a stream and can turn an ephemeral stream into a perennial one. The location of these treatment plant discharges is not currently mapped in any readily available format across Australia, with the information currently being held within individual water utilities. Having access to a nationwide map of these discharge locations, together with the agency responsible for managing those discharges, would support low-flow investigations. Other similar discharges include return flows from irrigation, coal seam gas discharges, mine water and other industrial discharges. 5.7. Summary The estimation of anthropogenic influence on streamflow involves the careful treatment of many sparse datasets related to system operation, extractions for urban and rural demands, farm dams, groundwater extractions and land use changes. The time-step for which these datasets are available varies and can be limited to a monthly or seasonal time-step. Hence, our ability to quantify the various factors that modify flow behaviour decreases as the time-step of interest decreases. Thus, while we might be able to derive streamflows representative of natural and current conditions at an annual level with some degree of confidence, the potential for errors when attempting to characterise differences in low flows is considerable. Indeed the nature of the available data is such that it could be argued that the derivation of a daily time-series simply reflects the nature of the methods and assumptions used in its derivation. The shortest time-step that is commensurate with the level of information and estimation techniques available in Australia is at best monthly. Given the difficulties in estimating anthropogenic influences at a daily time-step, two possible approaches could be adopted to assess the impact on low flows: derive low-flow indicators at a monthly time-step in data-poor regions, or NATIONAL WATER COMMISSION — Low flows report series 27 develop simple models to estimate the change in a low-flow indicator due to various levels of anthropogenic influences. The key issues and gaps related to modelling anthropogenic influences are: smart meters are not widely used estimates of irrigation water use on a daily time-step are poor – many of the decisions are based on poor interpretation and representation of the behaviour of irrigators in the river system models. Other gaps and limitations identified in the review are as follows: difficulty in estimating all anthropogenic influences at a daily time-step the volume of pumping from waterholes is not well known the monitoring and modelling of groundwater extractions can be improved the seasonal impact of land use change on streamflows is not very well understood readily available information on low-flow discharge locations from sources such as wastewater, return flows from irrigation and coal seam gas floodplain structures and small weirs located on a waterway can affect low flows. NATIONAL WATER COMMISSION — Low flows report series 28 6. Mechanisms generating low flows 6.1. Introduction It is important to understand the mechanisms that generate low flows. The prediction of low flows under different scenarios (e.g. climate change) will be improved if the processes that produce low flows are better understood. Also water managers will be able to more efficiently address issues of stress during low-flow periods if the drivers of low-flow events are known. For example, the benefit of installing a low-flow bypass on farm dams can be assessed if the contribution of surface runoff during low-flow periods is understood. While this report does not specifically address water quality issues, an improved understanding of the mechanisms that generate low flows will help managers better understand issues such as the impact of reduced low flows on the salinity dynamics in permanent pools. For example, the relative contribution of surface runoff and groundwater inflows to a waterway will influence the water quality, and surface runoff may play an important role in maintaining lower salinity levels. 6.2. Identifying and monitoring sources of low flow There are essentially four sources of low flows (Smakhtin 2001): 1. Groundwater – discharge from groundwater storage 2. Unsaturated zone flow – also known as throughflow 3. Bank storage – during high-flow events water seeps into the river banks and discharges back into the river once the flow event has receded. This source of low flows is important in broad alluvial flood plains 4. Delayed surface water – seepage from large waterbodies (e.g. lakes and reservoirs) In addition, direct rainfall and localised runoff may play an important role in the persistence of waterholes. It is possible that more than one driver will influence a particular low-flow event. Worldwide there has been little investigation into the mechanisms that generate low flows. The contribution of groundwater discharge to low flows can be monitored by analysing the hydrochemistry of the groundwater and low flows, for example chloride and radon concentrations are higher in groundwater and will decay rapidly once discharged into a waterway. Another monitoring approach is to take streamflow gauging at intervals along a river reach. Increases in the streamflow along reaches that do not receive tributary inflows are typically attributed to groundwater discharge. Both of these approaches are resource intensive and only a few streams across Australia have been assessed. Most studies in Australia have focused on reaches with groundwater discharges and little work has been done to monitor surface water/groundwater interactions in losing streams. 6.3. Modelling Groundwater modelling can be undertaken at different levels of complexity. Analytical modelling adopts standard equations and relies on simplifying assumptions to model groundwater systems. Numerical models (such as MODFLOW) are more complex, but require more data for calibration and validation. A more detailed description of groundwater models can be found in standard groundwater text books or in Rassam and Werner (2008). NATIONAL WATER COMMISSION — Low flows report series 29 The focus of recent research has been on linking groundwater and surface water models (Rassam & Werner, 2008) and this should improve the ability of models to estimate low flows. eWater is currently preparing protocols for linking river and groundwater models. Streams and rivers across the Murray-Darling Basin have been categorised as either gaining or losing streams. This categorisation was based on a comparison of groundwater levels and stream levels. This provides useful information for a variety of purposes and may be used to improve the calibration of river models. This study could be extended beyond the Murray-Darling Basin, but the extent will depend on the number and location of groundwater bores and streamflow gauges. Difficulties arise when generalising the mechanisms that generate low flows because these relate strongly to local and regional conditions and are highly dependent on the scale used to manage the resource. For example, the models used to understand the mechanisms providing flow into a small pool are likely to differ to a study covering a larger system or the entire Murray-Darling Basin. 6.4. Summary Issues and gaps related to understanding the mechanisms generating low flows are: worldwide there has been little investigation into the mechanisms that generate low flows or the synergistic interactions among them few studies have monitored surface water/groundwater interactions in losing streams the location of gaining and losing river reaches is not widely mapped outside of the MurrayDarling Basin. NATIONAL WATER COMMISSION — Low flows report series 30 7. Hydraulic characteristics 7.1. Introduction Previous chapters have focused on hydrologic or flow related limitations and gaps. However, from an ecological perspective it is important to consider the hydraulic characteristics of the stream in conjunction with its hydrologic characteristics. The hydraulic characteristics of a waterway at low flows determine the amount of habitat and degree of connectivity, and during extended low flows the hydraulic characteristics determine the location and longevity of refuges. 7.2. Hydraulic modelling At a streamflow gauging site the relationship between the flow in the river and the depth of water is relatively well understood (see Section 2.2). The challenge lies in understanding the relationship between the flow recorded at a streamflow gauging site and other locations along a river. A hydraulic model (such as HEC-RAS) can be used to model the relationship between flow and depth at ungauged locations. Like all models, the accuracy of hydraulic models depends on the amount of data available for calibration and the results will become less reliable if the model is used to extrapolate beyond the range of calibration measurements. These models require information on the shape of the cross-sections of the river and are calibrated to the water levels measured at known flow rates. This process involves several areas of uncertainty: Survey – due to cost limitations, between six and 15 cross-sections are typically captured per site. More cross-sections would enable a better understanding of the hydraulic conditions in the stream. More cross-sections would also allow better calibration of a model, especially in lowland areas where stream gradients are low. Measured water levels – due to cost limitations, water levels are usually measured on a single day, thereby representing water level for one particular flow. This means that the calibrated hydraulic model is accurate for that flow, but will be less accurate for significantly higher or lower flows. Estimation of flows at the site – commonly, study sites are located away from established stream gauging sites. In upland areas, it is possible to estimate flows because they are typically proportional to the upstream catchment area. Lowland areas are more complex, as a combination of surface water contributions and groundwater interaction can sometimes make flows along a reach highly variable and unpredictable. A better understanding of groundwater interaction in lowland streams would be helpful (i.e. identifying which reaches are gaining or losing during low-flow periods). The cost associated with the field measurements needed to define the cross-sections along the river and obtain measurements for calibration can limit the application of hydraulic models. However, LiDAR data is becoming more widely available (particularly along waterways) and can be used to obtain much of the information needed for hydraulic models for larger lowland streams, provided the LiDAR is captured during periods of very low flow or is able to provide ground-surface information below the water surface. Unfortunately, for narrow streams or upland streams, LiDAR currently does not have sufficient resolution to identify some of the key habitat features. In addition, the presence of significant tree cover makes LiDAR less effective, obscuring details of habitat and geomorphology along stream banks. Even with the availability of LiDAR data it may be a costly exercise to develop hydraulic models for all sites in which water managers wish to understand the nature of low flows. There may be some water depths that are critical for ecological processes (e.g. to maintain connectivity between pools). A NATIONAL WATER COMMISSION — Low flows report series 31 review of the flows where these depths are provided – at sites that have a hydraulic model available – may allow generalisations that can be applied to other sites. For example, SKM (2005) compared the minimum low flows recommended by 10 environmental flow studies from Victoria and found that the recommendation most commonly corresponded to flow with an exceedence value of 90 per cent or more. However, a large variation in results was observed – both between different studies and between different reaches within each study. An important aspect of management during low-flow periods is the protection of refuges or locations where water will remain in-stream even during cease-to-flow events. These locations can be identified if the geomorphology of the stream is well understood. LiDAR information or a detailed survey of a waterway can be used to identify pools along the river. The length of time these pools will contain water will depend on the rate of evaporation and also the nature of the connectivity with the groundwater. While there is good coverage of measurements to enable estimates of evaporation to be made, the nature of groundwater interactions at such a specific location may be more difficult. 7.3. Summary From an ecological perspective it is important to consider the magnitude of low flows in conjunction with the hydraulic characteristics of the stream. ARI recommends that further consideration be given to low-flow indicators that represent hydraulic characteristics (Rolls et al. 2010). Hydraulic models can be used to understand the relationship between flow and water levels along a river, but it can be costly to obtain all of the required model inputs. The issues and gaps related to understanding the hydraulic characteristics of low flows are: considerable time and expense is required to understand the hydraulic characteristics of a stream at present little information is available to help water managers understand the longevity of pools during a cease-to-flow event the location of weirs and flow-control structures are not always known. NATIONAL WATER COMMISSION — Low flows report series 32 8. Summary of issues and gaps The gaps and limitations in monitoring and modelling low flows identified are compiled in the table below, with the key gaps and limitations denoted in bold text. NATIONAL WATER COMMISSION — Low flows report series 33 Table 2: Summary of identified gaps for monitoring and modelling low flows Topic Low-flow indicators Measuring and monitoring Estimating flows in unregulated catchments Issues and gaps 1 The indices do not enable comparison between regions. 2 The uncertainty associated with low-flow indicators is not well understood. 3 Most low-flow indicators can be calculated using existing software, with the exception of indicators related to antecedent and post low-flow event conditions. 4 There are difficulties in deriving daily time-series of flow to calculate the flow indicators in data-poor areas. 5 It is difficult to prioritise the adoption of the 28 low-flow indicators. 6 The estimation of a natural time-series of flow requires assumptions about the role of anthropogenic effects in cease-to-flow events. 7 The influence of longer-term climate regime variability (or change) on the lowflow indicators is not well understood. 8 Reference natural (and current) flows are poorly archived and are usually not readily available from state agencies for ongoing use. (Note this does not refer to gauged streamflows.) 9 The length of data required to calculate low-flow indicators associated with less frequent events is not known. 10 The likelihood of low-flow events under future scenarios is not well understood. 11 Inconsistent language is used to refer to low-flow metrics, indicators and descriptors. 12 Users are unaware of the uncertainty in low-flow streamflow measurements. 13 Streamflows at many important ecological locations are not gauged. 14 Real-time flow information is not widely available. 15 Current locations and monitoring frequencies of streamflow and diversion gauging may not adequately measure and safeguard water being provided to meet ecological needs. 16 The water levels in off-stream waterbodies are important, but not commonly measured. 17 Limited number of gaugings available during low-flow periods. 18 The measurement uncertainty associated with water levels will vary between different instrumentation. 19 Difficulty measuring very low flows using a current meter. 20 Measurement of low flows at unstable cross-sections. 21 The benefits of emerging streamflow measurement technologies in measuring low flows are not widely understood. 22 Ecologists need to be able to identify cease-to-flow events. 23 Current monitoring techniques do not pick up subsurface flow. 24 There is flow through in fish passages that is not recorded during gauging. 25 The relative ability of commonly available rainfall-runoff models to represent low flows is not widely understood. 26 No study has been conducted to determine which objective functions should be used to calibrate to low flows. 27 The catchment characteristics that control low-flow behaviour are difficult to identify and characterise. NATIONAL WATER COMMISSION — Low flows report series 34 Topic Estimating flows in unregulated catchments cont’d Estimating flows in regulated catchments Estimating anthropogenic influences Mechanisms generating low flows Hydraulic characteristics Issues and gaps 28 A method to rapidly determine the hydrological similarity of catchments with respect to low flows is not available. 29 Transposition methods tend to be based on transposition factors related to the average flow. 30 The shift in climate in south-eastern and south-western Australia during the past 10 to 30 years has created uncertainties in the accuracy of previously calibrated rainfall-runoff models. 31 The selection of catchment model parameters for ungauged catchments introduces uncertainty. 32 A substantial amount of effort is required to adequately estimate a timeseries of daily streamflows at an ungauged site. 33 The location of perennial stream reaches and low-flow refuges for in-stream biota is not always known. 34 Rainfall-runoff models are not useful for modelling processes at a small scale (e.g. waterhole). 35 It can be difficult to determine the low-flow paths in poorly defined channels. 36 There are large uncertainties associated with estimates of river losses. 37 River losses may be represented poorly within a model. 38 Not all models are represented on a daily time-step. 39 Model may not represent the daily operation of a water supply system. 40 Models do not include dynamic representation of water trading. 41 Models may not represent cease-to-flow events well. 42 Models may not be calibrated to represent low flows and the limitations may not be communicated to all relevant stakeholders. 43 The degree of regulation and effect on low flows can vary considerably across a region. 44 Smart meters are not widely used - a strong business case for their use is needed 45 Estimates of irrigation water use on a daily time-step are poor. Many of the decisions are based on poor interpretation and representation of the behaviour of irrigators in the river system models. 46 Difficulty in estimating anthropogenic influences at a daily time-step. 47 Readily available information on low-flow discharge locations from sources such as wastewater treatment plants, return flows from irrigation and coal seam gas. 48 The seasonal impact of land use change on streamflows is not very well understood. 49 Floodplain structures and small weirs located on a waterway can alter lowflow characteristics. 50 The volume of pumping from waterholes is not well known. 51 There are a range of issues around monitoring and modelling of groundwater extractions. 52 Worldwide there has been little investigation into the mechanisms that generate low flows. 53 Few studies have monitored surface water/groundwater interactions in losing streams. 54 The location of gaining and losing river reaches is not mapped outside of the Murray-Darling Basin. 55 Considerable time and expense is required to understand the hydraulic characteristics of a stream. 56 At present little information is available to help water managers understand the longevity of pools during a cease-to-flow event. NATIONAL WATER COMMISSION — Low flows report series 35 57 The location of weirs and flow-control systems is not always known. NATIONAL WATER COMMISSION — Low flows report series 36 PART II: Identifying solutions NATIONAL WATER COMMISSION — Low flows report series 37 9. Proposed solutions 9.1. Introduction Part I of this report identified more than 50 gaps and limitations in the current monitoring and modelling of low flows. At this stage of the project a workshop was held with specialists with knowledge and experience of low-flow hydrology, water resource supply modelling, hydraulic modelling, hydrography and ecology (Appendix B) to review the gaps and limitations already identified, extend or contract these as necessary, prioritise them and identify possible solutions (Appendices C and D). The workshop’s main outcome was 11 proposed solutions to address key gaps (see Section 0). The proposed solutions will be refined and prioritised through consultation with a broader group of stakeholders via the project advisory group. The highest priority will be pursued in Stage 2 of the Low Flows project. 9.2. Proposed solutions Solutions to address each of the issues and gaps are proposed in the table below. Details of eleven solutions are provided in Section 0. NATIONAL WATER COMMISSION — Low flows report series 38 Table 3: Summary of solutions to gaps in monitoring and modelling low flows Topic Low-flow indicators Issues and gaps Proposed solutions 1 The indices do not enable comparison between regions. Proposal 1 in Section 0 2 The uncertainty associated with low-flow indicators is not well understood. Proposal 2 in Section 0 3 Most low-flow indicators can be calculated using existing software, with the exception of indicators related to antecedent and post low-flow event conditions. Proposal 2 in Section 0 4 There are difficulties in deriving daily timeseries of flow to calculate the flow indicators in data-poor areas. Investigate the use of low-flow indicators that can be derived from monthly data in data-poor areas. 5 It is difficult to prioritise the adoption of the 28 low-flow indicators. Investigate the redundancy in the 28 lowflow indicators. 6 The estimation of a natural time-series of flow requires assumptions about the role of anthropogenic effects in cease-to-flow events. Develop guidelines to help practitioners estimate cease-to-flow events in a natural time-series of flow. 7 The influence of longer-term climate regime variability (or change) on the low-flow indicators is not well understood. Invest in a long-term research program. 8 Reference natural (and current) flows are poorly archived and are usually not readily available from state agencies for ongoing use. (Note this does not refer to gauged streamflows.) A database of time-series of reference natural (and current) streamflows could be established and maintained for use in ecohydrologic studies. Information should be available about the quality of the modelled streamflows, including what anthropogenic influences have been considered in the derivation of natural flows and what level of development was adopted for the current flows. NATIONAL WATER COMMISSION — Low flows report series 39 Topic Monitoring Estimating flows in Issues and gaps Proposed solutions 9 The length of data required to calculate lowflow indicators associated with less frequent events is not known. Proposal 2 in Section 9.3 10 The likelihood of low-flow events under future scenarios is not well understood. Use stochastic data to predict the likelihood of future low-flow events. 11 Inconsistent language is used to refer to low-flow metrics, indicators and descriptors. Adopt the nomenclature used in the Sustainable Rivers Audit. 12 Users are unaware of the uncertainty in lowflow streamflow measurements. Proposal 3 in Section 9.3 13 The streamflows at many important ecological locations are not gauged. Proposal 4 in Section 9.3 Streamflow measurements are commonly used to represent a larger river reach. Metadata that defines the river reach that is represented by each gauge may help planners and managers select the most appropriate streamflow gauge for any assessment. 14 Real-time flow information is not widely available. Proposal 3 in Section 9.3 15 Current locations and monitoring frequencies of streamflow and diversion gauging may not adequately measure and safeguard water provided to meet ecological needs. Proposal 4 in Section 9.3 16 The water levels in off-stream waterbodies are important, but not commonly measured. Proposal 4 in Section 9.3 17 Limited number of gaugings available during low-flow periods. Provide a funding scheme to collect more gaugings during low-flow events at important sites. 18 The measurement uncertainty associated with water levels will vary between different instrumentation. Proposal 3 in Section 9.3 19 Difficulty measuring very low flows using a current meter. Discuss with NRETAS hydrographers the potential for research or alternative technologies to better monitor low flows in carbonate aquifer catchments. 20 Measurement of low flows at unstable crosssections. The use of calibrated flow structures can be used to improve the measurement of low flows at unstable cross-sections. 21 The benefits of emerging streamflow measurement technologies in measuring low flows are not widely understood. Identify when and where new techniques are economically advantageous over the more traditional approaches in monitoring low flows. However, at present these technologies do not provide better measurements of low flows than conventional methods. Investigate using remote sensing information to provide information about pool depth or area. 22 Ecologists need to be able to identify ceaseto-flow events. Proposal 3 in Section 9.3 23 Current monitoring techniques do not pick up subsurface flow. Proposal 3 in Section 9.3 24 There is flow through fish passages that is not recorded during gauging. Proposal 3 in Section 9.3 25 The relative ability of commonly available rainfall-runoff models to represent low flows Proposal 5 in Section 9.3 NATIONAL WATER COMMISSION — Low flows report series 40 Topic Issues and gaps unregulated catchments is not widely understood. Estimating flows in regulated catchments Proposed solutions 26 There has been no study to determine which objective functions should be used to calibrate to low flows. Proposal 5 in Section 9.3 27 The catchment characteristics that control low-flow behaviour are difficult to identify and characterise. Proposal 11 in Section 9.3 28 A method to rapidly determine the hydrological similarity of catchments with respect to low flows is not available. Undertake a study to develop a tool to rapidly determine the similarity of catchments with regard to low flows. 29 Transposition methods tend to be based on transposition factors related to the average flow. Proposal 5 in Section 9.3 30 The shift in climate in south-eastern and south-western Australia during the past 10 to 30 years has created some uncertainties in the accuracy of previously calibrated rainfall-runoff models. Proposal 5 in Section 9.3 A review of the calibration period of rainfallrunoff models across southern Australia and a recalibration of those models to more recent data should be undertaken where this has not already occurred. 31 The selection of catchment model parameters for ungauged catchments introduces uncertainty. Provide funding to ongoing research in this area. 32 A substantial amount of effort is required to adequately estimate a time-series of daily streamflows at an ungauged site. Develop models to estimate low-flow indicators from catchment characteristics. 33 The location of perennial stream reaches and low-flow refuges for in-stream biota is not always known. Develop an atlas of refuges. Proposal 6 in Section 0 34 Rainfall-runoff models are not useful for modelling processes at a small scale (e.g. waterhole). Proposal 6 in Section 0 35 The channel is not always well defined and it can be difficult to determine the low-flow paths. Use remote sensing to identify flow paths. 36 There are large uncertainties associated with estimates of river losses. Proposal 7 in Section 0 37 River losses may be represented poorly within a model. Proposal 7 in Section 0 Establish and publish plausible ranges of river losses for different river systems that can be used to verify model results. 38 Not all models are represented on a daily time-step. Provide funding to help agencies convert models to a daily time-step. 39 Model may not represent the daily operation of a water supply system. Provide funding to help agencies improve or update the representation of operational practices within the models. 40 Models do not include dynamic representation of water trading. Improve the understanding of likely water market behaviour during low-flow periods and include this knowledge in water resource models. 41 Models may not represent cease-to-flow events well. Provide funding to help agencies improve representation of cease-to-flow events in models. 42 Models may not be calibrated to represent low flows and the limitations may not be communicated to all relevant stakeholders. Proposal 7 in Section 0 43 The degree of regulation and effect on low flows can vary considerably across a region. Develop a regional summary of the location of regulation and the effect of regulation on NATIONAL WATER COMMISSION — Low flows report series 41 Topic Issues and gaps Proposed solutions low flows. Estimating anthropogen ic influences Mechanisms generating low flows Hydraulic characteristi cs 44 A business case for the use of smart meters has not been prepared. Proposal 8 in Section 9.3 45 Estimates of irrigation water use on a daily time-step are poor. Many of the decisions are based on poor interpretation and representation of the behaviour of irrigators in the river system models. Proposal 9 in Section 9.3 46 Difficulty in estimating anthropogenic influences at a daily time-step. Undertake detailed studies for a range of case study sites to examine the impact of anthropogenic influences on daily low-flow indicators. Develop model to estimate these changes in other catchments. 47 Readily available information on low-flow discharge locations from sources such as wastewater treatment plants, return flows from irrigation and coal seam gas. Map low-flow discharge locations across Australia. 48 The seasonal impact of land use change on streamflows is not very well understood. Proposal 10 in Section 9.3 49 Floodplain structures and small weirs located on a waterway can alter low-flow characteristics. Promote the availability and use of LiDAR information. 50 The volume of pumping from waterholes is not well known. Invest in additional metering. 51 There are a range of issues around monitoring and modelling of groundwater extractions. Invest in additional metering. 52 Worldwide there has been little investigation into the mechanisms that generate low flows. Proposal 11 in Section 9.3 53 Few studies have monitored surface water/groundwater interactions in losing streams. Undertake a monitoring program in some losing streams. 54 The location of gaining and losing river reaches is not mapped outside of the Murray-Darling Basin. Extend the study to regions outside the Murray-Darling Basin that have sufficient data. 55 Considerable time and expense is required to understand the hydraulic characteristics of a stream. Promote the availability and use of LiDAR information. Investigate the relationship between critically important water depths and lowflow indicators. 56 At present little information is available to help water managers understand the longevity of pools during a cease-to-flow event. Proposal 4 in Section 9.3 Proposal 6 in Section 9.3 Mapping of major pools along rivers. Investigation of the connection of these pools to the groundwater system. Collection of anecdotal evidence about the persistence of pools during recent cease-toflow events. Where a gauging station is located in a weir pool it will continue to measure water levels after a cease-to-flow event. This information could be used to better understand the persistence of waterholes in a region. 57 The location of weirs and flow-control systems is not always known. Promote the availability and use of LiDAR information. NATIONAL WATER COMMISSION — Low flows report series 42 NATIONAL WATER COMMISSION — Low flows report series 43 9.3. Key proposed solutions Proposal 1: Develop low-flow indicators for regional comparison Objective: To enable comparison of low-flow indicators at sites across a region. Description: Low-flow indicators provide one means to objectively assess the relative environmental risk due to changes in the low-flow regime. ARI reviewed the literature related to low-flow ecology and indicators and created a list of 28 low-flow indicators (Rolls et al., 2010). A comparison of flow stress at the regional scale is often required. A meaningful comparison is possible if the low-flow indicators are described in relation to the variability of the natural flow regime. Using this approach: a high score represents a score that is well within the conditions experienced under natural conditions and a low score represents deviation from the natural conditions. A range-standardised approach has been adopted in other studies of flow indicators (i.e. Sustainable Rivers Audit and the Victorian Flow Stress Ranking) and the concepts developed in these studies should be applied to low-flow indicators. Outcomes: Low-flow indicators that can be used to meaningfully compare low-flow indicators across a region. Expected timeline for completion: six to 12 months Proposal 2: Improve awareness of the uncertainty associated with low-flow indicators Objective: To improve awareness of the uncertainty associated with low-flow indicators. Description: The uncertainty associated with low-flow indicators originates from a number of sources. The derivation of a daily time-series of streamflows may be based on measured streamflows that are affected by measurement error. Where measured streamflows are not available, or a time-series representing natural conditions is required, modelled streamflows are generated. These also rely on a series of assumptions which also contain uncertainty. The length of the period of streamflows used to calculate the low-flow indicators will also contribute to the overall uncertainty. The possible magnitude of uncertainties associated with low-flow magnitudes will be demonstrated using a number of case studies. Key sources of uncertainty (e.g. measurement uncertainty) will be identified, quantified and combined to estimate the overall uncertainty. The uncertainty analysis may also be used to investigate issues such as the: relative accuracy of indicators calculated using daily and monthly time-series relationship between accuracy and length of record used to calculate flow indicators sensitivity of each low-flow indicator to each source of uncertainty the ability to detect relative changes in an indicator between scenarios where the absolute value of the indicator is uncertain. Based on the outcomes of the case study, guidelines will be developed to allow similar analyses to be undertaken in other regions. These guidelines would also present a standard approach for communicating information about uncertainty and guidance on how to use the information to improve decision making. NATIONAL WATER COMMISSION — Low flows report series 44 Most low-flow indicators can be calculated using existing software, with the exception of indicators related to antecedent and post low-flow event conditions. These software packages could be updated to incorporate the additional indicators and expanded to enable the uncertainty in the flow indicators to be calculated. Outcomes: Clear guidance on the likely magnitude of uncertainty in low-flow indicators; methods and tools to quantify the uncertainty; an understanding of the main factors contributing to the uncertainty; and guidelines for using this information to improve decision making. Expected timeline for completion: one to two years Proposal 3: Improve the availability of streamflow information and metadata Objective: To improve the availability of streamflow information and provide metadata to allow planners and managers to assess whether streamflows measured or modelled at a site are suitable for a particular purpose. Description: Most states have made data available on the internet, however the management of low flows requires real-time information about low flows and may be improved if data were available online. The suitability of a streamflow time-series for a particular purpose will depend on the quality of measurements made during low-flow periods. The quality of streamflow data will vary between gauges and some may provide poor measurements of low flows. Little information is available to help users assess the accuracy of the streamflow measurements and consequently determine their suitability for a particular purpose. Metadata that would provide useful information includes a description of: the stability of the cross-section and presence of anabranches the ability to detect a cease-to-flow event any structures that bypass the gauge (such as a fish ladder) any qualitative information available regarding subsurface flow list of any known flow-regulating structures upstream the gauging history quality codes associated with each flow measurement the accuracy of the water level measurements the uncertainty associated with streamflow measurements of varying magnitudes. An additional task could be added to this proposal; that is, establishing and maintaining a database of time-series of reference natural (and current) streamflows for use in eco-hydrologic studies. Information should be available on the quality of the modelled streamflows, including what anthropogenic influences were considered in the derivation of natural flows and what level of development was adopted for the current flows. This proposal has been developed to improve the information available for helping practitioners select appropriate gauges for low-flow analysis. However, the availability of this information has wider benefits and will allow the suitability of sites to be assessed for a range of purposes. Outcomes: A database of all Australian streamflow gauges and locations of modelled streamflows that provides information to allow users to assess the suitability of data for a particular purpose. NATIONAL WATER COMMISSION — Low flows report series 45 Expected timeline for completion: one to two years Proposal 4: Increase metering and monitoring of ecologically relevant sites Objective: To increase the metering of low-flow events at ecologically relevant sites. Description: Monitoring of water levels and streamflows provides important information for the management of low flows. Not all ecologically relevant sites are currently metered. In particular, the water levels in pools and off-stream waterbodies are important, but not commonly measured. Key ecologically relevant sites that are not currently monitored need to be identified. At some sites water level measurements may be sufficient. The work required to monitor these sites needs to be quantified and used to rank the sites according to the benefit of monitoring relative to the required investment. The assessment should also consider the homogeneity of the flows along the reach to identify the region represented by any additional gauges. The benefits associated with this proposal may extend beyond a better understanding of low flows. Outcomes: Extended network of water level and streamflow monitoring. Expected timeline for completion: Ongoing Proposal 5: Develop guidelines for estimating low flows Objective: To improve the accuracy of modelled low flows. Description: Methods to estimate flows at ungauged locations have traditionally been aimed at improving estimates of system yield, not low flows. Estimation of low flows may require a different approach. Guidance is required to help modellers choose between using streamflow transposition or a rainfall-runoff model to estimate low flows at a given site. Guidance is also required to help modellers apply these techniques to low flows. A transposition method suited to low flows needs to be developed and guidance provided for its application that includes the selection of an appropriate gauge and calculation of a transposition factor. Guidance is required to help modellers select an appropriate rainfall-runoff model, calibration period and objective function for use during calibration. In particular, the guidelines should highlight the importance of recalibrating models using recent periods of low flows. Outcomes: Guidelines that recommend an appropriate model selection and calibration strategy for low flows. Expected timeline for completion: six to 12 months. Proposal 6: Improve understanding of the location and longevity of pools and waterholes Objective: To improve the understanding of the location and longevity of pools and waterholes. Description: At present little information is available to help water managers understand the longevity of pools during a cease-to-flow event. Firstly, the location of perennial streams, permanent pools and waterholes should be mapped based on recent past extreme droughts and making use of remote sensing information. Off-river storages such as farm dams may also be important for identifying regional-scale refuges. Models to predict the persistence of pools should be developed and used to extrapolate data from measured systems to other systems. NATIONAL WATER COMMISSION — Low flows report series 46 Outcomes: Map of the location of pools and waterholes and models to predict the persistence of these waterbodies. Expected timeline for completion: one to two years. Proposal 7: Improve representation of losses in water resource supply models Objective: To transparently and consistently represent losses within water resource system models. Description: The representation of losses in models varies between agencies and even individual modellers. In many models the ‘loss’ will represent the errors in the model in addition to the physical process. Furthermore, losses in the models are often temporally static and only reflect average conditions. Guidelines that outline best practice are required to improve the representation of losses in these models. These guidelines will cover the methods recommended for quantifying losses, appropriate methods for representation in a model, calibration strategies and reporting requirements. The guidelines will also outline how the operational decisions made by system operators affect system losses and how to represent these decisions within the model. Outcomes: Adoption of a consistent and improved modelling approach will give planners and managers greater confidence in the estimates of low flows generated by water resource supply models. Expected timeline for completion: six to 12 months. Proposal 8: Develop a business case for smart metering Objective: To identify when and where smart meters are economically advantageous to install and use. Description: Trials of the use of smart meters on private diversions have occurred in a number of places around Australia. The preliminary outcomes of these trials highlight that a wealth of information can be obtained, particularly in relation to the management of private diversions at low flows. The use of these meters in other regions could play a critical role in real-time management of water, especially in managing for low-flow ecological responses in unregulated systems. A business case for the use of smart meters on private diversions and other extractions (e.g. groundwater bores, farm dams) could be used to identify when and where smart meters are economically advantageous to install and use. The benefits of this proposal would extend beyond a better understanding of low flows. Outcomes: Planners and managers who can make informed decisions on smart metering. Expected timeline for completion: four to six months Proposal 9: Improve modelling of irrigation water use Objective: To improve estimates of relevant time-step irrigation water use. Description: Estimates of irrigation water use on a daily time-step are poor. Models of crop water requirements are available and widely accepted. However, these models do not account for irrigator behaviour that may be responding to other drivers such as allocation announcements and commodity prices. As such, many of the models are based on poor interpretation and representation of the behaviour of irrigators. More sophisticated models are required to reflect the uncertainty in irrigator behaviour. The benefits of this proposal would extend beyond a better understanding of low flows. NATIONAL WATER COMMISSION — Low flows report series 47 Outcomes: More realistic estimates of daily (or relevant time-step) irrigation water use and as a consequence, improved estimates of low flows. Expected timeline for completion: one to two years Proposal 10: Improve understanding of the seasonal impacts of land use change on low flows Objective: To understand the seasonal impacts of land use change on low flows. Description: The seasonal impact of land use change on streamflows is not very well understood, but it is expected the effect will be greater during lows flows than other parts of the flow regime. Existing datasets may be used to compare land use change impacts between seasons. Outcomes: Seasonal impacts of land use change. Expected timeline for completion: four to six months Proposal 11: Review mechanisms that generate low flows Objective: To improve the understanding of the mechanisms that generate low flows. Description: An understanding of the mechanisms that generate low flows is required to predict the impact of climate change scenarios on low flows and to most effectively address issues of stress during low-flow periods. Worldwide there has been little investigation into the mechanisms that generate low flows. A comprehensive review of the existing literature is required to summarise the state of knowledge, identify key gaps and propose a research agenda to improve knowledge related to the drivers of low-flow events. The outcomes of the review may also be used to assess how well these processes are represented within rainfall-runoff models. Outcomes: A review of the mechanisms that generate low flows and a clear research agenda that may lead to the development of better models and more accurate identification of losses. Expected timeline for completion: four to six months. NATIONAL WATER COMMISSION — Low flows report series 48 Appendices Appendix A: Low-flow indicators Descriptors of low-flow hydrology (hydrological metrics) within priority components of the flow regime, their known ecological relevance and eco-regional differences. Source: Australian Rivers Institute (Rob Rolls, Nick Marsh, Fran Sheldon) via the ecological component of the low flows project. HYDROLOGIC METRIC U T DEFINITION SOURCE EXPECTED ECOLOGICAL RELEVANCE & CAVEATS ECO-REGIONAL (& OTHER) DIFFERENCES Stage 1b, modified from Puckridge et al. (1998) • Historical factors affect evolutionary adaptations of aquatic biota and can inform as to whether a system is typically ‘dry’ or ‘wet’, thereby informing the expected ecological responses • Cumulative effects of reduced discharge impact community more strongly than short-term effects (Finn et al. 2009) • Long-term data may be required to assess ecological recovery from low flow and drought events (Dewson et al. 2007, a-d) • Recovery will also depend on event duration, magnitude, timing and frequency (Lake 2003) • Recovery may be confounded by lag effects due to different levels of tolerance and adaptations to low-flow conditions (including antecedent and post-flow characteristics). Positive response of algal and invertebrates with short-generations may be fast; those of aquatic macrophytes, large invertebrates and fish may be prolonged (Lake 2008) Temporary/intermittent systems • Long-term antecedent conditions may be the driving force behind invertebrate responses (Fritz & Dodds 2002). • Adaptations of biota to variable connectivity may reduce detection of ecological responses. • Recovery may be quick for highly adapted and tolerant taxa, particularly for invertebrates (e.g. Caruso 2002) • Antecedent flow permanence may be critical in determining invertebrate community responses (Stubbington et al. 2009) Groundwater-dependent systems • Recovery of invertebrates may correlate with recovery of groundwater inputs • Rapid recession may lower recruitment of floodplain spawners compared with channel spawners (Puckridge et al. 1998); increased burrowing and stranding of certain fish species (e.g. galaxids) may occur along with short-term increases in invertebrate drift (Dewson et al. 2007b; James & Suren 2009) Stream size • Drift is unlikely to be viable escape strategy in small shallow streams (James & Suren 2009) Principle 1: Antecedent and post low-flow event conditions Median of sums of 4 A every 3, 5 and 7 years’ annual number of zeroflow days Median of the sums of every 3, 5 and 7 years’ annual number of days having zero flow (moving count) CV sums of every 3, 5 and 7 years’ annual number of zero-flow days CV in the sums of every 3, 5 and 7 years’ annual number of days having zero flow (moving count) 7 A Median of sums of 4 A every 3, 5 and 7 years’ annual number of <baseflow days Median of the sums of every 3, 5 and 7 years’ annual number of days having below baseflow but above zero flow (moving count) CV sums of every 3, 5 and 7 years’ annual number of <baseflow days 7 A CV in the sums of every 3, 5 and 7 years’ annual number of days having below baseflow but above zero flow (moving count) Median of the 30d, 90d, 1y, 2y and 5y discharge before and after the annual minimum 1 M, Median of the total discharge over S, monthly, seasonal and annual A timeframes before and after the occurrence of the annual minimum Fall rate before below baseflow conditions 6 D CV fall rate 7 D Mean rate of negative changes in flow Modified from one day to the next before flows from Olden with <baseflow magnitude and Poff (2003) CV in rate of negative changes in flow from one day to the next before flows with <baseflow magnitude NATIONAL WATER COMMISSION — Low flows report series 49 HYDROLOGIC METRIC U T DEFINITION SOURCE EXPECTED ECOLOGICAL RELEVANCE & CAVEATS ECO-REGIONAL (& OTHER) DIFFERENCES Kennard et al. (2010) • Extended low flows may increase competitive interactions between predators and prey (Bond 2008) and may restrict species dispersal, especially for fish (Arthington & Pusey 2003) • Extended low-flow duration may lead to reduction in water quality, increased salinity (from surface water concentration and or groundwater intrusion), hypoxia or anoxia, algal blooms and increased retention of organic matter (Lind et al. 2006; Lake 2008) • High variability in low-flow duration may correlate with brief and/ or flexible lifecycles of aquatic biota (Puckridge et al. 1998) • Prolonged low flows may temporarily increase the density of aquatic biota, but abundances and richness may decline as the low-flow period extends • Extended low- or zero-flow days may lead to dominance by physically tolerant taxa, more large carnivores, and mortality from predation, parasitism and/or starvation (Puckridge et al. 1998; Lake 2008; Burford et al. 2008) • Time between flow pulses may control algal growth (Caruso 2001) Temporary/ intermittent systems • ‘Increased dry-spell duration in dryland or intermittent rivers will lead to reduced diversity and biomass of invertebrates and fish due to reduction in permanent, suitable aquatic habitat’ (Poff et al. 2010: 157) • ‘Increased duration of extreme low flows will result in riparian canopy die-back in arid to semi-arid landscapes’ (Poff et al. 2010: 157) Semi-arid and temperate regions of the Murray-Darling river system • Some fish species spawn and recruit during extended lowflow periods and warmer months (‘low-flow recruitment hypothesis’; Humphries et al. 1999) Dryland systems (e.g. Cooper Creek) • Increased disconnection among habitats may increase spatial variability in macroinvertebrate and fish assemblages (Sheldon et al. 2002; Arthington et al. 2005) • Low variability in magnitude may be correlated with greater proportions or abundances of flow-adapted taxa and encourage the growth of aquatic macrophytes (Bunn & Arthington 2002) • “Depletion of low flows will lead to progressive reduction in total secondary production as habitat area becomes marginal in quality or is lost” (Poff et al. 2010: 157) Perennial systems • ‘Depletion of extreme low flows in perennial streams and subsequent drying will lead to rapid loss of diversity and biomass in invertebrates and fish due to declines in wetted riffle habitat, lowered residual pool area⁄depth when riffles stop flowing, loss of connectivity between viable habitat patches and poor water quality’ (Poff et al. 2010: 157) Principle 2: Duration Annual minima of 1, 3, 7, 30 and 90 day means 1 D, Magnitude of minimum annual flows M, of various duration, ranging from S daily to seasonal (i.e. 1, 3, 7, 30 and 90 days respectively) CV annual minima of 1, 7 D, CV in magnitude of minimum annual 3, 7, M, flows of various duration, ranging 30 and 90 day means S from daily to seasonal (i.e. 1, 3, 7, 30 and 90 days respectively) Low-spell duration (<75th, <90th and <99th percentile) 4 A Mean duration of flows which remain below a lower threshold defined by the 75th, 90th and 99th percentiles, respectively (from the flow duration curve) CV low- spell duration 7 A (<75th,<90th and <99th percentile CV in duration of annual occurrences during which the magnitude of flow remains below a lower threshold (75th, 90th and 99th percentiles, respectively) Number of zero-flow days 5 A Mean annual number of days having zero flow CV number of zero-flow 7 A days CV in annual number of days having zero flow Number of <baseflow days 5 A Mean annual number of days having below baseflow but above zero flow CV number of <baseflow days 7 A CV in annual number of days having below baseflow but above zero flow Median of annual minimum flows 7 A Median of the lowest annual daily flow divided by the mean annual daily flow averaged across all years Baseflow index 7 A Ratio of baseflow to total flow, averaged across all years, where baseflow is calculated using three way digital filter Barma Water & SKM Principle 3: Magnitude Kennard et al. (2010) NATIONAL WATER COMMISSION — Low flows report series 50 HYDROLOGIC METRIC U T DEFINITION SOURCE EXPECTED ECOLOGICAL RELEVANCE & CAVEATS ECO-REGIONAL (& OTHER) DIFFERENCES • ‘Augmentation of low flows: may lead to an initial increase in total primary and secondary production but this would decline with drowning of productive riffles and/or increased turbidity and decreased light penetration; will cause a decline in richness and abundance of species with preferences for slow-flowing, shallow- water habitats, whereas fluvial specialists or obligate rheophilic species would shift in distribution or decline in richness and abundance if low flows were depleted; will result in increased establishment and persistence of aquatic and riparian vegetation with concomitant shifts in species distributions towards increased dominance by fewer species’ (Poff et al. 2010: 157) • Decreased magnitude (and extended duration) will reduce riffle habitat availability and convert deeper, pool zones into refugia • Decreased magnitudes may reduce fish body size and/or growth rates (Harvey et al. 2006; Walters & Post 2008) Spatial location of refugia • In systems where riffle habitats and refugia (e.g. pools or waterholes) are spatially close, broadscale or highly significant changes in biotic assemblages may not be detected • Frequency and timing of low-flow events affect long-term species diversity, lifehistory strategies, and the timing and extent of recovery • Increased variability of frequency of low flows may increase variation in water quality (Magoulik & Kobza 2003) • High variability of timing may correlate with flexible life-history characteristics (Puckridge et al. 1998) • Low predictability may be correlated with flexible breeding systems (Puckridge et al. 1998) • In general, Australian macroinvertebrates are well-adapted to high levels of flow variability (low predictability) and their responses may be too subtle to detect. However, this may not apply in regulated systems where natural levels of flow variability have been lost • Decreased variability (increased predictability) may lead to the loss of refugial habitat resulting in decreased species abundance and diversity, and inhibit the dispersal and migration of biota (Leigh & Sheldon 2008) • Water abstraction and groundwater extraction will have the greatest ecological impacts during times of naturally occurring low-flow periods, particularly in small streams (Deitch et al. 2009) • Predictability and seasonality may be driven by regulated, unregulated, tropical or other types of riverine systems Perennial systems • Stable baseflows in subtropical and tropical regions are important for fish spawning and recruitment during low-flow periods (Bunn & Arthington 2002) Perennial systems with regular flow regimes • Increased variability may reduce ecosystem function and lead to loss of spawning and other life-history stage triggers resulting in decreased species abundance and diversity (Leigh & Sheldon 2008) Floodplain rivers • Decreased frequency of drying may reduce microinvertebrate (e.g. zooplankton) richness and result in adverse effects on waterbird and fish breeding in floodplains (Jenkins & Boulton 2003) Temporary and highly intermittent systems • Increased variability may lead to shifts in community composition (Leigh & Sheldon 2008) • Decreased variability may reduce ecosystem function and species beta (among habitat)-diversity (Leigh & Sheldon 2008) Wet-dry tropics (Grayson et al. 1996) CV Baseflow Index 7 A CV in Baseflow Index Low-flow discharge (75th, 90th, and 99th percentile) 1 A 75th, 90th and 99th percentile, respectively from the flow duration curve Specific mean annual minimum runoff 2 A Mean annual minimum flow divided by catchment area Principle 4: Frequency and timing (predictability) Low-flow spell count (<75th,<90th and <99th percentile) 5 A Mean number of annual occurrences during which the magnitude of flow remains below a lower threshold defined by the 75th, 90th and 99th percentiles, respectively (from the flow duration curve) CV of low-flow spell count (<75th, <90th and <99th percentile) 7 A CV in number of annual occurrences during which the magnitude of flow remains below a lower threshold (75th, 90th and 99th percentiles, respectively) Julian date of annual minimum 7 D Mean Julian date of the 1-day annual minimum flow across all years CV Julian date of annual minimum 7 D CV in Julian date of the 1-day annual minimum flow across all years Kennard et al. (2010) NATIONAL WATER COMMISSION — Low flows report series 51 HYDROLOGIC METRIC U T DEFINITION SOURCE Predictability (P) of minimum daily flow 7 D Colwell’s (1974) predictability (P) of minimum daily flow Seasonality (M/P) of minimum daily flow 7 D Colwell’s (1974) seasonality (M/P) of minimum daily flow Variability of annual number of trough to trough pulses 7 A Variability (range/median) of number Puckridge of annual trough to trough et al. occurrences (1998) Inverse of variability between months of number of monthly troughs 7 M Inverse of variability (median/range) between months of the number of troughs in each month EXPECTED ECOLOGICAL RELEVANCE & CAVEATS ECO-REGIONAL (& OTHER) DIFFERENCES • Changes in seasonality and increased variability of low-flow periods may reduce ecosystem function and lead to the loss of spawning and other life-history stage triggers resulting in decreased species abundance and diversity (Leigh & Sheldon 2008) U, units of measurement: 1, ML d-1; 2, ML d-1 km-1; 4, d; 5, d y-1; 6, ML d-1 d-1; 7, dimensionless. T, temporal aspect of the metric: D, daily; M, monthly; S, seasonal; A, annual. Independence criteria for low-spell frequency and duration = 7 d between spells. Colwell's (1974) predictability (P) of flow is composed of two independent, additive components: constancy (C – a measure of temporal invariance) and contingency (M – a measure of periodicity), calculated using mean, minimum and maximum daily flows, respectively, in each month, and 11 flow classes (log2 class size) with a central class of 20x mean daily flow. NATIONAL WATER COMMISSION — Low flows report series 52 NATIONAL WATER COMMISSION — Low flows report series 53 Appendix B: Scoping workshop participants Name Organisation Key expertise Tom McMahon University of Melbourne Hydrology Nurella Ozbey Thiess Services Victoria Hydrography Steve Clarke Water Technologies Hydraulic modelling Ray Evans Sinclair Knight Merz Hydrogeologist Bill Young Murray-Darling Basin Authority Modelling, hydrology etc Malcolm Watson Australian Bureau of Meteorology Flow indicators Jon Marshall Queensland Department of Environment and Resource Management Ecology Sonia Colville DEWHA Lake Eyre Basin Water policy/process Rory Nathan Sinclair Knight Merz Hydrology Paul Wettin Consultant Water management etc (Daren Barma Barma Water Resources Modelling, hydrology) (Lisa Lowe Sinclair Knight Merz Hydrology) NATIONAL WATER COMMISSION — Low flows report series 54 Appendix C: Scoping workshop notes Note – these points accompany the table of issues, gaps and solutions. 1. 2. 3. Low-flow indicators The indicators have little value unless the environmental objectives are clear. The ecology is also affected by non-hydrological factors during low flows (e.g. water quality). The language used in the report around indicators, descriptors and metrics needs to be tighter. The SRA will provide guidance on the appropriate terminology to use. The scoping paper suggests that only 15 years of data is required to calculate the indicators. The emphasis in the scoping paper should be changed to make it clear that this is a minimum requirement only as the length of record increases, so does the robustness of the indicators. Monitoring low flows The scoping report makes the assumption that streamflow gauging is the primary data source. There may be other ecologically relevant data, such as remotely sensed data. Stage data may be useful, even without the ability to convert to a flow using a rating curve. Estimating low flows in unregulated and ungauged catchments 4. Estimating low flows in the regulated system 5. 6. The definition of an unregulated catchment varies across Australia. The scoping report needs to better define the difference between a regulated and unregulated system. A water supply model is not always appropriate for estimating natural flows. These models tend to be calibrated to the current system operation and geomorphology that won’t apply under natural conditions. Quantifying anthropogenic influences It is not clear to what extent anthropogenic influences need to be considered. For example, do changes to the system that occurred 200 years ago need to be considered? The reference condition may not need to be the pre-European flow data as the available ecological habitat does not necessarily represent pre-European conditions. Mechanisms generating low flows An improved understanding of the mechanisms that generate low flows will be useful if water managers are able to control/manage these mechanisms. NATIONAL WATER COMMISSION — Low flows report series 55 7. 8. 9. Hydraulic characteristics The length of time that water remains in a pool is an important aspect of the lowflow regime. Only in-channel low flows were considered by the workshop. It is recommended that any consideration of flooding be removed from the project scope. Other Low flows can be an ecological benefit or ecological stress. The issue of scale wasn’t discussed in the scoping paper. The scale at which the ecology is being considered will drive the monitoring and modelling required. For example, the monitoring and modelling required will vary between assessments of the ecology at a particular water hole versus across the entire Murray-Darling Basin. Priority solutions The priority solutions identified during the workshop and presented to the broader workshop were: The low-flow indicators need to be comparative across a region and over time. A common language to define indicators/descriptors/metrics is required. The uncertainty associated with indicators will vary with the method of calculation, the type of indicator and the length of record used. It is recommended that several case studies are undertaken to demonstrate the possible magnitude of uncertainties associated with low-flow indicators. Metadata should be provided with streamflow gauging data (e.g. stability of control, presence of a fish passage etc.) to help users determine if the data is suitable for their needs. Users are unaware of the uncertainty in low-flow streamflow measurements. It is recommended that tools be developed to allow users to better understand this uncertainty. Install simple depth probes in-stream and in waterholes to improve monitoring of low flows. Develop guidelines for rainfall-runoff modelling that cover the selection of a model, choice of calibration period, objective function etc. Improve understanding of the nature of river losses by undertaking a review of previous studies and undertake additional field investigations. Different approaches are used by modellers to characterise losses, even within the same organisation. It is recommended that guidelines be developed to improve the representation of losses in models. The operational decisions made regarding expected losses in a river will influence low flows. These decisions are not adequately included in water supply system models. Further investment should be used to identify when and where smart meters are economically advantageous to install and use in both surface water and groundwater systems. NATIONAL WATER COMMISSION — Low flows report series 56 The impact of land use change at a sub-annual time-step is not well understood and further research is required to estimate low flows under a natural flow scenario. The behavioural decisions made by irrigators needs to be better understood and represented in models of irrigation water use to produce more meaningful daily demand patterns. Worldwide there has been little investigation into the mechanisms that generate low flows. A literature review of this topic is recommended. NATIONAL WATER COMMISSION — Low flows report series 57 Appendix D: Table of issues, gaps and solutions The table presented in this appendix was used to facilitate discussion during the workshop. The table lists all of the identified issues and gaps and was used to identify possible solutions as well as any further gaps. The table was also used to document discussion related to the rationale behind the proposed solution, the practicalities of the proposed solution, any dependencies and the regional applicability of the solution. The content of the table that was generated before the workshop is in black text, and the content added during the workshop is in orange text. NATIONAL WATER COMMISSION — Low flows report series 58 Topic Low-flow indicators Issues and gaps Possible solutions Existing gaps in the current monitoring and modelling of low flows to achieve environmental objectives Possible solutions to address issues and fill gaps Most low-flow indicators can be calculated using existing software, with the exception of indicators related to antecedent and post low-flow event conditions. Incorporate these additional indicators into existing software packages used in the industry. The indices do not enable comparison between regions. Apply a rangestandardised approach. Relevance of Relevance of Regional issue/gap solution applicability How relevant or important is the proposed issue or gap in terms of improved water planning and management? (e.g.1: urgently needs filling for ungauged catchments across Australia; e.g.2: important in SA, NT and WA in the long term) a. How relevant is the proposed solution in terms of improved water planning &management? (e.g.1. relevant now across Vic and NSW; e.g.2: v important in SE Aust in long term, not relevant to SW Aust) b. Is a better solution(s) potentially available?* a. How well does the solution fit with existing jurisdictional processes, systems, technologies etc.? b. What is the spatial extent and temporal scale of relevance to the solution? There is little need for this solution as most indicators can already be calculated in existing software packages. This is an issue that is not well thought about in the table of low-flow indicators. Relevant where we want to make comparisons across a region. The rangestandardised approach allows sites to be compared against the likelihood of risk to the ecological system. There are difficulties Investigate the use Practicality and dependencies a. How technically or conceptually difficult is the proposed solution? b. Are external inputs required to achieve a successful outcome? c. To what extent does solution add value to existing investment? Expected cost and timeline a. What is the anticipated cost? b. What is the anticipated time to implement (given costing above)? c. What is the potential for coinvestment? Overall priority High/med/low priority from the perspective of this group? Easily applied when required. The individual indicators will have varying importance in different regions. Key In some regions and NATIONAL WATER COMMISSION — Low flows report series 59 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability in deriving daily time-series of flow to calculate the flow indicators in datapoor areas. of low-flow indicators that can be derived from monthly data in data-poor areas. It is difficult to prioritise the adoption of the 28 low-flow indicators. Investigate the redundancy in the 28 low-flow indicators. The uncertainty in the indicators is also important and could be used to select the smaller subset of indicators. The estimation of a natural time-series of flow requires assumptions about the role of anthropogenic effects in cease-toflow events. Develop guidelines to help practitioners estimate cease-toflow events in a natural time-series of flow. It is important that ecologists and water planners and managers can identify cease-toflow events. The uncertainty associated with lowflow indicators is not well understood. Undertake several case studies to demonstrate the possible magnitude of uncertainties associated with lowflow indicators. The sensitivity of each indicator to the various sources of uncertainty could also be explored. Practicality and dependencies Expected cost and timeline Overall priority time scales the use of monthly data is appropriate. This solution is more appropriate when the ecological outcomes are better defined and data is available. The relevance of this solution will depend on the ability of ecologists and decision makers to use the information. – An uncertainty analysis can be used to demonstrate how the uncertainty can most efficiently be reduced. – An uncertainty analysis could be used to compare the accuracy of using daily versus monthly streamflows. This solution could lead onto a study to develop guidelines (or a tool) to undertake similar analysis in other systems. This would have greater regional applicability. Key – The uncertainty associated with the low-flow indicators originates from several sources, including the NATIONAL WATER COMMISSION — Low flows report series 60 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority uncertainty in deriving the daily timeseries, the length of record used in derivation. The solution would need to consider a range of sources of uncertainty. Develop a standard approach for communicating information about uncertainty. The communication of uncertainty varies and may cause confusion in the public. A consistent approach needs to be developed and widely adopted. The influence of longer-term climate regime variability (or change) on the lowflow indicators is not well understood. NATIONAL WATER COMMISSION — Low flows report series 61 Topic Issues and gaps Possible solutions Reference natural (and current) flows are poorly archived and are usually not readily available from state agencies for ongoing use. (Note this does not refer to gauged streamflows.) Either the Bureau of Meteorology, state agencies or local catchment management agencies establish and maintain timeseries of reference natural (and current) streamflows at key environmental flow sites for use in eco-hydrologic studies. This should include indications of what anthropogenic influences have been considered in the derivation of natural flows. The language in the scoping study used to refer to indicators/ descriptors/ metrics is loose. The scoping study should be revised to provide consistency in the language used. The length of data required to calculate low-flow indicators associated with less frequent events is not known. Investigate the length of data required to calculate individual low-flow indicators. The likelihood of low-flow events Use stochastic data to predict the Relevance of Relevance of Regional issue/gap solution applicability The data may be available within a given organisation, but not publically available. The metadata associated with the time-series of flows should also be made available so users are aware of the limitations or assumptions required to generate the time-series. –The assumptions made to generate a time-series of the reference condition will vary between sites (e.g. does the reference condition take into account changes in land use?). The assumptions made in generating these time-series are not always clear. Practicality and dependencies Expected cost and timeline Overall priority The bureau isn’t currently planning to collect this information. Key This is a major research NATIONAL WATER COMMISSION — Low flows report series 62 Topic Monitoring Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority activity. under future scenarios is not well understood. likelihood of future low-flow events. Limited number of gaugings available during low-flow periods. Provide a funding scheme to collect more gaugings during low-flow events at important sites. Changes in the river cross-section will have a larger impact at the low-flow range. Regular gauging is required to pick up the small changes in the cross-section that will influence the measurement of flows over this range. Regular review and reporting of uncertainty associated with low flows at a variety of sites. Information on the uncertainty of gauges is not widely available. The measurement uncertainty associated with water levels will vary between different instrumentation. Users are unaware of the uncertainty in low-flow streamflow measurements. Key Development of a tool to allow users to rapidly assess the uncertainty with the low flows. Provision of access to gauging history and quality codes for all online hydrologic data. Difficulty measuring Discuss with NATIONAL WATER COMMISSION — Low flows report series 63 Topic Issues and gaps very low flows using a current meter. Measurement of low flows at unstable cross-sections. Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority NRETAS hydrographers the potential for research or alternative technologies to better monitor low flows in carbonate aquifer catchments. None, apart from ensuring that sites are adequately selected for low flows. The selection of a suitable crosssection is very important for measuring low flows. The use of calibrated flow structures can be used to improve the measurement of low flows at unstable cross-sections. The benefits of emerging streamflow measurement technologies in measuring low flows are not widely understood. The streamflows at many important ecological locations are not gauged. Identify when and where new techniques are economically advantageous over the more traditional approaches in monitoring low flows. Assemble an inventory of important ecological locations that are not currently gauged and assess the Improved measurement technologies could be used to improve rating curves at low flows. The acoustic doppler provides better measurements at high flows. Currently these technologies do not provide better measurements at low flows than conventional methods. Little to follow up here. The location of current gauging stations may not be at sites that represent the larger NATIONAL WATER COMMISSION — Low flows report series 64 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability practicality of monitoring at these sites. system. The selection of sites is based on where it is possible to undertake gaugings. Identify river reaches that are represented by each gauge. The spatial relevance of a gauge may vary between ecological values. Real-time flow information is not widely available. Provide real-time flow information on a widely accessible website. Ecologists need to be able to identify cease-to-flow events. Set up a web-cam at gauging sites (or other important sites) to monitor if there is flow. This type of investigation has already been undertaken for the MDB, but is not available nationally. Practicality and dependencies Expected cost and timeline Overall priority Key (partly linked to the above point) Key At many locations there is a control structure that makes it easy to identify when there is a cease-to-flow event. This is only difficult in natural crosssections. Identify gauges which can ‘accurately’ determine if there is a cease-to-flow event. Recession curves can be used to identify cease-toflow events. Current monitoring NATIONAL WATER COMMISSION — Low flows report series 65 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority techniques do not pick up subsurface flow. There is flow through fish passages that is not recorded during gauging. Estimating flows in unregulat ed catchment s The water levels in off-stream waterbodies are important, but not commonly measured. Invest money in establishing water level measurement in off-stream waterbodies. The catchment characteristics that control low-flow behaviour are difficult to identify and characterise. Review existing literature that describes the catchment characteristics that influence low flows and identify and collate spatial datasets available that relate to these catchment characteristics. A method to rapidly determine the hydrological similarity of catchments with respect to low flows is not available. Undertake a study to develop a tool to rapidly determine the similarity of catchments with regard to low flows. Transposition methods tend to be based on transposition factors related to the average flow. Develop a transposition method suited to low flows. Key The way flow data is interpolated between gauging stations is generally based on yield considerations and NATIONAL WATER COMMISSION — Low flows report series 66 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority does not take into account losses along the river reach. The losses may not always be evenly distributed along a river reach. The relative ability of commonly available rainfall-runoff models to represent low flows is not widely understood. Review the ability of commonly available rainfall-runoff models to represent low flows and develop an information sheet. – It may be difficult to model low flows using a rainfallrunoff model because low flows occur when there has been little rainfall. Low flows are determined by the ‘buckets’ used to model groundwater stores. – Better guidance is needed to help modellers select an appropriate model for different purposes. – Linked surface water/groundwater models have been developed. A more suitable approach may be possible. – Review the algorithms used to look at groundwater discharges. This review could draw on the work undertaken by Boughton and the development of the IHACRES model. Key – also consider the calibration time period required, appropriate calibration procedure and objective functions. This solution could also link to the uncertainty issue/solution. – Models need to represent the persistence of flow in a river. The shift in climate in south-eastern and south-western Australia over the past 10 to 30 years has created some uncertainties in the accuracy of previously calibrated rainfall-runoff A review of the calibration period of rainfall-runoff models across southern Australia and a recalibration of those models to more recent data should be undertaken where NATIONAL WATER COMMISSION — Low flows report series 67 Topic Issues and gaps Possible solutions models. this has not already occurred. There has been no study to determine which objective functions should be used to calibrate to low flows. Undertake a study. The selection of catchment model parameters for ungauged catchments introduces uncertainty. Provide funding for ongoing research in this area. A substantial amount of effort is required to adequately estimate a time-series of daily streamflows at an ungauged site. Develop models to estimate low-flow indicators from catchment characteristics. Atlas of perennial streams and lowflow refuges for instream biota. Map perennial streams and permanent pools during recent past extreme droughts. Rainfall-runoff models are not useful for modelling processes at a small scale (e.g. waterhole). Develop deterministic models to represent smallerscale systems. Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies There are some objective functions that are commonly used to calibrate to low flows, but these have not been formally tested. Expected cost and timeline Overall priority Key A similar atlas has been prepared in the United States over a long period of time. The maps show a decrease in the number of perennial streams. Qld has done some work modelling the persistence of waterholes. These models are used when NATIONAL WATER COMMISSION — Low flows report series 68 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority IQQM shows no flow. The channel is not always well defined and it can be difficult to determine the low-flow paths. Use remote sensing to identify flow paths. The key issue is the location of waterholes and their longevity. Melbourne University has done some work in this area. (Note: this is also an issue for monitoring low flows.) Estimating flows in regulated catchment s Not all models are represented on a daily time-step. Provide funding to help agencies convert models to a daily time-step. There are large uncertainties associated with estimates of river losses. Improve understanding of the nature of river losses by undertaking a review of previous studies. Several of these reviews have already been done. A short review (a couple of days) is recommended that focuses on developing experiments to obtain more data. Key – link to the next action. Undertake additional field investigations and analysis to ‘fill in the gaps’ found during the review. A better way to address this issue is to undertake a water balance for reaches that takes into account other inflows and outflows. Increase the number of sites where gaugings are taken to improve the quantification of river losses. River losses may be Review and assess In existing models Develop guidelines Key NATIONAL WATER COMMISSION — Low flows report series 69 Topic Issues and gaps represented poorly within a model. Possible solutions the adequacy of methods to represent river losses within models. Relevance of Relevance of Regional issue/gap solution applicability the ‘loss’ will incorporate the errors in the model. The loss functions in models do not always represent real processes. for modelling losses in these models. Practicality and dependencies Expected cost and timeline Overall priority – The representation of losses in models varies between organisations and individual modellers. System operators make an assessment of forecasted system losses when they release water. The operational decisions made should be represented in the models. Also, any improved estimates of river losses should be fed back to system operators. Key – but include as a subset of above. Establish and publish plausible ranges of river losses for different river systems that can be used to verify model results. Model may not represent the daily operation of a water supply system. Provide funding to help agencies improve or update the representation of operational practices NATIONAL WATER COMMISSION — Low flows report series 70 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority within the models. Models do not include dynamic representation of water trading. Improve the understanding of likely water market behaviour during low-flow periods and incorporate this knowledge into water resource models. Models do not represent cease-toflow events well. For example in Qld IQQM models when the modelled flow is less than 2 ML/day, it is assumed to be a cease-to-flow event. Models may not be calibrated to represent low flows and the limitations may not be communicated to all relevant stakeholders. Review of the ability of existing models to represent low flows at ecologically important locations. The degree of regulation and effect on low flows can vary considerably across a region. Estimating anthropog enic influences Difficulty in estimating anthropogenic influences at a daily time-step. Undertake detailed studies for a range of case study sites to examine the impact of anthropogenic influences on daily It would be useful to understand the stochastic properties of anthropogenic activities. NATIONAL WATER COMMISSION — Low flows report series 71 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority low-flow indicators. Develop model to estimate these changes in other catchments. A business case for the use of smart meters on private diversions has not been prepared. Further investment could be used to identify when and where smart meters are economically advantageous to install and use. Readily available information on lowflow discharge locations from sources such as wastewater treatment plants, return flows from irrigation and coal seam gas. Map low-flow discharge locations across Australia. The seasonal impact of land use change on streamflows is not very well understood. Key – but expand to be more holistic. An understanding of the magnitude of historical return flows is important as they are required to estimate historical anthropogenic influences. It may be appropriate to adopt a reference condition that includes the current land use. – Land use is changing in irrigation systems as a response to low water availability (e.g. Shepparton region). Alice Best’s PhD in this area may have data that could be useful for looking at the seasonal influences of land use change. Lower than other solutions. – Low flows may be more sensitive to changes in land use than other parts of NATIONAL WATER COMMISSION — Low flows report series 72 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority the flow regime. Need to understand where it is important to understand anthropogenic changes. Estimates of irrigation water use on a daily time-step are poor. Many of the decisions are based on poor interpretation and representation of the behaviour of irrigators in the river system models. This issue influences both groundwater and surface water extractions. Key The accuracy of diversions in systems will improve after modernisation activities. There are a range of anthropogenic influences that will affect low flows. These include floodplain structures and small weirs located on a waterway. Even a mining road can alter low-flow characteristics. The volume of pumping from waterholes is not NATIONAL WATER COMMISSION — Low flows report series 73 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority well known. There are a range of issues around monitoring and modelling of groundwater extractions. Mechanis ms generatin g low flows Hydraulic characteri stics There are issues in understanding the number and volume of domestic and stock extractions. Few studies have monitored groundwater and surface water interactions in losing streams. Undertake a monitoring program in some losing streams. The location of gaining and loosing river reaches is not mapped outside of the Murray-Darling Basin. Extend the study to regions outside the MDB that have sufficient data. Worldwide there has been little investigation into the mechanisms that generate low flows. Undertake a literature review of what is known and what the gaps are and identify the next steps of a study. An improved understanding of the mechanisms may guide improvement of modelling of low flows. Considerable time and expense is required to understand the hydraulic Promote the availability and use of LiDAR information. LiDAR information can be used for characterisation of wetlands and channels. This issue is driven by the spatial scale. The results are more useful at a smaller spatial scale, e.g. more relevant for Lindsay Walpole Island, but less relevant at the MDB scale. The results are sensitive to the time at which the measurements are taken. Key – Sophisticated models are not needed to better use LiDAR data. – The timing of NATIONAL WATER COMMISSION — Low flows report series 74 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability characteristics of a stream. Practicality and dependencies Expected cost and timeline Overall priority data capture is important. The information is best when it is captured during periods of low (or no) flows. It may be difficult to obtain good data at weir pools or areas that are always inundated. Investigate the relationship between critically important water depths and low-flow indicators. At present little information is available to help water managers understand the longevity of pools during a cease-toflow event. Mapping of major pools along rivers. LiDAR data can be used to identify where there is still water in the system (remnant waterholes) after a period of low flows. Remote sensing data may be better to do this. Investigation of the connection of these pools to the groundwater system. Collection of anecdotal evidence about the persistence of pools during recent ceaseto-flow events. NATIONAL WATER COMMISSION — Low flows report series 75 Topic Issues and gaps Possible solutions Relevance of Relevance of Regional issue/gap solution applicability Practicality and dependencies Expected cost and timeline Overall priority Put in some low cost water level meters. Remote sensing data. Where a gauging station is located in a weir pool it will continue to measure water levels after a cease-to-flow event. This information could be used to better understand the persistence of waterholes in a region. Develop models to predict the persistence of pools. Use these models to extrapolate data from measured systems to other systems. Location of weirs and flow-control systems. Use of LiDAR data to identify these structures. Can identify these structures from LiDAR data if you are looking specifically for these, but can be hard to identify. * If a better solution(s) is proposed please add/insert a new line to the table and assess solution with criteria NATIONAL WATER COMMISSION — Low flows report series 76 NATIONAL WATER COMMISSION — Low flows report series 77 References Allen, RG, Pereira, LS, Raes, D & Smith, M 1998, Crop evapotranspiration - guidelines for computing crop water requirements, no. 56, Food and Agriculture Organization of the United Nations. Australian Bureau of Meteorology 2010, Improving water information. 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