Table S1. Animal models of CCM Gene Organism Details heart of glass (HEG1) Zebrafish mutant allele/ morpholino heart of glass (HEG1) Zebrafish santa (KRIT1) Phenotype Reference Embryonic lethal with massively dilated hearts unable to circulate blood. Only a single cell layer in the myocardial wall, normal myocardial and endocardial cell number. (Mably et al., 2003) morpholino Dilated heart chambers but normal vessel patterning. Blocked circulation due to a failure in vessel lumen formation. (Kleaveland et al., 2009) Zebrafish morpholino Embryonic lethal with massively dilated hearts unable to circulate blood. Only a single cell layer in the myocardial wall, normal myocardial and endocardial cell number. (Mably et al., 2006) santa (KRIT1) Zebrafish mutant allele Normal vascular patterning but vascular morphogenesis defects, failed circulation initiation, dilation of major vessels and heart. Normal cell number and cell-cell junctions, progressive dilation due to cell spreading. (Hogan et al., 2008) rap1b; santa (RAP1B; KRIT1) valentine (CCM2) Zebrafish morpholino Co-injection of low doses of santa and rap1b morpholinos led to synergistic enhancement of the dilated heart phenotype (Gore et al., 2008) Zebrafish mutant allele/ morpholino Embryonic lethal with massively dilated hearts unable to circulate blood. Only a single cell layer in the myocardial wall, normal myocardial and endocardial cell number. (Mably et al., 2006) valentine (CCM2) Zebrafish mutant allele/ morpholino Normal vascular patterning but vascular morphogenesis defects, failed circulation initiation, dilation of major vessels and heart. Normal cell number and cell-cell junctions, progressive dilation due to cell spreading. (Hogan et al., 2008) valentine (CCM2) Zebrafish morpholino Dilated heart chambers but normal vessel patterning. Blocked circulation due to a failure in vessel lumen formation. (Kleaveland et al., 2009) santa/ valentine; heart of glass (KRIT1/ CCM2; HEG1) santa; valentine (KRIT1; CCM2) Zebrafish comorpholino Non-phenotypic doses of santa or valentine morpholinos co-injected with non-phenotypic doses of heart of glass morpholinos leads to dilated heart phenotype. (Mably et al., 2006) Zebrafish double mutant Phenotype is identical to single mutants. Normal vascular patterning but vascular morphogenesis defects. Failed circulation initiation and severe and progressive dilation of (Hogan et al., 2008) major vessels and heart. ccm3a/b (PDCD10) Zebrafish mutant allele/ morpholino Progressive dilation of major vessels and heart. Indistinguishable from santa and valentine phenotypes. (Voss et al., 2009) ccm3a/b (PDCD10) Zebrafish morpholino Embryonic lethal from dilated heart phenotype, thin myocardium and blocked circulation. (Zheng et al., 2010) ccm3a/b (PDCD10) Zebrafish morpholino Gross dilation and mispatterning of cranial vessels, mostly not lumenized. Lack of circulation and pericardial edema, but no dilated heart. Normal endothelial cell numbers but increases in cell membrane protrusion number and size. (Yoruk et al., 2012) stk25a (STK25) Zebrafish morpholino Misconnections in cranial vasculature. (Yoruk et al., 2012) stk25b (STK25) Zebrafish morpholino Enlarged cranial vasculature. Pericardial and venous plexus edemas, no enlarged heart and normal blood circulation. (Yoruk et al., 2012) stk24; stk25a/b (STK24; STK25) ccm3a/b; stk24/ stk25a/b (PDCD10, STK24; STK25) ccm3a/b; stk25a/b (PDCD10; STK25) valentine; ccm3a/b (CCM2; PDCD10) ccm2l (CCM2L) Zebrafish comorpholino Morpholinos for stk24, stk25a and stk25b all co-injected led to the dilated heart phenotype. (Zheng et al., 2010) Zebrafish comorpholino Morpholino targeting ccm3a/b co-injected with either stk24, stk25a or stk25b morpholinos led to the dilated heart phenotype. (Zheng et al., 2010) Zebrafish comorpholino Non-phenotypic doses of ccm3 morpholinos co-injected with either stk25a or stk25b synergized to lead to cranial dilations. (Yoruk et al., 2012) Zebrafish morpholino Non-phenotypic doses of ccm3 morpholinos injected into valentine heterozygote led to cranial vasculature defects more severe than the complete loss of ccm3. (Yoruk et al., 2012) Zebrafish morpholino Dilation of atrium and inflow tract; occasional cessation of blood circulation. SIVs have unusual growth patterns, some ISVs fail to lumenize, likely due to reduced blood circulation. (Rosen et al., 2013) Pdcd10 (PDCD10) Drosophila dsRNA Tracheal tubes branch normally, but fail to lumenize. (Chan et al., 2011) Wheezy (GCKIII) Drosophila dsRNA Tracheal tubes branch normally, but fail to lumenize. (Chan et al., 2011) Ccm1 Mouse Global Failed lumen in first branchial arch artery and abnormal (Whitehead (KRIT1) Knockout yolk sac vascular remodeling leading to failed circulation at E8.5-E9.5 et al., 2004) Ccm1+/(KRIT1) Mouse Heterozygous Increased basal vascular leak in brain and lungs, increased LPS-induced leaks in brain and pulmonary vessels. (Stockton et al., 2010) Ccm1 (KRIT1) Mouse Endothelial Inducible Knockout; Cdh5-CreERT2 Induced of Cre at P3 led to CCM-like lesions in the cerebellum associated with EndMT-like traits at P13. (Maddaluno et al., 2013) Ccm1+/-; p53+/(KRIT1, P53) Ccm1+/-; Msh2-/(KRIT1; MSH2) Ccm2+/(CCM2) Mouse Sensitized Heterozygous ~55% mice had CCM-like vascular lesions (Plummer et al., 2004) Mouse Sensitized Heterozygous ~50% of mice had CCM-like lesions. (McDonald et al., 2011) Mouse Heterozygous Very low rate of brain vascular malformations. (Plummer et al., 2006) Ccm2+/(CCM2) Mouse Heterozygous Increased basal vascular leak in brain and lungs, increased LPS-induced leaks in brain and pulmonary vessels. (Stockton et al., 2010) Ccm2+/(CCM2) Mouse Gene Trap Heterozygous, Endothelial Heterozygous No overt phenotype, increased vascular permeability to Evans blue after VEGF treatment. (Whitehead et al., 2009), Ccm2 (CCM2) Mouse Global Knockout Embryonic lethal by E10.5. No phenotypic difference at E8.5, but pale yolk sacs and pericardial edema at E9.5. (Boulday et al., 2009) Ccm2 (CCM2) Mouse Global Knockout; HPRT-Cre Normal vasculogenesis/patterning and heart development at E8.0. Failed lumen in first branchial arch artery and abnormal yolk sac vascular remodeling leading to failed circulation at E8.5-E9.5; dead by E10. (Whitehead et al., 2009) Ccm2 (CCM2) Mouse Global Knockout No remodeled vessels within yolk sac at E9.5; angiogenic arrest during cardiovascular development. Does not recruit vascular smooth muscle cells. No aortic lumen. Defective heart morphogenesis. (Cunningham et al., 2011) Ccm2 (CCM2) Mouse Neural Knockout; Nestin-Cre No overt phenotype (Boulday et al., 2009) Ccm2 (CCM2) Mouse Neural Knockout; No overt phenotype (Whitehead Nestin-Cre et al., 2009) Ccm2 (CCM2) Mouse Neural Knockout; Nestin-Cre No overt phenotype. (Chan et al., 2011) Ccm2 (CCM2) Mouse Smooth Muscle Knockout; Transgelin-Cre No overt phenotype (Whitehead et al., 2009) Ccm2 (CCM2) Mouse Endothelial Knockout; Tie2-Cre Embryonic lethal by E11.5. Pericardial edema at E10.5 with signs of hemorrhage in pericardial cavity and trunk. Normal vasculogenesis but impaired angiogenesis and impaired recruitment of vascular smooth muscle cells. (Boulday et al., 2009) Ccm2 (CCM2) Mouse Endothelial Knockout; Tie2-Cre Normal vasculogenesis/patterning and heart development at E8.0. Failed lumen in first branchial arch artery and abnormal yolk sac vascular remodeling leading to failed circulation at E8.5-E9.5; dead by E10. (Whitehead et al., 2009) Ccm2 (CCM2) Mouse Endothelial Inducible Knockout; Cdh5-CreERT2 Induction of Cre at P1- 100% of mice have CCM-like lesions in the cerebellum and retina by P8. Induction of Cre at P21no lesions at 2 months. (Boulday et al., 2011) Ccm2 (CCM2) Mouse Endothelial Knockout; Tie2-Cre No remodeled vessels within yolk sac at E9.5; angiogenic arrest during cardiovascular development. Does not recruit vascular smooth muscle cells. No aortic lumen. Defective heart morphogenesis. (Cunningham et al., 2011) Ccm2 (CCM2) Mouse Inducible Knockout; PDGFb-iCreER Induction at P1 expresses Cre throughout the brain vasculature. CCM-like lesions no earlier than 2-months of age. Fully penetrant at 6-months. (Chan et al., 2011) Ccm2 (CCM2) Mouse Inducible Knockout Mx1-Cre Induction of Cre in 6-8 week old mice in mainly endothelial cells. Hemorrhages throughout the brain (cerebrum and cerebellum at 7-8 months. Lesions dilated vessels with impaired and disrupted endothelial lumen structure with microglia recruitment. (Cunningham et al., 2011) Ccm2+/-; Msh2-/(CCM2, MSH2) Ccm2L (CCM2L) Mouse Sensitized Heterozygous No overt phenotype. No detectable CCM-like lesions. (McDonald et al., 2011) Mouse Global Knockout No overt phenotype (Zheng et al., 2012) Heg1 (HEG1) Mouse Global Knockout Embryonic and postnatal lethal due to defective cardiac integrity and pulmonary hemorrhage. Defective lymphatic vessel integrity. (Kleaveland et al., 2009) Heg1-/-; Ccm2+/(HEG1; CCM2) Ccm3 (PDCD10) Mouse Heterozygous Died before E10.0. Pericardial edema and aberrant formation of a dilated aortic sac. No blood circulation due to a failure of the endothelial cells to lumenize. (Kleaveland et al., 2009) Mouse Global Knockout Embryonic lethal by E8.5, no visible blood cell-filled vessels in yolk sac, thinner myocardia and smaller ventricular chambers. (He et al., 2010) Ccm3 (PDCD10) Mouse Global Knockout Embryonic lethal E 8.0 (prior to the requirement for cardiovascular function) (Chan et al., 2011) Ccm3 (PDCD10) Mouse Glial cell Knockout; Emx1-Cre Survived to adulthood, had enlarged brains due to a progressive increase in reactive astrocytes. Formation of CCM-like lesions after 7 months. (Louvi et al., 2011) Ccm3 (PDCD10) Mouse Glial cell Knockout; Mortality rate of ~80% at age 4-weeks. Enlarged brains with dilated ventricles and decreased vessel density. Formation of superficial CCM-like lesions after 3-weeks. (Louvi et al., 2011) Gfap-Cre Ccm3 (PDCD10) Mouse Neural Cell Knockout; Nestin-Cre Viable with normal retinal vasculature. (He et al., 2010) Ccm3 (PDCD10) Mouse Neural Cell Knockout; Nestin-Cre No overt phenotype. (Chan et al., 2011) Ccm3 (PDCD10) Mouse Neural Cell Knockout; Nestin-Cre Did not survive past postnatal day 3, enlarged brain with abnormal cytoarchitecture. (Louvi et al., 2011) Ccm3 (PDCD10) Mouse Endothelial Knockout; Tie2-Cre Embryonic lethal by E10.5. Fails to remodel vasculature at E8.5 and has decreased vascular density. Defects in VEGFR2 signaling and thus defective hematopoiesis. Dilated and disrupted dorsal aorta and cardinal vein, with reduced & disrupted cell-cell junctions. (He et al., 2010) Ccm3 (PDCD10) Mouse Endothelial Knockout; Tie2-Cre Indistinguishable from littermates at E9.5. Progressive enlargement of the cardinal vein, rupture/death by E13.5. (Chan et al., 2011) Ccm3 (PDCD10) Mouse Smooth Muscle Knockout; Viable with normal retinal vasculature. (He et al., 2010) SM22α-Cre Ccm3 (PDCD10) Mouse Inducible Knockout; PDGFb-iCreER Induction at P1 expresses Cre throughout the brain vasculature. CCM-like lesions at 1-month of age (fully penetrant). (Chan et al., 2011) The role of CCM proteins and their binding partners in development. The loss of CCM genes (KRIT1, CCM2 and PDCD10) is associated with defects in vascular development and angiogenesis, as well as the formation of vascular lesions. As each of the CCM genes is required for development, rescue models in zebrafish and conditional/inducible knockout studies in mice have been paramount for gathering information. This table describes the phenotypes associated with the loss of CCM genes in zebrafish, fruit-flies and mice. Animal model information for CCM protein binding partners was only included if the phenotype overlapped with or helped to inform the CCM-model. The human homolog is parenthetically noted after each gene reference.