Page 1 Validity of a self-administered food-frequency questionnaire in the estimation of heterocyclic aromatic amines Motoki Iwasaki, et al. Supplementary Material Laboratory analysis Materials and reagents 2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) and 2-amino -1-(trideuteromethyl)-6-phenylimidazo[4,5-b]pyridine ([2H3C]PhIP) (99% isotopic purity) were purchased from Toronto Research Chemicals (Toronto, ON, Canada). Methanol-d4 was purchased from Sigma Aldrich Japan (Tokyo, Japan). 10%SDS solution was purchased from Wako Pure Chemical (Osaka, Japan). InertSep® Slim J Aroma-Blue was purchased from GL Sciences (Tokyo, Japan). Soluene 350 was purchased from PerkinElmer (Waltham, MA, USA). LC/MS grade MeOH and acetic acid were purchased from Wako Pure Chemical (Osaka, Japan). All other reagents were high purity from Wako Pure Chemical (Osaka, Japan) and Sigma Aldrich Japan (Tokyo, Japan). Standard solution and calibration curve The stock standard solution of PhIP (1 mg/mL) was prepared in MeOH and then diluted with MeOH to give a final concentration of 1 ng/μL and stored at -80 °C until use. The stock standard solution of internal standard [2H3C]PhIP (1 mg/mL) was prepared in methyl-d3 alcohol-d and stored at -80 °C until use. Internal standard was diluted in MeOH to give a final concentration of 1 ng/μL each time the analyses were done. Page 2 Quantification was conducted using internal standard calibration with [2H3C]PhIP. The calibration curve was established as the area ratios between the analyte and internal standard versus the added amount of analyte per sample. The standard solution was prepared by adding the standards, diluted in mobile phase (40 μM ammonium acetate (pH 4.0): MeOH, 1:1, v/v), as follows: 0.027, 0.054, 0.1, 0.2, 0.4, 0.8 pg/μL for human hair samples and 0.2, 0.4, 0.8, 1.67, 3.33, 16.7, 33.3, 40.0 pg/μL for rat fur samples. The amount of internal standard was 4 pg/μL. The coefficient of determination values of the slopes of the calibration curves exceeded 0.99. The limit of detection (LOD) and the limit of quantification (LOQ) were set to 3 and 10 times the standard deviation (SD) of the noise, respectively. The LOD and LOQ for the present analytical method were 13 and 45 pg/g hair, respectively. Human hair and rat fur samples (preparation) The sample was washed (about 1g for human hair and 5mg for rat fur) in 0.1% SDS solution (100 mL) by ultrasonication for 5 min. The liquid was then decanted, and the sample was washed in MeOH (100 mL) by ultrasonication for 5 min. The liquid was again decanted, and the sample was washed 4 times with water (100 mL), once with ethanol (50 mL), and dried at room temperature. Extraction procedure The dried sample was weighed (1 g for human hair and 2 mg for rat fur), and 1 mol/L NaOH (100 mL) and internal standard ([2H3C]PhIP; 2 ng for human hair and 30 ng for rat fur) were added. This solution was incubated at 80 °C for 1 h. After additional centrifugation at 3100 rpm and 4 °C for 10 min, the supernatant was filtrated with Page 3 ADVANTEC 5B filter paper. The filtrate was neutralized to pH 7-9 with 6 mol/L HCl, and extracted using InertSep® SlimJ Aroma-Blue. A washing procedure with 60 mL H2O was performed and the analytes were eluted with 20 mL of MeOH:28%NH3 (50:1, v/v) (flow rate, 5 mL/min). The eluate was concentrated under vacuum. The residue was dissolved in 1 mL of MeOH. After centrifugation of 3100 rpm and 4 °C for 10 min, the supernatant was collected, and then concentrated under vacuum. The residue was dissolved in 2 mL of 0.1 mol/L HCl. After washing with 2 mL of n-hexane, the aqueous layer was adjusted to pH>10 with 28% NH3, and then extracted twice with 2 mL of dichloromethane. The organic layer was concentrated under vacuum. For human hair samples, the sample residue was dissolved in 500 μL of 40 μM ammonium acetate (pH4.0): MeOH (1:1, v/v), filtrated with 45 μm filter (centrifugal filter units, Millipore, Bedford, MA, USA), and an aliquot of 300 μL was injected onto the LC-ESI/MS/MS. For rat fur samples, the sample residue was dissolved in 750 μL of 40μM ammonium acetate (pH4.0): MeOH (1:1, v/v), filtrated with 45 μm filter, and the sample was diluted 10-fold with solvent and injected at 200 μL/500 μL onto the LC-ESI/MS/MS. LC-ESI/MS/MS analysis of PhIP Chromatography was performed with a Shimadzu series VP model (Shimadzu, Kyoto, Japan) equipped with an analytical column at a temperature of 40 °C. Chromatographic separation was performed based on a previously described method (1). In brief, the analytes were separated on a gradient with a column-switching technique. The mobile phase consisted of A: 40 μM ammonium acetate in H2O (pH 4.0), B: MeOH, and C: 10 mM ammonium acetate in H2O. First, 300μL of the sample was injected, and loaded onto the extraction column with C solvent at a flow rate of 2.0 mL/min for 8 min. The valve Page 4 was then switched, and the analyte was introduced into the analytical column at a flow rate of 0.2 mL/min. An Inertsil ODS-4 column (GL Sciences, Tokyo, Japan) was used to improve peak shape for routine analysis (analytical column: 2.1 mm x 15 cm, 5 μm particle size; extraction column: 3.0 mm x 10mm, 5 μm particle size). The gradient program was as follows: 13% B (0-5 min) - 50% B (5.01-13 min). The mass spectral data were obtained by electrospray ionization (ESI)-MS, which was performed on an API 2000 (AB Sciex, Foster City, CA, USA) equipped with a modified TurboIonSpray® source. Instrument settings for the mass spectrometer were set as follows: declustering potential (DP) 36 V, entrance potential (EP) 10.5 V, collision energy (CE) 39 V, nebulizer gas (GS1) 30 pounds per square inch (psi), turbo gas (GS2) 80 psi, curtain gas (CUR) 40 psi, collision gas (CAD) 8 psi, ion spray voltage (IS) 5000 V and temperature 500 °C. Analysis of processed samples was performed in positive ion mode using multiple reaction monitoring (MRM) with the following transitions: PhIP and [2H3C]PhIP (precursor ion/product ion), 225.0/210.0 and 228.0/210.0. The instrument operations and data manipulations were controlled with Analyst version 1.4.1 software. Spectrophotometric characterization of melanin Human hair and rat fur sample (1mg) and sepia melanin (1mg) were dissolved in 1 mL of a mixture of Soluene 350:H2O (9:1,v/v), followed by heating at 95 °C for 45 min, as in a previous study (1). Optical density was observed at 500 and 650 nm (A500 and A650) with a Jasco V-550 (Japan Spectroscopic, Tokyo, Japan). DNA adduct analysis Rat colon DNA was extracted and purified using a Gentra® Puregene™ tissue kit Page 5 (QIAGEN, Valencia, CA). The protocol was performed according to the manufacturer's instructions. DNA samples in 40-μg aliquots were digested into their constituent 2'-deoxyribonucleoside-3'-monophosphate units by micrococcal nuclease, spleen phosphodiesterase, nuclease P1 and alkaline phosphatase as described previously (2). N2-(deoxyguanosine-8-yl)-2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (dG-C8-PhIP) measurement was used under the same procedure as described previously (3). Briefly, the DNA adduct-containing supernatant was purified by solid phase extraction (SPE) using HYPERSEP C18 (50 mg) cartridges (Thermo Scientific, Bellefonte PA, USA). The SPE cartridges were first washed with methanol containing 0.1% formic acid followed by conditioning with 10% methanol in 0.1% formic acid. The DNA digest samples were loaded and unmodified 2′- deoxynucleosides were removed with 10% methanol in 0.1% formic acid. The dG-C8-PhIP adduct was eluted with methanol containing 0.1% formic acid. The eluent was evaporated to dryness by vacuum centrifugation and resolved in 30% DMSO solution and subjected to liquid chromatography tandem mass spectrometry (LC/MS/MS). LC/MS/MS analyses were performed using a Waters 2795 LC system (Waters, Manchester, UK) interfaced with a Quattro Ultima triple stage quadrupole MS (Waters). The LC column was eluted over a gradient that began at a ratio of 20% acetonitrile in 0.1% acetic acid, changing to 95% acetonitrile over a period of 30 min. Samples were separated on a Shim-pack FC-ODS column (150 × 4.6 mm, 3 μm, Shimadzu, Kyoto, Japan) and eluted at a flow rate of 0.4 mL/min. Mass spectral analyses were carried out in positive ion mode with nitrogen as the nebulizing gas. Ion source temperature was 120 °C, and desolvation gas temperature was 350 °C. Nitrogen gas was also used as desolvation gas (700 L/h) and cone gas (85 L/h), and argon was used to provide a collision cell pressure of 1.5 × 10-3 mbar. Positive Page 6 ions were acquired in multiple reaction monitoring mode. Multiple reaction monitoring transitions were monitored, with respective cone voltage and collision energies of 490->374, 35 V, 20 eV, 490->357, 35 V, 50 eV, 490->329, 50 V, 50 eV, 490->250, 50 V, 50 eV. REFERENCES 1. Hashimoto H, Hanaoka T, Kobayashi M, Tsugane S. (2004) Analytical method of 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine in human hair by column-switching liquid chromatography-mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci. 803: 209-13. 2. Kato T, Totsuka Y, Ishino K, et al. (2013) Genotoxicity of multi-walled carbon nanotubes in both in vitro and in vivo assay systems. Nanotoxicology. 7: 452-61. 3. Goodenough AK, Schut HA, Turesky RJ. (2007) Novel LC-ESI/MS/MS(n) method for the characterization and quantification of 2'-deoxyguanosine adducts of the dietary carcinogen 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine by 2-D linear quadrupole ion trap mass spectrometry. Chemical research in toxicology. 20: 263-76.