Vanderbilt Antibody and Protein Resource Vanderbilt Antibody and Enzyme Repository Available via the Molecular Biology Core (http://thecore.vanderbilt.edu/) MYC Binding Sepharose Resin Antibody Type: Recombinant antibody Isotype: N/A Immunogen: MYC 9E10 Lot: 130628 Lot Binding Capacity: 0.5mg/ml settled resin Formulation: 50% slurry of resin in PBS + 0.5% Sodium Azide APPLICATIONS Assay Recommended Concentration ELISA No WB No IP IF IHC 1ml settled No No resin per 0.5mg target protein Note: Optimal dilutions should be established by the end user. These concentrations are intended as a guide. LIGAND COUPLING STABILITY AND TARGET ELUTION EFFICIENCY Elution Conditions Reducing buffer + Boiling Non-reducing buffer+ Boiling Low pH: Glycine pH 2.0 High salt: 3.6 M MgCl Magnetic Beads Bound Ligand Leakage 1-3% Target Elution Efficiency (i.e. MYC) 100% Sepharose Beads Bound Ligand Leakage <0.05% Target Elution Efficiency (i.e. MYC) 100% <1% ~75-95% < 0.005% ~75-95% <2% ~25-35% BDL ~25-35% BDL ~15-20% BDL ~15-20% Bound ligand leakage = the estimated percentage of MYC protein that will be present in the elute using the indicated elution conditions. Target Elution Efficiency = the estimated percentage of bound MYC target protein that was eluted using the indicated elution conditions. MYC eluted using Reducing buffer + boiling was considered 100%, all others were quantified relative to this condition. BDL= Below Detection Limits (0.001%) www.vanderbilt.edu/vapr Phone: 936-3092 Room: 892 PRB SUGGESTED PROTOCOL Note: The following is a standard Immunoprecipitation protocol and may need to be adjusted based on the user’s experimental conditions. The theoretical binding capacity is 4mg/ml of settled resin. However, in practice we have generally found the binding capacity to be approximately 0.5mg/ml of settled resin. Protocol 1. Thoroughly mix beads and storage buffer 2. Remove desired amount of resin (mixed resin:buffer is a 50:50 slurry) 3. Centrifuge resin slurry at 1,000 x g for 2 minutes 4. Remove storage buffer 5. Wash with 5 volumes of PBS where the volume represents amount of settled resin 6. Centrifuge resin slurry at 1,000 x g for 2 minutes 7. Remove PBS 8. Add in MYC containing lysate/buffer/etc. 9. Rotate end-over-end for 1 hour at room temperature or 2 hours at 4°C 10. Centrifuge sample at 1,000 x g for 2 minutes 11. Remove unbound protein in solution for use as flow-through sample 12. Wash beads with 5 volumes of PBS (or appropriate wash buffer) 13. Centrifuge resin slurry at 1,000 x g for 2 minutes 14. Remove wash buffer 15. Repeat steps 12 through 14 two times. If necessary retain washes to examine on SDS-PAGE. 16. Elution conditions will vary across experiments. Four different elution conditions have been tested in VAPR and their data is shown above on page 1. 17. If using Protein Gel Loading Buffer as the elution strategy add desired volume of Sample Loading Buffer and proceed with boiling and/or gel loading. 18. If eluting via Glycine or High Salt, a. add 3 volumes of elution buffer and incubate for 3 to 5 minutes. b. Centrifuge at 1,000 x g for 2 minutes c. Remove eluted sample. Please note that Glycine eluted samples with need to have their pH neutralized and High Salt eluted samples will need to be buffer exchanged before running on SDS-PAGE. REFERENCES STORAGE AND UTILIZATION Antibodies bound to solid matrices are provided in PBS with 0.05% Sodium azide. Stored at 4˚C, the solution will be stable for 6 months or longer. All VAPR products are quality tested and fully guaranteed. If you have any issues please contact us. www.vanderbilt.edu/vapr Phone: 936-3092 Room: 892 PRB