Water Resources Research Supporting Information for Effects of alongshore morphology on groundwater flow and solute transport in a nearshore aquifer Ying Zhang1, Ling Li1, Dirk V.Erler2, Isaac Santos2, David Lockington1 1School 2Centre of Civil Engineering, The University of Queensland, St. Lucia, QLD, Australia for Coastal Biogeochemistry, School of Environmental Science and Management, Southern Cross University, Lismore, NSW, Australia Contents of this file Text S1 to S2 Figures S1 to S5 Tables S1 Introduction Six additional simulations were conducted to assess (1) whether the agreement with data could be improved by adjusting parameters other than hydraulic conductivity and allowing heterogeneity, and (2) correspondingly the effects of these factors on groundwater flow and solute transport in the studied system. In addition, the 3D simulation results were compared with the predictions of a 2D model to identify the limitations of the 2D model in simulating groundwater hydrodynamics in nearshore aquifers where complex beach morphology and hydraulic conditions exist. Please note these discussions are aimed to address how the parameters affect the agreement with data and 3D features rather than conducting a rigorous sensitivity analysis (which is not the purpose of the present paper). 1 Text S1. Six additional simulations (Table S1) were conducted to examine the effects of six parameters on the groundwater level fluctuations and salt distribution. The six parameters included four properties of the aquifer (porosity, dispersivity, capillary fringe and heterogeneity), the inland hydraulic head and tidal oscillations. The simulated water table fluctuations were compared with the recorded data (Figure S1). The averaged salinity distribution given by each model was used to explore the effects of these factors on threedimensional saline plumes in the aquifer (Figure S2). The value for aquifer porosity was reduced to 0.3 (Case 1), which is a typical value for sands [Das, 2008]. The smaller porosity slightly intensified groundwater table fluctuations in landward piezometers (i.e. R1 and R3 in Figures S1a and S1b). This is because a decrease in porosity reduces the value of wave number and weakens the dampening of tide-induced groundwater wave (water table fluctuations). The porosity value also affected the development of relatively salty plumes (Figure S2a). The saline plume bounded by the 30 ppt isoconcentration line penetrated deeper compared to its counterpart in the base case. As a smaller porosity increases the pore water flow velocity, the advective solute transport is enhanced. Simulation results (Case 2) showed that the parameter a in the saturation-capillary pressure relationship had negligible effects on the water table fluctuations and salinity distribution. When the value of a was decreased from 14.5 m-1 to 4 m-1, the amplitude of groundwater table fluctuation had a minor increase due to capillary rise (around 1 cm, Figure S1). The averaged salinity distribution was very similar to the one in the base case (Figure S2b). The longitudinal dispersivity affected the sea water intrusion and the development of saline plumes. The longitudinal dispersivity was decreased to 0.25 m (Case 3) and 0.1 m (Case 7). Compared with the salinity distribution in the base case, small dispersivity value resulted in a further intrusion of the cross-shore saltwater wedge (2 ~ 3 m landward, Figures S2c and S2g). The saline plume bounded by the 30 ppt isoconcentration line had a three-dimensional expansion, indicating an intensified 2 density-dependent flow locally. The averaged salinity distributions simulated with 𝛼𝐿 = 0.25 m and 𝛼𝐿 = 0.1 m were very similar to the base case results except that the saline plume bounded by the 30 ppt isoconcentration line expanded further downward. To capture the effects of instantaneous surface waves, the measured tidal data was specified as seaward boundary instead of the synthetic signal in Case 4. For the piezometer in the intertidal zone (R7), the model could replicate the rapid surface pressure changes (Figure S1e). However, the under-prediction of water levels at R6 and R13 remained. In addition, the averaged salinity distribution under measured tidal data was very similar to the one under the synthetic signal. As the base case over-predicted the mean water table in the landward zone, the inland head was decreased to 0.8 m to achieve a better agreement with the measured water levels at R1 and R3 (Case 5). With a smaller inland head, the saltwater wedge intruded further (Figure S2e). However, the creek-originated saline plume did not change significantly. We also considered the possible heterogeneity of the studied aquifer. A two-layer soil stratigraphy was considered with the lower layer (below z = -6 m) set to be more conductive (5 times larger than the calibrated conductivity) (Case 6). Simulation results showed that the amplitudes of water level fluctuations increased because the overall conductivity was increased (Figure S1). As a constant inland head was specified, the increased conductivity caused an increase in the inland flux. Consequently, the saltwater wedge retreated (seaward) and the creek-originated saline plume was reduced (Figure S2f). It can be inferred that the creek-originated saline plume expands and the saltwater wedge intrudes further inland when the lower layer is less conductive. In summary, the agreement between the simulation results and data could not be approved significantly by adjusting other model parameters than hydraulic conductivity and allowing a two-layer soil structure to represent the aquifer heterogeneity. In particular, all the simulated cases under-predicted the water level fluctuations at R6 and R13 and could not replicate the salinity value at the sampling ports. However, the 3 simulated results provided useful information about the effects of these factors on flow and solute transport processes in this nearshore groundwater system. More detailed geological survey is required. A flux-controlled creek boundary may also match the reality better. The additional work is beyond the scope of the present paper but points to directions for future research. Text S2. The 3D simulations showed that the alongshore morphological variations, including the creek, influenced the tide-induced pore water flow in the modelled system significantly. The effects are not represented and cannot be simulated by the 2D model. Here, we explore further the differences between the simulation results given by the 3D and 2D models. The comparisons were made with a focus on pore water flow and water fluxes across the interface along the 2011 and 2012 transects, respectively. The setup of the 2D model was based on cross-vertical sections along these two transects with the same parameter values employed in the 3D model. The phase-averaged salinity distributions and flow fields along the 2011 transect were computed over a spring tidal cycle (Figure S3). The differences between salinity distributions predicted by the 2D model and 3D model were mainly in following three aspects: in the 3D model (1) the groundwater beneath the upper saline plume was more saline; (2) the width of the saltwater wedge was enlarged and (3) the groundwater discharging zone was wider. Although both the 2D model and the 3D model predicted upper saline plumes of a similar extent and around a similar location, the salinity of discharging groundwater beneath the upper saline plume was around 5 ppt in 2D model, while in the 3D model the salinity of discharging groundwater reached 15 ppt, even in the area landward of the high tide mark (x < -5 m). The creek-driven alongshore flow appeared to inhibit the cross-shore seawater intrusion at the bottom of the aquifer, resulting in a more seaward wedge toe in the 3D model than that in the 2D model. Local net fluxes were also compared between the 2D and 3D simulation results (Figure S4). Some similar trends were predicted by both models: tidally driven seawater infiltration occurred landward of x = 0 m, peak outflow around x = 2.5 m and fresh groundwater outflow of the same order of magnitude in the 2D and 3D models. However, the amount 4 of seawater outflow simulated by the 3D model was much larger despite a similar amount of local seawater inflow predicted (again indicating contribution of alongshore flow and salt transport). The comparison along the 2012 transect (Figure S5) showed very different flow behaviors and salinity distributions. In the 3D model, the seaward dispersion zone was much wider and the saltwater wedge toe intruded the aquifer 30 m further landward. The increased saltwater intrusion was due to the alongshore salt transport caused by the combined effects of the tide and creek. A further evidence of the alongshore salt transport was a high concentration saline plume formed within the saltwater wedge around x = -5 m. This feature could not be explained on the basis of cross-shore processes and thus was not simulated by the 2D model. In the 2D model, the discharging groundwater above the SW was largely originated the landward boundary. In the 3D model, the discharge location was shifted seaward, and the sources of discharging water were from both the freshwater input through the landward boundary and saltwater that infiltrated the beach surface and the creek boundary. As the setup of the 2D model was based on the assumption of a perpendicular transect to the shoreline with the neglect of alongshore variability, it is not capable of simulating any features associated with the alongshore flow and solute transport, especially in the near-creek area where the 2012 transect was located. References Das, B. M. (2008), Advanced soil mechanics, 3rd ed., xxvi, 567 p. pp., Taylor & Francis, London ; New York. 5 Figure S1. Comparison of simulated heads and measured heads. 6 Figure S2. Averaged salinity distribution over a spring-neap tidal cycle with iso-surfaces of specified salinities shown. 7 Figure S3. Compasison of phase-averaged salinity distributions and flow fields between the 2D model and 3D model along the 2011 transect. Vectors show the mean flow fields. Dash lines indicate the mean sea level. 8 Figure S4. Simulated phase-averaged fluxes across the beach surface by the 2D and 3D models. Figure S5 Comparison of phase-averaged salinity distributions and flow fields between the 2D model and 3D model along the 2012 transect. Vectors show the mean flow fields. Table S1. Summary of additional simulation cases. Considered parameter Value Value in base case Case 1 Porosity 0.3 0.65 Case 2 Parameter a in equation (4b) 4 m-1 14.5 m-1 Case 3 Longitudinal dispersivity 0.25 m 0.5 m Case 4 Tidal signal Measured tides Synthetic tides Case 5 Inland head -0.6 m 0.2 m Case 6 Heterogeneity Two layers with different Homogeneity hydraulic conductivities Case 7 Longitudinal dispersivity 0.1 m 0.5 m 9