1 Supporting Information 2 Figure S1. The 252-bp DNA fragment upstream from the start codon of PAO is a 3 functional promoter. 4 (a) GUS activities of different transgenic lines driven by a series of 5’-truncated PAO 5 promoter fragments. Left panel: 1200-, 550-, 252- and 100-bp fragments upstream 6 from the start codon of PAO fused to the GUS gene. Col-0 and p35S:GUS transgenic 7 plants were controls. Right panel: GUS activities in plants with or without 48 hr of 8 dark treatment. Fold induction after dark treatment is on the right of columns. 9 (b) RT-qPCR of mRNA level of PAO in homozygous transgenic plants. RNA was 10 extracted from 5th and 6th detached leaves of each line. β-ACTIN2 was an internal 11 control. Data are means±SD of 2 independent experiments. *** P <0.001 comparing 12 transgenic plants and acd1-20 (t-tests). 13 (c) Chl contents in the detached leaves of different p252:PAO acd1-20 transgenic lines 14 as well as Col-0 and acd1-20 plants. Detached leaves of each genotype were treated in 15 darkness for five days, and their Chl contents were measured afterwards. 16 (d) HPLC examination of Chl catabolites in the leaves of p252:PAO acd1-20 #1 as 17 well as Col-0 and acd1-20 plants. Detached leaves from plants of each genotype were 18 dark-treated for 5 days. Pheide a, pheophorbide a; Chl a, chlorophyll a; Chl b, 19 chlorophyll b. 20 In (a) and (c), data are mean±SD of 3 biological replicates. * P <0.05, *** P <0.001 21 (t-tests). 22 23 Figure S2. The PAO promoter is responsive to MeJA treatment. 24 (a) p252:PAO acd1-20 #1 transgenic plants restored the stay-green phenotype of 1 25 acd1-20. The 5th and 6th detached leaves from 4-week-old Col-0, acd1-20 and 26 p252:PAO acd1-20 #1 transgenic plants were treated with or without 100 µM MeJA 27 for 4 days. 28 (b) Chl contents in detached leaves shown in (a). 29 (c) RT-qPCR of mRNA level of PAO in detached leaves shown in (a). β-ACTIN2 was 30 an internal control. 31 Data are mean±SD of 3 biological replicates. *** P <0.001 (t-tests). 32 33 Figure S3. Attached leaves of Col-0 and myc2myc3myc4 show a phenotype 34 concordant to those of their detached counterparts after MeJA treatment. 35 (a) Phenotypes of myc2myc3myc4 (myc2, 3, 4) as well as Col-0 plants after MeJA 36 treatment. 4-week-old plants of Col-0 and myc2, 3, 4 were treated with or without 37 1mM MeJA for 6 days before photographing. 38 (b) Chl contents in 5th and 6th rosette leaves of the plants shown in (a). Data are 39 mean±SD of 3 biological replicates. *** P <0.001 (t-tests). 40 41 Figure S4. Phenotypes of myc double mutants after MeJA treatment. 42 (a) Phenotypes of Col-0 and myc double mutant plants after MeJA treatment. 43 4-week-old plants of Col-0 and myc2myc3, myc2myc4, myc3myc4 mutants were 44 treated with or without 100 µM MeJA for 4 days. Images showed the 5th and 6th 45 detached leaves. 46 (b) Chl contents in the 5th and 6th rosette leaves shown in (a). Data are mean±SD of 3 47 biological replicates. *** P <0.001 (t-tests). 48 49 Figure S5. Overexpression of MYC2/3/4 accelerates Chl degradation upon MeJA 2 50 treatment. 51 (a) Acceleration of leaf yellowing by overexpression of MYC2, MYC3 or MYC4 after 52 MeJA treatment. Detached leaves of 35S:MYC2, 35S:MYC3 and 35S:MYC4 as well as 53 Col-0 and 35S:GFP were treated with or without 100 µM MeJA for 60 hr before 54 photographing. 55 (b) Chl contents in the detached leaves shown in (a). Different letters within each 56 treatment indicate significant differences at P <0.001 (one-way ANOVA). 57 (c) qRT-PCR analysis of mRNA level of PAO in the detached leaves shown in (a). 58 β-ACTIN2 was an internal control.** P <0.01, *** P <0.001(t-tests). 59 Data are mean±SD of 3 biological replicates. 60 61 Figure S6. Transcript levels of PAO in the inducible transgenic lines in WT and the 62 myc2myc3myc4 triple mutant backgrounds. 63 RT-qPCR analysis of mRNA level of PAO in each transgenic line in backgrounds of 64 Col-0 (a) and myc2myc3myc4 triple mutant (b). β-ACTIN2 was an internal control. 65 Data are mean±SD of 2 biological replicates. *** P <0.001 comparing WT and the 66 myc2myc3myc4 mutant (t-tests). 67 68 Figure S7. nolnyc1 mutant conferred a stay-green phenotype. 69 (a) Phenotypes of the detached leaves of nolnyc1, nol, nyc1 and Col-0 plants after 70 MeJA treatment. The 5th and 6th detached leaves of 4-week-old plants were treated 71 with or without 100 µM MeJA for 4 days. 72 (b) Chl contents in the detached leaves shown in (a). Data are mean±SD of 3 73 independent experiments. *** P <0.001 (t-tests). 74 3 75 Figure S8. ANAC019/055/072 are the targets of MYC2 76 (a) RT-PCR analysis of mRNA level of ANAC019/055/072 in myc2myc3myc4 (myc2, 77 3, 4) after MeJA treatment. Experimental details were as in Figure 2a. Data are 78 mean±SD of 3 biological replicates. 79 (b) Association of MYC2-GFP fusion protein with ANAC019 promoter in planta. 80 ChIP product was as described in Figure 1c. Distinct regions examined in the 81 ChIP-qPCR assay are indicated under the respective column charts."-", upstream of 82 ATG. Data are mean±SD of 2 independent experiments. *** P <0.001 (t-tests). 83 84 Figure S9. In vitro pull-down assays of MYC2 and ANAC019. 85 About 50µg purified MBP and MBP-MYC2 proteins were mixed with the same 86 amount of purified GST-ANAC019 proteins from E.coli and used as input for the 87 pull-down assay. GST agarose beads and amylose beads were used to pull down 88 MYC2 (a) and ANAC019 (b). The input and pull-down samples were then detected 89 with MBP antibody (a) or GST antibody (b).The purified GST-ANAC019 and MBP 90 and MBP-MYC2 proteins were stained with Coomassie blue. 91 92 Figure S10. MYC2 and ANAC019 respectively regulate the expression of PAO and 93 NYE2. 94 MYC2 (a) and ANAC019 (b) regulate the expression of PAO and NYE2 in transient 95 dual luciferase assays in Arabidopsis protoplasts. Col-0 protoplasts were 96 co-transformed with the pPAO:LUC reporter (a) or pNYE2:LUC reporter (b) construct 97 and 35S:MYC2 and/or 35S:ANAC019 effector constructs. Vector, empty vector 98 control. Data are mean±SD from 2 biological replicates. *** P <0.001(t-tests). 99 4 100 S1Table. Primers used in this study. 5