All the bullet points in this handout have been awarded a mark on A level mark schemes at some stage. This handout shows the level of information you must give in your answers and what the examiners are looking for. As the number of AS exams completed increases I will add to the document making it a better resource to revise from. General You will in the exam get questions on unfamiliar topics! This is so you can apply principles you have learnt into novel situations. Components of a Triglyceride Phosphoric acid/phosphate Glycerol Fatty acid Protein Structure (Specific) primary structure / order of amino acids; (Specific) tertiary / 3D structure; (So) Only binds to / fits / complementary to one (antigen); Haemoglobin The haemoglobins are a group of chemically similar molecules found in many different organisms. Haemoglobin is a protein with a quaternary structure. Protein has primary structure / amino acid sequence; Therefore bonds always form in same position; quaternary structure – haemoglobin incorporates ions for oxygen transport Carbohydrates The structure of b-glucose as and the linking of b-glucose by glycosidic bonds formed by condensation to form cellulose. The basic structure and functions of starch, glycogen and cellulose and the relationship of structure to function of these substances in animals and plants. Starch: helical shape provides compact store (in plants); insolubility linked to storage (osmotically inactive), large size does not pass through membrane, provides large number of glucose molecules for respiration. Glycogen: similar to starch but more branches, insoluble storage compound in liver and muscles (mammals). Conversion of glucose to glycogen for storage. Importance of control of blood glucose, more branches so broken down quicker Cellulose: long straight chains of glucose molecules, OH groups of chains linked by hydrogen bonds forming microfibrils / macrofibrils. Layers of fibrils orientated in different directions are interwoven and embedded in a matrix - providing rigid cell wall; gaps in layers provide permeability. Cells There are fundamental differences between plant cells and animal cells. The structure of a palisade cell from a leaf as seen with an optical microscope. The appearance, ultrastructure and function of • cell wall Cellulose Long chains of monomers/glucose/sugars/Straight chains; Chains cross link by (hydrogen) bonds; Chemically stable / inert / insoluble. Function: support / strength / shape / prevents osmotic lysis; Role of Hydrogen bonds in Cellulose 1. Holds chains/cellulose molecules together/forms cross links between chains/cellulose molecules/forms microfibrils; 2. Providing strength/rigidity (to cellulose/cell wall); 3. Hydrogen bonds strong in large numbers; Starch Helical /spiral/coiled - Compact / description e.g. ‘tightly packed’; Insoluble - Prevents osmosis/uptake of water / does not affect water potential / (starch) does not leave cell; Large molecule / long chain - Does not leave cell; Test for non-reducing sugars test for reducing sugar first; boil/heat with acid; neutralise with alkali/sodium hydrogen carbonate heat with Benedict’s (solution); blue to orange colour change indicates non-reducing sugars Digestion of starch overview Amylase Starch Amylase; (Starch) to maltose: Maltase; Maltose to glucose; Hydrolysis; (Of) glycosidic bond; Maltase Maltose Glucose Microscropy Electron microscope has greater resolution (can distinguish between objects close together) Because wavelength of electron beam smaller TEM Advantages: 1 Small objects can be seen; 2 TEM has high resolution; 3 Wavelength of electrons shorter; Limitations: 4 Cannot look at living cells; 5 Must be in a vacuum; 6 Must cut section / thin specimen; 7 Preparation may create artefact 8 Does not produce colour image; Differences between prokaryotic and eukaryotic ribosomes Eukaryotic ribosomes denser/heavier (not just ‘larger’) Prokaryotes v Eukaryotes Any two from No membrane-bound organelles/no mitochondria / no golgi/ no endoplasmic reticulum/etc; Any two from Capsule/flagellum/plasmid / cell wall/etc; Preparing a sample of organelles Homogenise; in ice cold; Reduce/prevent enzyme activity; isotonic solution; Maintain concentrations/water potential same inside and outside prevent osmosis; Prevent bursting/shrinkage organelles (not cells) then centrifuge Structure of the membrane Phospholipids and proteins Phospholipid bilayer Arrangement of phospholipid molecules ‘tails to tails’ ”Floating protein molecules”/molecules can move in membrane Intrinsic proteins extend through bilayer Extrinsic proteins in outer layer only Detail of channel proteins/glycoproteins Mitochondria (Mitochondria) use aerobic respiration; Mitochondria produce ATP/release energy; Energy/ATP required for muscles (to contract); Facilitated diffusion Movement from high to lower concentration Use of carrier/channel protein Proteins specific Changes shape of protein and passes through channel/membrane No energy/ATP needed Active transport Movement against concentration gradient Use of carrier/intrinsic/pump proteins Protein specific (to ion) Energy/ATP required Energy used to change shape of proteins/attach ion to protein Ions moved through membrane as proteins change shape/position Differences between active transport and diffusion Active transport Diffusion May move substances against concentration gradient; Requires ATP/energy; Requires membrane proteins/carriers Substances moved down concentration gradient; Does not require ATP/energy; Does not (necessarily) require membrane proteins/carriers Active transport Active transport requires energy/uses ATP; Moves substances against concentration gradient Mechanism of active transport Carrier protein (in membrane); (reject: extrinsic protein, or just ‘protein’); Molecule transported by change of shape/’flipping’ of carrier protein; Energy used to attach molecule to carrier protein/change shape. (not just ‘ATP provides energy’). How the structure of DNA is related to its function sugar – phosphate backbone gives strength; coiling gives compact shape; sequence of bases allows information to be stored; long molecule stores large amount of information; information can be replicated exactly because of complementary base pairing; (double helix protects) weak hydrogen bonds/double helix makes molecule stable/prevents code being corrupted; Weak hydrogen bonds/chains can split for replication/transcription. Mitosis Chromosomes become shorter/condense/coiling Nuclear membrane disappears Spindle formation The chromosomes arrange on equator of the spindle Centromeres attach to spindle; Centromeres divide; Chromatids pulled apart; Role of spindle fibres Chromatids moved to opposite poles Uncoiling/elongation; (DNA) replication; formation of another chromatid DNA replication (semi conservative replication) DNA strands separate/hydrogen bonds are broken (a labelled diagram could show this); Each strand forms a template/is copied/one new strand and one old ( a labelled diagram could show this); Complementary base pairing; Genes and polypeptides A gene occupies a fixed position, called a locus, on a particular strand of DNA. Genes are sections of DNA that contain coded information as a specific sequence of bases. Genes code for polypeptides that determine the nature and development of organisms. A sequence of three bases, called a triplet, codes for a specific amino acid. The base sequence of a gene determines the amino acid sequence in a polypeptide. Change in (sequence of) amino acids/primary structure; Change in hydrogen/ionic/disulfide bonds; Alters tertiary structure/active site (of enzyme); Substrate cannot bind / no enzyme-substrate complexes form; In eukaryotes, much of the nuclear DNA does not code for polypeptides. There are, for example, introns within genes and multiple repeats between genes. Differences in base sequences of alleles of a single gene may result in non-functional proteins, including non-functional enzymes. Allele - (Different) form/type/version of a gene / different base sequence of a gene Intron - Region of non-coding DNA / degenerate DNA; DNA and chromosomes In eukaryotes, DNA is linear and associated with proteins. In prokaryotes, DNA molecules are smaller, circular and are not associated with proteins. Meiosis The importance of meiosis in producing cells which are genetically different, caused by: • the formation of haploid cells • independent segregation of homologous chromosomes. Gametes are genetically different as a result of different combinations of maternal and paternal chromosomes • genetic recombination by crossing over. Meiosis is important because: Meiosis halves the number of chromosomes; chromosome number is halved/haploid; allowing a constant number/diploid to be restored by fertilisation/over generations; Introduces variation; Correct reference to natural selection / survival; Compare Mitosis and Meiosis Mitosis chromosome number remains same / cells produced diploid cells produced identical / no variation in cells produced only one division/2 cells produced somatic/ body cell formation/ used in AR/growth Meiosis chromosome number halved / cells produced haploid cells produced not identical / variation in cells produced two divisions / 4 cells produced used in gamete formation / reproductive cell formation / occurs in gonads/named gonad (reject occurs in gametes) Effect of cancer drugs Prevents/slows DNA replication/doubling; Prevents/slows mitosis; New strand not formed / nucleotides(of new strand) not joined together / sugar-phosphate bonds not formed; Reasons why eggs are larger than sperm Larger amount of food can be stored; For development of embryo Structure of egg Cytoplasm of egg contains yolk/food stores Needed for nourishment/development of (embryo/zygote) Differences between trna and mrna tRNA short chain versus mRNA long chain tRNA clover leaf shape versus mRNA straight chain tRNA folded versus mRNA straight tRNA fixed length versus mRNA variable length tRNA held together with hydrogen bonds versus mRNA straight molecule Polypeptide Synthesis Sequence of bases is the code; 3 bases code for one amino acid; DNA strands separate/Hydrogen bonds break; Producing mRNA/transcription (linked to mRNA production); Uracil replaces thymine; Role of RNA polymerase; Complementary base pairing; mRNA small enough to leave nucleus and enter cytoplasm; mRNA attaches to ribsome/rER; tRNA bring specific amino acid; anticodons of tRNA complementary to codons on mRNA/ translation; amino acids join by peptide bonds/condensation reaction; tRNA then free to pick up another amino acid Mutations change in code/base sequence; detail eg substitution/addition/deletion; of base(s); different amino acid(s) inserted into protein/polypeptide. Causes of mutation High energy ionised particles/X-rays/ultraviolet light/high energy radiation/uranium/plutonium/gamma rays/tobacco tar/ caffeine/pesticides/mustar gas/base analogues/free radicals; (reject radiation) Effect of mutation Change in the sequence of nucleotides/bases/addition/deletion/substitution; Changed order of amino acids/different protein/different tertiary; structure; Inactive enzyme if shape of active site is changed/enzyme-substrate complex does not form; Reliability Repeat the results using same method/use someone else’s results Anomalies to be identified / effect of anomalies to be reduced / effect of variation in data to be minimised; A mean to be calculated; Importance of repeats (Allows) anomalies to be identified / ignored / effect of anomalies to be reduced / effect of variation in data to be minimised; Makes the average / mean / line of best fit more reliable / allows concordant results; Use of percentage change Allows comparison / shows proportional change; Idea that cylinders have different starting masses / weights; Reliable data Large sample / wide range (of individuals tested); Random (sampling); Tested at different times/more than once; Mean/average value determined; Idea of establishing a range for the normal concentration / reference to use of standard deviation; Selecting volunteers Consider: 1. Sex/gender; 2. Lifestyle; 3. Body mass; 4. Health; 5. Ethnicity; 6. Genetic factors / family history;