BCLN BIOLOGY 12 – Rev July 2014 Unit 5 ~ Learning Guide Name:________________ INSTRUCTIONS Complete the following notes and questions as you work through the related lessons. You are required to have this package completed BEFORE you write your unit test. Do your best and ask questions about anything that you don't understand BEFORE you write the unit test. U5L1 NOTES: INTRODUCTION (web notes and video) YOU SHOULD WATCH THE DNA LAB VIDEO BEFORE PROCEEDING ANY FURTHER! Background Information The acronym DNA stands for ____________________ ______________________. DNA is the molecule that makes up ______________________ and serves as __________________________________________. Nucleic Acids There are two types of nucleic acids, __________ and _____________. Remember what you learned in Unit 2 both DNA and RNA are __________________ of _______________________ (i.e., ________________ _______________________________). They form genetic material and are involved in the functioning of _____________________________________________. U5L2 NOTES: DNA (web notes and video) YOU SHOULD WATCH THE DNA STRUCTURE VIDEO BEFORE PROCEEDING ANY FURTHER! Page 1 of 10 BCLN BIOLOGY 12 – Rev July 2014 Structure The shape of DNA is referred to as a _______________________ made up of repeating ___________________________. Nucleotides are composed of______ key parts: i) _______________________________________ ii) _______________________________________ iii) ______________________________________: 1. _______________: _____________ ring (**larger base than Pyrimidines**) 2. ____________________:___________ ring When the bases bond together they form the "rungs" of the DNA ladder and do so in a set pattern. The alternating sugar and phosphates make up the rails (_____________). The bases make up the ______________. Adenine always bonds to _______________ (_______________________________) Guanine always bonds to _______________ (_______________________________) This bonding of bases is called __________________________________________. Page 2 of 10 BCLN BIOLOGY 12 – Rev July 2014 The bases cannot bond any other way because 2 purines would overlap and 2 pyrimidines would be too short to form the rungs of the ladder. The double strand is held in place by hydrogen bonds between the bases. It is the _____________________ ____________________________________________________ that determine what kind of organism will develop. Example: ATCCGATT means something entirely different than ACCGTTAT, just as the words Hate and Heat mean different things even though they contain the same letters. As a DNA strand lengthens, ______________________. it twists into a double spiral called a Functions of DNA 1. ________________________________________________________________ ________________________________________________________________ ________________________________________________________________. 2. ________________________________________________________________ ________________________________________________________________ ________________________________________________________________ ________________________________________________________________. 3. ________________________________________________________________ ________________________________________________________________ ________________________________________________________________. Steps in DNA Replication 1. The DNA molecule becomes untwisted by enzymes breaking the bonds. The two strands that make up DNA become unzipped and each side acts as a template. **Important** The weak hydrogen bonds between the nitrogenous base pairs are broken by __________________________________________. 2. New complementary nucleotides, always present in the nucleus, move into place and pair with complementary bases on the exposed strands. **Important** The enzyme ____________________ assists with the complementary base pairing. Remember: T always pairs with A C always pairs with G Page 3 of 10 BCLN BIOLOGY 12 – Rev July 2014 3. The adjacent nucleotides, through their sugar-phosphate components become joined together along the newly forming chain. **Important** The enzyme ________________ glues the alternating sugar phosphate backbone together. 4. When the process is finished, 2 complete DNA molecules are present, identical to each other and to the original molecule. 5. Both new DNA strands will now wind back up into their helical shape. DNA replication is called _____________________________ because each new double helix is composed of an old (parental) strand and a new (daughter) strand. Enzymes assist the unwinding process, join together the nucleotides, and assist the rewinding process and many others. When errors are made in replication a ________________________ can arise. Recombinant DNA Definition: __________________________________ __________________________________________ __________________________________________ __________________________________________ __________________________________________ __________________________________________ A _______________ is used to introduce recombinant DNA. A _________________ is the most common vector (they are small rings of DNA found in bacteria). The plasmid has to be removed from the bacteria and has to have ___________________________________________________________. An enzyme (restriction enzyme) breaks the plasmid DNA. The new foreign DNA can now be attached to the plasmid. The enzyme, ligase, acts like the glue and sticks the foreign DNA to the plasmid and makes it whole again. The plasmid DNA is then ________________________________________. This bacteria will now replicate every cell the same as the one you just put in. Eventually there are _____________________________________________________________. _________________________ can also be used as a vector to carry recombinant DNA into a cell. When a virus containing Recombinant DNA infects a cell, the viral DNA enters. Here it can direct the reproduction of many more viruses. Each virus derived from a viral vector contains a copy of the foreign gene, therefore viral vectors allows _____________________________________________________________________. Viral vectors are also used to create _____________________________. A Genomic Page 4 of 10 BCLN BIOLOGY 12 – Rev July 2014 Library is a collection of engineered viruses that carry all the genes of a species. It takes about 10 million viruses to carry all the genes of a mouse. Summary of Recombinant DNA Segments of DNA (particular genes) can be inserted into bacteria and the bacteria will go on its merry way and produce these genes. If desired genes are used - like those that produce certain chemicals (vaccines, antibodies, etc.) then these proteins become much more available. Protein hormones like insulin can be made using yeast cells. ____________________, a protein used in cancer treatments to help the immune system is now ________________________________________________________. Uses of Recombinant DNA 1. ________________________________________________________________ ________________________________________________________________. 2. Identify specific genes. In 1998, the genes that mutates the cause prostate cancer was identified. 3. ________________________________________________________________. 4. Insert genetic material into chromosomes that will help regulate cell function to make organism genetically "better". DNA versus RNA Both are nucleic acids made up of ______________________. Page 5 of 10 BCLN BIOLOGY 12 – Rev July 2014 U5L1 AND U5L2 PRACTICE: INTRODUCTION AND DNA 1. DNA and RNA are nucleic acids which are really just polymers (chains of) ____________________________ monomers. (1 mark) 2. What are the three key parts of any nucleotide? (3 marks) a. ________________________________________________ b. ________________________________________________ c. ________________________________________________ 3. In DNA, a G always pairs with a _____ whereas an A always pairs with a _____. (2 marks) 4. Please write the complimentary sequence for the following strand of DNA (2 marks): T A C G A C T T T C G C A G C __ __ __ __ __ __ __ __ __ __ __ __ __ __ __ 5. If a DNA strand contains 34% adenine bases then it must also contain (3 marks): a. __________ % thymine bases b. __________ % guanine bases c. __________ % cytosine bases 6. DNA replication ideally results in the formation of two identical daughter strands of DNA. Why is it necessary for a cell to perform DNA replication? (2 marks) Page 6 of 10 BCLN BIOLOGY 12 – Rev July 2014 7. DNA replication is termed ________________________________ as it ideally results in two identical double helices that each contain one original "parent strand" and one brand new, complimentary "daughter" strand. (1 mark) 8. Describe the three key steps of DNA replication in your own words. Include what occurs, where in the cell it occurs and any enzymes that are involved for each step. (6 marks) Page 7 of 10 BCLN BIOLOGY 12 – Rev July 2014 9. Please complete the following chart that compares and contrasts DNA and RNA molecules. Use the terms listed below to fill in the blanks. (8 marks) nucleus and cytoplasm nucleus only one two single stand double helix smaller molecule larger molecule ribose deoxyribose A, G, C, T A, G, C, U DNA mRNA, tRNA, rRNA DNA only controls cell activities protein synthesis RNA Location in cell Number of strands Shape of molecule Size of molecule Sugar found in molecule Nitrogenous bases Types Function PLEASE REMEMBER: YOU MUST PERFORM AND SUBMIT THE DNA LAB BEFORE THIS UNIT IS COMPLETE! REFER TO THE UNIT 5 DROP-DOWN MENU TO ACCESS THE LAB GUIDE AND LAB. ~ END OF BIOLOGY 12 UNIT 5 LEARNING GUIDE ~ Page 8 of 10 BCLN BIOLOGY 12 – Rev July 2014 UNIT 5 ANSWER KEY U5L1 AND U5L2 PRACTICE: INTRODUCTION AND DNA 1. DNA and RNA are nucleic acids which are really just polymers (chains of) ____________________________ monomers. (1 mark) 2. What are the three key parts of any nucleotide? (3 marks) a. ________________________________________________ b. ________________________________________________ c. ________________________________________________ 3. In DNA, a G always pairs with a _____ whereas an A always pairs with a _____. (2 marks) 4. Please write the complimentary sequence for the following strand of DNA (2 marks): T A C G A C T T T C G C A G C __ __ __ __ __ __ __ __ __ __ __ __ __ __ __ 5. If a DNA strand contains 34% adenine bases then it must also contain (3 marks): a. __________ % thymine bases b. __________ % guanine bases c. __________ % cytosine bases 6. DNA replication ideally results in the formation of two identical daughter strands of DNA. Why is it necessary for a cell to perform DNA replication? (2 marks) = need two identical copies of each chromosome so that when the cell divides each daughter cell can receive a copy and thus, have all the genetic information to function properly 7. DNA replication is termed ________________________________ as it ideally results in two identical double helices that each contain one original "parent strand" and one brand new, complimentary "daughter" strand. (1 mark) Page 9 of 10 BCLN BIOLOGY 12 – Rev July 2014 8. Describe the three key steps of DNA replication in your own words. Include what occurs, where in the cell it occurs and any enzymes that are involved for each step. (6 marks) Step 1. = the enzyme helicase separates the complimentary strands of the double helix by breaking the hydrogen bonds between complimentary base pairs…this forms two separate template 9aka parent) strands that can be used to build new complimentary strands Step 2. = the enzyme DNA Polymerase helps bring in base pairs that are complimentary to the parental strands Step. 3. = the enzyme ligase works with DNA polymerase to bond the successive bases together to form complimentary daughter strand to the parental strand thus, forming two new, identical (barring mutation) DNA double helices (each formed by complimenting the two original parental strands) 9. Please complete the following chart that compares and contrasts DNA and RNA molecules. Use the terms listed below to fill in the blanks. (8 marks) nucleus and cytoplasm nucleus only one two single stand double helix smaller molecule larger molecule ribose deoxyribose A, G, C, T A, G, C, U mRNA, tRNA, rRNA DNA only controls cell activities protein synthesis DNA RNA Location in cell nucleus only nucleus and cytoplasm Number of strands one two Shape of molecule Double strand Single strand Size of molecule Larger molecule Smaller molecule Sugar found in molecule deoxyribose ribose Nitrogenous bases A,G,C,T A,G,C,U Types DNA only mRNA, rRNA, tRNA Function Controls cell activities Protein synthesis Page 10 of 10