Wildlife Forensics Pre-Visit Lesson This pre-visit lesson is intended to get your class ready for your visit to the Environmental Study Center and complete DNA Fingerprinting. Students will use gel electrophoresis to determine whether a sample of DNA is from a wild or domesticated chinchilla. Conservation genetics, DNA technology, and restriction enzymes will be the topics of discussion. Lesson Overview: This lesson, or pre-visit activity, is designed to prepare your students with the background knowledge they will need to successfully complete the wildlife forensics program. New York City Science Scope and Sequence Eighth Grade Unit 1: Reproduction, Heredity, and Evolution Unit 4: Humans in their Environment: Needs and Tradeoffs Living Environment Unit 7: Genetics and Biotechnology STANDARDS: Eighth Grade New York State Science Standards Standard 4: The Living Environment LE 2.1a Hereditary information is contained in genes. Genes are composed of DNA that makes up the chromosomes of cells. LE 2.1b Each gene carries single unit information. A single inherited trait of an individual can be determined by one pair or by many pairs of genes. A human cell contains thousands of different genes. LE 7.2 Describe the effects of environmental changes on humans and other populations. LE 7.2b The environment may be altered through the activities of organisms Alterations are sometimes abrupt. Some species may replace others over time, resulting in longterm gradual changes. LE 7.2d Since the Industrial Revolution, human activities have resulted in major pollution of air, water, and soil. Pollution has cumulative ecological effect such as acid rain, global warming, or ozone depletion. The survival of living things on our planet depends on the conservation and protection of Earth’s resources. New York State P-12 Common Core Learning Standards for English Language Arts & Literacy – Science and Technical Subjects Key Ideas and Details RST.6-8.3 Follow precisely a multistep procedure when carrying out experiments, taking measurements, or performing technical tasks. Integration of Knowledge and Ideas 1 – Wildlife Forensics RST.6-8.7 Integrate quantitative information expressed in words in a text with a version of that information expressed visually. STANDARDS: Living Environment New York State Science Standards Standard 4: The Living Environment LE 2.1f In all organisms, the coded instruction for specifying the characteristics of the organism are carried in DNA, a large molecule formed from subunits arranged in a sequence with bases of four kinds (represented A, G, C, and T). LE 2.2c Different enzymes can be used to cut, copy, and move segments of DNA. Characteristics produced by the segments of DNA may be expressed when these segments are inserted into new organisms, such as bacteria. New York State P-12 Common Core Learning Standards for English Language Arts & Literacy – Science and Technical Subjects Key Ideas and Details RST.9-10.3 Follow precisely a complex multistep procedure when carrying out experiments, taking measurements, or performing technical tasks, attending to special cases or exceptions defined in the text. Integration of Knowledge and Ideas RST.9-10.7 Translate quantitative or technical information in words in a text into visual from and translate information expressed visually or mathematically into words. Objective: Students will learn (or review) vocabulary required to complete DNA Fingerprinting at the ESC Materials: all material links are available on the ESC Website DNA Fingerprinting Flashcards DNA Fingerprinting Matching Worksheet DNA Fingerprinting Crossword DNA Fingerprinting Quiz 1 DNA Fingerprinting Quiz 2 Vocabulary: Term Definition DNA A complex molecule containing the genetic information that makes up the chromosomes. DNA Replication Process in which chromosomal DNA is copied before mitosis or 2 – Wildlife Forensics meiosis. Double Helix The shape of a DNA molecule formed when two twisted DNA strands are coiled into a spring like structure and held together by hydrogen bonds between the complimentary base pairs. Transcription Process in the cell nucleus where enzymes make a RNA copy of a DNA strand. Translation Process of converting information in mRNA into a sequence of amino acids in a protein. RNA A single strand of nucleotides consisting of adenine, cytosine, guanine, and uracil (replacing thymine) present in all living cells that plays a role in protein synthesis. Enzyme Any of several complex proteins that are produced by cells and act as catalysts in specific biochemical reactions. Adenine A purine base found in DNA and RNA, pairs with thymine in DNA, uracil in RNA. Thymine A pyrimidine base found in DNA, pairs with adenine. Cytosine A base found in DNA and RNA and derived from a pyrimidine, pairs with guanine. Guanine A purine base found in DNA and RNA, pairs with cytosine. Pyrimidine Has one carbon-nitrogen ring, thymine and cytosine are examples. Purine Has two carbon-nitrogen rings. adenine and guanine are examples Chromosomes A threadlike structure of nucleic acids and protein found in the nucleus of most living cells, carrying genetic information in the form of genes. Complimentary Strands Two single strands of DNA in which the nucleotide sequence is such that they will bind as a result of base pairing throughout their full length. Lesson Duration: 10-30 minutes Background Knowledge: 3 – Wildlife Forensics Students should have a working knowledge of DNA. We expect students to be familiar enough with DNA to know that it organized into chromosomes found in the nucleus of eukaryotic cells. Whether the organism is a bacterium, fungus, plant, or animal there is DNA in the organism’s cells. Each cell contains the same DNA. In sexually reproducing organisms each parent contributes a copy of half its DNA creating offspring with a unique DNA sequence. Although most of the DNA sequence is highly conserved among each level of classification, there are random point mutations that lead to various sections of DNA completely unique to each individual. DNA is built as a double stranded helix made up of four nitrogen bases: adenine, cytosine, guanine, and thymine. The strands are complimentary meaning adenine, a purine, always pairs with thymine, a pyrimidine. Likewise, guanine, also a purine, always pairs with cytosine, also a pyrimidine. These complimentary strands are ideal for DNA replication. Through molecular biology and technology available to scientists, small amounts, even traces of DNA can be amplified (copied) with PCR and sequenced to determine the unique sequence of A, G, T, and C’s. By using enzymes to cut out specific section of the DNA sequence, scientists can identify a specific species through DNA barcoding or comparing strands of DNA through DNA fingerprinting, scientists can analyze DNA and use the data to solve crimes, fraud, and identify new species. Internet Resources: DNA basics - http://www.dnaftb.org/ - organization Review using topic specific flashcards - http://www.studystack.com/flashcard1300452 Build a model of DNA with candy to observe the structure of DNA, complimentary base pairs, and DNA replication. http://www.teachengineering.org/view_activity.php?url=collection/cub_/activities/cub _biomed/cub_biomed_lesson09_activity2.xml Build a paper model of DNA. http://www.gov.mb.ca/conservation/sustain/dnadone.pdf Virtual transcription/translation interactive http://learn.genetics.utah.edu/content/begin/dna/transcribe/ Paper transcription/translation activity http://biologycorner.com/worksheets/transcription_translation_coloring.html#.Uhe24n CJlkg Procedure: Give students the DNA Fingerprinting Quiz as a pre-assessment of students’ working knowledge of DNA vocabulary. Review the answers with students (1 – C, 2 – C, 3 – A, 4 – D, 5 – B, 6 – A, 7 – C, 8 – B, 9 – D, 10 – C, 11 – D, 12 – C, 13 – C, 14 – D, 15 – D). If most students are competent and comfortable with the vocabulary direct students to use the flashcard website (http://www.studystack.com/flashcard-1300452) either in class, school, or at home. This study stack was created by the ESC and provides virtual flashcards and games for students to review the vocabulary needed for DNA fingerprinting at the center. 4 – Wildlife Forensics If most students are struggling with the vocabulary, consider teaching a lesson on DNA structure and/or transcription & translation to strengthen student knowledge. There are several links listed above to direct you to meet your students’ needs. Use the DNA flashcards for students to quiz themselves and each other. Use the crossword or matching worksheet for homework or further review and study. Have students complete DNA Fingerprinting Test as a post assessment to double check students’ learning. Go over the answers to the test with your students (1 – C, 2 – A, 3 – D, 4 – E, 5 – B, 6 – F, 7 – G, 8 – complimentary pair, 9 – DNA replication, 10 – chromosome, 11 – double helix, 12 – purine, 13 – thymine, 14 – transcription, 15 – translation). Information about your Field Trip 5 – Wildlife Forensics