Appendix S1. Values, sensitivity ranges, and literature sources for all parameters (excluding environmental input variables) in our mechanistic model. Model Parameter Symbol Unit Used Value Range* Sources McIntire (1973); Uehlinger, Bührer & Reichert (1996); Rutherford, Scarsbrook & Broekhuizen (2000); Boulêtreau et al. (2006); Fovet et al. (2010); Schuwirth, Acuña & Reichert (2011) McIntire (1973); Rutherford et al. (2000); Boulêtreau et al. (2006); Schuwirth et al. (2011) Chapra (1997); Abdul-Aziz, Wilson & Gulliver (2010) Periphyton growth and mortality Maximum periphyton growth rate gmax d-1 1.1 0.5 - 5.5 Periphyton biomass at half saturation kb g AFDM 6 1 - 30 Temperature coefficient θ -- 1.066 1.053 - 1.080 PAR at half saturation kpar mol m-2 d-1 5 1-9 N at half saturation kn mg L-1 0.02 0.01 - 0.07 Jorgensen, Nielsen & Jorgensen (1991); Chapra (1997); Rutherford et al. (2000) P at half saturation kp mg L-1 0.005 0.001 - 0.010 Jorgensen et al. (1991); Chapra (1997); Rutherford et al. (2000) Respiration rate at 20 oC rref o C 0.035 0.02 - 0.05 Hamilton & Schladow (1997); Rutherford et al. (2000) Respiration coefficient θ2 -- 1.08 1.05 – 1.11 Chapra (1997); Abdul-Aziz et al. (2010) Detachment coefficient cdet -- 0.019 0.003 - 0.035 Biomass of periphyton resistant to detachment B0 g AFDM 0.001 -- Physical habitat Uehlinger et al. (1996); Hill, Fanta & Roberts (2009) Labiod, Godillot & Caussade (2007); Fovet et al. (2010) Uehlinger et al. (1996); Boulêtreau et al. 2006; Abdul-Aziz et al. (2010) Water density ρw kg m-3 1000 -- Substratum density ρs kg m-3 2.65 -- Henderson (1966) Shields number τ* -- 0.045 -- Henderson (1966) Dissolved N from live salmon Nexcret mg g-1 d-1 0.161 0.092 - 0.593 Wood (1995); Post & Walters (2009) Dissolved P from live salmon SRPexcret mg g-1 d-1 0.032 0.018 - 0.052 Wood (1995); Post & Walters (2009) Nleach mg g-1 d-1 0.016 0.009 - 0.059 Assumed value (1/10th of excretion value) SRPleach mg g-1 d-1 0.003 0.002 - 0.005 Assumed value (1/10th of excretion value) Temperature dependent decay rate rdecay d-1 1 0.8 - 1.2 Redd area (m2) Aredd m2 4.5 -- Salmon Dissolved N from salmon carcass Dissolved P from salmon carcass Chidami & Amyot (2008) Healey (1991) *represents the range (minimum to maximum) of values used in the global sensitivity analysis (GSA) References Abdul-Aziz O.I., Wilson B.N. & Gulliver J.S. (2010) Two-zone model for stream and river ecosystems. Hydrobiologia 638, 85–107. Boulêtreau S., Garabétian F., Sauvage S. & Sánchez-Pérez J. (2006) Assessing the importance of a self-generated detachment process in river biofilm models. Freshwater Biology 51, 901–912. Chapra S.C. (1997) Surface Water-Quality Modeling. WCB/McGraw-Hill, New York, U.S.A. Chidami S. & Amyot M. (2008) Fish decomposition in boreal lakes and biogeochemical implications. Limnology and Oceanography 53, 1988–1996. Fovet O., Belaud G., Litrico X., Charpentier S., Bertrand C., Dauta A., et al. (2010) Modelling periphyton in irrigation canals. Ecological Modelling 221, 1153–1161. Hamilton D.P. & Schladow S.G. (1997) Prediction of water quality in lakes and reservoirs. Ecological Modelling 96, 91–110. Healey M.C. (1991) Life history of Chinook salmon. In: Pacific Salmon Life Histories. (Eds C. Groot & L. Margolis), University of British Columbia Press, Vancouver, British Columbia. Henderson F.M. (1966) Open Channel Flow. Macmillan Publishing Co. Inc., New York, U.S.A. Hill W.R., Fanta S.E. & Roberts B.J. (2009) Quantifying phosphorus and light effects in stream algae. Limnology and Oceanography 54, 368–380. Jorgensen S.E., Nielsen S.N. & Jorgensen L.A. (1991) Handbook of Ecological Parameters and Ecotoxicology. Elsevier, New York, USA. Labiod C., Godillot R. & Caussade B. (2007) The relationship between stream periphyton dynamics and near-bed turbulence in rough open-channel flow. Ecological Modelling 209, 78–96. McIntire C.D. (1973) Periphyton dynamics in laboratory streams: a simulation model and its implictions. Ecological Monographs 43, 399–420. Post D.M. & Walters A.W. (2009) Nutrient excretion rates of anadromous alewives during their spawning migration. Transactions of the American Fisheries Society 138, 264–268. Rutherford J.C., Scarsbrook M.R. & Broekhuizen N. (2000) Grazer control of stream algae: modeling temperature and flood effects. Journal of Environmental Engineering 126, 331–339. Schuwirth N., Acuña V. & Reichert P. (2011) Development of a mechanistic model (ERIMO-I) for analyzing the temporal dynamics of the benthic community of an intermittent Mediterranean stream. Ecological Modelling 222, 91–104. Uehlinger U., Bührer H. & Reichert P. (1996) Periphyton dynamics in a floodprone prealpine river: evaluation of significant processes by modelling. Freshwater Biology 36, 249–263. Wood C.M. (1995) Excretion. In: Physiological Ecology of Pacific Salmon. (Eds C. Groot, L. Margolis & W.C. Clarke), pp. 381–438. University of British Columbia Press, Vancouver, British Columbia.