Oil palm genome sequences by methylation filtration

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Table S2. Categorization of EG and EO genes into KEGG pathways
Pathways
ABC transporters
Alanine, aspartate and glutamate metabolism
alpha-Linolenic acid metabolism
Amino sugar and nucleotide sugar metabolism
Aminoacyl-tRNA biosynthesis
Ascorbate and aldarate metabolism
Basal transcription factors
Base excision repair
Biosynthesis of unsaturated fatty acids
Carotenoid biosynthesis
Circadian rhythm - plant
Citrate cycle (TCA cycle)
Cyanoamino acid metabolism
Cysteine and methionine metabolism
Diterpenoid biosynthesis
DNA replication
Endocytosis
Fatty acid biosynthesis
Fatty acid metabolism
Flavone and flavonol biosynthesis
Flavonoid biosynthesis
Folate biosynthesis
Fructose and mannose metabolism
Galactose metabolism
Glutathione metabolism
Glycerolipid metabolism
Glycerophospholipid metabolism
Glycine, serine and threonine metabolism
Glycolysis / Gluconeogenesis
Glycosaminoglycan degradation
Glycosylphosphatidylinositol(GPI)-anchor
biosynthesis
Glyoxylate and dicarboxylate metabolism
Histidine metabolism
Inositol phosphate metabolism
Limonene and pinene degradation
Linoleic acid metabolism
Lipoic acid metabolism
Lysine biosynthesis
Metabolic pathways
N-Glycan biosynthesis
Nicotinate and nicotinamide metabolism
EG
1
2
1
8
6
2
2
3
1
4
3
8
3
10
4
3
3
9
2
2
1
0
3
1
1
5
3
8
16
2
EO
0
0
1
3
0
1
0
1
0
1
0
2
0
5
1
1
1
0
0
0
2
1
1
0
0
1
1
2
6
0
1
2
1
6
2
5
0
1
2
4
1
0
6
1
2
0
3
1
0
1
2
0
1
Pathways
Nitrogen metabolism
Non-homologous end-joining
Oxidative phosphorylation
Pantothenate and CoA biosynthesis
Pentose and glucuronate interconversions
Pentose phosphate pathway
Peroxisome
Phagosome
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Phenylpropanoid biosynthesis
Photosynthesis
Photosynthesis - antenna proteins
Plant-pathogen interaction
Porphyrin and chlorophyll metabolism
Proteasome
Protein export
Protein processing in endoplasmic reticulum
Purine metabolism
Pyrimidine metabolism
Pyruvate metabolism
Ribosome
RNA degradation
SNARE interactions in vesicular transport
Spliceosome
Starch and sucrose metabolism
Steroid biosynthesis
Taurine and hypotaurine metabolism
Terpenoid backbone biosynthesis
Tryptophan metabolism
Tyrosine metabolism
Ubiquinone and other terpenoid-quinone
biosynthesis
Ubiquitin mediated proteolysis
Valine, leucine and isoleucine biosynthesis
Zeatin biosynthesis
EG
1
1
25
1
1
3
0
6
9
2
3
8
8
10
1
5
1
8
8
3
1
23
4
0
13
13
1
1
3
1
0
EO
1
1
28
0
1
3
1
1
2
1
2
15
2
5
1
1
2
6
9
1
1
8
2
1
6
3
2
0
0
3
1
4
4
1
2
1
1
1
1
2
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