1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 Development of a Fe3O4 nano-particle modified silica monolith in centrifugal spin column format for enrichment of phosphorylated compounds. Ali Alwya, Sarah P. Clarkeb, Dermot F. Broughamb, Brendan Twamleyc, Brett Paulld, Blanaid Whitea,c, and Damian Connolly*a,e aIrish Separation Science Cluster, National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin 9, Ireland. bNational Institute for Cellular Biotechnology, School of Chemical Sciences, Dublin City University, Dublin 9, Ireland. cSchool of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland. dAustralian Centre for Research on Separation Science, School of Chemistry, University of Tasmania, Hobart 7001, Tasmania, Australia. ePharmaceutical and Molecular Biotechnology Research Centre, Department of Chemical and Life Sciences, Waterford Institute of Technology, Waterford, Ireland. Telephone: +353 (51) 845509, Email: dconnolly@wit.ie 17 18 Electronic Supplementary Information 19 20 21 Figure S1: Dynamic light scattering data for determination of size distribution of 22 prepared iron oxide nano-particles. 23 1 24 25 Figure S2: Digital photograph (looking down the sample well) of an aminated silica 26 monolith after coating with citrate-stabilised iron oxide nano-particles. 27 28 29 30 Figure S3: EDX spectrum of an aminated silica MonoSpin with immobilised iron 31 oxide nano-particles (single layer). 2 32 33 Figure S4: (a): Molecular structure of poly(diallyldimethylammonium) chloride. (b): 34 Schematic representation of layer-by-layer assembly of negatively charged nano- 35 particles using a positively charged linear polymer. 36 37 38 39 40 Figure S5: EDX spectrum of an aminated silica MonoSpin with immobilised iron 41 oxide nano-particles (layer-by-layer coating). 42 43 Chromatographic method development and method validation for LC 44 separation of selected nucleotides. 45 In order to evaluate the selectivity of the nano-structured monolith for 46 phosphorylated compounds, a range of nucleotides, namely adenosine, AMP, 47 ADP and ATP were selected for study. It was anticipated that adenosine would 3 48 display little or no selectivity for the iron oxide surface during a solid phase 49 extraction protocol since it bears no phosphate groups. Therefore, a liquid 50 chromatographic ion-pair assay was developed for the separation of 51 adenosine, AMP, ADP and ATP using TBAP as ion-pair reagent and a Waters 52 Symmetry C18 column. The optimised gradient separation of a 5 µM standard 53 of adenosine and the three nucleotides is shown below (Fig. S6). The linear 54 range of the method was 100 nM to 250 µM for all four analytes with R2 values 55 ≥ 0.9980. Concentrations of nucleotides at the low, mid-level and high end of 56 the linear range were used for a precision study; namely 100 nM, 1 µM and 50 57 µM. Six consecutive injections of each standard were made and %RSD was ≤ 58 0.4 % for retention time and ≤ 0.4 % for peak area at each concentration level 59 (except at 100 nM, which was ≤ 3.9 %). Sensitivity (limit of detection, LOD) of 60 the method was taken as the concentration of each analyte which gave a 61 signal to noise ratio of 3, and determined to be 10 nM for each analyte. The 62 limit of quantitation (LOQ) was 100 nM. 63 64 4 65 66 Figure S6: Optimised separation of a 5 µM standard (a) of adenosine, AMP, ADP 67 and ATP overlaid with a blank injection (b). Chromatographic conditions: Column: 68 4.6 mm x 75 mm Waters Symmetry C18, 3.5 µm. Mobile phase A: 5 mM TBAP (pH 69 7.0) in 5 % ACN. Mobile phase B: 5 mM TBAP (pH 7.0) in 80 % ACN. Gradient 70 programme: 0-5 mins: 0% B, 5-15 mins: 0-50% B, 15-20 mins: 50 % B, 20.0-20.5 71 mins: 50-0% B and 20.5-30 mins: 0 % B. Flow rate: 0.4 mL/min. Injection volume: 40 72 µL. Column temperature: 40 73 adenosine, (2): AMP, (3): ADP, (4): ATP. oC. Detection wavelength: 254 nm. Peaks: (1): 74 75 76 77 78 79 80 81 82 83 84 85 86 5 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 Figure S7: (A): HPLC analysis of the water rinse fraction from a Fe3O4 nanoparticle 105 modified MonoSpin (a) and a blank MonoSpin (b). (B): HPLC analysis of the eluted 106 fraction phosphate buffer from a Fe3O4 nanoparticle modified MonoSpin (a) and a 107 blank MonoSpin (b). Chromatographic conditions and peak assignments as in Figure 108 S6. 109 6