Ch. 27- Bacteria & Archaea Guided Notes Warm Up Questions: 1. What was Frederick Griffith’s contribution to our understanding of DNA? (Refer back to Ch. 16) 2. How do bacteria replicate? What you need to know: Mechanisms that contribute to genetic diversity in prokaryotes, including transformation, conjugation, transduction, and mutation. 1. Genetic Diversity in Prokaryotes Factors: 1. Rapid reproduction (binary fission) 2. Mutations – errors in replication 3. Genetic recombination 2. Genetic Recombination in Bacteria Transformation: uptake of foreign DNA from surroundings Transduction: viruses transfer genes between prokaryotes Conjugation: DNA transferred from one to another 3. Transformation Uptake of foreign DNA from surroundings Observed by Griffith (bacteria & mice) 4. Transduction Viruses (bacteriophages) carry bacterial genes from one host cell to another Recombine DNA of donor and recipient cell 5. Conjugation One cell donates DNA to another Donors cell extends a sex pilus (“mating bridge”) through which DNA is transferred Requires the presence of a piece of DNA called the F factor to produce the pilus 6. Plasmids Small ring of DNA that carries a few genes Replicates separately from bacterial chromosome Can carry genes for antibiotic resistance Used frequently in genetic engineering for gene cloning In this section you will continue your exploration of the genomes of bacteria. Click on the links listed below to watch the animations and make annotations in your notes. After each animation there are several quiz questions to check your understanding. It is your responsibility to understand this information! Bacterial Genome: What is the main component of most bacterial genomes? How is the DNA arranged in the nucleoid region of the bacterial genome? What is a plasmid? Describe the process of binary fission. -Double stranded, circular DNA with small amount of associated protein -Certain proteins cause chromosomes to tightly coil and supercoil densely packing into nucleoid region -Smaller circles of DNA separate from cells large circular DNA -Asexual process -Replication at origin of replication, enzymes split circular chromosome. -Enzymes reassemble to form new DNA -Cell splits into two new cells http://glencoe.mcgraw-hill.com/sites/9834092339/student_view0/chapter10/animation_-_cell_division.html Importance of Mutations: Why do mutations make such a large contribution to bacterial genetic variation as compared to humans? What is the process of alteration of a bacterial cell’s genotype by the uptake of naked, foreign DNA from the surrounding environment? What famous experiment in the previous unit described this process? What is transduction? List the generalized steps of transduction. -Bacteria reproduce so quickly that it quickly increases genetic diversity compared to humans slow rate of reproduction -Genetic recombination (exchange of DNA segments by crossing over) caused by transformation 1. When harmless bacteria takes up a piece of DNA from a disease causing bacteria that has broken open. 2. Incorporates DNA of pathogenic bacteria into its own harmless DNA 3. Causing the harmless bacteria to turn pathogenic because it can now create a protein coat protecting it from your body’s immune system http://highered.mcgrawhill.com/sites/0072556781/student_view0/chapter13/animation_quiz_1.html -Griffith with his experiment of harmless/ harmful bacteria on mice -When phages carry bacterial DNA from one host cell to another bacterial cell 1. Phage infects bacterial cell 2. Host DNA fragmented and phage DNA and proteins made 3. Bacterial DNA fragments get encased in phages capsid 4. Phage infects other bacteria—DNA of both bacteria cross over resulting in genetic recombination http://highered.mcgrawhill.com/sites/0072556781/student_view0/chapter13/animation_quiz_2.html What is the process of direct transfer of genetic material between two bacterial cells that are temporarily joined? Conjugation 1. Dna to be transferred is cut by enzyme relaxosome at the origin of transfer on the plasmid 2. Cut T DNA is pumped through pili to the other bacterial cell 3. Once in recipient cell will be replicated to become double stranded 4. Pili released and now both cells are F+ cells http://glencoe.mcgrawhill.com/sites/9834092339/student_view0/chapter28/bacterial_conjugation.html What structure joins them? Sex pili- brings the bacterial cells closer together What generally must be Cytoplasmic mating bridge—Need a piece of DNA called the f-factor (fertility present for the sex pili to factor) donate DNA during F+ = contains f-factor and will produce sex pili (donor) conjugation? F- = contains no f-factor and will not produce sex pili (recipient) What are plasmids? -small circular, self replicating DNA molecule that separates from the bacterial chromosome (DNA) -Not required for the survival or reproduction under normal conditions -Advantages- help bacteria living in stressful conditions -Example: F plamid facilitates genetic recombination—which helps during unfavorable conditions in changing environment What is special about the F Contains f-factor and plasmid—create sex pili plasmid? Donor cell during conjugation What is an episome? -A genetic element that can replicate either as part of the bacterial chromosome or independently -Plasmids and temperate viruses qualify as episomes What are R plasmids and -R plasmids are bacteria that carry genes that are antibiotic resistance why are they problematic to -Antibiotics are used to kill bacteria in humans humans? How does this relate to -R plasmids shows that organisms will adapt to their environment. The R plasmids natural selection? have learned how to avoid being killed by antibiotics making them more fit for survival. What are transposable -DNA of a single cell can also undergo recombination elements? -Transposable genes exist independently—not part of chromosome or plasmid DNA -Transposase is the enzyme that removes the transposable element from one bacterial DNA and splices it into another bacterial DNA -Common name is Jumping Genes -Allows bacteria to adapt to new environments—resistance to antibiotics http://highered.mcgrawhill.com/sites/dl/free/0072835125/126997/animation36.html