DNA Technology Biotechnology Biotechnology can be defined as the use of technology to control biological processes as a means of meeting societal needs At its most basic level, biotechnology includes animal and plant breeding Biotechnology is a broad category that currently encompasses: The production of transgenic organisms Techniques to clone animals The reprogramming of cells to become different types of cells The use of biotechnology in forensics A transgenic organism is an organism whose genome carries one or more genes from another species Many biotechnology products are produced within transgenic organisms Genetic Engineering The production of transgenic organisms makes use of recombinant DNA technology This makes use of enzymes normally produced in bacteria Restriction enzymes DNA ligase Scientists have genetically engineered bacteria to mass-produce a variety of useful chemicals, from cancer drugs to pesticides, and transferred genes from bacteria to plants and from one animal species to another Recombinant DNA Techniques Bacteria are the workhorses of modern biotechnology To manipulate genes in the laboratory, biologists often use bacterial plasmids - small, circular DNA molecules that duplicate separately from the larger bacterial chromosome DNA from any organism (including humans) can be inserted into plasmid DNA Plasmid DNA is isolated from bacteria The transgenic bacteria can then produce the gene products desired Restriction enzymes act as molecular scissors, recognizing specific DNA sequences and cutting them Cutting both the target DNA and the plasmid DNA with the same restriction enzyme gives complementary “sticky ends”, allowing splicing of the target DNA into the plasmid This produces recombinant DNA Gel Electrophoresis Cutting DNA gives a variety of DNA fragments We often need to separate those fragments using gel electrophoresis This method separates the DNA fragments based on length The same recombinant DNA techniques are used to make other transgenic organisms Like golden rice or cassava enriched for beta carotene to help prevent Vitamin A deficiency and its resulting blindness or the Innate potato that resists bruising and produces less of a cancercausing chemical when fried or the Arctic apple that resists turning brown when sliced or bruised 3/20/15 The Food and Drug Administration said that genetically engineered non browning apples and bruise-resistant potatoes were as safe and nutritious as their conventional counterparts or transgenic goats producing important proteins in their milk or even cows producing hypoallergenic milk 2-3% of babies are allergic to cow milk and experience diarrhea and vomiting Human Gene Therapy Human gene therapy is intended to treat disease by introducing genes into an afflicted person In cases where a single defective gene causes a disorder, the mutant version of a gene may be replaced or supplemented with the normal allele This could potentially correct a genetic disorder, perhaps permanently In other cases, genes are inserted and expressed only long enough to treat a medical problem Despite all of the promise associated with this technology, there have been few successes 2000-2011 - gene therapy cured 22 children with severe combined immunodeficiency (SCID) These patients had no immune system, requiring them to remain isolated within protective “bubbles” However, there were some problems as well DNA Profiling and Forensic Science DNA profiling is the analysis of DNA samples to determine whether they come from the same individual and has rapidly transformed the field of forensics To produce a DNA profile, scientists compare sequences in the genome that vary from person to person DNA Profiling Techniques - PCR The polymerase chain reaction (PCR) is a technique by which a specific target segment of DNA can be amplified quickly and precisely, and permits scientists to obtain enough DNA from even minute amounts of blood or other tissue to allow a DNA profile to be constructed Short Tandem Repeat (STR) Analysis How do you prove that two samples of DNA come from the same person? Repetitive DNA makes up much of the DNA that lies between genes in humans Short tandem repeats (STRs) are short sequences of DNA tenderly repeated many times in the genome DNA profiling can also be used to confirm paternity Genomics Genomics is the study of complete sets of genes (genomes) of organisms The Human Genome Project Begun in 1990, the Human Genome Project was a massive scientific endeavor to determine the nucleotide sequence of all the DNA in the human genome and identify the location and sequence of every gene More than 99% of the genome had been determined to 99.999% accuracy About 3 billion nucleotide pairs were identified About 21,000 genes were found About 98% of the human DNA was identified as noncoding Some noncoding DNA is made up of gene control sequences (promoters, enhancers, and microRNAs) Some noncoding regions include introns and repetitive DNA Some noncoding DNA is important to our health, with certain regions known to carry disease-causing mutations The function of most noncoding DNA is unknown The DNA sequences of ancient species have also been determined, including our relatives In 2013, scientists sequenced the entire genome of a 130,000-year-old female Neanderthal (Homo neanderthalensis) Scientists used DNA extracted from a toe bone found in a Siberian cave to identify a new species (Homo denisovans) related to modern humans