1 MONTGOMERY-TOWNSEND UNIVERSITY COURSE OF STUDY Date Revised: Fall 2011 INSTRUCTOR: Dr. Joanna Hoffman Office: SCI – 79 Phone: (555) 456-7825 E-mail: jhoffman@mtu.edu Course Number and Name: BIO 310 - Genetics Department/Program: Science Department/ Biology Semester Credit Hours: 4 Contact Hours per Week: Lecture: 3 Laboratory: 1 Prerequisite Courses: BIO 101 and BIO 202 Office Hours: Monday & Wednesday 2:30-5:30; Tuesday & Thursday 1:00-3:00 Appointments: Students may call or email the professor or may schedule an appointment. Please use email as your first line of communication with Dr. Hoffman. Class Meeting Location & Times: SCI 105; Tuesdays 6:00 PM to 9:00 PM Lab Meeting Location & Time: SCI 113; Thursdays 3:00 PM to 4:00 PM Nature of Students: Undergraduate Format of Course: Discussion, class participation, individual work, lab activities, review homework, practice homework, reading assignments, etc. Instruction will also include PowerPoints, video clips, and other related technology. Course Description: A combined lecture and laboratory course that serves as an introduction to the fundamentals of heredity including human traits, diseases, behavior, populations, and evolution. It includes principles of genetics, such as classical, molecular, and population genetics. This course stresses genetics as a foundation for other biological sciences. One semester hour of laboratory experience is included. 2 Labs associated with this course contain experiments and exercises that reinforce the principles introduced in lecture classes. Catalog Description: BIO 310. Genetics: (4 hours) An introduction to the essential principles of heredity with applications to human traits, diseases, behavior, populations, and evolution. A one semester hour laboratory experience is included. Prerequisite: BIO 101 and BIO 202. Course generally scheduled/offered: Every term at various times, in both traditional and nontraditional format with lab. STUDENT LEARNING OUTCOMES: Upon successful completion of this course, the student will be able to: 1. Identify and describe the stages of mitosis, meiosis, and the cell cycle, and explain the significance of each. 2. Understand the basic structure and function of chromosomes and how they relate to medicine and evolution. 3. Compare and contrast sexual and asexual reproduction and describe alternation of generations. 4. Explain and apply the laws of genetics. 5. Predict the outcome of crosses including the use of the Punnett square and apply chi square analysis to those predictions. 6. Design and explain an experiment that uses test crosses to determine genotypes and phenotypes. 7. Define sex-linked characteristics and describe their transmission. 8. Differentiate between sex-linked and sex-influenced characteristics. 9. Compare and contrast incomplete dominance and co-dominance and predict their modes of inheritance. 10. Trace the steps of DNA duplication, transcription into RNA, and the translation of RNA into proteins. 11. Translate a nucleic acid sequence into an amino acid sequence. 12. Describe the three ways bacteria can exchange genes and understand restriction endonucleases. 13. Identify and describe viruses that infect eukaryotes. Course requirements: Students are required to read the assigned chapters listed in the course schedule before the following class meeting. Students are required to participate in the weekly web review assignment. Students are required to complete one review and one practice activity each week (except on quiz weeks). These will count toward the homework percentage of the final grade, and it will also prepare the student for the upcoming lectures, quizzes, lab work, and final exams. REQUIRED TEXTS: Hartl, D.L. & Jones, E.W. (2006) Essential genetics: A genomics perspective. Sudbury, MA: Jones and Bartlett Publishers. 3 TENTATIVE COURSE PLAN: Week Date Assigned Reading and Web Review Assignments Due 1 08/23/11 None 2 08/30/11 3 09/06/11 Chapter 1: The Genetic Code of Genes and Genomes http://www.ndsu.nodak.edu/instruct/mcclean/plsc431/ mendel/mendel5.htm Chapter 2: Transmission of Genetics http://www.mhhe.com/biosci/genbio/life/articles/article2 6.mhtml Chapter 3: The Chromosomal Basis of Heredity http://learn.genetics.utah.edu/ 4 09/13/11 Chapter 4: Gene Linkage and Genetic Mapping http://anthro.palomar.edu/biobasis/default.htm Sex Linkage Review, Crossover and Mapping Practice Activity 5 09/20/11 Quiz covering weeks 1-4 6 09/27/11 7 10/04/11 Chapter 5: Human Chromosomes and Chromosomal Behavior http://www.becominghuman.org/node/chromosomeconnection Chapter 6: DNA Structure, Replication, and Manipulation http://learn.genetics.utah.edu/content/labs/pcr/ Chapter 7: The Genetics of Bacteria and Their Viruses http://www.pbs.org/wnet/secrets/previous_seasons/ca se_plague/clues.html 8 10/11/11 9 10/18/11 10 10/25/11 11 11/01/11 12 11/08/11 13 11/15/11 14 11/29/11 15 12/05/11 16 12/12/11 Monohybrid and Dihybrid Review, Meiosis and Mitosis Practice Mendelian Law Review, Transmission Practice Lab Assignment Introduction to Heredity Build a DNA Molecule Activity Genotype, Phenotype, Dominance and Expression Lab quiz covering weeks 1-3 Chromosome Matching Activity DNA Structure Review, DNA Replication Practice Activity PCR Activity Bacterial DNA Review, Virus Activity Extracting Bacteria DNA Activity Chapter 8: The Molecular Genetics of Gene Expression http://learn.genetics.utah.edu/content/epigenetics/ Chapter 9: Molecular Mechanisms of Gene Regulation http://glencoe.mcgrawhill.com/sites/0078759864/student_view0/unit3/chapter 12/virtual_labs.html# Chapter 10: Genomics, Proteomics, and Genetic Engineering http://www.pbs.org/ wgbh/harvest/ Chapter 11: The Genetic Control of Development http://learn.genetics.utah.edu/content/labs/extraction/ Mid-term exam covering weeks 17 Mid-term lab exam covering weeks 1-7 Gene Regulation and Mutation Lab Chapter 12: Molecular Mechanisms of Mutation and DNA Repair http://www.ncbi.nlm.nih.gov/books/NBK22183/ Chapter 13: Molecular Genetics of the Cell Cycle and Cancer http://learn.genetics.utah.edu/content/labs/gel/ Chapter 14: Molecular Evolution and Population Genetics http://www.dnapolicy.org/images/issuebriefpdfs/FDA_ Regulation_of_Genetic_Test_Issue_Brief.pdf Chapter 15: The Genetic Basis of Complex Inheritance http://learn.genetics.utah.edu/content/addiction/ Concept clarification will begin one hour before class to help you prepare for the final examination. Everyone is invited to come for extra help. None Mutation Review, Damage Beyond Repair Practice Activity Modifications Review, X-ing Out the Gene Practice Activity Genetic Engineering Review, Genetic Engineering of Food Critical Thinking Practice Practice Quiz covering weeks 5-10 DNA Extraction Activity DNA, mRNA, and tRNA Review, Gene Cycle Practice Activity Tracking Grizzly Bears Lab Lab quiz covering weeks 8-11 Gel Electrophoresis Natural Selection Review, Resistance in the Blood Practice Activity The Human Genome Project Trait and Population Distribution Review, The Human Connection Practice Activity Comprehensive final exam Comprehensive lab exam 4 GRADING: Grades and evaluations will be made using the following criteria: 20% Lecture Quizzes 20% Lab Quizzes 20% Review Homework 20% Practice Homework 10% Mid-term Lecture and Lab Exam 10% Final Lecture and Lab Exam Course Grade Scale: 90-100 = A; 80-89 = B; 70-79 = C; 60-69 = D; 59 and below = F INSTRUCTIONS FOR ADDITIONAL ASSISTANCE: Students needing assistance should make an appointment with the instructor to utilize the learning center located in student support services. REASONABLE ACCOMMODATIONS: If a student has a disability of any kind that requires assistance or reasonable accommodations in the classroom or laboratory, see the instructor as soon as possible then see the office of Americans with Disabilities Act, Dr. Barty Watts, at (555) 456-1000. ACADEMIC INTEGRITY: Every MTU student is expected to uphold the policies and procedures as defined in the student code of conduct and the University’s Policies and Procedures manual. A full explanation of the policies is available in the student handbook and online. Students are expected to read and familiarize themselves with all policies and procedures as related to academic integrity at MTU. Failure to adhere to these policies and procedures is considered a serious violation of MTU’s Academic Integrity Policy and will result in review by the student judiciary board as stated in the student handbook. MISSION STATEMENT: Montgomery Townsend University strives to cultivate discovery, expansion, transmission, and application of knowledge in an array of scholarly and professional disciplines. Its duty of delivering superior quality undergraduate and graduate programs is indivisible from its task of creating new understandings through experimentation and ingenuity. Montgomery Townsend University prepares students for roles in leadership, responsibility, and service to the community. The institution supports freedom of inquiry and a collegial environment fostering the development of the human mind and soul. It welcomes and seeks to serve a progressively diverse population in a global economy. While being guided by our mission, Montgomery Townsend University seeks to maintain its reputation as a competitive and respected institution of higher learning. ATTENDANCE POLICY: Attendance at all class meetings and labs in expected. Students may not miss more than 25% of class. This means no more than two lecture classes may be missed and no more than two lab classes may be missed. Any student who misses more than the maximum 25% of class will not receive credit. Students are 5 excused from class only if the absence is deemed excused by the Dean of Student Services. Tardies of more than 15 minutes will result in an absence. Two tardies of less than 15 minutes will result in one absence. Leaving class more than 15 minutes early will result in an absence. Leaving class twice, less than 15 minutes early, will result in one absence. LAB ATTENDANCE POLICY: There is no option for making up missed labs; therefore, attendance is critical. If you miss a lab, it will be reflected in your lab quiz grades. Two missed labs will result in the removal from course. MAKE-UP POLICY: Students are encouraged not to miss class. Students will only be allowed to make-up quizzes and exams if the Dean of Student Services has excused the absence. Late homework will not be accepted; homework assignments must be submitted online through D2L no later than the due date. DISASTER PLAN: Class closure due to emergencies or disasters will be made up according to the MTU’s Natural Disaster Policy. Information regarding closures will be posted on MTU’s website: www.mtu.edu, as well as sent via media alerts. If possible, check BlackBoard postings for makeup assignment dates and times. Instructions for accessing BlackBoard can be found on the MTU homepage. TOBACCO-FREE: MTU’s campus is tobacco-free. Failure to abide by this policy will result in disciplinary action. CELL PHONE POLICY: As a part of a scholarly community, each student has a responsibility to other students who are members of the community. When cellular phones or pagers ring and students respond in class or leave class to respond, it disrupts the class. Therefore, the use of cell phones, pagers, or similar communication devices is prohibited during scheduled classes. All such devices must be turned off or put in a silent (vibrate) mode and generally should not be in use during class. However, these same communication devices are a vital part of the institution’s emergency notification system; an exception to this policy would occur when the devices are being used for this purpose. Other exceptions to this policy may be granted at the discretion of the instructor. LECTURE RECORDING: Students are permitted and encouraged to record lectures electronically by tape recorders, cellular devices, or other methods. This has proven to be highly effective toward improving class performance. 6 Montgomery-Townsend University is an Equal Opportunity Employer and welcomes students and employees without regard to race, color, religion, national origin, sex, age, or qualified disability.