167 167 158 158 158 167 158 158 167 167 167 167 167 158 158 158 155 155 155 155 155 147 147 147 160 155 155 160 160 129 129 129 405 405 405 380 405 405 405 380 380 380 380 396 396 380 380 380 156 152 152 152 152 156 143 143 156 156 156 156 152 143 143 143 128 128 118 118 118 118 118 128 128 118 118 128 128 118 118 118 171 171 159 159 159 171 159 159 171 171 171 171 171 159 159 159 162 162 155 155 155 167 167 155 167 183 183 167 183 162 162 172 61 61 61 61 61 59 61 61 69 61 61 81 73 73 81 73 318 318 318 318 318 318 318 318 318 333 333 318 333 318 318 318 233 233 204 204 204 233 204 204 233 233 233 233 233 204 204 204 337 345 337 337 337 330 337 330 330 343 337 337 337 337 337 337 222 222 239 239 239 222 239 239 222 222 222 222 222 239 239 239 175 175 160 160 160 175 160 160 175 175 175 175 175 160 160 160 233 233 204 204 204 233 204 204 233 233 233 233 233 204 204 204 241 241 271 271 271 241 271 271 241 241 241 241 241 271 271 271 151 151 148 148 148 151 148 148 151 151 151 151 151 148 148 148 262 262 97/130 97/130 97/130 262 97/130 97/130 262 262 262 262 262 97/130 97/130 97/130 338 345 338 330 338 345 345 345 345 345 345 330 345 330 330 345 127 152 142 142 142 152 173 142 152 152 152 146 146 146 146 146 SC23 RM23902 RM23901 RM8300 RM23805 RM23679 GnS2 IYT3 IYT1 Sub1AB1 Sub1BC3 Sub1BC2 Sub1BC1 Sub1C173 ART5 ART3 SC41 RM23843 RM23915 RM23778 Lakhi Saita Kalojoma DG1-349 DSL-78-8 Laldepa Putidepa Damsi FR13A IR64-Sub1 Ciherang-Sub1 BRRI dhan51 BRRI dhan52 Samba Mahsuri BRRI dhan49 BR5 338 345 338 330 338 345 345 345 345 345 345 330 345 330 330 345 + + + SUB1 SUB1 SUB1 SUB1 SUB1 - Suppl. Figure S2: Allelic diversity of 16 genotypes across 20 loci in the SUB1 QTL vicinity. The data in the shadowed boxes represent the same alleles of FR13A. The presence of SUB1 by previous confirmation using markers or by inference is also indicated as ‘SUB1’ and the ‘+’ signs, respectively. Seeds of the check varieties BR5, BRRI dhan49, BRRI dhan51, and BRRI dhan52 were from the nucleus seed stock of the Plant Breeding Division, Bangladesh Rice Research Institute (BRRI); Ciherang-Sub1 (released as BINA dhan11) and IR64-Sub1 were from the International Rice Research Institute (IRRI); while seeds of FR13A (the pure line selection from Dhullaputia, a landrace grown in Orissa, India) were from genebank of BRRI. The rest of the accessions are from the collection of the genebank of BRRI.